Or1f32 (olfactory receptor family 1 subfamily F member 32) - Rat Genome Database

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Gene: Or1f32 (olfactory receptor family 1 subfamily F member 32) Rattus norvegicus
Analyze
No known orthologs.
Symbol: Or1f32
Name: olfactory receptor family 1 subfamily F member 32
RGD ID: 1333886
Description: Predicted to enable olfactory receptor activity. Predicted to be involved in signal transduction. Predicted to be active in plasma membrane. Orthologous to human OR1F1 (olfactory receptor family 1 subfamily F member 1).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: olfactory receptor 1362; olfactory receptor gene Olr1362; olfactory receptor Olr1362; Olr1362
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81012,535,089 - 12,536,030 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1012,535,089 - 12,536,030 (-)EnsemblGRCr8
mRatBN7.21012,030,443 - 12,031,384 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1011,923,106 - 11,924,795 (+)EnsemblmRatBN7.2
mRatBN7.2 Ensembl1012,030,443 - 12,031,384 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1016,720,089 - 16,721,030 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01016,208,916 - 16,209,857 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01011,745,503 - 11,746,444 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01012,369,715 - 12,370,656 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1012,369,715 - 12,370,656 (-)Ensemblrn6Rnor6.0
Rnor_5.01012,194,533 - 12,195,474 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41012,236,741 - 12,237,682 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1011,755,379 - 11,756,320 (-)NCBICelera
RGSC_v3.11012,236,740 - 12,237,682 (-)NCBI
Cytogenetic Map10q12NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)
plasma membrane  (IBA,IEA)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Gibbs RA, etal., Nature 2004 Apr 1;428(6982):493-521.
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1840504  


Genomics

Variants

.
Variants in Or1f32
2 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:13
Count of miRNA genes:13
Interacting mature miRNAs:13
Transcripts:ENSRNOT00000060995
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2313095Bss62Bone structure and strength QTL 621.50.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)10589381150893811Rat
631660Hcar1Hepatocarcinoma resistance QTL 13.40.0001liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)10666111835509383Rat
8662860Vetf10Vascular elastic tissue fragility QTL 10artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)10666092373950353Rat
2313066Bss63Bone structure and strength QTL 631.40.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)10589381150893811Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10125055464349221Rat
2313064Bmd71Bone mineral density QTL 710.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)10589381150893811Rat
1578761Stresp21Stress response QTL 213.3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)10687714251877142Rat
2293680Bss40Bone structure and strength QTL 405.660.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)10135730538Rat
7387235Uae41Urinary albumin excretion QTL 415.260.1874urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)10130004247Rat
2313104Bss61Bone structure and strength QTL 610.90.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)10589381150893811Rat
61427Cia16Collagen induced arthritis QTL 163.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10686461896620484Rat
10401803Kidm50Kidney mass QTL 50kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1092219745922197Rat
2317754Glom25Glomerulus QTL 253.5urine protein amount (VT:0005160)urine protein level (CMO:0000591)10210370847103708Rat
2313081Bss64Bone structure and strength QTL 641.30.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)10589381150893811Rat
631828Alc5Alcohol consumption QTL 52.4consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)10117749933Rat
634327Hc4Hypercalciuria QTL 42.4urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)10138832698Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
endocrine system
endoderm
exocrine system
hepatobiliary system
mesenchyme
reproductive system
respiratory system
7 2 3 1 1 8 19 2

Sequence


Ensembl Acc Id: ENSRNOT00000060995   ⟹   ENSRNOP00000057714
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1012,535,089 - 12,536,030 (-)Ensembl
mRatBN7.2 Ensembl1012,030,443 - 12,031,384 (-)Ensembl
Rnor_6.0 Ensembl1012,369,715 - 12,370,656 (-)Ensembl
RefSeq Acc Id: NM_001006598   ⟹   NP_001006598
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81012,535,089 - 12,536,030 (-)NCBI
mRatBN7.21012,030,443 - 12,031,384 (-)NCBI
Rnor_6.01012,369,715 - 12,370,656 (-)NCBI
Rnor_5.01012,194,533 - 12,195,474 (-)NCBI
RGSC_v3.41012,236,741 - 12,237,682 (-)RGD
Celera1011,755,379 - 11,756,320 (-)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001006598 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA41752 (Get FASTA)   NCBI Sequence Viewer  
  AAC64589 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000057714
  ENSRNOP00000057714.1
  ENSRNOP00000097198.3
RefSeq Acc Id: NP_001006598   ⟸   NM_001006598
- UniProtKB: F1M9D1 (UniProtKB/TrEMBL),   A0A8I6AS86 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000057714   ⟸   ENSRNOT00000060995
Protein Domains
G-protein coupled receptors family 1 profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1M9D1-F1-model_v2 AlphaFold F1M9D1 1-313 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1333886 AgrOrtholog
BioCyc Gene G2FUF-25975 BioCyc
Ensembl Genes ENSRNOG00000047553 Ensembl
  ENSRNOG00000064298 Ensembl
  ENSRNOG00000070173 Ensembl
  ENSRNOG00000086932 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOG00000089067 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000060995 ENTREZGENE
  ENSRNOT00000060995.3 UniProtKB/TrEMBL
  ENSRNOT00000097679.3 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro 7TM_GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_supfam UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report rno:363546 UniProtKB/TrEMBL
NCBI Gene 363546 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PhenoGen Or1f32 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000047553 RatGTEx
  ENSRNOG00000064298 RatGTEx
  ENSRNOG00000070173 RatGTEx
  ENSRNOG00000086932 RatGTEx
  ENSRNOG00000089067 RatGTEx
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A8I6AS86 ENTREZGENE, UniProtKB/TrEMBL
  F1M9D1 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-08-16 Or1f32  olfactory receptor family 1 subfamily F member 32  Olr1362  olfactory receptor 1362  Symbol and Name Changed 1299863 APPROVED
2005-02-04 Olr1362  olfactory receptor 1362      Symbol and Name status set to approved 70820 APPROVED