Gene-Chemical Interaction Annotations Click to see Annotation Detail View
Object Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Or52m1 | Rat | 1,2-dimethylhydrazine | decreases expression | ISO | Or52m1 (Mus musculus) | 6480464 | 1 and 2-Dimethylhydrazine results in decreased expression of OR52M1 mRNA | CTD | PMID:22206623 | Or52m1 | Rat | 2,6-dinitrotoluene | affects expression | EXP | | 6480464 | 2 and 6-dinitrotoluene affects the expression of OR52M1 mRNA | CTD | PMID:21346803 | Or52m1 | Rat | aflatoxin B1 | increases methylation | ISO | OR52M1 (Homo sapiens) | 6480464 | Aflatoxin B1 results in increased methylation of OR52M1 gene | CTD | PMID:27153756 | Or52m1 | Rat | arsenite(3-) | decreases methylation | ISO | OR52M1 (Homo sapiens) | 6480464 | arsenite results in decreased methylation of OR52M1 promoter | CTD | PMID:23974009 | Or52m1 | Rat | benzo[a]pyrene | increases methylation | ISO | OR52M1 (Homo sapiens) | 6480464 | Benzo(a)pyrene results in increased methylation of OR52M1 promoter | CTD | PMID:27901495 | Or52m1 | Rat | bisphenol A | decreases expression | EXP | | 6480464 | bisphenol A results in decreased expression of OR52M1 mRNA | CTD | PMID:25181051 | Or52m1 | Rat | bisphenol A | increases methylation | EXP | | 6480464 | bisphenol A results in increased methylation of OR52M1 gene | CTD | PMID:28505145 | Or52m1 | Rat | bisphenol A | decreases methylation | ISO | OR52M1 (Homo sapiens) | 6480464 | bisphenol A results in decreased methylation of OR52M1 gene | CTD | PMID:31601247 | Or52m1 | Rat | CGP 52608 | multiple interactions | ISO | OR52M1 (Homo sapiens) | 6480464 | CGP 52608 promotes the reaction [RORA protein binds to OR52M1 gene] | CTD | PMID:28238834 | Or52m1 | Rat | chlorpyrifos | increases expression | ISO | Or52m1 (Mus musculus) | 6480464 | Chlorpyrifos results in increased expression of OR52M1 mRNA | CTD | PMID:32715474 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Gene Ontology Annotations Click to see Annotation Detail View
Biological Process
Cellular Component
Molecular Function
Phenotype Annotations Click to see Annotation Detail View
Mammalian Phenotype
Gene-Chemical Interaction Annotations
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Gene Ontology Annotations
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Biological Process
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Phenotype Annotations
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References
References - curated
| # | Reference Title | Reference Citation |
| 1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
| 2. | Genome sequence of the Brown Norway rat yields insights into mammalian evolution. | Gibbs RA, etal., Nature 2004 Apr 1;428(6982):493-521. |
| 3. | GOA pipeline | RGD automated data pipeline |
| 4. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
| 5. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
Genomics
Comparative Map Data
| Or52m1 (Rattus norvegicus - Norway rat) |
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| OR52M1 (Homo sapiens - human) |
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| Or52m1 (Mus musculus - house mouse) |
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| LOC100978707 (Pan paniscus - bonobo/pygmy chimpanzee) |
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| OR52M2 (Canis lupus familiaris - dog) |
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| LOC100516094 (Sus scrofa - pig) |
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Variants
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Variants in Or52m1
4 total Variants 
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