Olr1092 (olfactory receptor 1092) - Rat Genome Database

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Gene: Olr1092 (olfactory receptor 1092) Rattus norvegicus
Analyze
No known orthologs.
Symbol: Olr1092
Name: olfactory receptor 1092
RGD ID: 1332867
Description: Predicted to enable olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to be active in plasma membrane. Orthologous to several human genes including OR10H1 (olfactory receptor family 10 subfamily H member 1); INTERACTS WITH chlorpyrifos.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: olfactory receptor family 10 subfamily H member 1C, pseudogene 1; olfactory receptor gene Olr1092; olfactory receptor Olr1092; olfactory receptor pseudogene 1094; olfactory receptor pseudogene Olr1094-ps; Olr1094-ps; Or10h1c-ps1; ratchr7-14390639-14391593_ORF
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8713,127,862 - 13,128,818 (-)NCBIGRCr8
mRatBN7.2712,477,419 - 12,478,375 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2712,477,449 - 12,478,405 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl712,474,274 - 12,487,484 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx715,268,336 - 15,269,292 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0717,145,672 - 17,146,628 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0715,036,291 - 15,037,247 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0715,705,937 - 15,706,893 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0715,871,726 - 15,872,682 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4714,059,660 - 14,060,616 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1714,059,659 - 14,060,616 (-)NCBI
Celera710,561,617 - 10,562,573 (-)NCBICelera
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Olr1092Ratchlorpyrifos decreases methylationEXP 6480464Chlorpyrifos results in decreased methylation of OLR1092 geneCTDPMID:32905263


Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Olr1092Ratdetection of chemical stimulus involved in sensory perception of smell  IEARGD:51314831303377CREATED_DATE field changed to comply with GOC standards. Original CREATED_DATE: 2005-02-17RGD 
Olr1092Ratdetection of chemical stimulus involved in sensory perception of smell involved_inIBAMGI:106182|PANTHER:PTN0028180001600115GO_REF:0000033GO_CentralGO_REF:0000033
Olr1092RatG protein-coupled receptor signaling pathway  IEARGD:51314831303377CREATED_DATE field changed to comply with GOC standards. Original CREATED_DATE: 2005-02-17RGD 
Olr1092RatG protein-coupled receptor signaling pathway involved_inIEAInterPro:IPR000276|InterPro:IPR0007251600115GO_REF:0000002InterProGO_REF:0000002
Olr1092Ratsensory perception of smell involved_inIEAUniProtKB-KW:KW-05521600115GO_REF:0000043UniProtGO_REF:0000043
Olr1092Ratsignal transduction involved_inIEAUniProtKB-KW:KW-08071600115GO_REF:0000043UniProtGO_REF:0000043

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Olr1092Ratmembrane located_inIEAInterPro:IPR000276|InterPro:IPR000725|InterPro:IPR0174521600115GO_REF:0000002InterProGO_REF:0000002
Olr1092Ratmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
Olr1092Ratplasma membrane is_active_inIBAMGI:106648|PANTHER:PTN002818000|UniProtKB:Q8N628|UniProtKB:Q8NGE3|UniProtKB:Q8NGS8|UniProtKB:Q8NGS9|UniProtKB:Q8NGT0|UniProtKB:Q8NHC41600115GO_REF:0000033GO_CentralGO_REF:0000033
Olr1092Ratplasma membrane located_inIEAUniProtKB-KW:KW-10031600115GO_REF:0000043UniProtGO_REF:0000043
Olr1092Ratplasma membrane located_inIEAUniProtKB-SubCell:SL-00391600115GO_REF:0000044UniProtGO_REF:0000044

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Olr1092RatG protein-coupled receptor activity enablesIEAInterPro:IPR0002761600115GO_REF:0000002InterProGO_REF:0000002
Olr1092Ratolfactory receptor activity  IEARGD:51314831303377CREATED_DATE field changed to comply with GOC standards. Original CREATED_DATE: 2005-02-17RGD 
Olr1092Ratolfactory receptor activity enablesIEAInterPro:IPR0007251600115GO_REF:0000002InterProGO_REF:0000002
Olr1092Ratolfactory receptor activity enablesIBAMGI:106182|MGI:106648|MGI:3030792|MGI:3030794|MGI:3030795|PANTHER:PTN002818000|UniProtKB:Q8NHC41600115GO_REF:0000033GO_CentralGO_REF:0000033

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Olr1092Rattaste/olfaction phenotype  IEA 1303377 RGD 

#
Reference Title
Reference Citation
1. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Gibbs RA, etal., Nature 2004 Apr 1;428(6982):493-521.
2. GOA pipeline RGD automated data pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions


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Variants in Olr1092
7 total Variants

Predicted Target Of
Summary Value
Count of predictions:83
Count of miRNA genes:57
Interacting mature miRNAs:57
Transcripts:ENSRNOT00000042742
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 16 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
61410Bw19Body weight QTL 196.20.001body mass (VT:0001259)body weight (CMO:0000012)7144782185Rat
1300176Hrtrt10Heart rate QTL 103.19heart pumping trait (VT:2000009)heart rate (CMO:0000002)766427026029351Rat
9590102Sffal5Serum free fatty acids level QTL 58.620.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)7532901950329019Rat
1578652Bmd15Bone mineral density QTL 155.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)7986646760460686Rat
1643004Pain2Pain QTL 21mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)7946224698011544Rat
631503Bp102Blood pressure QTL 1021.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7144822433Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)7924703115097879Rat
10755438Coatc9Coat color QTL 90coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7352928048529280Rat
9590142Scort5Serum corticosterone level QTL 524.40.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)7131962314Rat
2298547Neuinf5Neuroinflammation QTL 53.7nervous system integrity trait (VT:0010566)spinal cord Cd74 protein level (CMO:0002131)7946224658265113Rat

1 to 10 of 16 rows





RefSeq Transcripts NM_001001380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000097999   ⟹   ENSRNOP00000088795
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl712,476,232 - 12,483,804 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000102527   ⟹   ENSRNOP00000090141
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl712,474,274 - 12,487,484 (-)Ensembl
RefSeq Acc Id: NM_001001380   ⟹   NP_001001380
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8713,127,862 - 13,128,818 (-)NCBI
mRatBN7.2712,477,449 - 12,478,405 (-)NCBI
Rnor_6.0715,705,937 - 15,706,893 (-)NCBI
Rnor_5.0715,871,756 - 15,872,712 (-)NCBI
RGSC_v3.4714,059,660 - 14,060,616 (-)RGD
Celera710,561,617 - 10,562,573 (-)RGD
Sequence:
Protein RefSeqs NP_001001380 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000088795.1
  ENSRNOP00000090141.1
  ENSRNOP00000099937
RefSeq Acc Id: NP_001001380   ⟸   NM_001001380
- UniProtKB: A0A8I6A788 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000088795   ⟸   ENSRNOT00000097999
Ensembl Acc Id: ENSRNOP00000090141   ⟸   ENSRNOT00000102527
G-protein coupled receptors family 1 profile


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 22 of 22 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-34777 BioCyc
Ensembl Genes ENSRNOG00000064395 Ensembl, UniProtKB/TrEMBL
  ENSRNOG00000073810 ENTREZGENE
Ensembl Transcript ENSRNOT00000097999.1 UniProtKB/TrEMBL
  ENSRNOT00000102527.1 UniProtKB/TrEMBL
  ENSRNOT00000121547 ENTREZGENE
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report rno:299570 UniProtKB/TrEMBL
NCBI Gene 299570 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PhenoGen Olr1092 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000064395 RatGTEx
  ENSRNOG00000073810 RatGTEx
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A8I6A788 ENTREZGENE, UniProtKB/TrEMBL
1 to 22 of 22 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-07-06 Olr1092  olfactory receptor 1092  Or10h1c-ps1  olfactory receptor family 10 subfamily H member 1C, pseudogene 1  Data merged from RGD:1333193 737654 PROVISIONAL
2022-08-16 Or10h1c-ps1  olfactory receptor family 10 subfamily H member 1C, pseudogene 1  Olr1094-ps  olfactory receptor pseudogene 1094  Symbol and Name Changed 1299863 APPROVED
2008-04-30 Olr1092  olfactory receptor 1092   Olr1092_predicted  olfactory receptor 1092 (predicted)  'predicted' is removed 2292626 APPROVED
2005-02-04 Olr1094-ps  olfactory receptor pseudogene 1094      Symbol and Name status set to approved 70820 APPROVED
2005-02-04 Olr1092_predicted  olfactory receptor 1092 (predicted)      Symbol and Name status set to approved 70820 APPROVED