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Gene: Etv1 (ETS variant transcription factor 1) Rattus norvegicus

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Symbol:

Etv1

Name:

ETS variant transcription factor 1

RGD ID:

1312007

Description:

Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in cell differentiation and positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including axon guidance; mechanosensory behavior; and positive regulation of DNA-templated transcription. Predicted to be active in nucleus. Orthologous to human ETV1 (ETS variant transcription factor 1); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

ETS translocation variant 1; ets variant 1; ets variant gene 1; LOC362733

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ETV1 (ETS variant transcription factor 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Etv1 (ets variant 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Etv1 (ETS variant transcription factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ETV1 (ETS variant transcription factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ETV1 (ETS variant transcription factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Etv1 (ETS variant transcription factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ETV1 (ETS variant transcription factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ETV1 (ETS variant transcription factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Etv1 (ETS variant transcription factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Etv1 (ETS variant transcription factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	SORBS1 (sorbin and SH3 domain containing 1)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	ETV1 (ETS variant transcription factor 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Etv1 (ets variant 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	etv1 (ets variant 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	etv1 (ets variant 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Ets96B	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	ets-7	Alliance	DIOPT (Ensembl Compara\|PhylomeDB)
Caenorhabditis elegans (roundworm):	ets-8	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Caenorhabditis elegans (roundworm):	ets-8	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	F19F10.1	Alliance	DIOPT (Ensembl Compara\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	etv1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	etv1	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	61,316,836 - 61,408,985 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	61,317,429 - 61,408,959 (+)	Ensembl				GRCr8
mRatBN7.2	6	55,590,149 - 55,681,784 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	55,590,234 - 55,681,775 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	55,892,952 - 55,981,990 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	56,207,859 - 56,296,899 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	55,660,923 - 55,752,453 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	58,467,215 - 58,558,640 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	58,467,254 - 58,558,631 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	68,061,085 - 68,152,530 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	57,674,561 - 57,766,401 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	54,687,578 - 54,778,854 (+)	NCBI		Celera
RGSC_v3.1	6	57,679,250 - 57,764,378 (+)	NCBI
Cytogenetic Map	6	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Colorectal Neoplasms (ISO)

Neoplastic Processes (ISO)

Prostatic Neoplasms (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-catechin (ISO)

1,1,1-trichloroethane (ISO)

1,1-dichloroethene (ISO)

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

17beta-estradiol (EXP,ISO)

17beta-hydroxy-5alpha-androstan-3-one (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4,4'-trichlorobiphenyl (ISO)

2,4-diaminotoluene (ISO)

3-methylcholanthrene (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

8-Br-cAMP (ISO)

acetamide (EXP)

acrolein (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

amitrole (EXP)

antimycin A (ISO)

arsenite(3-) (ISO)

azoxystrobin (ISO)

benzo[a]pyrene (ISO)

beta-hexachlorocyclohexane (ISO)

bicalutamide (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

butanal (ISO)

Butylbenzyl phthalate (ISO)

cadmium dichloride (EXP,ISO)

cadmium sulfate (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

carmustine (EXP,ISO)

CGP 52608 (ISO)

chloroprene (EXP)

chlorpyrifos (ISO)

Cuprizon (EXP)

DDE (ISO)

deguelin (ISO)

diallyl trisulfide (EXP)

diazinon (EXP)

dimethylarsinous acid (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

entinostat (ISO)

ethanol (ISO)

gemcitabine (ISO)

gentamycin (EXP)

geraniol (ISO)

lipopolysaccharide (ISO)

N,N-diethyl-m-toluamide (EXP)

nickel atom (ISO)

ochratoxin A (ISO)

oxaliplatin (EXP)

ozone (ISO)

panobinostat (ISO)

paracetamol (EXP,ISO)

paraquat (EXP)

PCB138 (ISO)

PD 0325901 (ISO)

perfluorononanoic acid (ISO)

permethrin (EXP)

phenylmercury acetate (ISO)

picoxystrobin (ISO)

potassium chromate (ISO)

progesterone (ISO)

pyrimidifen (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

tebufenpyrad (ISO)

temozolomide (ISO)

tetrachloroethene (ISO)

thifluzamide (ISO)

thiram (ISO)

titanium dioxide (ISO)

topotecan (EXP)

trichostatin A (ISO)

triclosan (ISO)

triptonide (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

axon guidance (ISO)

cell differentiation (IBA)

mechanosensory behavior (ISO)

muscle organ development (ISO)

positive regulation of DNA-templated transcription (IEA,ISO)

positive regulation of transcription by RNA polymerase II (ISO)

regulation of DNA-templated transcription (IEA)

regulation of transcription by RNA polymerase II (IBA,IEA)

Cellular Component

nucleus (IBA,IEA)

Molecular Function

DNA binding (IEA)

DNA-binding transcription activator activity, RNA polymerase II-specific (ISO)

DNA-binding transcription factor activity (IEA)

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (ISO)

sequence-specific DNA binding (IEA)

sequence-specific double-stranded DNA binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10850491	PMID:12477932	PMID:12750007	PMID:15466854	PMID:16394217	PMID:29967479

Genomics

Comparative Map Data

Etv1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	61,316,836 - 61,408,985 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	61,317,429 - 61,408,959 (+)	Ensembl				GRCr8
mRatBN7.2	6	55,590,149 - 55,681,784 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	55,590,234 - 55,681,775 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	55,892,952 - 55,981,990 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	56,207,859 - 56,296,899 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	55,660,923 - 55,752,453 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	58,467,215 - 58,558,640 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	58,467,254 - 58,558,631 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	68,061,085 - 68,152,530 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	57,674,561 - 57,766,401 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	54,687,578 - 54,778,854 (+)	NCBI		Celera
RGSC_v3.1	6	57,679,250 - 57,764,378 (+)	NCBI
Cytogenetic Map	6	q21	NCBI

ETV1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	13,891,229 - 13,991,425 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	13,891,229 - 13,991,425 (-)	Ensembl			hg38	GRCh38
GRCh37	7	13,930,854 - 14,031,050 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	13,897,379 - 13,995,289 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	7	13,708,329 - 13,803,555	NCBI
Celera	7	13,909,988 - 14,010,173 (-)	NCBI		Celera
Cytogenetic Map	7	p21.2	NCBI
HuRef	7	13,813,063 - 13,913,249 (-)	NCBI		HuRef
CHM1_1	7	13,930,444 - 14,030,782 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	14,023,217 - 14,123,457 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	13,981,766 - 14,081,945 (-)	NCBI

Etv1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	38,829,655 - 38,920,484 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	38,829,379 - 38,920,483 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	12	38,780,082 - 38,870,483 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	38,779,380 - 38,870,484 (+)	Ensembl			mm10	GRCm38
MGSCv37	12	39,506,845 - 39,594,802 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	12	39,290,733 - 39,377,695 (+)	NCBI		MGSCv36	mm8
Celera	12	40,201,449 - 40,290,056 (+)	NCBI		Celera
Cytogenetic Map	12	A3	NCBI
cM Map	12	17.99	NCBI

Etv1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955410	17,445,496 - 17,535,856 (-)	Ensembl
ChiLan1.0	NW_004955410	17,445,496 - 17,535,856 (-)	NCBI	ChiLan1.0	ChiLan1.0

ETV1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	18,747,512 - 18,846,758 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	67,072,035 - 67,171,476 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	14,569,239 - 14,665,713 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	13,909,487 - 14,004,879 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	13,909,487 - 14,004,808 (-)	Ensembl			panPan2	panpan1.1

ETV1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	14	28,665,264 - 28,760,919 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	14	28,669,697 - 28,760,887 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	14	28,183,292 - 28,279,652 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	14	28,575,452 - 28,672,016 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	14	28,575,516 - 28,670,323 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	14	28,666,811 - 28,763,517 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	14	28,397,940 - 28,494,416 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	14	28,710,474 - 28,806,040 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Etv1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	73,067,495 - 73,158,729 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936546	740,485 - 833,082 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936546	742,586 - 832,972 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ETV1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	83,322,823 - 83,418,902 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	9	83,322,818 - 83,567,136 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	91,502,612 - 91,602,294 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ETV1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	44,090,290 - 44,187,741 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	44,090,482 - 44,185,142 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666042	60,302,032 - 60,402,185 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Etv1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624739	15,943,495 - 16,029,785 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624739	15,943,534 - 16,031,704 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Etv1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	7	52,020,957 - 52,108,660 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Etv1
361 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	976
Count of miRNA genes:	310
Interacting mature miRNAs:	461
Transcripts:	ENSRNOT00000065396
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
9590290	Uminl2	Urine mineral level QTL 2	3.96	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	6	44510974	89510974	Rat
634318	Bw118	Body weight QTL 118	3.55		abdominal fat pad mass (VT:1000711)	abdominal fat pad weight (CMO:0000088)	6	39028659	63457441	Rat
4889933	Bss88	Bone structure and strength QTL 88	3.8		tibia size trait (VT:0100001)	tibia total bone volume (CMO:0001724)	6	53684921	98684921	Rat
10401812	Kidm54	Kidney mass QTL 54			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	6	20097635	65097635	Rat
634307	Bp141	Blood pressure QTL 141	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	6	40957564	85957564	Rat
1331743	Uae28	Urinary albumin excretion QTL 28	4.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	6	45153786	90153786	Rat
8552910	Pigfal5	Plasma insulin-like growth factor 1 level QTL 5	4.3		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	6	22653889	67653889	Rat
10401800	Kidm49	Kidney mass QTL 49			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	6	20097635	65097635	Rat
5684992	Bmd83	Bone mineral density QTL 82	4.8		tibia mineral mass (VT:1000283)	bone mineral content (CMO:0001554)	6	53684921	98684921	Rat
1331779	Rf38	Renal function QTL 38	2.876		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	6	31185002	76185002	Rat
737827	Hcar11	Hepatocarcinoma resistance QTL 11	4.4		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	6	46050607	116278722	Rat
724513	Uae14	Urinary albumin excretion QTL 14	6.5		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	46047353	91047353	Rat
2293839	Kiddil2	Kidney dilation QTL 2	4.8		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	26618314	86868070	Rat
1576309	Emca7	Estrogen-induced mammary cancer QTL 7	4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	6	20859430	113082285	Rat
9590140	Scort4	Serum corticosterone level QTL 4	14.49	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	44510974	89510974	Rat
2301964	Bp323	Blood pressure QTL 323	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	6	1	86868070	Rat
9590306	Scort18	Serum corticosterone level QTL 18	2.88	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	44510974	89510974	Rat
1578665	Bss16	Bone structure and strength QTL 16	4.4		femur morphology trait (VT:0000559)	bone trabecular cross-sectional area (CMO:0002311)	6	33328841	78328841	Rat
2293841	Kiddil4	Kidney dilation QTL 4	4.4		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	26618314	86868070	Rat
1641898	Colcr4	Colorectal carcinoma resistance QTL4	3.71	0.0007	intestine integrity trait (VT:0010554)	well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)	6	30937632	75937632	Rat
1578668	Bmd14	Bone mineral density QTL 14	3.8		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	6	33328841	78328841	Rat
6893340	Cm77	Cardiac mass QTL 77	0.26	0.57	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	6	39028659	86867923	Rat
5684963	Bss99	Bone structure and strength QTL 99	3.1		tibia area (VT:1000281)	tibia area measurement (CMO:0001382)	6	53684921	98684921	Rat
70199	Coreg1	Compensatory renal growth QTL 1	11.8		kidney mass (VT:0002707)	compensatory renal growth score (CMO:0001894)	6	14599473	63457687	Rat
2301972	Bp325	Blood pressure QTL 325	4.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	6	16089372	61967788	Rat
1354664	Slep2	Serum leptin concentration QTL 2	4.49		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	6	22288257	67288257	Rat
1300143	Rf14	Renal function QTL 14	2.92		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	6	40163183	85163183	Rat

Markers in Region

Etv1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	55,676,542 - 55,677,329 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	58,553,411 - 58,554,197	NCBI	Rnor6.0
Rnor_5.0	6	68,147,301 - 68,148,087	UniSTS	Rnor5.0
RGSC_v3.4	6	57,761,160 - 57,761,946	UniSTS	RGSC3.4
Celera	6	54,773,613 - 54,774,399	UniSTS
Cytogenetic Map	6	q21	UniSTS

BF386238

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	55,681,579 - 55,681,731 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	58,558,448 - 58,558,599	NCBI	Rnor6.0
Rnor_5.0	6	68,152,338 - 68,152,489	UniSTS	Rnor5.0
RGSC_v3.4	6	57,766,197 - 57,766,348	UniSTS	RGSC3.4
Celera	6	54,778,650 - 54,778,801	UniSTS
RH 3.4 Map	6	394.2	UniSTS
Cytogenetic Map	6	q21	UniSTS

MARC_7327-7328:992008337:1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	55,591,209 - 55,591,831 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	58,468,230 - 58,468,851	NCBI	Rnor6.0
Rnor_5.0	6	68,062,120 - 68,062,741	UniSTS	Rnor5.0
RGSC_v3.4	6	57,675,537 - 57,676,158	UniSTS	RGSC3.4
Celera	6	54,688,554 - 54,689,175	UniSTS
Cytogenetic Map	6	q21	UniSTS

Etv1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	55,591,248 - 55,591,739 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	58,468,269 - 58,468,759	NCBI	Rnor6.0
Rnor_5.0	6	68,062,159 - 68,062,649	UniSTS	Rnor5.0
RGSC_v3.4	6	57,675,576 - 57,676,066	UniSTS	RGSC3.4
Celera	6	54,688,593 - 54,689,083	UniSTS
Cytogenetic Map	6	q21	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	69	59	6	333	169	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108709	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001163156	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764647	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764648	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594219	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262097	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262098	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262099	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262100	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC168860	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BQ195622	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB547717	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB718897	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473947	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000065396 ⟹ ENSRNOP00000059718

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	61,317,429 - 61,408,959 (+)	Ensembl
mRatBN7.2 Ensembl	6	55,590,234 - 55,681,775 (+)	Ensembl
Rnor_6.0 Ensembl	6	58,467,254 - 58,558,631 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000091263 ⟹ ENSRNOP00000068767

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	6	58,468,155 - 58,553,701 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000135524 ⟹ ENSRNOP00000103142

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	61,321,752 - 61,404,291 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000138494 ⟹ ENSRNOP00000110357

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	61,321,440 - 61,404,359 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000146193 ⟹ ENSRNOP00000101720

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	61,319,161 - 61,404,693 (+)	Ensembl

RefSeq Acc Id:

NM_001108709 ⟹ NP_001102179

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	61,317,429 - 61,408,968 (+)	NCBI
mRatBN7.2	6	55,590,234 - 55,681,784 (+)	NCBI
Rnor_6.0	6	58,467,254 - 58,558,640 (+)	NCBI
Rnor_5.0	6	68,061,085 - 68,152,530 (+)	NCBI
RGSC_v3.4	6	57,674,561 - 57,766,401 (+)	RGD
Celera	6	54,687,578 - 54,778,854 (+)	RGD

Sequence:

show sequence

GACATTCTCGTTTCCAAACGTCCCATCATTGTCCTTGTAACCCGAGCCCTCCCTGCTCTCCCCC
CAACTTCTGGTTGGAAGAAGTGAAATCCTCAAGTACAGTTGATAGAAGTCCAGATCCCGAGGAA
ATCTGCAGCTAAATGCTCAAAATATAAAACACTGAGCTAGTATTTGAGAAGAGGAGCAGAATGG
ATGGATTTTATGACCAGCAAGTGCCTTACGTGGTCACCAACAGTCAGCGTGGGAGAAACTGTAC
CGAGAAACCAACAAATGTCAGGAAAAGAAAATTCATTAACAGAGATCTGGCTCATGATTCAGAA
GAACTCTTTCAAGATCTGAGTCAGTTACAAGAAACATGGCTTGCTGAAGCTCAGGTACCTGACA
ATGATGAGCAGTTTGTGCCAGACTATCAGGCCGAAAGTTTGGCTTTTCATGGCCTACCACTGAA
AATCAAGAAAGAACCCCACAGCCCATGTTCAGAACTCGGGTCTGCTTGCAGCCAAGAGCAGCCC
TTTAAATTCAGCTATGGAGAAAAGTGCCTGTACAATGTCAGTGCCTATGATCAGAAGCCACAAG
TGGGAATGAGGCCCTCCAATCCCCCAACACCATCCAGCACTCCAGTGTCCCCACTACATCATGC
ATCTCCAAACACAGCTCATACTCCGAAACCTGACCGGGCCTTCCCAGCTCACCTCCCGCCTTCC
CAGTCCATACCAGACAGCACCTACCCCATGGACCACAGATTTCGCCGCCAGCTTTCTGAACCCT
GTAACTCTTTCCCTCCTTTGCCAACAATGCCAAGGGAAGGGCGTCCTATGTACCAACGCCAGAT
GTCTGAGCCAAACATCCCCTTCCCACCACAAGGCTTCAAGCAGGAGTACCACGACCCAGTCTAT
GAACATACCACCATGGTTGGCGGTGCAGCCAGCCAAAGCTTTCCCCCTCCTTTGATGATCAAAC
AGGAACCCAGAGACTTTGCATATGATTCAGGCTGCATGTTTGAGAAGGGTCCCAGGCAGTTCTA
TGATGACACCTGTGTCGTCCCGGAGAAGTTCGATGGGGACATTAAGCAAGAGCCAGGAATGTAC
CGGGAAGGTCCCACGTACCAGAGGCGAGGATCGCTTCAGCTCTGGCAGTTTCTGGTAGCTCTTC
TGGATGACCCTTCAAATTCTCATTTTATTGCCTGGACTGGGCGAGGCATGGAATTTAAACTGAT
TGAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAGAACAGGCCAGCTATGAACTATGAC
AAACTTAGCCGTTCTCTCCGCTATTATTATGAGAAGGGAATCATGCAAAAGGTGGCTGGAGAAA
GATATGTCTACAAATTTGTGTGTGACCCGGAAGCCCTTTTCTCCATGGCCTTTCCGGATAATCA
GCGCCCCCTGCTGAAGACGGACATGGAACGTCACATCAACGAAGAGGACACGGTGCCCCTGTCT
CACTTTGATGAGAGCATGACCTACATGCCAGAAGGGGGCTGCTGCAACCCCCACCCTTACAACG
AAGGATACGTGTACTAACCTAACAGTCAAGCAAGGCACCCCGTGCTTCGCCTTTTTTTTTTTTT
CAAGATACAGAGAATCTCCGAATTCTCTTACAATGTTTGTTTTATTTCTGTTGTTTGTATTTTA
CTTTTTAAATAATAATACAAAAGGGGGCTTTTCCTGTTGCATTATTCTATGGTCTGCCATGGAC
TGCGCACTTTATTTGAGGGTGGGTGGGAATAATCTAGACATTCATTCTTTGTAACAGGAAGATG
GTGGGTGAACGGGCAGAGGGAGCTGAGGGATTCCTTTTTACTTAGGCTTGGGATGGGGTCCTAC
AGGTTTTCTGTATGATGAAGCTATATCATGTTTGTTCGATTTCTTAATAACGTAAGATAATTTT
CCCTGGGTATCTACGGTACAGTTGATTTCACGTTGTGTAAATATCTTCTTGGAGACCATTTGCC
TTGGGCATTTCCCCATCAGTACTGAGTCTCTGCAGGTGTACAAAAAAAAAAAAAAAATCTACTG
TAAATGGCAGTTTCATGTTAGAAATGACTGTTTTTGCACCTCTTGTAAAAAAAAGAAAAAAGAA
TATTTAGCAATTGCATTTGTTGTTCTTTCTGTTTCATACTGCTTTACAGATGACTTGTAGAGAA
TGACCATAAATGTGGGCAATTCTCTCAGAAGTTGAGTAATCCCCATAACTGTAAATGAGGGCCA
CAGTTTTGGACTCTGGCTCTAACTGAGTCACAGGCCAGTAGCATTACATGGATCTGGTGTCATC
TTGCTGTTTTGGTACTACAAGTACTGTCTTTTAAATATGTTGATGCCCATTTCACTTAAATAAT
GACATTCATGATCCTTTGGAATCTTCATGTAAGTGTTAAAGCTGGGATCACAATGAAGCAAAAA
AGAAAAAAGAAAAAAAAATGACCTGTCTCCTTTCACTATCTTCAGTACATAAATACATTATTTA
ATCAATAAGAATTAACTGTACTAAATCACATATTATGCTGTTCTAGTTACAGCCATCACTCTTT
AAGAAAAATATCCACTACACTAAATAGGTACTATAGTAATTTTTAGACATGGTACCATTGATAT
GCATCTAAATGTTTCACTGCTGTGTTCTGTTGATAACATATATAAATATTAGATAATGCTAATG
CTTCTGCTGCTGTCTTTTCTGTAATATTCTCTTTCATGCTGAATTTACTATGACCATTTATAAG
CAATGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGAGTCAAACCATTTATTGCTTA
AAAAATAGCTTACACCACGGTTACGCTCTAAGCAGCTTTTATGCACATTGACAAATGAAGAGTG
AGCCTGGGCTTGCTAAAGGAAACTGTGGAAACTTTTGTAACTTTTGGTGAAATGCAACATTGTT
TATGGACTGTTAAAGAGTATGAGGAAGTCGATGTGTGACGTAAGTGCTGGCACTGATGCTGTCC
TTCATCTCCTTTGGACACGCCTGTAAATGTGATTGGATTGTACGGAAGAAAAATTCAAACATCT
GAGATTTCAATGTTTCGGCCTTGTTTCCATTTTGTTTGATTGTTTGTTTGTTTTATTGTACACT
CTAAAACAACAGCATTGAACATGGGCCATGTGGTTTCATTCACTCTGAAAATCATAAGGAAATG
GTGTCTTAAGACCCCGCCCCCCCCAAGTAGCTGCTTACCAGATCCAAGCAAAGAAAATGAATTG
TGTTCACTCTGTTACTATTCTGGAAGAACAACTTTCATAAAGAATCTACAGGAAAACGTTACTG
CTTAGAATACCCTTAAAGCCCAAGTAAAGGGAGCATTTCAGCAGCACAAGAAGGAAATTGAGAA
GATGAGCCCTCAGCATCCTTTAGCCCATGTTCTGCAGATCACAGTTGTTTCTGTAACACAACAG
TTCCTTCATTCTCCACACGCACAAATCGACACTATCCACATGCTCCATAAATATTCTGATCCCT
GCAGATCTCTTTTATAAATGATTTCATTGACTGTGCTGCATGTGTTTCCCTTAGCCCTTCACGG
GCTGATAAGTATGCCTTAAAAATCAGGACAGCCACCATGATCATGTGGCTACTTACAGCACTTG
GAATTAAATGACTTTCTAAGTAACCAGTGAAATATTTATCGGATAGACACCCGAGATATATGAT
TGAGCTCTTGGTAAAATAGATAAATTCTAAGTGTGTCTTTAAATGTAAATCATATAGAGGAGTC
TTTTCTTTGTCTATAGTTCTTCCCCCTGCCCTTTTAATATTCTTGTTCTAGTCAGTCAGAGAGA
AAGATTCAGACTCTAAGTTGTTCTAAAGGATGAAAAGAAGAAAGATGTTAATTTTGATGTATAA
GAACAAGTATATTTCTTGTTGCAATAGGCAGTGTTTAAATGGACTATGTAAGTCATCAGCTAGC
ATTAAGTATTCCTAATAATAAAAATTTCAAAGTATAATATCATATACTTTAGAAAAATGAAAGG
TTTTATATTCTGATTTCTTTCTTTTTTTTTTCAGATTGACTAAAAATTCTAGTCACTGATGTTT
GCAAGATTATTGCATTTTGTATTTCAACTGCATTGGATACCAAGCATAGAAATTAGTGAAGCCA
TCTTTTTCTTTTCAGGTTATAAAAGAAATGTAAAGCTATATCCACTAGTGTGTGCTATCTCTAG
TTGAAGATGTGCATATACCCGACAACGTCATAAAACAAAGAATGTTACCTTCCAAATAAGTTAT
GAGAAATTATTTTCCTAGGGGTGCTTCAAAATCAAAATCCACATAACTGAGTGTGTAGTATTTC
TTCAAGCCCCAGAAGCCTTGCTTCCTCTAGATGCTATAACAAACTGCTCAGACTTGAGTAACTA
TACAAATTTACAATCTTGGAGGTCAGAATTTCAAAGTCAGCCTTAAAGGGCTAAAACCAAGATG
CTAGGAACACCACCACCTTTTGAAGGCTCCAGTGAGGCCTTGTTTCTTCCATTTTCTGGGGATG
TCAGTATTTCTTCACTCCTACTAACAACATTTCAATTTTGCCTCCCTTTTTTCCTGCGGTCACA
GATCCTTCTAGATTCCTGCAAGGACACTTTTTTTAGGGATAATTACACTTTTTTTAGGGATAAT
TTTAGGGATAATTACAGGTTAATCTTCCCCTCTTGCCATTCATGCTTATGTGCCATTTGTCCCT
TTGAACAGAGAAGCATTCATAGGTTCCTGGGTTTATGATGTGGCTATGGGGAAAATCTGGGAAA
GGTTTCTTATCCTGCTTTATTCAGTTTCCCACACAGCCAAAGACCCCAGAGAGCAAAATGCTAA
TTGATTAATTCATGGGCAAAAAGTTCTAAGATTAGTATGTGTGAAGGAGAATTGTCATTTATCA
TTCAGATTACCTCCCCTTACTTTGCATAAATACCTTTTAAAAAACTCGGCATGAAAATTCTCCT
ATTCCAGTAAATCATCTGGGTTATCACATCAAACCTTTATATGTTTTAAATATCCTTCCTCTCA
TAGTTAAACATGTTACGATAGGAAAAATAACCAACCTGTGAAAACTGCAATAGCACCGCTAAAA
TGATGCTCGTGCCATATTACGTTTTCAAAAAGCATTTGCTTCTTTATCATGAGTGAGTTCGTTC
TCCATGATTGTCAGATCTGCAAGTGATAACTACTAATTCACTAAGAATAATAAACAGAATATGC
TCTTCTTAATTAAAGGAACAATCCTAAAACCTGACTCGATTTCTTTTTATATTGCAGCAAAAAA
AATATTTCTTGACTGAAATCACAGTTTTTGAACTAGATTATAGACTTCTAAATTGAATCACGTT
TTCAACCATTCAGCCTTTCCAGATTATATAATGATGAAACATATTGGAAAACAAAAACAGTTGA
ATGCCAGTTGAGTCCTTAATTTTCTTTCCTTTCCTTTTTTTTTTTTTTTAATCTGAAACAAACA
AGAGATTTTCCAGGCACAGTTTGGCATGGCGAAGAAACATTAAAAGTGGGGGAAAAAAAGGGGG
GGAAGAATCAATTTATAGAAGGCAATTGCAAGAAGCATTTCGTAGAAGCCAAGTTCCTTAAAGA
TGTTTATGTTCCATTTAATACTAAAGAGATAGGTGCTGCCCGGGAGGGTGGAGAGAGGATGACT
GCTTTGTGTTCTTCGGAAAGCTGACCACATTTAGTGAGAACTGAACTGCTATTTTTAGGACTTT
ATTTTATTTTCTTAACTGAGACTAACTTAGAACCTTTAAAAAAAATATGGAAAAGTATAGTTAA
GAAGGAAAATCCGGCTAGACTAGTGGGTGCCTTTACAGAAATATTGATGATTTTGGAATGTTCA
ATGAAAATGCATATATAATAGCTGTGGTTTAAGAATCCATATATAAGGTAGGTTTTCTTTTCAC
ATATAAACTCCAATACTCTTACTTAGTTCTATTTGAAAATTAAGTTACTATGGGGAGGAATTTC
TTTTAAGTTTGCTTGGTTGTATTAAAATTATAATTACAGTTCGAGAAAACGTTATGAAATTCAT
GTGGTGATAGCAAATTAAATATGCTCAAAATTTAAGTCTAAAATAAAAGCCCAGAAATTGAAAA
TATTGGGTTGTCTTGATCACTCAGAATGGTGGCGCATTCAGACCCTGTGAATGGCATCTCAGTG
TTGCCAGCCTCTTAATGAGCTAAAGTTTGAATAATTTATGACTGAACTGTAATAATTCTGCACT
GCAGTCCTTTCTCCTTCCTCTCATTTTCTGAAGGATTCAGATATCATGATACTTAATACATTTT
TCCAGTTGTGTTCCAATTTCTTTAGACATATTTCATTAAATCTCAAGAAATGTGTTGAGGAGGA
ATAAAAGCAGAATTTGGGGACCCAACAAGAGCATGTGGCTTGTCTATACTGCCGCTACTGTGAC
TCGATTTGTCTAATGAGGTGACAAACTAGCAAATGTCATTGTGTTTGAGATGTCAGGAGATCAC
GAGTAGATTCCTAACTTGGGCATAGCTGTGTTCTTGATTTAGCTTCTCGTGATAAGAATTCCTA
TTGCAATTATGTTTTGCTGAACCCGTGTTTTGGTTGGTTGCTTGGTCTTACCTTTGGAACACTC
TTTGTAGGTAAATAAAGCACCATTTAAAACAACAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001163156 ⟹ NP_001156628

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	61,318,366 - 61,408,968 (+)	NCBI
mRatBN7.2	6	55,591,171 - 55,681,784 (+)	NCBI
Rnor_6.0	6	58,468,191 - 58,558,640 (+)	NCBI
Rnor_5.0	6	68,061,085 - 68,152,530 (+)	NCBI
RGSC_v3.4	6	57,674,561 - 57,766,401 (+)	RGD
Celera	6	54,688,515 - 54,778,854 (+)	NCBI

Sequence:

show sequence

CCGAATTCAGCTCTGTCAGAGGCGCTTTCGGCTTCCAAGGGGAAGTGCTGGGCAATAATTAATG
TTTTTATTAAATTTGGAGGGAATTTTTTGCAGCCGTTCGCCTAGCGTGGCCTTCAGGTTGATAG
AAGTCCAGATCCCGAGGAAATCTGCAGCTAAATGCTCAAAATATAAAACACTGAGCTAGTATTT
GAGAAGAGGAGCAGAATGGATGGATTTTATGACCAGCAAGTGCCTTACGTGGTCACCAACAGTC
AGCGTGGGAGAAACTGTACCGAGAAACCAACAAATGTCAGGAAAAGAAAATTCATTAACAGAGA
TCTGGCTCATGATTCAGAAGAACTCTTTCAAGATCTGAGTCAGTTACAAGAAACATGGCTTGCT
GAAGCTCAGGTACCTGACAATGATGAGCAGTTTGTGCCAGACTATCAGGCCGAAAGTTTGGCTT
TTCATGGCCTACCACTGAAAATCAAGAAAGAACCCCACAGCCCATGTTCAGAACTCGGGTCTGC
TTGCAGCCAAGAGCAGCCCTTTAAATTCAGCTATGGAGAAAAGTGCCTGTACAATGTCAGTGCC
TATGATCAGAAGCCACAAGTGGGAATGAGGCCCTCCAATCCCCCAACACCATCCAGCACTCCAG
TGTCCCCACTACATCATGCATCTCCAAACACAGCTCATACTCCGAAACCTGACCGGGCCTTCCC
AGCTCACCTCCCGCCTTCCCAGTCCATACCAGACAGCACCTACCCCATGGACCACAGATTTCGC
CGCCAGCTTTCTGAACCCTGTAACTCTTTCCCTCCTTTGCCAACAATGCCAAGGGAAGGGCGTC
CTATGTACCAACGCCAGATGTCTGAGCCAAACATCCCCTTCCCACCACAAGGCTTCAAGCAGGA
GTACCACGACCCAGTCTATGAACATACCACCATGGTTGGCGGTGCAGCCAGCCAAAGCTTTCCC
CCTCCTTTGATGATCAAACAGGAACCCAGAGACTTTGCATATGATTCAGAAGTGCCTAGCTGCC
ACTCCATTTATATGAGGCAAGAAAGCTTCCTGGCTCATCCAAGCAGAACAGAAGGCTGCATGTT
TGAGAAGGGTCCCAGGCAGTTCTATGATGACACCTGTGTCGTCCCGGAGAAGTTCGATGGGGAC
ATTAAGCAAGAGCCAGGAATGTACCGGGAAGGTCCCACGTACCAGAGGCGAGGATCGCTTCAGC
TCTGGCAGTTTCTGGTAGCTCTTCTGGATGACCCTTCAAATTCTCATTTTATTGCCTGGACTGG
GCGAGGCATGGAATTTAAACTGATTGAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAG
AACAGGCCAGCTATGAACTATGACAAACTTAGCCGTTCTCTCCGCTATTATTATGAGAAGGGAA
TCATGCAAAAGGTGGCTGGAGAAAGATATGTCTACAAATTTGTGTGTGACCCGGAAGCCCTTTT
CTCCATGGCCTTTCCGGATAATCAGCGCCCCCTGCTGAAGACGGACATGGAACGTCACATCAAC
GAAGAGGACACGGTGCCCCTGTCTCACTTTGATGAGAGCATGACCTACATGCCAGAAGGGGGCT
GCTGCAACCCCCACCCTTACAACGAAGGATACGTGTACTAACCTAACAGTCAAGCAAGGCACCC
CGTGCTTCGCCTTTTTTTTTTTTTCAAGATACAGAGAATCTCCGAATTCTCTTACAATGTTTGT
TTTATTTCTGTTGTTTGTATTTTACTTTTTAAATAATAATACAAAAGGGGGCTTTTCCTGTTGC
ATTATTCTATGGTCTGCCATGGACTGCGCACTTTATTTGAGGGTGGGTGGGAATAATCTAGACA
TTCATTCTTTGTAACAGGAAGATGGTGGGTGAACGGGCAGAGGGAGCTGAGGGATTCCTTTTTA
CTTAGGCTTGGGATGGGGTCCTACAGGTTTTCTGTATGATGAAGCTATATCATGTTTGTTCGAT
TTCTTAATAACGTAAGATAATTTTCCCTGGGTATCTACGGTACAGTTGATTTCACGTTGTGTAA
ATATCTTCTTGGAGACCATTTGCCTTGGGCATTTCCCCATCAGTACTGAGTCTCTGCAGGTGTA
CAAAAAAAAAAAAAAAATCTACTGTAAATGGCAGTTTCATGTTAGAAATGACTGTTTTTGCACC
TCTTGTAAAAAAAAGAAAAAAGAATATTTAGCAATTGCATTTGTTGTTCTTTCTGTTTCATACT
GCTTTACAGATGACTTGTAGAGAATGACCATAAATGTGGGCAATTCTCTCAGAAGTTGAGTAAT
CCCCATAACTGTAAATGAGGGCCACAGTTTTGGACTCTGGCTCTAACTGAGTCACAGGCCAGTA
GCATTACATGGATCTGGTGTCATCTTGCTGTTTTGGTACTACAAGTACTGTCTTTTAAATATGT
TGATGCCCATTTCACTTAAATAATGACATTCATGATCCTTTGGAATCTTCATGTAAGTGTTAAA
GCTGGGATCACAATGAAGCAAAAAAGAAAAAAGAAAAAAAAATGACCTGTCTCCTTTCACTATC
TTCAGTACATAAATACATTATTTAATCAATAAGAATTAACTGTACTAAATCACATATTATGCTG
TTCTAGTTACAGCCATCACTCTTTAAGAAAAATATCCACTACACTAAATAGGTACTATAGTAAT
TTTTAGACATGGTACCATTGATATGCATCTAAATGTTTCACTGCTGTGTTCTGTTGATAACATA
TATAAATATTAGATAATGCTAATGCTTCTGCTGCTGTCTTTTCTGTAATATTCTCTTTCATGCT
GAATTTACTATGACCATTTATAAGCAATGCAGTTAACTACAGATAGCATTTCAGGACAAAATAG
ATGAGTCAAACCATTTATTGCTTAAAAAATAGCTTACACCACGGTTACGCTCTAAGCAGCTTTT
ATGCACATTGACAAATGAAGAGTGAGCCTGGGCTTGCTAAAGGAAACTGTGGAAACTTTTGTAA
CTTTTGGTGAAATGCAACATTGTTTATGGACTGTTAAAGAGTATGAGGAAGTCGATGTGTGACG
TAAGTGCTGGCACTGATGCTGTCCTTCATCTCCTTTGGACACGCCTGTAAATGTGATTGGATTG
TACGGAAGAAAAATTCAAACATCTGAGATTTCAATGTTTCGGCCTTGTTTCCATTTTGTTTGAT
TGTTTGTTTGTTTTATTGTACACTCTAAAACAACAGCATTGAACATGGGCCATGTGGTTTCATT
CACTCTGAAAATCATAAGGAAATGGTGTCTTAAGACCCCGCCCCCCCCAAGTAGCTGCTTACCA
GATCCAAGCAAAGAAAATGAATTGTGTTCACTCTGTTACTATTCTGGAAGAACAACTTTCATAA
AGAATCTACAGGAAAACGTTACTGCTTAGAATACCCTTAAAGCCCAAGTAAAGGGAGCATTTCA
GCAGCACAAGAAGGAAATTGAGAAGATGAGCCCTCAGCATCCTTTAGCCCATGTTCTGCAGATC
ACAGTTGTTTCTGTAACACAACAGTTCCTTCATTCTCCACACGCACAAATCGACACTATCCACA
TGCTCCATAAATATTCTGATCCCTGCAGATCTCTTTTATAAATGATTTCATTGACTGTGCTGCA
TGTGTTTCCCTTAGCCCTTCACGGGCTGATAAGTATGCCTTAAAAATCAGGACAGCCACCATGA
TCATGTGGCTACTTACAGCACTTGGAATTAAATGACTTTCTAAGTAACCAGTGAAATATTTATC
GGATAGACACCCGAGATATATGATTGAGCTCTTGGTAAAATAGATAAATTCTAAGTGTGTCTTT
AAATGTAAATCATATAGAGGAGTCTTTTCTTTGTCTATAGTTCTTCCCCCTGCCCTTTTAATAT
TCTTGTTCTAGTCAGTCAGAGAGAAAGATTCAGACTCTAAGTTGTTCTAAAGGATGAAAAGAAG
AAAGATGTTAATTTTGATGTATAAGAACAAGTATATTTCTTGTTGCAATAGGCAGTGTTTAAAT
GGACTATGTAAGTCATCAGCTAGCATTAAGTATTCCTAATAATAAAAATTTCAAAGTATAATAT
CATATACTTTAGAAAAATGAAAGGTTTTATATTCTGATTTCTTTCTTTTTTTTTTCAGATTGAC
TAAAAATTCTAGTCACTGATGTTTGCAAGATTATTGCATTTTGTATTTCAACTGCATTGGATAC
CAAGCATAGAAATTAGTGAAGCCATCTTTTTCTTTTCAGGTTATAAAAGAAATGTAAAGCTATA
TCCACTAGTGTGTGCTATCTCTAGTTGAAGATGTGCATATACCCGACAACGTCATAAAACAAAG
AATGTTACCTTCCAAATAAGTTATGAGAAATTATTTTCCTAGGGGTGCTTCAAAATCAAAATCC
ACATAACTGAGTGTGTAGTATTTCTTCAAGCCCCAGAAGCCTTGCTTCCTCTAGATGCTATAAC
AAACTGCTCAGACTTGAGTAACTATACAAATTTACAATCTTGGAGGTCAGAATTTCAAAGTCAG
CCTTAAAGGGCTAAAACCAAGATGCTAGGAACACCACCACCTTTTGAAGGCTCCAGTGAGGCCT
TGTTTCTTCCATTTTCTGGGGATGTCAGTATTTCTTCACTCCTACTAACAACATTTCAATTTTG
CCTCCCTTTTTTCCTGCGGTCACAGATCCTTCTAGATTCCTGCAAGGACACTTTTTTTAGGGAT
AATTACACTTTTTTTAGGGATAATTTTAGGGATAATTACAGGTTAATCTTCCCCTCTTGCCATT
CATGCTTATGTGCCATTTGTCCCTTTGAACAGAGAAGCATTCATAGGTTCCTGGGTTTATGATG
TGGCTATGGGGAAAATCTGGGAAAGGTTTCTTATCCTGCTTTATTCAGTTTCCCACACAGCCAA
AGACCCCAGAGAGCAAAATGCTAATTGATTAATTCATGGGCAAAAAGTTCTAAGATTAGTATGT
GTGAAGGAGAATTGTCATTTATCATTCAGATTACCTCCCCTTACTTTGCATAAATACCTTTTAA
AAAACTCGGCATGAAAATTCTCCTATTCCAGTAAATCATCTGGGTTATCACATCAAACCTTTAT
ATGTTTTAAATATCCTTCCTCTCATAGTTAAACATGTTACGATAGGAAAAATAACCAACCTGTG
AAAACTGCAATAGCACCGCTAAAATGATGCTCGTGCCATATTACGTTTTCAAAAAGCATTTGCT
TCTTTATCATGAGTGAGTTCGTTCTCCATGATTGTCAGATCTGCAAGTGATAACTACTAATTCA
CTAAGAATAATAAACAGAATATGCTCTTCTTAATTAAAGGAACAATCCTAAAACCTGACTCGAT
TTCTTTTTATATTGCAGCAAAAAAAATATTTCTTGACTGAAATCACAGTTTTTGAACTAGATTA
TAGACTTCTAAATTGAATCACGTTTTCAACCATTCAGCCTTTCCAGATTATATAATGATGAAAC
ATATTGGAAAACAAAAACAGTTGAATGCCAGTTGAGTCCTTAATTTTCTTTCCTTTCCTTTTTT
TTTTTTTTTAATCTGAAACAAACAAGAGATTTTCCAGGCACAGTTTGGCATGGCGAAGAAACAT
TAAAAGTGGGGGAAAAAAAGGGGGGGAAGAATCAATTTATAGAAGGCAATTGCAAGAAGCATTT
CGTAGAAGCCAAGTTCCTTAAAGATGTTTATGTTCCATTTAATACTAAAGAGATAGGTGCTGCC
CGGGAGGGTGGAGAGAGGATGACTGCTTTGTGTTCTTCGGAAAGCTGACCACATTTAGTGAGAA
CTGAACTGCTATTTTTAGGACTTTATTTTATTTTCTTAACTGAGACTAACTTAGAACCTTTAAA
AAAAATATGGAAAAGTATAGTTAAGAAGGAAAATCCGGCTAGACTAGTGGGTGCCTTTACAGAA
ATATTGATGATTTTGGAATGTTCAATGAAAATGCATATATAATAGCTGTGGTTTAAGAATCCAT
ATATAAGGTAGGTTTTCTTTTCACATATAAACTCCAATACTCTTACTTAGTTCTATTTGAAAAT
TAAGTTACTATGGGGAGGAATTTCTTTTAAGTTTGCTTGGTTGTATTAAAATTATAATTACAGT
TCGAGAAAACGTTATGAAATTCATGTGGTGATAGCAAATTAAATATGCTCAAAATTTAAGTCTA
AAATAAAAGCCCAGAAATTGAAAATATTGGGTTGTCTTGATCACTCAGAATGGTGGCGCATTCA
GACCCTGTGAATGGCATCTCAGTGTTGCCAGCCTCTTAATGAGCTAAAGTTTGAATAATTTATG
ACTGAACTGTAATAATTCTGCACTGCAGTCCTTTCTCCTTCCTCTCATTTTCTGAAGGATTCAG
ATATCATGATACTTAATACATTTTTCCAGTTGTGTTCCAATTTCTTTAGACATATTTCATTAAA
TCTCAAGAAATGTGTTGAGGAGGAATAAAAGCAGAATTTGGGGACCCAACAAGAGCATGTGGCT
TGTCTATACTGCCGCTACTGTGACTCGATTTGTCTAATGAGGTGACAAACTAGCAAATGTCATT
GTGTTTGAGATGTCAGGAGATCACGAGTAGATTCCTAACTTGGGCATAGCTGTGTTCTTGATTT
AGCTTCTCGTGATAAGAATTCCTATTGCAATTATGTTTTGCTGAACCCGTGTTTTGGTTGGTTG
CTTGGTCTTACCTTTGGAACACTCTTTGTAGGTAAATAAAGCACCATTTAAAACAACAAAAAAA
AAAAAAAA

hide sequence

RefSeq Acc Id:

XM_008764647 ⟹ XP_008762869

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	61,319,143 - 61,408,985 (+)	NCBI
mRatBN7.2	6	55,591,956 - 55,681,227 (+)	NCBI
Rnor_6.0	6	58,468,972 - 58,558,638 (+)	NCBI

Sequence:

show sequence

TCTGCTTTGTTGCCACTGTAGGGCGACTCTGCTTCTAGAAGCCCTATCTACAAAATGAGCTTAC
CTTTGAGTGATTCGGATAAGGCACAGTTTTGTTTTAAGACCCCTTCTTCTGGTTAATGTGTCCA
CGATGAGTGCAAGAGGAGACGGAGGGCAGCAGCAGCTGCACTCAAAGTTTGTGGCTGGGTTTAT
CTGCCACATTGAAAAGAACGAAAGTCAGCGTGGGAGAAACTGTACCGAGAAACCAACAAATGTC
AGGAAAAGAAAATTCATTAACAGAGATCTGGCTCATGATTCAGAAGAACTCTTTCAAGATCTGA
GTCAGTTACAAGAAACATGGCTTGCTGAAGCTCAGGTACCTGACAATGATGAGCAGTTTGTGCC
AGACTATCAGGCCGAAAGTTTGGCTTTTCATGGCCTACCACTGAAAATCAAGAAAGAACCCCAC
AGCCCATGTTCAGAACTCGGGTCTGCTTGCAGCCAAGAGCAGCCCTTTAAATTCAGCTATGGAG
AAAAGTGCCTGTACAATGTCAGTGCCTATGATCAGAAGCCACAAGTGGGAATGAGGCCCTCCAA
TCCCCCAACACCATCCAGCACTCCAGTGTCCCCACTACATCATGCATCTCCAAACACAGCTCAT
ACTCCGAAACCTGACCGGGCCTTCCCAGCTCACCTCCCGCCTTCCCAGTCCATACCAGACAGCA
CCTACCCCATGGACCACAGATTTCGCCGCCAGCTTTCTGAACCCTGTAACTCTTTCCCTCCTTT
GCCAACAATGCCAAGGGAAGGGCGTCCTATGTACCAACGCCAGATGTCTGAGCCAAACATCCCC
TTCCCACCACAAGGCTTCAAGCAGGAGTACCACGACCCAGTCTATGAACATACCACCATGGTTG
GCGGTGCAGCCAGCCAAAGCTTTCCCCCTCCTTTGATGATCAAACAGGAACCCAGAGACTTTGC
ATATGATTCAGGCTGCATGTTTGAGAAGGGTCCCAGGCAGTTCTATGATGACACCTGTGTCGTC
CCGGAGAAGTTCGATGGGGACATTAAGCAAGAGCCAGGAATGTACCGGGAAGGTCCCACGTACC
AGAGGCGAGGATCGCTTCAGCTCTGGCAGTTTCTGGTAGCTCTTCTGGATGACCCTTCAAATTC
TCATTTTATTGCCTGGACTGGGCGAGGCATGGAATTTAAACTGATTGAGCCTGAAGAGGTGGCC
CGACGTTGGGGCATTCAGAAGAACAGGCCAGCTATGAACTATGACAAACTTAGCCGTTCTCTCC
GCTATTATTATGAGAAGGGAATCATGCAAAAGGTGGCTGGAGAAAGATATGTCTACAAATTTGT
GTGTGACCCGGAAGCCCTTTTCTCCATGGCCTTTCCGGATAATCAGCGCCCCCTGCTGAAGACG
GACATGGAACGTCACATCAACGAAGAGGACACGGTGCCCCTGTCTCACTTTGATGAGAGCATGA
CCTACATGCCAGAAGGGGGCTGCTGCAACCCCCACCCTTACAACGAAGGATACGTGTACTAACC
TAACAGTCAAGCAAGGCACCCCGTGCTTCGCCTTTTTTTTTTTTTCAAGATACAGAGAATCTCC
GAATTCTCTTACAATGTTTGTTTTATTTCTGTTGTTTGTATTTTACTTTTTAAATAATAATACA
AAAGGGGGCTTTTCCTGTTGCATTATTCTATGGTCTGCCATGGACTGCGCACTTTATTTGAGGG
TGGGTGGGAATAATCTAGACATTCATTCTTTGTAACAGGAAGATGGTGGGTGAACGGGCAGAGG
GAGCTGAGGGATTCCTTTTTACTTAGGCTTGGGATGGGGTCCTACAGGTTTTCTGTATGATGAA
GCTATATCATGTTTGTTCGATTTCTTAATAACGTAAGATAATTTTCCCTGGGTATCTACGGTAC
AGTTGATTTCACGTTGTGTAAATATCTTCTTGGAGACCATTTGCCTTGGGCATTTCCCCATCAG
TACTGAGTCTCTGCAGGTGTACAAAAAAAAAAAAAAAATCTACTGTAAATGGCAGTTTCATGTT
AGAAATGACTGTTTTTGCACCTCTTGTAAAAAAAAGAAAAAAGAATATTTAGCAATTGCATTTG
TTGTTCTTTCTGTTTCATACTGCTTTACAGATGACTTGTAGAGAATGACCATAAATGTGGGCAA
TTCTCTCAGAAGTTGAGTAATCCCCATAACTGTAAATGAGGGCCACAGTTTTGGACTCTGGCTC
TAACTGAGTCACAGGCCAGTAGCATTACATGGATCTGGTGTCATCTTGCTGTTTTGGTACTACA
AGTACTGTCTTTTAAATATGTTGATGCCCATTTCACTTAAATAATGACATTCATGATCCTTTGG
AATCTTCATGTAAGTGTTAAAGCTGGGATCACAATGAAGCAAAAAAGAAAAAAGAAAAAAAAAT
GACCTGTCTCCTTTCACTATCTTCAGTACATAAATACATTATTTAATCAATAAGAATTAACTGT
ACTAAATCACATATTATGCTGTTCTAGTTACAGCCATCACTCTTTAAGAAAAATATCCACTACA
CTAAATAGGTACTATAGTAATTTTTAGACATGGTACCATTGATATGCATCTAAATGTTTCACTG
CTGTGTTCTGTTGATAACATATATAAATATTAGATAATGCTAATGCTTCTGCTGCTGTCTTTTC
TGTAATATTCTCTTTCATGCTGAATTTACTATGACCATTTATAAGCAATGCAGTTAACTACAGA
TAGCATTTCAGGACAAAATAGATGAGTCAAACCATTTATTGCTTAAAAAATAGCTTACACCACG
GTTACGCTCTAAGCAGCTTTTATGCACATTGACAAATGAAGAGTGAGCCTGGGCTTGCTAAAGG
AAACTGTGGAAACTTTTGTAACTTTTGGTGAAATGCAACATTGTTTATGGACTGTTAAAGAGTA
TGAGGAAGTCGATGTGTGACGTAAGTGCTGGCACTGATGCTGTCCTTCATCTCCTTTGGACACG
CCTGTAAATGTGATTGGATTGTACGGAAGAAAAATTCAAACATCTGAGATTTCAATGTTTCGGC
CTTGTTTCCATTTTGTTTGATTGTTTGTTTGTTTTATTGTACACTCTAAAACAACAGCATTGAA
CATGGGCCATGTGGTTTCATTCACTCTGAAAATCATAAGGAAATGGTGTCTTAAGACCCCGCCC
CCCCCAAGTAGCTGCTTACCAGATCCAAGCAAAGAAAATGAATTGTGTTCACTCTGTTACTATT
CTGGAAGAACAACTTTCATAAAGAATCTACAGGAAAACGTTACTGCTTAGAATACCCTTAAAGC
CCAAGTAAAGGGAGCATTTCAGCAGCACAAGAAGGAAATTGAGAAGATGAGCCCTCAGCATCCT
TTAGCCCATGTTCTGCAGATCACAGTTGTTTCTGTAACACAACAGTTCCTTCATTCTCCACACG
CACAAATCGACACTATCCACATGCTCCATAAATATTCTGATCCCTGCAGATCTCTTTTATAAAT
GATTTCATTGACTGTGCTGCATGTGTTTCCCTTAGCCCTTCACGGGCTGATAAGTATGCCTTAA
AAATCAGGACAGCCACCATGATCATGTGGCTACTTACAGCACTTGGAATTAAATGACTTTCTAA
GTAACCAGTGAAATATTTATCGGATAGACACCCGAGATATATGATTGAGCTCTTGGTAAAATAG
ATAAATTCTAAGTGTGTCTTTAAATGTAAATCATATAGAGGAGTCTTTTCTTTGTCTATAGTTC
TTCCCCCTGCCCTTTTAATATTCTTGTTCTAGTCAGTCAGAGAGAAAGATTCAGACTCTAAGTT
GTTCTAAAGGATGAAAAGAAGAAAGATGTTAATTTTGATGTATAAGAACAAGTATATTTCTTGT
TGCAATAGGCAGTGTTTAAATGGACTATGTAAGTCATCAGCTAGCATTAAGTATTCCTAATAAT
AAAAATTTCAAAGTATAATATCATATACTTTAGAAAAATGAAAGGTTTTATATTCTGATTTCTT
TCTTTTTTTTTTCAGATTGACTAAAAATTCTAGTCACTGATGTTTGCAAGATTATTGCATTTTG
TATTTCAACTGCATTGGATACCAAGCATAGAAATTAGTGAAGCCATCTTTTTCTTTTCAGGTTA
TAAAAGAAATGTAAAGCTATATCCACTAGTGTGTGCTATCTCTAGTTGAAGATGTGCATATACC
CGACAACGTCATAAAACAAAGAATGTTACCTTCCAAATAAGTTATGAGAAATTATTTTCCTAGG
GGTGCTTCAAAATCAAAATCCACATAACTGAGTGTGTAGTATTTCTTCAAGCCCCAGAAGCCTT
GCTTCCTCTAGATGCTATAACAAACTGCTCAGACTTGAGTAACTATACAAATTTACAATCTTGG
AGGTCAGAATTTCAAAGTCAGCCTTAAAGGGCTAAAACCAAGATGCTAGGAACACCACCACCTT
TTGAAGGCTCCAGTGAGGCCTTGTTTCTTCCATTTTCTGGGGATGTCAGTATTTCTTCACTCCT
ACTAACAACATTTCAATTTTGCCTCCCTTTTTTCCTGCGGTCACAGATCCTTCTAGATTCCTGC
AAGGACACTTTTTTTAGGGATAATTACACTTTTTTTAGGGATAATTTTAGGGATAATTACAGGT
TAATCTTCCCCTCTTGCCATTCATGCTTATGTGCCATTTGTCCCTTTGAACAGAGAAGCATTCA
TAGGTTCCTGGGTTTATGATGTGGCTATGGGGAAAATCTGGGAAAGGTTTCTTATCCTGCTTTA
TTCAGTTTCCCACACAGCCAAAGACCCCAGAGAGCAAAATGCTAATTGATTAATTCATGGGCAA
AAAGTTCTAAGATTAGTATGTGTGAAGGAGAATTGTCATTTATCATTCAGATTACCTCCCCTTA
CTTTGCATAAATACCTTTTAAAAAACTCGGCATGAAAATTCTCCTATTCCAGTAAATCATCTGG
GTTATCACATCAAACCTTTATATGTTTTAAATATCCTTCCTCTCATAGTTAAACATGTTACGAT
AGGAAAAATAACCAACCTGTGAAAACTGCAATAGCACCGCTAAAATGATGCTCGTGCCATATTA
CGTTTTCAAAAAGCATTTGCTTCTTTATCATGAGTGAGTTCGTTCTCCATGATTGTCAGATCTG
CAAGTGATAACTACTAATTCACTAAGAATAATAAACAGAATATGCTCTTCTTAATTAAAGGAAC
AATCCTAAAACCTGACTCGATTTCTTTTTATATTGCAGCAAAAAAAATATTTCTTGACTGAAAT
CACAGTTTTTGAACTAGATTATAGACTTCTAAATTGAATCACGTTTTCAACCATTCAGCCTTTC
CAGATTATATAATGATGAAACATATTGGAAAACAAAAACAGTTGAATGCCAGTTGAGTCCTTAA
TTTTCTTTCCTTTCCTTTTTTTTTTTTTTTAATCTGAAACAAACAAGAGATTTTCCAGGCACAG
TTTGGCATGGCGAAGAAACATTAAAAGTGGGGGAAAAAAAGGGGGGGAAGAATCAATTTATAGA
AGGCAATTGCAAGAAGCATTTCGTAGAAGCCAAGTTCCTTAAAGATGTTTATGTTCCATTTAAT
ACTAAAGAGATAGGTGCTGCCCGGGAGGGTGGAGAGAGGATGACTGCTTTGTGTTCTTCGGAAA
GCTGACCACATTTAGTGAGAACTGAACTGCTATTTTTAGGACTTTATTTTATTTTCTTAACTGA
GACTAACTTAGAACCTTTAAAAAAAATATGGAAAAGTATAGTTAAGAAGGAAAATCCGGCTAGA
CTAGTGGGTGCCTTTACAGAAATATTGATGATTTTGGAATGTTCAATGAAAATGCATATATAAT
AGCTGTGGTTTAAGAATCCATATATAAGGTAGGTTTTCTTTTCACATATAAACTCCAATACTCT
TACTTAGTTCTATTTGAAAATTAAGTTACTATGGGGAGGAATTTCTTTTAAGTTTGCTTGGTTG
TATTAAAATTATAATTACAGTTCGAGAAAACGTTATGAAATTCATGTGGTGATAGCAAATTAAA
TATGCTCAAAATTTAAGTCTAAAATAAAAGCCCAGAAATTGAAAATATTGGGTTGTCTTGATCA
CTCAGAATGGTGGCGCATTCAGACCCTGTGAATGGCATCTCAGTGTTGCCAGCCTCTTAATGAG
CTAAAGTTTGAATAATTTATGACTGAACTGTAATAATTCTGCACTGCAGTCCTTTCTCCTTCCT
CTCATTTTCTGAAGGATTCAGATATCATGATACTTAATACATTTTTCCAGTTGTGTTCCAATTT
CTTTAGACATATTTCATTAAATCTCAAGAAATGTGTTGAGGAGGAATAAAAGCAGAATTTGGGG
ACCCAACAAGAGCATGTGGCTTGTCTATACTGCCGCTACTGTGACTCGATTTGTCTAATGAGGT
GACAAACTAGCAAATGTCATTGTGTTTGAGATGTCAGGAGATCACGAGTAGATTCCTAACTTGG
GCATAGCTGTGTTCTTGATTTAGCTTCTCGTGATAAGAATTCCTATTGCAATTATGTTTTGCTG
AACCCGTGTTTTGGTTGGTTGCTTGGTCTTACCTTTGGAACACTCTTTGTAGGTAAATAAAGCA
CCATTTAAAACAA

hide sequence

RefSeq Acc Id:

XM_008764648 ⟹ XP_008762870

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	61,317,640 - 61,408,985 (+)	NCBI
mRatBN7.2	6	55,590,866 - 55,681,227 (+)	NCBI
Rnor_6.0	6	58,467,825 - 58,558,638 (+)	NCBI

Sequence:

show sequence

TGTGTACCCGAACCTCTACGACAGTGCTTTAAGGACATCGGCCTAATAATAATGGATCAAACAA
CGATAGGAATGAGAGCTGGTTGACTCAGTACACTAGGTTTCAGAATCCCTCCGGTCTTAACCAA
AACAGCGAGTTAGGAAGGAAGTGGGTTTCCTCGGTGGTTTTTCTTGGGTGCGGACCTAAGACTT
CTCCCAGAGTGGTCGCATAGGAATAGGGGTGCGGGAGACTCTAGGGAAGGGGCCAAAAGCTGCC
TGATTGACAGCCCGAAATCTGATCTTGTGAAAGAGACGTGGAGCCAATGGGAGGCAGCGATCCA
TCAGTTTGGATTGGAGGCCCCTGGAGGAGAAGTAGAGGAAAAACCACCGAATTCAGCTCTGTCA
GAGGCGCTTTCGGCTTCCAAGGGGAAGTGCTGGGCAATAATTAATGTTTTTATTAAATTTGGAG
GGAATTTTTTGCAGCCGTTCGCCTAGCGTGGCCTTCAGGTTGATAGAAGTCCAGATCCCGAGGA
AATCTGCAGCTAAATGCTCAAAATATAAAACACTGAGCTAGTATTTGAGAAGAGGAGCAGAATG
GATGGATTTTATGACCAGCAAGTGCCTTACGTGGTCACCAACAGTCAGCGTGGGAGAAACTGTA
CCGAGAAACCAACAAATGTCAGGAAAAGAAAATTCATTAACAGAGATCTGGCTCATGATTCAGA
AGAACTCTTTCAAGATCTGAGTCAGTTACAAGAAACATGGCTTGCTGAAGCTCAGGTACCTGAC
AATGATGAGCAGTTTGTGCCAGACTATCAGGCCGAAAGTTTGGCTTTTCATGGCCTACCACTGA
AAATCAAGAAAGAACCCCACAGCCCATGTTCAGAACTCGGGTCTGCTTGCAGCCAAGAGCAGCC
CTTTAAATTCAGCTATGGAGAAAAGTGCCTGTACAATGTCAGTGCCTATGATCAGAAGCCACAA
GTGGGAATGAGGCCCTCCAATCCCCCAACACCATCCAGCACTCCAGTGTCCCCACTACATCATG
CATCTCCAAACACAGCTCATACTCCGAAACCTGACCGGGCCTTCCCAGCTCACCTCCCGCCTTC
CCAGTCCATACCAGACAGCACCTACCCCATGGACCACAGATTTCGCCGCCAGCTTTCTGAACCC
TGTAACTCTTTCCCTCCTTTGCCAACAATGCCAAGGGAAGGGCGTCCTATGTACCAACGCCAGA
TGTCTGAGCCAAACATCCCCTTCCCACCACAAGGCTTCAAGCAGGAGTACCACGACCCAGTCTA
TGAACATACCACCATGGTTGGCGGTGCAGCCAGCCAAAGCTTTCCCCCTCCTTTGATGATCAAA
CAGGAACCCAGAGACTTTGCATATGATTCAGGCTGCATGTTTGAGAAGGGTCCCAGGCAGTTCT
ATGATGACACCTGTGTCGTCCCGGAGAAGTTCGATGGGGACATTAAGCAAGAGCCAGGAATGTA
CCGGGAAGGTCCCACGTACCAGAGGCGAGGATCGCTTCAGCTCTGGCAGTTTCTGGTAGCTCTT
CTGGATGACCCTTCAAATTCTCATTTTATTGCCTGGACTGGGCGAGGCATGGAATTTAAACTGA
TTGAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAGAACAGGCCAGCTATGAACTATGA
CAAACTTAGCCGTTCTCTCCGCTATTATTATGAGAAGGGAATCATGCAAAAGGTGGCTGGAGAA
AGATATGTCTACAAATTTGTGTGTGACCCGGAAGCCCTTTTCTCCATGGCCTTTCCGGATAATC
AGCGCCCCCTGCTGAAGACGGACATGGAACGTCACATCAACGAAGAGGACACGGTGCCCCTGTC
TCACTTTGATGAGAGCATGACCTACATGCCAGAAGGGGGCTGCTGCAACCCCCACCCTTACAAC
GAAGGATACGTGTACTAACCTAACAGTCAAGCAAGGCACCCCGTGCTTCGCCTTTTTTTTTTTT
TCAAGATACAGAGAATCTCCGAATTCTCTTACAATGTTTGTTTTATTTCTGTTGTTTGTATTTT
ACTTTTTAAATAATAATACAAAAGGGGGCTTTTCCTGTTGCATTATTCTATGGTCTGCCATGGA
CTGCGCACTTTATTTGAGGGTGGGTGGGAATAATCTAGACATTCATTCTTTGTAACAGGAAGAT
GGTGGGTGAACGGGCAGAGGGAGCTGAGGGATTCCTTTTTACTTAGGCTTGGGATGGGGTCCTA
CAGGTTTTCTGTATGATGAAGCTATATCATGTTTGTTCGATTTCTTAATAACGTAAGATAATTT
TCCCTGGGTATCTACGGTACAGTTGATTTCACGTTGTGTAAATATCTTCTTGGAGACCATTTGC
CTTGGGCATTTCCCCATCAGTACTGAGTCTCTGCAGGTGTACAAAAAAAAAAAAAAAATCTACT
GTAAATGGCAGTTTCATGTTAGAAATGACTGTTTTTGCACCTCTTGTAAAAAAAAGAAAAAAGA
ATATTTAGCAATTGCATTTGTTGTTCTTTCTGTTTCATACTGCTTTACAGATGACTTGTAGAGA
ATGACCATAAATGTGGGCAATTCTCTCAGAAGTTGAGTAATCCCCATAACTGTAAATGAGGGCC
ACAGTTTTGGACTCTGGCTCTAACTGAGTCACAGGCCAGTAGCATTACATGGATCTGGTGTCAT
CTTGCTGTTTTGGTACTACAAGTACTGTCTTTTAAATATGTTGATGCCCATTTCACTTAAATAA
TGACATTCATGATCCTTTGGAATCTTCATGTAAGTGTTAAAGCTGGGATCACAATGAAGCAAAA
AAGAAAAAAGAAAAAAAAATGACCTGTCTCCTTTCACTATCTTCAGTACATAAATACATTATTT
AATCAATAAGAATTAACTGTACTAAATCACATATTATGCTGTTCTAGTTACAGCCATCACTCTT
TAAGAAAAATATCCACTACACTAAATAGGTACTATAGTAATTTTTAGACATGGTACCATTGATA
TGCATCTAAATGTTTCACTGCTGTGTTCTGTTGATAACATATATAAATATTAGATAATGCTAAT
GCTTCTGCTGCTGTCTTTTCTGTAATATTCTCTTTCATGCTGAATTTACTATGACCATTTATAA
GCAATGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGAGTCAAACCATTTATTGCTT
AAAAAATAGCTTACACCACGGTTACGCTCTAAGCAGCTTTTATGCACATTGACAAATGAAGAGT
GAGCCTGGGCTTGCTAAAGGAAACTGTGGAAACTTTTGTAACTTTTGGTGAAATGCAACATTGT
TTATGGACTGTTAAAGAGTATGAGGAAGTCGATGTGTGACGTAAGTGCTGGCACTGATGCTGTC
CTTCATCTCCTTTGGACACGCCTGTAAATGTGATTGGATTGTACGGAAGAAAAATTCAAACATC
TGAGATTTCAATGTTTCGGCCTTGTTTCCATTTTGTTTGATTGTTTGTTTGTTTTATTGTACAC
TCTAAAACAACAGCATTGAACATGGGCCATGTGGTTTCATTCACTCTGAAAATCATAAGGAAAT
GGTGTCTTAAGACCCCGCCCCCCCCAAGTAGCTGCTTACCAGATCCAAGCAAAGAAAATGAATT
GTGTTCACTCTGTTACTATTCTGGAAGAACAACTTTCATAAAGAATCTACAGGAAAACGTTACT
GCTTAGAATACCCTTAAAGCCCAAGTAAAGGGAGCATTTCAGCAGCACAAGAAGGAAATTGAGA
AGATGAGCCCTCAGCATCCTTTAGCCCATGTTCTGCAGATCACAGTTGTTTCTGTAACACAACA
GTTCCTTCATTCTCCACACGCACAAATCGACACTATCCACATGCTCCATAAATATTCTGATCCC
TGCAGATCTCTTTTATAAATGATTTCATTGACTGTGCTGCATGTGTTTCCCTTAGCCCTTCACG
GGCTGATAAGTATGCCTTAAAAATCAGGACAGCCACCATGATCATGTGGCTACTTACAGCACTT
GGAATTAAATGACTTTCTAAGTAACCAGTGAAATATTTATCGGATAGACACCCGAGATATATGA
TTGAGCTCTTGGTAAAATAGATAAATTCTAAGTGTGTCTTTAAATGTAAATCATATAGAGGAGT
CTTTTCTTTGTCTATAGTTCTTCCCCCTGCCCTTTTAATATTCTTGTTCTAGTCAGTCAGAGAG
AAAGATTCAGACTCTAAGTTGTTCTAAAGGATGAAAAGAAGAAAGATGTTAATTTTGATGTATA
AGAACAAGTATATTTCTTGTTGCAATAGGCAGTGTTTAAATGGACTATGTAAGTCATCAGCTAG
CATTAAGTATTCCTAATAATAAAAATTTCAAAGTATAATATCATATACTTTAGAAAAATGAAAG
GTTTTATATTCTGATTTCTTTCTTTTTTTTTTCAGATTGACTAAAAATTCTAGTCACTGATGTT
TGCAAGATTATTGCATTTTGTATTTCAACTGCATTGGATACCAAGCATAGAAATTAGTGAAGCC
ATCTTTTTCTTTTCAGGTTATAAAAGAAATGTAAAGCTATATCCACTAGTGTGTGCTATCTCTA
GTTGAAGATGTGCATATACCCGACAACGTCATAAAACAAAGAATGTTACCTTCCAAATAAGTTA
TGAGAAATTATTTTCCTAGGGGTGCTTCAAAATCAAAATCCACATAACTGAGTGTGTAGTATTT
CTTCAAGCCCCAGAAGCCTTGCTTCCTCTAGATGCTATAACAAACTGCTCAGACTTGAGTAACT
ATACAAATTTACAATCTTGGAGGTCAGAATTTCAAAGTCAGCCTTAAAGGGCTAAAACCAAGAT
GCTAGGAACACCACCACCTTTTGAAGGCTCCAGTGAGGCCTTGTTTCTTCCATTTTCTGGGGAT
GTCAGTATTTCTTCACTCCTACTAACAACATTTCAATTTTGCCTCCCTTTTTTCCTGCGGTCAC
AGATCCTTCTAGATTCCTGCAAGGACACTTTTTTTAGGGATAATTACACTTTTTTTAGGGATAA
TTTTAGGGATAATTACAGGTTAATCTTCCCCTCTTGCCATTCATGCTTATGTGCCATTTGTCCC
TTTGAACAGAGAAGCATTCATAGGTTCCTGGGTTTATGATGTGGCTATGGGGAAAATCTGGGAA
AGGTTTCTTATCCTGCTTTATTCAGTTTCCCACACAGCCAAAGACCCCAGAGAGCAAAATGCTA
ATTGATTAATTCATGGGCAAAAAGTTCTAAGATTAGTATGTGTGAAGGAGAATTGTCATTTATC
ATTCAGATTACCTCCCCTTACTTTGCATAAATACCTTTTAAAAAACTCGGCATGAAAATTCTCC
TATTCCAGTAAATCATCTGGGTTATCACATCAAACCTTTATATGTTTTAAATATCCTTCCTCTC
ATAGTTAAACATGTTACGATAGGAAAAATAACCAACCTGTGAAAACTGCAATAGCACCGCTAAA
ATGATGCTCGTGCCATATTACGTTTTCAAAAAGCATTTGCTTCTTTATCATGAGTGAGTTCGTT
CTCCATGATTGTCAGATCTGCAAGTGATAACTACTAATTCACTAAGAATAATAAACAGAATATG
CTCTTCTTAATTAAAGGAACAATCCTAAAACCTGACTCGATTTCTTTTTATATTGCAGCAAAAA
AAATATTTCTTGACTGAAATCACAGTTTTTGAACTAGATTATAGACTTCTAAATTGAATCACGT
TTTCAACCATTCAGCCTTTCCAGATTATATAATGATGAAACATATTGGAAAACAAAAACAGTTG
AATGCCAGTTGAGTCCTTAATTTTCTTTCCTTTCCTTTTTTTTTTTTTTTAATCTGAAACAAAC
AAGAGATTTTCCAGGCACAGTTTGGCATGGCGAAGAAACATTAAAAGTGGGGGAAAAAAAGGGG
GGGAAGAATCAATTTATAGAAGGCAATTGCAAGAAGCATTTCGTAGAAGCCAAGTTCCTTAAAG
ATGTTTATGTTCCATTTAATACTAAAGAGATAGGTGCTGCCCGGGAGGGTGGAGAGAGGATGAC
TGCTTTGTGTTCTTCGGAAAGCTGACCACATTTAGTGAGAACTGAACTGCTATTTTTAGGACTT
TATTTTATTTTCTTAACTGAGACTAACTTAGAACCTTTAAAAAAAATATGGAAAAGTATAGTTA
AGAAGGAAAATCCGGCTAGACTAGTGGGTGCCTTTACAGAAATATTGATGATTTTGGAATGTTC
AATGAAAATGCATATATAATAGCTGTGGTTTAAGAATCCATATATAAGGTAGGTTTTCTTTTCA
CATATAAACTCCAATACTCTTACTTAGTTCTATTTGAAAATTAAGTTACTATGGGGAGGAATTT
CTTTTAAGTTTGCTTGGTTGTATTAAAATTATAATTACAGTTCGAGAAAACGTTATGAAATTCA
TGTGGTGATAGCAAATTAAATATGCTCAAAATTTAAGTCTAAAATAAAAGCCCAGAAATTGAAA
ATATTGGGTTGTCTTGATCACTCAGAATGGTGGCGCATTCAGACCCTGTGAATGGCATCTCAGT
GTTGCCAGCCTCTTAATGAGCTAAAGTTTGAATAATTTATGACTGAACTGTAATAATTCTGCAC
TGCAGTCCTTTCTCCTTCCTCTCATTTTCTGAAGGATTCAGATATCATGATACTTAATACATTT
TTCCAGTTGTGTTCCAATTTCTTTAGACATATTTCATTAAATCTCAAGAAATGTGTTGAGGAGG
AATAAAAGCAGAATTTGGGGACCCAACAAGAGCATGTGGCTTGTCTATACTGCCGCTACTGTGA
CTCGATTTGTCTAATGAGGTGACAAACTAGCAAATGTCATTGTGTTTGAGATGTCAGGAGATCA
CGAGTAGATTCCTAACTTGGGCATAGCTGTGTTCTTGATTTAGCTTCTCGTGATAAGAATTCCT
ATTGCAATTATGTTTTGCTGAACCCGTGTTTTGGTTGGTTGCTTGGTCTTACCTTTGGAACACT
CTTTGTAGGTAAATAAAGCACCATTTAAAACAA

hide sequence

RefSeq Acc Id:

XM_063262096 ⟹ XP_063118166

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	61,319,106 - 61,408,985 (+)	NCBI

RefSeq Acc Id:

XM_063262097 ⟹ XP_063118167

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	61,317,640 - 61,408,985 (+)	NCBI

RefSeq Acc Id:

XM_063262098 ⟹ XP_063118168

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	61,316,836 - 61,408,985 (+)	NCBI

RefSeq Acc Id:

XM_063262099 ⟹ XP_063118169

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	61,321,426 - 61,408,985 (+)	NCBI

RefSeq Acc Id:

XM_063262100 ⟹ XP_063118170

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	61,321,422 - 61,408,985 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001102179	(Get FASTA)	NCBI Sequence Viewer
	NP_001156628	(Get FASTA)	NCBI Sequence Viewer
	XP_008762869	(Get FASTA)	NCBI Sequence Viewer
	XP_008762870	(Get FASTA)	NCBI Sequence Viewer
	XP_063118166	(Get FASTA)	NCBI Sequence Viewer
	XP_063118167	(Get FASTA)	NCBI Sequence Viewer
	XP_063118168	(Get FASTA)	NCBI Sequence Viewer
	XP_063118169	(Get FASTA)	NCBI Sequence Viewer
	XP_063118170	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI68860	(Get FASTA)	NCBI Sequence Viewer
	EDM03329	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000059718
	ENSRNOP00000059718.1
	ENSRNOP00000101720
	ENSRNOP00000101720.1
	ENSRNOP00000103142.1
	ENSRNOP00000110357
	ENSRNOP00000110357.1

RefSeq Acc Id:	NP_001102179 ⟸ NM_001108709
- Peptide Label:	isoform b
- UniProtKB:	B5DEZ2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDGFYDQQVPYVVTNSQRGRNCTEKPTNVRKRKFINRDLAHDSEELFQDLSQLQETWLAEAQVP DNDEQFVPDYQAESLAFHGLPLKIKKEPHSPCSELGSACSQEQPFKFSYGEKCLYNVSAYDQKP QVGMRPSNPPTPSSTPVSPLHHASPNTAHTPKPDRAFPAHLPPSQSIPDSTYPMDHRFRRQLSE PCNSFPPLPTMPREGRPMYQRQMSEPNIPFPPQGFKQEYHDPVYEHTTMVGGAASQSFPPPLMI KQEPRDFAYDSGCMFEKGPRQFYDDTCVVPEKFDGDIKQEPGMYREGPTYQRRGSLQLWQFLVA LLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAG ERYVYKFVCDPEALFSMAFPDNQRPLLKTDMERHINEEDTVPLSHFDESMTYMPEGGCCNPHPY NEGYVY hide sequence

RefSeq Acc Id:	NP_001156628 ⟸ NM_001163156
- Peptide Label:	isoform a
- UniProtKB:	A0A0G2JTM3 (UniProtKB/TrEMBL), B5DEZ2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDGFYDQQVPYVVTNSQRGRNCTEKPTNVRKRKFINRDLAHDSEELFQDLSQLQETWLAEAQVP DNDEQFVPDYQAESLAFHGLPLKIKKEPHSPCSELGSACSQEQPFKFSYGEKCLYNVSAYDQKP QVGMRPSNPPTPSSTPVSPLHHASPNTAHTPKPDRAFPAHLPPSQSIPDSTYPMDHRFRRQLSE PCNSFPPLPTMPREGRPMYQRQMSEPNIPFPPQGFKQEYHDPVYEHTTMVGGAASQSFPPPLMI KQEPRDFAYDSEVPSCHSIYMRQESFLAHPSRTEGCMFEKGPRQFYDDTCVVPEKFDGDIKQEP GMYREGPTYQRRGSLQLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAM NYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCDPEALFSMAFPDNQRPLLKTDMERHINEEDTV PLSHFDESMTYMPEGGCCNPHPYNEGYVY hide sequence

RefSeq Acc Id:	XP_008762870 ⟸ XM_008764648
- Peptide Label:	isoform X4
- UniProtKB:	B5DEZ2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDGFYDQQVPYVVTNSQRGRNCTEKPTNVRKRKFINRDLAHDSEELFQDLSQLQETWLAEAQVP DNDEQFVPDYQAESLAFHGLPLKIKKEPHSPCSELGSACSQEQPFKFSYGEKCLYNVSAYDQKP QVGMRPSNPPTPSSTPVSPLHHASPNTAHTPKPDRAFPAHLPPSQSIPDSTYPMDHRFRRQLSE PCNSFPPLPTMPREGRPMYQRQMSEPNIPFPPQGFKQEYHDPVYEHTTMVGGAASQSFPPPLMI KQEPRDFAYDSGCMFEKGPRQFYDDTCVVPEKFDGDIKQEPGMYREGPTYQRRGSLQLWQFLVA LLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAG ERYVYKFVCDPEALFSMAFPDNQRPLLKTDMERHINEEDTVPLSHFDESMTYMPEGGCCNPHPY NEGYVY hide sequence

RefSeq Acc Id:

XP_008762869 ⟸ XM_008764647

- Peptide Label:

isoform X3

- Sequence:

show sequence

MSARGDGGQQQLHSKFVAGFICHIEKNESQRGRNCTEKPTNVRKRKFINRDLAHDSEELFQDLS
QLQETWLAEAQVPDNDEQFVPDYQAESLAFHGLPLKIKKEPHSPCSELGSACSQEQPFKFSYGE
KCLYNVSAYDQKPQVGMRPSNPPTPSSTPVSPLHHASPNTAHTPKPDRAFPAHLPPSQSIPDST
YPMDHRFRRQLSEPCNSFPPLPTMPREGRPMYQRQMSEPNIPFPPQGFKQEYHDPVYEHTTMVG
GAASQSFPPPLMIKQEPRDFAYDSGCMFEKGPRQFYDDTCVVPEKFDGDIKQEPGMYREGPTYQ
RRGSLQLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLR
YYYEKGIMQKVAGERYVYKFVCDPEALFSMAFPDNQRPLLKTDMERHINEEDTVPLSHFDESMT
YMPEGGCCNPHPYNEGYVY

hide sequence

Ensembl Acc Id:

ENSRNOP00000059718 ⟸ ENSRNOT00000065396

Ensembl Acc Id:

ENSRNOP00000068767 ⟸ ENSRNOT00000091263

RefSeq Acc Id:	XP_063118168 ⟸ XM_063262098
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063118167 ⟸ XM_063262097
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063118166 ⟸ XM_063262096
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063118170 ⟸ XM_063262100
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063118169 ⟸ XM_063262099
- Peptide Label:	isoform X5

Ensembl Acc Id:

ENSRNOP00000103142 ⟸ ENSRNOT00000135524

Ensembl Acc Id:

ENSRNOP00000110357 ⟸ ENSRNOT00000138494

Ensembl Acc Id:

ENSRNOP00000101720 ⟸ ENSRNOT00000146193

Protein Domains

ETS

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2JTM3-F1-model_v2	AlphaFold	A0A0G2JTM3	1-477	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13694567

Promoter ID:

EPDNEW_R5092

Type:

single initiation site

Name:

Etv1_1

Description:

ets variant 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	6	58,468,208 - 58,468,268	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1312007	AgrOrtholog
BioCyc Gene	G2FUF-37766	BioCyc
Ensembl Genes	ENSRNOG00000006867	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000065396	ENTREZGENE
	ENSRNOT00000065396.5	UniProtKB/TrEMBL
	ENSRNOT00000135524.1	UniProtKB/TrEMBL
	ENSRNOT00000138494	ENTREZGENE
	ENSRNOT00000138494.1	UniProtKB/TrEMBL
	ENSRNOT00000146193	ENTREZGENE
	ENSRNOT00000146193.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.10.10	UniProtKB/TrEMBL
InterPro	Ets	UniProtKB/TrEMBL
	ETS_fam	UniProtKB/TrEMBL
	ETS_PEA3_N	UniProtKB/TrEMBL
	WH-like_DNA-bd_sf	UniProtKB/TrEMBL
	WH_DNA-bd_sf	UniProtKB/TrEMBL
KEGG Report	rno:362733	UniProtKB/TrEMBL
NCBI Gene	362733	ENTREZGENE
PANTHER	PTHR11849	UniProtKB/TrEMBL
	PTHR11849:SF196	UniProtKB/TrEMBL
Pfam	Ets	UniProtKB/TrEMBL
	ETS_PEA3_N	UniProtKB/TrEMBL
PhenoGen	Etv1	PhenoGen
PRINTS	ETSDOMAIN	UniProtKB/TrEMBL
PROSITE	ETS_DOMAIN_1	UniProtKB/TrEMBL
	ETS_DOMAIN_2	UniProtKB/TrEMBL
	ETS_DOMAIN_3	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000006867	RatGTEx
SMART	ETS	UniProtKB/TrEMBL
Superfamily-SCOP	SSF46785	UniProtKB/TrEMBL
UniProt	A0A0G2JTM3	ENTREZGENE
	A0ABK0L2R0_RAT	UniProtKB/TrEMBL
	A0ABK0LEA3_RAT	UniProtKB/TrEMBL
	A0ABK0LXY5_RAT	UniProtKB/TrEMBL
	B5DEZ2	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-09-20	Etv1	ETS variant transcription factor 1	Etv1	ets variant 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-10-23	Etv1	ets variant 1	Etv1	ets variant gene 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Etv1	ets variant gene 1	Etv1_predicted	ets variant gene 1 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Etv1_predicted	ets variant gene 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD