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Gene: Rsph10b (radial spoke head 10 homolog B) Rattus norvegicus

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Symbol:

Rsph10b

Name:

radial spoke head 10 homolog B

RGD ID:

1311893

Description:

Predicted to be located in sperm flagellum. Orthologous to several human genes including RSPH10B (radial spoke head 10 homolog B); INTERACTS WITH 17alpha-ethynylestradiol; 6-propyl-2-thiouracil; acrylamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

hypothetical LOC288478; LOC288478; radial spoke head 10 homolog B (Chlamydomonas); RGD1311893

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RSPH10B (radial spoke head 10 homolog B)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, PhylomeDB, Treefam
Chinchilla lanigera (long-tailed chinchilla):	Rsph10b (radial spoke head 10 homolog B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rsph10b (radial spoke head 10 homolog B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	LOC100516852 (radial spoke head 10 homolog B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Rsph10b (radial spoke head 10 homolog B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	RSPH10B2 (radial spoke head 10 homolog B2)	HGNC	Ensembl, HomoloGene, OrthoDB, Panther, PhylomeDB, Treefam
Alliance orthologs ³
Mus musculus (house mouse):	Rsph10b (radial spoke head 10 homolog B (Chlamydomonas))	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	RSPH10B (radial spoke head 10 homolog B)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	RSPH10B2 (radial spoke head 10 homolog B2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rsph10b (radial spoke head 10 homolog B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rsph10b	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rsph10b	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	15,741,097 - 15,788,887 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	12	15,741,098 - 15,788,827 (-)	Ensembl				GRCr8
mRatBN7.2	12	10,627,434 - 10,675,227 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	10,627,435 - 10,675,167 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	12	11,433,901 - 11,482,300 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	12,057,188 - 12,105,591 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	11,081,521 - 11,129,611 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	12	17,220,133 - 17,267,964 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	12	17,146,273 - 17,194,118 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	12	15,997,305 - 16,045,122 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	12	26,578,326 - 26,626,231 (-)	NCBI		F344_StmMcwi
Rnor_6.0	12	12,665,194 - 12,713,834 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	12,665,194 - 12,712,742 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	12	14,709,090 - 14,756,138 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	12	10,956,763 - 11,002,855 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	12	12,424,676 - 12,472,608 (-)	NCBI		Celera
RGSC_v3.1	12	10,986,691 - 11,032,783 (-)	NCBI
Cytogenetic Map	12	p11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17alpha-ethynylestradiol (EXP)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP,ISO)

afimoxifene (ISO)

alpha-Zearalanol (EXP)

aristolochic acid A (ISO)

benzo[a]pyrene (EXP,ISO)

bisphenol A (EXP)

butanal (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

Cuprizon (EXP)

glycidol (EXP)

lipopolysaccharide (ISO)

perfluorooctanoic acid (EXP)

propanal (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

silicon dioxide (ISO)

tetrachloromethane (EXP)

trichloroethene (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

9+2 motile cilium (IEA,ISS)

axoneme (IEA)

cilium (IEA,ISO,ISS)

motile cilium (IEA)

sperm flagellum (ISO,ISS)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
3.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Genomics

Comparative Map Data

Rsph10b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	15,741,097 - 15,788,887 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	12	15,741,098 - 15,788,827 (-)	Ensembl				GRCr8
mRatBN7.2	12	10,627,434 - 10,675,227 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	10,627,435 - 10,675,167 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	12	11,433,901 - 11,482,300 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	12,057,188 - 12,105,591 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	11,081,521 - 11,129,611 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	12	17,220,133 - 17,267,964 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	12	17,146,273 - 17,194,118 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	12	15,997,305 - 16,045,122 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	12	26,578,326 - 26,626,231 (-)	NCBI		F344_StmMcwi
Rnor_6.0	12	12,665,194 - 12,713,834 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	12,665,194 - 12,712,742 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	12	14,709,090 - 14,756,138 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	12	10,956,763 - 11,002,855 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	12	12,424,676 - 12,472,608 (-)	NCBI		Celera
RGSC_v3.1	12	10,986,691 - 11,032,783 (-)	NCBI
Cytogenetic Map	12	p11	NCBI

RSPH10B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	5,926,136 - 5,970,851 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	5,925,550 - 5,970,702 (-)	Ensembl			hg38	GRCh38
GRCh37	7	5,965,767 - 6,010,320 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	5,932,303 - 5,976,840 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Cytogenetic Map	7	p22.1	NCBI
HuRef	7	5,880,298 - 5,891,720 (-)	NCBI		HuRef
HuRef	7	5,871,801 - 5,872,203 (-)	NCBI		HuRef
CHM1_1	7	5,965,403 - 6,009,918 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	6,043,889 - 6,088,454 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	6,012,122 - 6,056,659	NCBI

Rsph10b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955460	13,792,259 - 13,840,754 (+)	Ensembl
ChiLan1.0	NW_004955460	13,791,666 - 13,840,754 (+)	NCBI	ChiLan1.0	ChiLan1.0

Rsph10b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	139,426,557 - 139,476,374 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936750	470,157 - 518,703 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LOC100516852
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	3	5,146,666 - 5,199,589 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	5,207,679 - 5,260,119 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Rsph10b
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	16	9,194,340 - 9,243,274 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Rsph10b
260 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	45
Count of miRNA genes:	42
Interacting mature miRNAs:	44
Transcripts:	ENSRNOT00000034483
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2312418	Kidm41	Kidney mass QTL 41	3.7	0.0001	kidney mass (VT:0002707)	single kidney wet weight to body weight ratio (CMO:0000622)	12	5921918	25247790	Rat
70213	Niddm27	Non-insulin dependent diabetes mellitus QTL 27	3.72		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	11200494	52308831	Rat
2306789	Ean6	Experimental allergic neuritis QTL 6	4.9		nervous system integrity trait (VT:0010566)	experimental autoimmune neuritis severity score (CMO:0001528)	12	1	29775522	Rat
8552964	Pigfal17	Plasma insulin-like growth factor 1 level QTL 17	3.5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200494	52308831	Rat
7411641	Foco19	Food consumption QTL 19	27.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat
1357337	Gluco3	Glucose level QTL 3		0.0004	adipocyte glucose uptake trait (VT:0004185)	absolute change in adipocyte glucose uptake (CMO:0000873)	12	1	16966671	Rat
5684888	Pia42	Pristane induced arthritis QTL 42			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	12	3489416	48489416	Rat
1331739	Hrtrt14	Heart rate QTL 14	3.56232		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	12	1	38687564	Rat
8552912	Pigfal6	Plasma insulin-like growth factor 1 level QTL 6	5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200497	52308831	Rat
1549829	Scl48	Serum cholesterol level QTL 48	5		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	12	15264248	52308831	Rat
61331	Eau2	Experimental allergic uveoretinitis QTL 2		0.0005	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	12	1	33700600	Rat
10059594	Kidm46	Kidney mass QTL 46	3.79	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	12	11743528	52308831	Rat
8552918	Pigfal7	Plasma insulin-like growth factor 1 level QTL 7			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200494	52308831	Rat
1581516	Cm56	Cardiac mass QTL 56	4.2	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	12	11869600	16966542	Rat
61334	Gluco17	Glucose level QTL 17	6.3		adipocyte glucose uptake trait (VT:0004185)	adipocyte maximal glucose uptake to basal glucose uptake ratio (CMO:0000874)	12	1	16966671	Rat
2293684	Bmd26	Bone mineral density QTL 26	4.4	0.0002	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	12	1	38635130	Rat
6893681	Bw109	Body weight QTL 109	2.3	0.004	body mass (VT:0001259)	body weight (CMO:0000012)	12	1	28133365	Rat
1302792	Scl21	Serum cholesterol level QTL 21	3.8	0.0011	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	12	12233000	30490641	Rat
1300174	Bw15	Body weight QTL 15	2.93		body mass (VT:0001259)	body weight loss (CMO:0001399)	12	1	28606299	Rat
1331787	Rf41	Renal function QTL 41	2.998		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	12	1	33700556	Rat
1331763	Wbc2	White blood cell count QTL 2	3.162		leukocyte quantity (VT:0000217)	total white blood cell count (CMO:0000365)	12	11200494	52308831	Rat
7204484	Bp358	Blood pressure QTL 358		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	12	1	24849755	Rat
7411547	Bw129	Body weight QTL 129		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	6	11200494	52308831	Rat
7387292	Kidm42	Kidney mass QTL 42	3.03	0.0004	kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	12	1	41361854	Rat
1298081	Cia25	Collagen induced arthritis QTL 25	4.7		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	12	2747694	47747694	Rat
2303568	Bw88	Body weight QTL 88	3		body mass (VT:0001259)	body weight (CMO:0000012)	12	1	28606299	Rat
2303575	Insul14	Insulin level QTL 14	4		blood insulin amount (VT:0001560)	blood insulin level (CMO:0000349)	12	3087180	48087180	Rat
7411588	Foco6	Food consumption QTL 6		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat
7243862	Mcs30	Mammary carcinoma susceptibility QTL 30	8.62		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	12	5633306	50633306	Rat
2293086	Iddm30	Insulin dependent diabetes mellitus QTL 30	3.82		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	7901625	33938215	Rat
7411597	Foco10	Food consumption QTL 10		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat

Markers in Region

RH135068

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	12	p11	UniSTS

RH141752

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	10,676,919 - 10,677,121 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	12,714,495 - 12,714,696	NCBI	Rnor6.0
Rnor_5.0	12	14,757,848 - 14,758,049	UniSTS	Rnor5.0
RGSC_v3.4	12	11,004,608 - 11,004,809	UniSTS	RGSC3.4
Celera	12	12,474,361 - 12,474,562	UniSTS
RH 3.4 Map	12	124.1	UniSTS
Cytogenetic Map	12	p11	UniSTS

BE119075

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	10,645,561 - 10,645,719 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	12,683,245 - 12,683,402	NCBI	Rnor6.0
Rnor_5.0	12	14,726,748 - 14,726,905	UniSTS	Rnor5.0
Celera	12	12,443,535 - 12,443,692	UniSTS
RH 3.4 Map	12	123.0	UniSTS
Cytogenetic Map	12	p11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
6	12	10	96	245	87	86	61	107	55	18	388	239	9	224	80	92	31	15	15

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001013867	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433437	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006248858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006248859	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006248860	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006248861	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271135	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271136	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271137	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271138	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC126486	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC081935	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212099	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000034483 ⟹ ENSRNOP00000037688

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	15,741,098 - 15,788,827 (-)	Ensembl
mRatBN7.2 Ensembl	12	10,627,435 - 10,675,167 (-)	Ensembl
Rnor_6.0 Ensembl	12	12,665,194 - 12,712,742 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000092526

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	15,774,928 - 15,788,802 (-)	Ensembl
mRatBN7.2 Ensembl	12	10,661,266 - 10,675,142 (-)	Ensembl
Rnor_6.0 Ensembl	12	12,682,828 - 12,712,717 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000159819 ⟹ ENSRNOP00000102642

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	15,741,098 - 15,788,827 (-)	Ensembl

RefSeq Acc Id:

NM_001013867 ⟹ NP_001013889

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	15,741,097 - 15,788,827 (-)	NCBI
mRatBN7.2	12	10,627,434 - 10,675,167 (-)	NCBI
Dahl_SR_JrHsd	12	17,220,133 - 17,267,949 (-)	NCBI
Lyon_Normotensive	12	17,146,273 - 17,194,103 (-)	NCBI
Lyon_Hypertensive	12	15,997,305 - 16,045,107 (-)	NCBI
F344_StmMcwi	12	26,578,326 - 26,626,216 (-)	NCBI
Rnor_6.0	12	12,665,194 - 12,712,742 (-)	NCBI
Rnor_5.0	12	14,709,090 - 14,756,138 (-)	NCBI
RGSC_v3.4	12	10,956,763 - 11,002,855 (-)	RGD
Celera	12	12,424,676 - 12,472,608 (-)	RGD

Sequence:

show sequence

CGGACGCGAAGTCTTCCTCAATGCCACTTTTGGATCTGCAGGCCTGGCCAGAGCAAGTGGGTAA
AACCCATCCATGCTTTGAAACAAAACTGCAGTCTACCGAAGGAATCATTGGCTAACTCTGCATC
TAAAGAAAACTCCGACATCTTCCAAAGGCCATGGTGAAAGAAAAGAAAAAAGCAGACAAAAAGG
GAGATAAGTCAGCCCGCTCTCCCTCCTCGATCTCTGATAACCCAGAAGCGGCTAAACAAGAAAT
CAGTGCCAGTAAGCAGGAAGTGGCCCCCAGTGCTGTCATCCCGGTATTGGAAACGCCACTCAAG
CAAACCCCTAAAAGAGACTCGGAACATACATACCAGAGTGAAGATGAAACTCAGTATGAAGAAC
CCATCCTGACCAAACTCATAGTGGAAAGCTACGAAGGGGAGAAAGTCCGTGGACTGTATGAGGG
AGAAGGCTTTGCGGTCTTTCAAGGCGGAAACACCTACCATGGAATGTTTTCCGAGGGACTGATG
CACGGGCAGGGGACTTACATTTGGGCTGACGGATTGAAATACGAGGGGGACTTTGTGAAGAACA
TCCCCATGAATCATGGCGTGTACACATGGCCAGATGGCAGCACGTATGAAGGAGAAGTGGTCAA
CGGCATGAGGAACGGATTCGGTATGTTCAAGTGTGGCACGCAGCCCGTGTCCTATATTGGCCAC
TGGTGTCACGGCAAGAGACATGGGAAGGGCTCCATCTATTACAATCAAGAGGGAACCTCTTGGT
ATGAAGGAGACTGGGTGTACAACATCAAAAAGGGCTGGGGAATACGATGCTACAAATCAGGAAA
CATATACGAAGGCCAGTGGGAGAACAACATGCGCCACGGGGAAGGCAGGATGAGGTGGCTCACA
ACAAACGAGGAGTACACGGGCCACTGGGAGAAGGGGATCCAGAACGGCTTTGGAACGCACACAT
GGTTCCTAAAGAGAATCCCCAACTCTCAGTATCCTTTGAGAAATGAATACATAGGGGCGTTTGT
AAATGGCTTCCGTCATGGACAAGGGAAGTTTTATTATGCCAGTGGAGCCATGTATGAGGGAGAA
TGGGTTTCCAACAAAAAGCAGGGCAGGGGCAGGATAACTTTCAAGAATGGCCGTGTGTATGAAG
GTCTGTTTTCCAACGATCACATTGCACAGTTCTTTGAAGCTGAAATGGATTACTCGTACAGCCT
GGACCGTCGGTCAGACATCTCCCAAAGGAGCCGGCAGGCTCGGGGATCTTCTGTCAGTGCTGAC
AGGGAGCCTGAAACCCTACGAAAGTTGGATGGCAGCGAAAGCCGCTCTGTGTTAGGATCGAGTA
TTGAGCTGGACTTAAATTTGTTGCTGGACATGTACCCTGAGGAAAGCCAAGAAGAAGAAAAGAA
GCAGGTGGAATATGCCGTCCTAAGGAACATCACAGAGTTAAGAAGGATCTACTGCTTCTACAGC
GGCCTTGGGTGTGACCACTCTCTGGATAACACCTTCCTGATGACAAAGCTTCACTTCTGGAGAT
TTCTGAAAGACTGCAGGTTCCATCACCACAACATAACTCTTGCGGATATGGACAGGGTATTGAG
TGTCTATAACGGCATCCCAATCGAAGAAATCCATTCTCCATTTAGAACCATACTCTTAAGAACA
TTCCTAAATTACCTCCTGCAGCTGGCCTACTACATCCATCACAAAGAATTCCAGAACAGAAGCC
CGTCCCTCTTTCTGTGCTTCACAAAGCTGATGGCCGAGAACATCCATCCACACGCCTGCCAGGT
GAAAGGTCACTTATTCAATGAGCAGCAGCGGACACTCTACTCAATGAATTACATCGATAAGTGC
TGGGAAATTTACACAGCCTACTGCAGACCGAACGAAGCCCCACCCTATGAGCTGACAATGAAGA
TGAGATATTTCCTCTGGATGCTGAAAGACTTTAGGATGATAAATAAGGAGTTAACTGCGACCAA
ATTCATGAGGGTGATAGCGGAGGACAACCCTTTCGTATATGATGGAATGGACAGCAACTTTGAA
CTTGAGCTAGTTTTCCTGGAGTTCTTCGAAGCTCTGTTGTGCTTCTCTCTCTGCTGCATGTTTG
ACCAGATGACTAGATCCTATTTAAAAGCCCCGTACGATGACGTCACTACAAACCGATATGGCAG
CACTCAGACGGTACTAAACCAGAGCATCCACAGGAGCCCAAGTGGGGCCACAAGCCATGACTCC
GAAGTCCACTTCAGCAGCACCAAGTCGTCCTTAGACAAGATAGGAGTCCTGCCCGATGGTAAAA
TCAGGCAATCAGAGCCCAAGCTCAAGAAGTCGCTGAGTGAGGACAAAGTCTCCAAAATGAACCT
CAAGGCTCAAGGAAGAGGGCTGGTGTTTATGTCTCCACATGGTGAGAAATATGAAAAGTCCAAA
GATGAACAGAAAGAGAAACTCAACATGTGGGTGAACAACCTCTACGTCTTCTTCGTCAGTGTGC
TCTTCAGCGCCTACAAACACGAGGAGGCGCTCAAGGAGAAGGTGGAGGAGAACAGGCTCCAGGA
AGCAGTGCTGGCTCAGCAGAAGCAGATCGAGAACGAGGAGCTGGAGGCCAGGCTGAACATCCTA
CGGGAAGAAGAGGCCAGGAGACAAGACTTTGAACTTGACATCACTGTGCTCAAGGAGCCACCGG
AGGTCCCAGCCGTACAGCCGCTCACACCCAGCCCCCCTAAAGAGGACTTGGTTTCCATGCAGAC
TAGCAAGGCCAGCCCAGGCAAGAAGAAGAAGAAGTGAAGGCACTCGGTGTCATGGTGAGCTGCA
AGCAGACAGAAAGCTGTGACAAATGTCCCCAAAAATAAAGTGTTTGCATTTAGCTTCTGAAAAA
AAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001433437 ⟹ NP_001420366

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Dahl_SR_JrHsd	12	17,220,141 - 17,267,964 (-)	NCBI
Lyon_Normotensive	12	17,146,281 - 17,194,118 (-)	NCBI
Lyon_Hypertensive	12	15,997,313 - 16,045,122 (-)	NCBI
F344_StmMcwi	12	26,578,334 - 26,626,231 (-)	NCBI

RefSeq Acc Id:

XM_006248858 ⟹ XP_006248920

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	15,741,105 - 15,788,861 (-)	NCBI
mRatBN7.2	12	10,627,434 - 10,675,197 (-)	NCBI
Rnor_6.0	12	12,665,202 - 12,713,834 (-)	NCBI
Rnor_5.0	12	14,709,090 - 14,756,138 (-)	NCBI

Sequence:

show sequence

TCTGGGATTAAAGTCACCACACCTAGCCTGGGGCAACTGTTTTTTAAACGTTCTTCAGTGCAGC
CAGGGTGGAAGTTGCCAGGCCAGGTCTGGGGCTGAGGCAGGGAGTGGAAAAGGAAAATTTAGTG
TGCTGTAGCTCGATGCTGTAACTTGATTTCCTTGGGCTGTGAACTATGGGATTTTACTCTGTTT
CCATGGAATCTTGTCCATTCGAAAAACAGAAATAAAAATGGCTCCTGTAGAGTCCAGGTGGAAG
TTAGGAAGAGTGATGACTGGTGTGAGCCATTGCCCTTCCAGCTTCCTCTGTGCTGTGGGCCTCC
TGGGAAAGAGGTCTGCCATGGTTCGTGTGTGAGGAGACAGTAGAGGCTTTTGTATTTGTTATGT
CAAAGTCCATCCATGCTACTGCTGGGTAGGGTGGCACAGACCTGCAAATTCCAGCACAGCAAAT
CTCTGTGATTTGAGGCCATCCTGGGCTGGCAGTTCCAGGCCAGTGAGGGTTACATACCAAAATG
CTGTCTCTAAATACGCAGTGCTGGTACAAGTCCACAGGGTCTAGTGTAGTATTCACAGGAACAC
TGCAAGTTAGGGGTCATAGGAGATACAGTAGTGCCCCGTCAAAAAAAAGTCTGCTTCTGATCAC
TAGAACCTGTGACTGTCACCTTTTATGTGACAAAGGGGCCTCTTGAGAAGGAACTAAGGAGTGA
TGGGAAGATTGTCCTGCACAGTCTGGTGGACACTGTCAGTCATATTCGTTCTTCAAAGTAGAGG
ACAAGTATACAGGCTCCCTGGAACCCTCCAAGTTAGCCAGGCCTGCAACTTACCTCTGGTAAGG
CTGGCTTTAAGCCATTGTTTGGTTTAAGGCAATGGTGGAAAACAAAAACTGACCTGCTGAGGGA
GGTTGCATAGTTTGCAGTTAGATCTGGAAAATCCAGGCTAAGAACATCCAGCTCCAGTGCCCAG
CTAATTCCTCCCTGCCTTGAAAATCCAGCATGTTAAAACTGGAGGCTCTACAGTTTTGTGTTGG
TGATGTGGCCCCTTTAAGAGGACCGGAGGCGGGGCTTGTGGCAGTTGCTTAGAGACCACCTAGC
TCCCCGGACGCGAAGTCTTCCTCAATGCCACTTTTGGATCTGCAGGCCTGGCCAGAGCAAGTGG
GTGAGCACCCTAAAGTAGTCCTGTGAGTAGCACCAAGGTAAAGACCTGGGCCAGTTCCCTTCTT
AGTCTCCCAAGACTTGAACACGTGCTTGGTGCGGTGGAGTGGTACTGTGGCCGTGCCCAGAAAA
AAAGGTAAAACCCATCCATGCTTTGAAACAAAACTGCAGTCTACCGAAGGAATCATTGGCTAAC
TCTGCATCTAAAGAAAACTCCGACATCTTCCAAAGGCCATGGTGAAAGAAAAGAAAAAAGCAGA
CAAAAAGGGAGATAAGTCAGCCCGCTCTCCCTCCTCGATCTCTGATAACCCAGAAGCGGCTAAA
CAAGAAATCAGTGCCAGTAAGCAGGAAGTGGCCCCCAGTGCTGTCATCCCGGTATTGGAAACGC
CACTCAAGCAAACCCCTAAAAGAGACTCGGAACATACATACCAGAGTGAAGATGAAACTCAGTA
TGAAGAACCCATCCTGACCAAACTCATAGTGGAAAGCTACGAAGGGGAGAAAGTCCGTGGACTG
TATGAGGGAGAAGGCTTTGCGGTCTTTCAAGGCGGAAACACCTACCATGATAGATCACTGTGGA
TGCGGGGCAGGCTCAGAGTGGGCACCACACTGCTGCTGCTGTTGCTGCTGCCGTCAGCCAGCAC
ATCCCTGCAGGGAATGTTTTCCGAGGGACTGATGCACGGGCAGGGGACTTACATTTGGGCTGAC
GGATTGAAATACGAGGGGGACTTTGTGAAGAACATCCCCATGAATCATGGCGTGTACACATGGC
CAGATGGCAGCACGTATGAAGGAGAAGTGGTCAACGGCATGAGGAACGGATTCGGTATGTTCAA
GTGTGGCACGCAGCCCGTGTCCTATATTGGCCACTGGTGTCACGGCAAGAGACATGGGAAGGGC
TCCATCTATTACAATCAAGAGGGAACCTCTTGGTATGAAGGAGACTGGGTGTACAACATCAAAA
AGGGCTGGGGAATACGATGCTACAAATCAGGAAACATATACGAAGGCCAGTGGGAGAACAACAT
GCGCCACGGGGAAGGCAGGATGAGGTGGCTCACAACAAACGAGGAGTACACGGGCCACTGGGAG
AAGGGGATCCAGAACGGCTTTGGAACGCACACATGGTTCCTAAAGAGAATCCCCAACTCTCAGT
ATCCTTTGAGAAATGAATACATAGGGGCGTTTGTAAATGGCTTCCGTCATGGACAAGGGAAGTT
TTATTATGCCAGTGGAGCCATGTATGAGGGAGAATGGGTTTCCAACAAAAAGCAGGGCAGGGGC
AGGATAACTTTCAAGAATGGCCGTGTGTATGAAGGTCTGTTTTCCAACGATCACATTGCACAGT
TCTTTGAAGCTGAAATGGATTACTCGTACAGCCTGGACCGTCGGTCAGACATCTCCCAAAGGAG
CCGGCAGGCTCGGGGATCTTCTGTCAGTGCTGACAGGGAGCCTGAAACCCTACGAAAGTTGGAT
GGCAGCGAAAGCCGCTCTGTGTTAGGATCGAGTATTGAGCTGGACTTAAATTTGTTGCTGGACA
TGTACCCTGAGGAAAGCCAAGAAGAAGAAAAGAAGCAGGTGGAATATGCCGTCCTAAGGAACAT
CACAGAGTTAAGAAGGATCTACTGCTTCTACAGCGGCCTTGGGTGTGACCACTCTCTGGATAAC
ACCTTCCTGATGACAAAGCTTCACTTCTGGAGATTTCTGAAAGACTGCAGGTTCCATCACCACA
ACATAACTCTTGCGGATATGGACAGGGTATTGAGTGTCTATAACGGCATCCCAATCGAAGAAAT
CCATTCTCCATTTAGAACCATACTCTTAAGAACATTCCTAAATTACCTCCTGCAGCTGGCCTAC
TACATCCATCACAAAGAATTCCAGAACAGAAGCCCGTCCCTCTTTCTGTGCTTCACAAAGCTGA
TGGCCGAGAACATCCATCCACACGCCTGCCAGGTGAAAGGTCACTTATTCAATGAGCAGCAGCG
GACACTCTACTCAATGAATTACATCGATAAGTGCTGGGAAATTTACACAGCCTACTGCAGACCG
AACGAAGCCCCACCCTATGAGCTGACAATGAAGATGAGATATTTCCTCTGGATGCTGAAAGACT
TTAGGATGATAAATAAGGAGTTAACTGCGACCAAATTCATGAGGGTGATAGCGGAGGACAACCC
TTTCGTATATGATGGAATGGACAGCAACTTTGAACTTGAGCTAGTTTTCCTGGAGTTCTTCGAA
GCTCTGTTGTGCTTCTCTCTCTGCTGCATGTTTGACCAGATGACTAGATCCTATTTAAAAGCCC
CGTACGATGACGTCACTACAAACCGATATGGCAGCACTCAGACGGTACTAAACCAGAGCATCCA
CAGGAGCCCAAGTGGGGCCACAAGCCATGACTCCGAAGTCCACTTCAGCAGCACCAAGTCGTCC
TTAGACAAGATAGGAGTCCTGCCCGATGGTAAAATCAGGCAATCAGAGCCCAAGCTCAAGAAGT
CGCTGAGTGAGGACAAAGTCTCCAAAATGAACCTCAAGGCTCAAGGAAGAGGGCTGGTGTTTAT
GTCTCCACATGGTGAGAAATATGAAAAGTCCAAAGATGAACAGAAAGAGAAACTCAACATGTGG
GTGAACAACCTCTACGTCTTCTTCGTCAGTGTGCTCTTCAGCGCCTACAAACACGAGGAGGCGC
TCAAGGAGAAGGTGGAGGAGAACAGGCTCCAGGAAGCAGTGCTGGCTCAGCAGAAGCAGATCGA
GAACGAGGAGCTGGAGGCCAGGCTGAACATCCTACGGGAAGAAGAGGCCAGGAGACAAGACTTT
GAACTTGACATCACTGTGCTCAAGGAGCCACCGGAGGTCCCAGCCGTACAGCCGCTCACACCCA
GCCCCCCTAAAGAGGACTTGGTTTCCATGCAGACTAGCAAGGCCAGCCCAGGCAAGAAGAAGAA
GAAGTGAAGGCACTCGGTGTCATGGTGAGCTGCAAGCAGACAGAAAGCTGTGACAAATGTCCCC
AAAAATAAAGTGTTTGCATTTA

hide sequence

RefSeq Acc Id:

XM_006248859 ⟹ XP_006248921

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	15,741,105 - 15,788,887 (-)	NCBI
mRatBN7.2	12	10,627,434 - 10,675,227 (-)	NCBI
Rnor_6.0	12	12,665,202 - 12,713,834 (-)	NCBI
Rnor_5.0	12	14,709,090 - 14,756,138 (-)	NCBI

Sequence:

show sequence

TCTGGGATTAAAGTCACCACACCTAGCCTGGGGCAACTGTTTTTTAAACGTTCTTCAGTGCAGC
CAGGGTGGAAGTTGCCAGGCCAGGTCTGGGGCTGAGGCAGGGAGTGGAAAAGGAAAATTTAGTG
TGCTGTAGCTCGATGCTGTAACTTGATTTCCTTGGGCTGTGAACTATGGGATTTTACTCTGTTT
CCATGGAATCTTGTCCATTCGAAAAACAGAAATAAAAATGGCTCCTGTAGAGTCCAGGTGGAAG
TTAGGAAGAGTGATGACTGGTGTGAGCCATTGCCCTTCCAGCTTCCTCTGTGCTGTGGGCCTCC
TGGGAAAGAGGTCTGCCATGGTTCGTGTGTGAGGAGACAGTAGAGGCTTTTGTATTTGTTATGT
CAAAGTCCATCCATGCTACTGCTGGGTAGGGTGGCACAGACCTGCAAATTCCAGCACAGCAAAT
CTCTGTGATTTGAGGCCATCCTGGGCTGGCAGTTCCAGGCCAGTGAGGGTTACATACCAAAATG
CTGTCTCTAAATACGCAGTGCTGGTACAAGTCCACAGGGTCTAGTGTAGTATTCACAGGAACAC
TGCAAGTTAGGGGTCATAGGAGATACAGTAGTGCCCCGTCAAAAAAAAGTCTGCTTCTGATCAC
TAGAACCTGTGACTGTCACCTTTTATGTGACAAAGGGGCCTCTTGAGAAGGAACTAAGGAGTGA
TGGGAAGATTGTCCTGCACAGTCTGGTGGACACTGTCAGTCATATTCGTTCTTCAAAGTAGAGG
ACAAGTATACAGGCTCCCTGGAACCCTCCAAGTTAGCCAGGCCTGCAACTTACCTCTGGTAAGG
CTGGCTTTAAGCCATTGTTTGGTTTAAGGCAATGGTGGAAAACAAAAACTGACCTGCTGAGGGA
GGTTGCATAGTTTGCAGTTAGATCTGGAAAATCCAGGCTAAGAACATCCAGCTCCAGTGCCCAG
CTAATTCCTCCCTGCCTTGAAAATCCAGCATGTTAAAACTGGAGGCTCTACAGTTTTGTGTTGG
TGATGTGGCCCCTTTAAGAGGACCGGAGGCGGGGCTTGTGGCAGTTGCTTAGAGACCACCTAGC
TCCCCGGACGCGAAGTCTTCCTCAATGCCACTTTTGGATCTGCAGGCCTGGCCAGAGCAAGTGG
GTAAAACCCATCCATGCTTTGAAACAAAACTGCAGTCTACCGAAGGAATCATTGGCTAACTCTG
CATCTAAAGAAAACTCCGACATCTTCCAAAGGCCATGGTGAAAGAAAAGAAAAAAGCAGACAAA
AAGGGAGATAAGTCAGCCCGCTCTCCCTCCTCGATCTCTGATAACCCAGAAGCGGCTAAACAAG
AAATCAGTGCCAGTAAGCAGGAAGTGGCCCCCAGTGCTGTCATCCCGGTATTGGAAACGCCACT
CAAGCAAACCCCTAAAAGAGACTCGGAACATACATACCAGAGTGAAGATGAAACTCAGTATGAA
GAACCCATCCTGACCAAACTCATAGTGGAAAGCTACGAAGGGGAGAAAGTCCGTGGACTGTATG
AGGGAGAAGGCTTTGCGGTCTTTCAAGGCGGAAACACCTACCATGATAGATCACTGTGGATGCG
GGGCAGGCTCAGAGTGGGCACCACACTGCTGCTGCTGTTGCTGCTGCCGTCAGCCAGCACATCC
CTGCAGGGAATGTTTTCCGAGGGACTGATGCACGGGCAGGGGACTTACATTTGGGCTGACGGAT
TGAAATACGAGGGGGACTTTGTGAAGAACATCCCCATGAATCATGGCGTGTACACATGGCCAGA
TGGCAGCACGTATGAAGGAGAAGTGGTCAACGGCATGAGGAACGGATTCGGTATGTTCAAGTGT
GGCACGCAGCCCGTGTCCTATATTGGCCACTGGTGTCACGGCAAGAGACATGGGAAGGGCTCCA
TCTATTACAATCAAGAGGGAACCTCTTGGTATGAAGGAGACTGGGTGTACAACATCAAAAAGGG
CTGGGGAATACGATGCTACAAATCAGGAAACATATACGAAGGCCAGTGGGAGAACAACATGCGC
CACGGGGAAGGCAGGATGAGGTGGCTCACAACAAACGAGGAGTACACGGGCCACTGGGAGAAGG
GGATCCAGAACGGCTTTGGAACGCACACATGGTTCCTAAAGAGAATCCCCAACTCTCAGTATCC
TTTGAGAAATGAATACATAGGGGCGTTTGTAAATGGCTTCCGTCATGGACAAGGGAAGTTTTAT
TATGCCAGTGGAGCCATGTATGAGGGAGAATGGGTTTCCAACAAAAAGCAGGGCAGGGGCAGGA
TAACTTTCAAGAATGGCCGTGTGTATGAAGGTCTGTTTTCCAACGATCACATTGCACAGTTCTT
TGAAGCTGAAATGGATTACTCGTACAGCCTGGACCGTCGGTCAGACATCTCCCAAAGGAGCCGG
CAGGCTCGGGGATCTTCTGTCAGTGCTGACAGGGAGCCTGAAACCCTACGAAAGTTGGATGGCA
GCGAAAGCCGCTCTGTGTTAGGATCGAGTATTGAGCTGGACTTAAATTTGTTGCTGGACATGTA
CCCTGAGGAAAGCCAAGAAGAAGAAAAGAAGCAGGTGGAATATGCCGTCCTAAGGAACATCACA
GAGTTAAGAAGGATCTACTGCTTCTACAGCGGCCTTGGGTGTGACCACTCTCTGGATAACACCT
TCCTGATGACAAAGCTTCACTTCTGGAGATTTCTGAAAGACTGCAGGTTCCATCACCACAACAT
AACTCTTGCGGATATGGACAGGGTATTGAGTGTCTATAACGGCATCCCAATCGAAGAAATCCAT
TCTCCATTTAGAACCATACTCTTAAGAACATTCCTAAATTACCTCCTGCAGCTGGCCTACTACA
TCCATCACAAAGAATTCCAGAACAGAAGCCCGTCCCTCTTTCTGTGCTTCACAAAGCTGATGGC
CGAGAACATCCATCCACACGCCTGCCAGGTGAAAGGTCACTTATTCAATGAGCAGCAGCGGACA
CTCTACTCAATGAATTACATCGATAAGTGCTGGGAAATTTACACAGCCTACTGCAGACCGAACG
AAGCCCCACCCTATGAGCTGACAATGAAGATGAGATATTTCCTCTGGATGCTGAAAGACTTTAG
GATGATAAATAAGGAGTTAACTGCGACCAAATTCATGAGGGTGATAGCGGAGGACAACCCTTTC
GTATATGATGGAATGGACAGCAACTTTGAACTTGAGCTAGTTTTCCTGGAGTTCTTCGAAGCTC
TGTTGTGCTTCTCTCTCTGCTGCATGTTTGACCAGATGACTAGATCCTATTTAAAAGCCCCGTA
CGATGACGTCACTACAAACCGATATGGCAGCACTCAGACGGTACTAAACCAGAGCATCCACAGG
AGCCCAAGTGGGGCCACAAGCCATGACTCCGAAGTCCACTTCAGCAGCACCAAGTCGTCCTTAG
ACAAGATAGGAGTCCTGCCCGATGGTAAAATCAGGCAATCAGAGCCCAAGCTCAAGAAGTCGCT
GAGTGAGGACAAAGTCTCCAAAATGAACCTCAAGGCTCAAGGAAGAGGGCTGGTGTTTATGTCT
CCACATGGTGAGAAATATGAAAAGTCCAAAGATGAACAGAAAGAGAAACTCAACATGTGGGTGA
ACAACCTCTACGTCTTCTTCGTCAGTGTGCTCTTCAGCGCCTACAAACACGAGGAGGCGCTCAA
GGAGAAGGTGGAGGAGAACAGGCTCCAGGAAGCAGTGCTGGCTCAGCAGAAGCAGATCGAGAAC
GAGGAGCTGGAGGCCAGGCTGAACATCCTACGGGAAGAAGAGGCCAGGAGACAAGACTTTGAAC
TTGACATCACTGTGCTCAAGGAGCCACCGGAGGTCCCAGCCGTACAGCCGCTCACACCCAGCCC
CCCTAAAGAGGACTTGGTTTCCATGCAGACTAGCAAGGCCAGCCCAGGCAAGAAGAAGAAGAAG
TGAAGGCACTCGGTGTCATGGTGAGCTGCAAGCAGACAGAAAGCTGTGACAAATGTCCCCAAAA
ATAAAGTGTTTGCATTTA

hide sequence

RefSeq Acc Id:

XM_006248860 ⟹ XP_006248922

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	15,741,105 - 15,788,861 (-)	NCBI
mRatBN7.2	12	10,627,434 - 10,675,197 (-)	NCBI
Rnor_6.0	12	12,665,202 - 12,713,834 (-)	NCBI
Rnor_5.0	12	14,709,090 - 14,756,138 (-)	NCBI

Sequence:

show sequence

TCTGGGATTAAAGTCACCACACCTAGCCTGGGGCAACTGTTTTTTAAACGTTCTTCAGTGCAGC
CAGGGTGGAAGTTGCCAGGCCAGGTCTGGGGCTGAGGCAGGGAGTGGAAAAGGAAAATTTAGTG
TGCTGTAGCTCGATGCTGTAACTTGATTTCCTTGGGCTGTGAACTATGGGATTTTACTCTGTTT
CCATGGAATCTTGTCCATTCGAAAAACAGAAATAAAAATGGCTCCTGTAGAGTCCAGGTGGAAG
TTAGGAAGAGTGATGACTGGTGTGAGCCATTGCCCTTCCAGCTTCCTCTGTGCTGTGGGCCTCC
TGGGAAAGAGGTCTGCCATGGTTCGTGTGTGAGGAGACAGTAGAGGCTTTTGTATTTGTTATGT
CAAAGTCCATCCATGCTACTGCTGGGTAGGGTGGCACAGACCTGCAAATTCCAGCACAGCAAAT
CTCTGTGATTTGAGGCCATCCTGGGCTGGCAGTTCCAGGCCAGTGAGGGTTACATACCAAAATG
CTGTCTCTAAATACGCAGTGCTGGTACAAGTCCACAGGGTCTAGTGTAGTATTCACAGGAACAC
TGCAAGTTAGGGGTCATAGGAGATACAGTAGTGCCCCGTCAAAAAAAAGTCTGCTTCTGATCAC
TAGAACCTGTGACTGTCACCTTTTATGTGACAAAGGGGCCTCTTGAGAAGGAACTAAGGAGTGA
TGGGAAGATTGTCCTGCACAGTCTGGTGGACACTGTCAGTCATATTCGTTCTTCAAAGTAGAGG
ACAAGTATACAGGCTCCCTGGAACCCTCCAAGTTAGCCAGGCCTGCAACTTACCTCTGGTAAGG
CTGGCTTTAAGCCATTGTTTGGTTTAAGGCAATGGTGGAAAACAAAAACTGACCTGCTGAGGGA
GGTTGCATAGTTTGCAGTTAGATCTGGAAAATCCAGGCTAAGAACATCCAGCTCCAGTGCCCAG
CTAATTCCTCCCTGCCTTGAAAATCCAGCATGTTAAAACTGGAGGCTCTACAGTTTTGTGTTGG
TGATGTGGCCCCTTTAAGAGGACCGGAGGCGGGGCTTGTGGCAGTTGCTTAGAGACCACCTAGC
TCCCCGGACGCGAAGTCTTCCTCAATGCCACTTTTGGATCTGCAGGCCTGGCCAGAGCAAGTGG
GTGAGCACCCTAAAGTAGTCCTGTGAGTAGCACCAAGGTAAAGACCTGGGCCAGTTCCCTTCTT
AGTCTCCCAAGACTTGAACACGTGCTTGGTGCGGTGGAGTGGTACTGTGGCCGTGCCCAGAAAA
AAAGGTAAAACCCATCCATGCTTTGAAACAAAACTGCAGTCTACCGAAGGAATCATTGGCTAAC
TCTGCATCTAAAGAAAACTCCGACATCTTCCAAAGGCCATGGTGAAAGAAAAGAAAAAAGCAGA
CAAAAAGGGAGATAAGTCAGCCCGCTCTCCCTCCTCGATCTCTGATAACCCAGAAGCGGCTAAA
CAAGAAATCAGTGCCAGTAAGCAGGAAGTGGCCCCCAGTGCTGTCATCCCGGTATTGGAAACGC
CACTCAAGCAAACCCCTAAAAGAGACTCGGAACATACATACCAGAGTGAAGATGAAACTCAGTA
TGAAGAACCCATCCTGACCAAACTCATAGTGGAAAGCTACGAAGGGGAGAAAGTCCGTGGACTG
TATGAGGGAGAAGGCTTTGCGGTCTTTCAAGGCGGAAACACCTACCATGATAGATCACTGTGGA
TGCGGGGCAGGCTCAGAGTGGGCACCACACTGCTGCTGCTGTTGCTGCTGCCGTCAGCCAGCAC
ATCCCTGCAGGGAATGTTTTCCGAGGGACTGATGCACGGGCAGGGGACTTACATTTGGGCTGAC
GGATTGAAATACGAGGGGGACTTTGTGAAGAACATCCCCATGAATCATGGCGTGTACACATGGC
CAGATGGCAGCACGTATGAAGGAGAAGTGGTCAACGGCATGAGGAACGGATTCGGTATGTTCAA
GTGTGGCACGCAGCCCGTGTCCTATATTGGCCACTGGTGTCACGGCAAGAGACATGGGAAGGGC
TCCATCTATTACAATCAAGAGGGAACCTCTTGGTATGAAGGAGACTGGGTGTACAACATCAAAA
AGGGCTGGGGAATACGATGCTACAAATCAGGAAACATATACGAAGGCCAGTGGGAGAACAACAT
GCGCCACGGGGAAGGCAGGATGAGGTGGCTCACAACAAACGAGGAGTACACGGGCCACTGGGAG
AAGGGGATCCAGAACGGCTTTGGAACGCACACATGGTTCCTAAAGAGAATCCCCAACTCTCAGT
ATCCTTTGAGAAATGAATACATAGGGGCGTTTGTAAATGGCTTCCGTCATGGACAAGGGAAGTT
TTATTATGCCAGTGGAGCCATGTATGAGGGAGAATGGGTTTCCAACAAAAAGCAGGGCAGGGGC
AGGATAACTTTCAAGAATGGCCGTGTGTATGAAGGTCTGTTTTCCAACGATCACATTGCACAGT
TCTTTGAAGCTGAAATGGATTACTCGTACAGCCTGGACCGTCGGTCAGACATCTCCCAAAGGAG
CCGGCAGGCTCGGGGATCTTCTGTCAGTGCTGACAGGGAGCCTGAAACCCTACGAAAGTTGGAT
GGCAGCGAAAGCCGCTCTGTGTTAGGATCGAGTATTGAGCTGGACTTAAATTTGTTGCTGGACA
TGTACCCTGAGGAAAGCCAAGAAGAAGAAAAGAAGCAGGTGGAATATGCCGTCCTAAGGAACAT
CACAGAGTTAAGAAGGATCTACTGCTTCTACAGCGGCCTTGGGTGTGACCACTCTCTGGATAAC
ACCTTCCTGATGACAAAGCTTCACTTCTGGAGATTTCTGAAAGACTGCAGGTTCCATCACCACA
ACATAACTCTTGCGGATATGGACAGGGTATTGAGTGTCTATAACGGCATCCCAATCGAAGAAAT
CCATTCTCCATTTAGAACCATACTCTTAAGAACATTCCTAAATTACCTCCTGCAGCTGGCCTAC
TACATCCATCACAAAGAATTCCAGAACAGAAGCCCGTCCCTCTTTCTGTGCTTCACAAAGCTGA
TGGCCGAGAACATCCATCCACACGCCTGCCAGGTGAAAGGTCACTTATTCAATGAGCAGCAGCG
GACACTCTACTCAATGAATTACATCGATAAGTGCTGGGAAATTTACACAGCCTACTGCAGACCG
AACGAAGCCCCACCCTATGAGCTGACAATGAAGATGAGATATTTCCTCTGGATGCTGAAAGACT
TTAGGATGATAAATAAGGAGTTAACTGCGACCAAATTCATGAGGGTGATAGCGGAGGACAACCC
TTTCGTATATGATGGAATGGACAGCAACTTTGAACTTGAGCTAGTTTTCCTGGAGTTCTTCGAA
GCTCTGTTGTGCTTCTCTCTCTGCTGCATGTTTGACCAGATGACTAGATCCTATTTAAAAGCCC
CGTACGATGACGTCACTACAAACCGATATGGCAGCACTCAGACGAGCATCCACAGGAGCCCAAG
TGGGGCCACAAGCCATGACTCCGAAGTCCACTTCAGCAGCACCAAGTCGTCCTTAGACAAGATA
GGAGTCCTGCCCGATGGTAAAATCAGGCAATCAGAGCCCAAGCTCAAGAAGTCGCTGAGTGAGG
ACAAAGTCTCCAAAATGAACCTCAAGGCTCAAGGAAGAGGGCTGGTGTTTATGTCTCCACATGG
TGAGAAATATGAAAAGTCCAAAGATGAACAGAAAGAGAAACTCAACATGTGGGTGAACAACCTC
TACGTCTTCTTCGTCAGTGTGCTCTTCAGCGCCTACAAACACGAGGAGGCGCTCAAGGAGAAGG
TGGAGGAGAACAGGCTCCAGGAAGCAGTGCTGGCTCAGCAGAAGCAGATCGAGAACGAGGAGCT
GGAGGCCAGGCTGAACATCCTACGGGAAGAAGAGGCCAGGAGACAAGACTTTGAACTTGACATC
ACTGTGCTCAAGGAGCCACCGGAGGTCCCAGCCGTACAGCCGCTCACACCCAGCCCCCCTAAAG
AGGACTTGGTTTCCATGCAGACTAGCAAGGCCAGCCCAGGCAAGAAGAAGAAGAAGTGAAGGCA
CTCGGTGTCATGGTGAGCTGCAAGCAGACAGAAAGCTGTGACAAATGTCCCCAAAAATAAAGTG
TTTGCATTTA

hide sequence

RefSeq Acc Id:

XM_006248861 ⟹ XP_006248923

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	15,741,105 - 15,788,860 (-)	NCBI
mRatBN7.2	12	10,627,434 - 10,675,196 (-)	NCBI
Rnor_6.0	12	12,665,202 - 12,713,831 (-)	NCBI
Rnor_5.0	12	14,709,090 - 14,756,138 (-)	NCBI

Sequence:

show sequence

GGGATTAAAGTCACCACACCTAGCCTGGGGCAACTGTTTTTTAAACGTTCTTCAGTGCAGCCAG
GGTGGAAGTTGCCAGGCCAGGTCTGGGGCTGAGGCAGGGAGTGGAAAAGGAAAATTTAGTGTGC
TGTAGCTCGATGCTGTAACTTGATTTCCTTGGGCTGTGAACTATGGGATTTTACTCTGTTTCCA
TGGAATCTTGTCCATTCGAAAAACAGAAATAAAAATGGCTCCTGTAGAGTCCAGGTGGAAGTTA
GGAAGAGTGATGACTGGTGTGAGCCATTGCCCTTCCAGCTTCCTCTGTGCTGTGGGCCTCCTGG
GAAAGAGGTCTGCCATGGTTCGTGTGTGAGGAGACAGTAGAGGCTTTTGTATTTGTTATGTCAA
AGTCCATCCATGCTACTGCTGGGTAGGGTGGCACAGACCTGCAAATTCCAGCACAGCAAATCTC
TGTGATTTGAGGCCATCCTGGGCTGGCAGTTCCAGGCCAGTGAGGGTTACATACCAAAATGCTG
TCTCTAAATACGCAGTGCTGGTACAAGTCCACAGGGTCTAGTGTAGTATTCACAGGAACACTGC
AAGTTAGGGGTCATAGGAGATACAGTAGTGCCCCGTCAAAAAAAAGTCTGCTTCTGATCACTAG
AACCTGTGACTGTCACCTTTTATGTGACAAAGGGGCCTCTTGAGAAGGAACTAAGGAGTGATGG
GAAGATTGTCCTGCACAGTCTGGTGGACACTGTCAGTCATATTCGTTCTTCAAAGTAGAGGACA
AGTATACAGGCTCCCTGGAACCCTCCAAGTTAGCCAGGCCTGCAACTTACCTCTGGTAAGGCTG
GCTTTAAGCCATTGTTTGGTTTAAGGCAATGGTGGAAAACAAAAACTGACCTGCTGAGGGAGGT
TGCATAGTTTGCAGTTAGATCTGGAAAATCCAGGCTAAGAACATCCAGCTCCAGTGCCCAGCTA
ATTCCTCCCTGCCTTGAAAATCCAGCATGTTAAAACTGGAGGCTCTACAGTTTTGTGTTGGTGA
TGTGGCCCCTTTAAGAGGACCGGAGGCGGGGCTTGTGGCAGTTGCTTAGAGACCACCTAGCTCC
CCGGACGCGAAGTCTTCCTCAATGCCACTTTTGGATCTGCAGGCCTGGCCAGAGCAAGTGGGTG
AGCACCCTAAAGTAGTCCTGTGAGTAGCACCAAGGTAAAGACCTGGGCCAGTTCCCTTCTTAGT
CTCCCAAGACTTGAACACGTGCTTGGTGCGGTGGAGTGGTACTGTGGCCGTGCCCAGAAAAAAA
GGTAAAACCCATCCATGCTTTGAAACAAAACTGCAGTCTACCGAAGGAATCATTGGCTAACTCT
GCATCTAAAGAAAACTCCGACATCTTCCAAAGGCCATGGTGAAAGAAAAGAAAAAAGCAGACAA
AAAGGGAGATAAGTCAGCCCGCTCTCCCTCCTCGATCTCTGATAACCCAGAAGCGGCTAAACAA
GAAATCAGTGCCAGTAAGCAGGAAGTGGCCCCCAGTGCTGTCATCCCGGTATTGGAAACGCCAC
TCAAGCAAACCCCTAAAAGAGACTCGGAACATACATACCAGAGTGAAGATGAAACTCAGTATGA
AGAACCCATCCTGACCAAACTCATAGTGGAAAGCTACGAAGGGGAGAAAGTCCGTGGACTGTAT
GAGGGAGAAGGCTTTGCGGTCTTTCAAGGCGGAAACACCTACCATGGAATGTTTTCCGAGGGAC
TGATGCACGGGCAGGGGACTTACATTTGGGCTGACGGATTGAAATACGAGGGGGACTTTGTGAA
GAACATCCCCATGAATCATGGCGTGTACACATGGCCAGATGGCAGCACGTATGAAGGAGAAGTG
GTCAACGGCATGAGGAACGGATTCGGTATGTTCAAGTGTGGCACGCAGCCCGTGTCCTATATTG
GCCACTGGTGTCACGGCAAGAGACATGGGAAGGGCTCCATCTATTACAATCAAGAGGGAACCTC
TTGGTATGAAGGAGACTGGGTGTACAACATCAAAAAGGGCTGGGGAATACGATGCTACAAATCA
GGAAACATATACGAAGGCCAGTGGGAGAACAACATGCGCCACGGGGAAGGCAGGATGAGGTGGC
TCACAACAAACGAGGAGTACACGGGCCACTGGGAGAAGGGGATCCAGAACGGCTTTGGAACGCA
CACATGGTTCCTAAAGAGAATCCCCAACTCTCAGTATCCTTTGAGAAATGAATACATAGGGGCG
TTTGTAAATGGCTTCCGTCATGGACAAGGGAAGTTTTATTATGCCAGTGGAGCCATGTATGAGG
GAGAATGGGTTTCCAACAAAAAGCAGGGCAGGGGCAGGATAACTTTCAAGAATGGCCGTGTGTA
TGAAGGTCTGTTTTCCAACGATCACATTGCACAGTTCTTTGAAGCTGAAATGGATTACTCGTAC
AGCCTGGACCGTCGGTCAGACATCTCCCAAAGGAGCCGGCAGGCTCGGGGATCTTCTGTCAGTG
CTGACAGGGAGCCTGAAACCCTACGAAAGTTGGATGGCAGCGAAAGCCGCTCTGTGTTAGGATC
GAGTATTGAGCTGGACTTAAATTTGTTGCTGGACATGTACCCTGAGGAAAGCCAAGAAGAAGAA
AAGAAGCAGGTGGAATATGCCGTCCTAAGGAACATCACAGAGTTAAGAAGGATCTACTGCTTCT
ACAGCGGCCTTGGGTGTGACCACTCTCTGGATAACACCTTCCTGATGACAAAGCTTCACTTCTG
GAGATTTCTGAAAGACTGCAGGTTCCATCACCACAACATAACTCTTGCGGATATGGACAGGGTA
TTGAGTGTCTATAACGGCATCCCAATCGAAGAAATCCATTCTCCATTTAGAACCATACTCTTAA
GAACATTCCTAAATTACCTCCTGCAGCTGGCCTACTACATCCATCACAAAGAATTCCAGAACAG
AAGCCCGTCCCTCTTTCTGTGCTTCACAAAGCTGATGGCCGAGAACATCCATCCACACGCCTGC
CAGGTGAAAGGTCACTTATTCAATGAGCAGCAGCGGACACTCTACTCAATGAATTACATCGATA
AGTGCTGGGAAATTTACACAGCCTACTGCAGACCGAACGAAGCCCCACCCTATGAGCTGACAAT
GAAGATGAGATATTTCCTCTGGATGCTGAAAGACTTTAGGATGATAAATAAGGAGTTAACTGCG
ACCAAATTCATGAGGGTGATAGCGGAGGACAACCCTTTCGTATATGATGGAATGGACAGCAACT
TTGAACTTGAGCTAGTTTTCCTGGAGTTCTTCGAAGCTCTGTTGTGCTTCTCTCTCTGCTGCAT
GTTTGACCAGATGACTAGATCCTATTTAAAAGCCCCGTACGATGACGTCACTACAAACCGATAT
GGCAGCACTCAGACGGTACTAAACCAGAGCATCCACAGGAGCCCAAGTGGGGCCACAAGCCATG
ACTCCGAAGTCCACTTCAGCAGCACCAAGTCGTCCTTAGACAAGATAGGAGTCCTGCCCGATGG
TAAAATCAGGCAATCAGAGCCCAAGCTCAAGAAGTCGCTGAGTGAGGACAAAGTCTCCAAAATG
AACCTCAAGGCTCAAGGAAGAGGGCTGGTGTTTATGTCTCCACATGGTGAGAAATATGAAAAGT
CCAAAGATGAACAGAAAGAGAAACTCAACATGTGGGTGAACAACCTCTACGTCTTCTTCGTCAG
TGTGCTCTTCAGCGCCTACAAACACGAGGAGGCGCTCAAGGAGAAGGTGGAGGAGAACAGGCTC
CAGGAAGCAGTGCTGGCTCAGCAGAAGCAGATCGAGAACGAGGAGCTGGAGGCCAGGCTGAACA
TCCTACGGGAAGAAGAGGCCAGGAGACAAGACTTTGAACTTGACATCACTGTGCTCAAGGAGCC
ACCGGAGGTCCCAGCCGTACAGCCGCTCACACCCAGCCCCCCTAAAGAGGACTTGGTTTCCATG
CAGACTAGCAAGGCCAGCCCAGGCAAGAAGAAGAAGAAGTGAAGGCACTCGGTGTCATGGTGAG
CTGCAAGCAGACAGAAAGCTGTGACAAATGTCCCCAAAAATAAAGTGTTTGCATTTA

hide sequence

RefSeq Acc Id:

XM_039089176 ⟹ XP_038945104

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	15,741,105 - 15,788,843 (-)	NCBI
mRatBN7.2	12	10,627,434 - 10,675,189 (-)	NCBI

RefSeq Acc Id:

XM_063271135 ⟹ XP_063127205

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	15,741,105 - 15,788,851 (-)	NCBI

RefSeq Acc Id:

XM_063271136 ⟹ XP_063127206

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	15,741,105 - 15,788,860 (-)	NCBI

RefSeq Acc Id:

XM_063271137 ⟹ XP_063127207

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	15,741,105 - 15,788,887 (-)	NCBI

RefSeq Acc Id:

XM_063271138 ⟹ XP_063127208

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	15,741,105 - 15,788,852 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001013889	(Get FASTA)	NCBI Sequence Viewer
	NP_001420366	(Get FASTA)	NCBI Sequence Viewer
	XP_006248920	(Get FASTA)	NCBI Sequence Viewer
	XP_006248921	(Get FASTA)	NCBI Sequence Viewer
	XP_006248922	(Get FASTA)	NCBI Sequence Viewer
	XP_006248923	(Get FASTA)	NCBI Sequence Viewer
	XP_038945104	(Get FASTA)	NCBI Sequence Viewer
	XP_063127205	(Get FASTA)	NCBI Sequence Viewer
	XP_063127206	(Get FASTA)	NCBI Sequence Viewer
	XP_063127207	(Get FASTA)	NCBI Sequence Viewer
	XP_063127208	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH81935	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000037688
	ENSRNOP00000037688.5
	ENSRNOP00000102642
GenBank Protein	Q66HB5	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001013889 ⟸ NM_001013867

- UniProtKB:

Q66HB5 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MVKEKKKADKKGDKSARSPSSISDNPEAAKQEISASKQEVAPSAVIPVLETPLKQTPKRDSEHT
YQSEDETQYEEPILTKLIVESYEGEKVRGLYEGEGFAVFQGGNTYHGMFSEGLMHGQGTYIWAD
GLKYEGDFVKNIPMNHGVYTWPDGSTYEGEVVNGMRNGFGMFKCGTQPVSYIGHWCHGKRHGKG
SIYYNQEGTSWYEGDWVYNIKKGWGIRCYKSGNIYEGQWENNMRHGEGRMRWLTTNEEYTGHWE
KGIQNGFGTHTWFLKRIPNSQYPLRNEYIGAFVNGFRHGQGKFYYASGAMYEGEWVSNKKQGRG
RITFKNGRVYEGLFSNDHIAQFFEAEMDYSYSLDRRSDISQRSRQARGSSVSADREPETLRKLD
GSESRSVLGSSIELDLNLLLDMYPEESQEEEKKQVEYAVLRNITELRRIYCFYSGLGCDHSLDN
TFLMTKLHFWRFLKDCRFHHHNITLADMDRVLSVYNGIPIEEIHSPFRTILLRTFLNYLLQLAY
YIHHKEFQNRSPSLFLCFTKLMAENIHPHACQVKGHLFNEQQRTLYSMNYIDKCWEIYTAYCRP
NEAPPYELTMKMRYFLWMLKDFRMINKELTATKFMRVIAEDNPFVYDGMDSNFELELVFLEFFE
ALLCFSLCCMFDQMTRSYLKAPYDDVTTNRYGSTQTVLNQSIHRSPSGATSHDSEVHFSSTKSS
LDKIGVLPDGKIRQSEPKLKKSLSEDKVSKMNLKAQGRGLVFMSPHGEKYEKSKDEQKEKLNMW
VNNLYVFFVSVLFSAYKHEEALKEKVEENRLQEAVLAQQKQIENEELEARLNILREEEARRQDF
ELDITVLKEPPEVPAVQPLTPSPPKEDLVSMQTSKASPGKKKKK

hide sequence

RefSeq Acc Id:

XP_006248921 ⟸ XM_006248859

- Peptide Label:

isoform X1

- Sequence:

show sequence

MVKEKKKADKKGDKSARSPSSISDNPEAAKQEISASKQEVAPSAVIPVLETPLKQTPKRDSEHT
YQSEDETQYEEPILTKLIVESYEGEKVRGLYEGEGFAVFQGGNTYHDRSLWMRGRLRVGTTLLL
LLLLPSASTSLQGMFSEGLMHGQGTYIWADGLKYEGDFVKNIPMNHGVYTWPDGSTYEGEVVNG
MRNGFGMFKCGTQPVSYIGHWCHGKRHGKGSIYYNQEGTSWYEGDWVYNIKKGWGIRCYKSGNI
YEGQWENNMRHGEGRMRWLTTNEEYTGHWEKGIQNGFGTHTWFLKRIPNSQYPLRNEYIGAFVN
GFRHGQGKFYYASGAMYEGEWVSNKKQGRGRITFKNGRVYEGLFSNDHIAQFFEAEMDYSYSLD
RRSDISQRSRQARGSSVSADREPETLRKLDGSESRSVLGSSIELDLNLLLDMYPEESQEEEKKQ
VEYAVLRNITELRRIYCFYSGLGCDHSLDNTFLMTKLHFWRFLKDCRFHHHNITLADMDRVLSV
YNGIPIEEIHSPFRTILLRTFLNYLLQLAYYIHHKEFQNRSPSLFLCFTKLMAENIHPHACQVK
GHLFNEQQRTLYSMNYIDKCWEIYTAYCRPNEAPPYELTMKMRYFLWMLKDFRMINKELTATKF
MRVIAEDNPFVYDGMDSNFELELVFLEFFEALLCFSLCCMFDQMTRSYLKAPYDDVTTNRYGST
QTVLNQSIHRSPSGATSHDSEVHFSSTKSSLDKIGVLPDGKIRQSEPKLKKSLSEDKVSKMNLK
AQGRGLVFMSPHGEKYEKSKDEQKEKLNMWVNNLYVFFVSVLFSAYKHEEALKEKVEENRLQEA
VLAQQKQIENEELEARLNILREEEARRQDFELDITVLKEPPEVPAVQPLTPSPPKEDLVSMQTS
KASPGKKKKK

hide sequence

RefSeq Acc Id:

XP_006248922 ⟸ XM_006248860

- Peptide Label:

isoform X2

- Sequence:

show sequence

MVKEKKKADKKGDKSARSPSSISDNPEAAKQEISASKQEVAPSAVIPVLETPLKQTPKRDSEHT
YQSEDETQYEEPILTKLIVESYEGEKVRGLYEGEGFAVFQGGNTYHDRSLWMRGRLRVGTTLLL
LLLLPSASTSLQGMFSEGLMHGQGTYIWADGLKYEGDFVKNIPMNHGVYTWPDGSTYEGEVVNG
MRNGFGMFKCGTQPVSYIGHWCHGKRHGKGSIYYNQEGTSWYEGDWVYNIKKGWGIRCYKSGNI
YEGQWENNMRHGEGRMRWLTTNEEYTGHWEKGIQNGFGTHTWFLKRIPNSQYPLRNEYIGAFVN
GFRHGQGKFYYASGAMYEGEWVSNKKQGRGRITFKNGRVYEGLFSNDHIAQFFEAEMDYSYSLD
RRSDISQRSRQARGSSVSADREPETLRKLDGSESRSVLGSSIELDLNLLLDMYPEESQEEEKKQ
VEYAVLRNITELRRIYCFYSGLGCDHSLDNTFLMTKLHFWRFLKDCRFHHHNITLADMDRVLSV
YNGIPIEEIHSPFRTILLRTFLNYLLQLAYYIHHKEFQNRSPSLFLCFTKLMAENIHPHACQVK
GHLFNEQQRTLYSMNYIDKCWEIYTAYCRPNEAPPYELTMKMRYFLWMLKDFRMINKELTATKF
MRVIAEDNPFVYDGMDSNFELELVFLEFFEALLCFSLCCMFDQMTRSYLKAPYDDVTTNRYGST
QTSIHRSPSGATSHDSEVHFSSTKSSLDKIGVLPDGKIRQSEPKLKKSLSEDKVSKMNLKAQGR
GLVFMSPHGEKYEKSKDEQKEKLNMWVNNLYVFFVSVLFSAYKHEEALKEKVEENRLQEAVLAQ
QKQIENEELEARLNILREEEARRQDFELDITVLKEPPEVPAVQPLTPSPPKEDLVSMQTSKASP
GKKKKK

hide sequence

RefSeq Acc Id:

XP_006248923 ⟸ XM_006248861

- Peptide Label:

isoform X3

- Sequence:

show sequence

MVKEKKKADKKGDKSARSPSSISDNPEAAKQEISASKQEVAPSAVIPVLETPLKQTPKRDSEHT
YQSEDETQYEEPILTKLIVESYEGEKVRGLYEGEGFAVFQGGNTYHGMFSEGLMHGQGTYIWAD
GLKYEGDFVKNIPMNHGVYTWPDGSTYEGEVVNGMRNGFGMFKCGTQPVSYIGHWCHGKRHGKG
SIYYNQEGTSWYEGDWVYNIKKGWGIRCYKSGNIYEGQWENNMRHGEGRMRWLTTNEEYTGHWE
KGIQNGFGTHTWFLKRIPNSQYPLRNEYIGAFVNGFRHGQGKFYYASGAMYEGEWVSNKKQGRG
RITFKNGRVYEGLFSNDHIAQFFEAEMDYSYSLDRRSDISQRSRQARGSSVSADREPETLRKLD
GSESRSVLGSSIELDLNLLLDMYPEESQEEEKKQVEYAVLRNITELRRIYCFYSGLGCDHSLDN
TFLMTKLHFWRFLKDCRFHHHNITLADMDRVLSVYNGIPIEEIHSPFRTILLRTFLNYLLQLAY
YIHHKEFQNRSPSLFLCFTKLMAENIHPHACQVKGHLFNEQQRTLYSMNYIDKCWEIYTAYCRP
NEAPPYELTMKMRYFLWMLKDFRMINKELTATKFMRVIAEDNPFVYDGMDSNFELELVFLEFFE
ALLCFSLCCMFDQMTRSYLKAPYDDVTTNRYGSTQTVLNQSIHRSPSGATSHDSEVHFSSTKSS
LDKIGVLPDGKIRQSEPKLKKSLSEDKVSKMNLKAQGRGLVFMSPHGEKYEKSKDEQKEKLNMW
VNNLYVFFVSVLFSAYKHEEALKEKVEENRLQEAVLAQQKQIENEELEARLNILREEEARRQDF
ELDITVLKEPPEVPAVQPLTPSPPKEDLVSMQTSKASPGKKKKK

hide sequence

RefSeq Acc Id:

XP_006248920 ⟸ XM_006248858

- Peptide Label:

isoform X1

- Sequence:

show sequence

MVKEKKKADKKGDKSARSPSSISDNPEAAKQEISASKQEVAPSAVIPVLETPLKQTPKRDSEHT
YQSEDETQYEEPILTKLIVESYEGEKVRGLYEGEGFAVFQGGNTYHDRSLWMRGRLRVGTTLLL
LLLLPSASTSLQGMFSEGLMHGQGTYIWADGLKYEGDFVKNIPMNHGVYTWPDGSTYEGEVVNG
MRNGFGMFKCGTQPVSYIGHWCHGKRHGKGSIYYNQEGTSWYEGDWVYNIKKGWGIRCYKSGNI
YEGQWENNMRHGEGRMRWLTTNEEYTGHWEKGIQNGFGTHTWFLKRIPNSQYPLRNEYIGAFVN
GFRHGQGKFYYASGAMYEGEWVSNKKQGRGRITFKNGRVYEGLFSNDHIAQFFEAEMDYSYSLD
RRSDISQRSRQARGSSVSADREPETLRKLDGSESRSVLGSSIELDLNLLLDMYPEESQEEEKKQ
VEYAVLRNITELRRIYCFYSGLGCDHSLDNTFLMTKLHFWRFLKDCRFHHHNITLADMDRVLSV
YNGIPIEEIHSPFRTILLRTFLNYLLQLAYYIHHKEFQNRSPSLFLCFTKLMAENIHPHACQVK
GHLFNEQQRTLYSMNYIDKCWEIYTAYCRPNEAPPYELTMKMRYFLWMLKDFRMINKELTATKF
MRVIAEDNPFVYDGMDSNFELELVFLEFFEALLCFSLCCMFDQMTRSYLKAPYDDVTTNRYGST
QTVLNQSIHRSPSGATSHDSEVHFSSTKSSLDKIGVLPDGKIRQSEPKLKKSLSEDKVSKMNLK
AQGRGLVFMSPHGEKYEKSKDEQKEKLNMWVNNLYVFFVSVLFSAYKHEEALKEKVEENRLQEA
VLAQQKQIENEELEARLNILREEEARRQDFELDITVLKEPPEVPAVQPLTPSPPKEDLVSMQTS
KASPGKKKKK

hide sequence

Ensembl Acc Id:

ENSRNOP00000037688 ⟸ ENSRNOT00000034483

RefSeq Acc Id:	XP_038945104 ⟸ XM_039089176
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063127207 ⟸ XM_063271137
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063127206 ⟸ XM_063271136
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063127208 ⟸ XM_063271138
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063127205 ⟸ XM_063271135
- Peptide Label:	isoform X3
- UniProtKB:	Q66HB5 (UniProtKB/Swiss-Prot)

Ensembl Acc Id:

ENSRNOP00000102642 ⟸ ENSRNOT00000159819

RefSeq Acc Id:

NP_001420366 ⟸ NM_001433437

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q66HB5-F1-model_v2	AlphaFold	Q66HB5	1-876	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13698431

Promoter ID:

EPDNEW_R8956

Type:

initiation region

Name:

Rsph10b_1

Description:

radial spoke head 10 homolog B

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	12	12,712,768 - 12,712,828	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1311893	AgrOrtholog
BioCyc Gene	G2FUF-20026	BioCyc
Ensembl Genes	ENSRNOG00000001036	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000034483	ENTREZGENE
	ENSRNOT00000034483.7	UniProtKB/Swiss-Prot
	ENSRNOT00000159819	ENTREZGENE
Gene3D-CATH	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7114952	IMAGE-MGC_LOAD
InterPro	MORN	UniProtKB/Swiss-Prot
KEGG Report	rno:288478	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:93978	IMAGE-MGC_LOAD
NCBI Gene	288478	ENTREZGENE
PANTHER	RADIAL SPOKE HEAD 10 HOMOLOG B-RELATED	UniProtKB/Swiss-Prot
	RADIAL SPOKE HEAD 10 HOMOLOG B-RELATED	UniProtKB/Swiss-Prot
Pfam	MORN	UniProtKB/Swiss-Prot
PhenoGen	Rsph10b	PhenoGen
RatGTEx	ENSRNOG00000001036	RatGTEx
SMART	MORN	UniProtKB/Swiss-Prot
Superfamily-SCOP	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	UniProtKB/Swiss-Prot
UniProt	A0A8I6AUR1_RAT	UniProtKB/TrEMBL
	A0ABK0LL45_RAT	UniProtKB/TrEMBL
	Q66HB5	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-04-13	Rsph10b	radial spoke head 10 homolog B	Rsph10b	radial spoke head 10 homolog B (Chlamydomonas)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2010-04-23	Rsph10b	radial spoke head 10 homolog B (Chlamydomonas)	RGD1311893	hypothetical LOC288478	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	RGD1311893	hypothetical LOC288478	RGD1311893_predicted	hypothetical LOC288478 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1311893_predicted	hypothetical LOC288478 (predicted)	LOC288478_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC288478_predicted	hypothetical LOC288478 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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