Paqr8 (progestin and adipoQ receptor family member 8)

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Gene: Paqr8 (progestin and adipoQ receptor family member 8) Rattus norvegicus

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Symbol:

Paqr8

Name:

progestin and adipoQ receptor family member 8

RGD ID:

1311710

Description:

Predicted to enable nuclear steroid receptor activity and steroid binding activity. Predicted to be involved in response to steroid hormone. Predicted to be located in Golgi apparatus. Predicted to be active in plasma membrane. Orthologous to human PAQR8 (progestin and adipoQ receptor family member 8); INTERACTS WITH 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol; 17beta-estradiol.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC316275; membrane progestin receptor beta; Pmrbeta; progestin and adipoQ receptor family member VIII; progestin membrane receptor beta; RGD1311710; similar to putative membrane steroid receptor

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	30,808,921 - 30,858,599 (+)	NCBI		GRCr8
mRatBN7.2	9	23,312,521 - 23,362,175 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	23,312,585 - 23,362,340 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	31,831,087 - 31,848,080 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	36,951,795 - 36,968,791 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	35,267,072 - 35,284,066 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	27,005,270 - 27,054,591 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	27,034,022 - 27,051,002 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	25,861,614 - 25,910,763 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	19,661,028 - 19,678,009 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	19,658,349 - 19,675,330 (+)	NCBI
Celera	9	20,916,570 - 20,933,551 (+)	NCBI		Celera
Cytogenetic Map	9	q13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1-naphthyl isothiocyanate (EXP)

17alpha-ethynylestradiol (EXP)

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3,3',4,4',5-pentachlorobiphenyl (EXP)

4,4'-sulfonyldiphenol (ISO)

5-fluorouracil (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

acrylamide (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

carbon nanotube (ISO)

chloroprene (ISO)

chromium(6+) (ISO)

clothianidin (ISO)

copper(II) chloride (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

Dibutyl phosphate (ISO)

diclofenac (EXP)

diquat (ISO)

dorsomorphin (ISO)

endosulfan (EXP)

ethanol (ISO)

fluoxetine (EXP)

fulvestrant (ISO)

gemcitabine (ISO)

gentamycin (EXP)

glyphosate (ISO)

lipopolysaccharide (ISO)

methyl methanesulfonate (ISO)

nickel atom (ISO)

paracetamol (EXP)

phenylmercury acetate (ISO)

protein kinase inhibitor (ISO)

quercetin (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

temozolomide (ISO)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

tris(2-butoxyethyl) phosphate (ISO)

urethane (ISO)

valproic acid (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

response to steroid hormone (IBA)

steroid hormone receptor signaling pathway (IEA)

Cellular Component

Golgi apparatus (IEA,ISO)

plasma membrane (IBA,ISO)

Molecular Function

metal ion binding (IEA)

nuclear steroid receptor activity (IBA)

protein binding (ISO)

steroid binding (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
4.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:16123161	PMID:16778019	PMID:20977928	PMID:37699860

Genomics

Comparative Map Data

Paqr8
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	30,808,921 - 30,858,599 (+)	NCBI		GRCr8
mRatBN7.2	9	23,312,521 - 23,362,175 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	23,312,585 - 23,362,340 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	31,831,087 - 31,848,080 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	36,951,795 - 36,968,791 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	35,267,072 - 35,284,066 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	27,005,270 - 27,054,591 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	27,034,022 - 27,051,002 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	25,861,614 - 25,910,763 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	19,661,028 - 19,678,009 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	19,658,349 - 19,675,330 (+)	NCBI
Celera	9	20,916,570 - 20,933,551 (+)	NCBI		Celera
Cytogenetic Map	9	q13	NCBI

PAQR8
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	52,362,151 - 52,407,777 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	52,361,421 - 52,407,777 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	52,226,949 - 52,272,575 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	52,334,904 - 52,380,452 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	52,334,903 - 52,380,433	NCBI
Celera	6	53,888,043 - 53,933,700 (+)	NCBI		Celera
Cytogenetic Map	6	p12.2	NCBI
HuRef	6	52,058,115 - 52,103,855 (+)	NCBI		HuRef
CHM1_1	6	52,229,162 - 52,274,798 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	52,200,912 - 52,246,549 (+)	NCBI		T2T-CHM13v2.0

Paqr8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	20,960,772 - 21,009,874 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	20,960,830 - 21,009,874 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	20,890,548 - 20,939,650 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	20,890,606 - 20,939,650 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	20,880,703 - 20,928,837 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	20,875,773 - 20,923,907 (+)	NCBI		MGSCv36	mm8
Celera	1	20,766,586 - 20,813,797 (+)	NCBI		Celera
Cytogenetic Map	1	A4	NCBI
cM Map	1	6.5	NCBI

Paqr8
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955411	5,691,228 - 5,743,438 (-)	NCBI	ChiLan1.0	ChiLan1.0

PAQR8
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	66,829,976 - 66,875,224 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	62,706,896 - 62,752,151 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	51,914,374 - 51,959,594 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	53,222,169 - 53,227,108 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	53,222,557 - 53,223,621 (+)	Ensembl	panpan1.1		panPan2

PAQR8
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	19,968,950 - 20,059,344 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	20,020,016 - 20,056,008 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	19,865,363 - 19,960,298 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	20,467,706 - 20,562,412 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	20,444,185 - 20,555,641 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	19,972,986 - 20,068,238 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	20,077,327 - 20,171,949 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	20,214,616 - 20,310,431 (+)	NCBI		UU_Cfam_GSD_1.0

Paqr8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	55,504,214 - 55,544,176 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936476	8,416,363 - 8,456,740 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936476	8,414,768 - 8,456,740 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PAQR8
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	46,104,677 - 46,234,449 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	46,228,478 - 46,231,105 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	52,679,481 - 52,682,108 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PAQR8
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	20,096,407 - 20,142,477 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	20,099,906 - 20,100,970 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666044	52,265,974 - 52,311,895 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Paqr8
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624855	3,693,541 - 3,735,970 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624855	3,693,582 - 3,735,854 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Paqr8
279 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	105
Count of miRNA genes:	97
Interacting mature miRNAs:	102
Transcripts:	ENSRNOT00000029696
Prediction methods:	Microtar, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631211	Bw4	Body weight QTL4	5.31		retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	9	5109826	50109826	Rat
2303559	Gluco54	Glucose level QTL 54	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	9	1254084	46254084	Rat
7411609	Foco16	Food consumption QTL 16	25.6	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	8952560	53952560	Rat
631680	Cm11	Cardiac mass QTL 11	3.1	0.00089	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	9	20430519	65430519	Rat
70186	Niddm26	Non-insulin dependent diabetes mellitus QTL 26	3.87		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	9	22071169	86369743	Rat
9589055	Scfw5	Subcutaneous fat weight QTL 5	5.55	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	9	1	37999212	Rat
1641911	Alcrsp13	Alcohol response QTL 13			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	1	43718459	Rat
1354650	Despr5	Despair related QTL 5	4.01	0.0017	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	9	1254084	46254084	Rat
1300124	Cm4	Cardiac mass QTL 4	3.55		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	9	1	40594091	Rat
61425	Cia15	Collagen induced arthritis QTL 15	4.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	9	5109826	42921101	Rat
631643	Bp120	Blood pressure QTL 120	3	0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	22071200	67071200	Rat
70226	Eae4	Experimental allergic encephalomyelitis QTL 4			nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	9	1	25661317	Rat
9589158	Gluco65	Glucose level QTL 65	6.82	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	9	1	37999212	Rat
10054125	Srcrt7	Stress Responsive Cort QTL 7	3.33	0.0011	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	9	1	87073594	Rat
724543	Cm20	Cardiac mass QTL 20	3.9		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	9	16961398	40594091	Rat
1600365	Mcs20	Mammary carcinoma susceptibility QTL 20	3		mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	9	13533770	42791750	Rat
11353947	Bp392	Blood pressure QTL 392			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	7283252	52283252	Rat
7411592	Foco8	Food consumption QTL 8	7.4	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	1	37999212	Rat
1331757	Cdexp1	CD45RC expression in CD8 T cells QTL 1	4.3		CD8-positive T cell quantity (VT:0008077)	blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)	9	1024537	67509080	Rat
1298088	Edpm11	Estrogen-dependent pituitary mass QTL 11	2.5		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	9	1	43718459	Rat
9589133	Insul26	Insulin level QTL 26	17.96	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	9	8952560	53952560	Rat
1598823	Memor16	Memory QTL 16	1.9		exploratory behavior trait (VT:0010471)	difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	9	22133322	49968732	Rat

Markers in Region

RH130372

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	23,348,618 - 23,348,798 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	27,041,037 - 27,041,216	NCBI	Rnor6.0
Rnor_5.0	9	25,897,209 - 25,897,388	UniSTS	Rnor5.0
RGSC_v3.4	9	19,668,043 - 19,668,222	UniSTS	RGSC3.4
Celera	9	20,923,585 - 20,923,764	UniSTS
RH 3.4 Map	9	238.0	UniSTS
Cytogenetic Map	9	q13	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001014099	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432946	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432947	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432951	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432952	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432953	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432955	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432956	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432957	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596433	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596434	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596435	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083545	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083546	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083547	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083548	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267116	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267117	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267118	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267119	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267120	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267122	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267123	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267124	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267125	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267126	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267127	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC079247	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC087722	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473987	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ088964	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ730978	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ220820	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000029696 ⟹ ENSRNOP00000038736

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	9	27,034,022 - 27,051,002 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000100549 ⟹ ENSRNOP00000076707

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	23,312,626 - 23,362,340 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000107525 ⟹ ENSRNOP00000086728

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	23,312,585 - 23,362,340 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000107820 ⟹ ENSRNOP00000094604

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	23,341,432 - 23,362,340 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000113837 ⟹ ENSRNOP00000080149

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	23,312,640 - 23,362,340 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000114681 ⟹ ENSRNOP00000084979

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	23,354,355 - 23,362,173 (+)	Ensembl

RefSeq Acc Id:

NM_001014099 ⟹ NP_001014121

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	30,838,030 - 30,855,011 (+)	NCBI
mRatBN7.2	9	23,341,606 - 23,358,587 (+)	NCBI
Rnor_6.0	9	27,034,022 - 27,051,003 (+)	NCBI
Rnor_5.0	9	25,861,614 - 25,910,763 (+)	NCBI
RGSC_v3.4	9	19,661,028 - 19,678,009 (+)	RGD
Celera	9	20,916,570 - 20,933,551 (+)	RGD

Sequence:

show sequence

CACCATGGGTGTTGCTGGGGCAGGATTCAGGTCTGTAGATATGAAATGAACAGCAGCAGCAGGT
TTTCTCTATAGCCATCCGACCCAGAACATGCTTTATCTTGTCAGAAAGGACAGGTTCGTTCGTT
TGTTGTTTGGTTTTGGTTTTTTTGAGACAAGGTTTCTTGGAGCAGCCCTGCTTGTCCTGGAACT
CACTCTATAGAGCAGGCTGGCCTCAAACTCACCACCGGCCTGGCTCAGAAAGAACAGGAGTTCC
TCAAGTCCTGATCAAAGCACTTGAAGTACCTTCTCTGCTTGTTTGCAGAGACCCTGTGGGTCAC
CGTGTGCCTCAGCTGGAGTGGACTGCACCTCTGTCATAATCCCACTACATATCTATCTATGGCA
CACTATAGCCACTAATTTCTACAAAGGTTGTCCTACTGAACCCCGAGGAGCCCGGGGACCACCG
CTACCATGACGACTGCCATCCTGGAGCGCCTGAGCACCCTGTCTGTGAGCGGGCAGCAGCTGCG
TCGTCTGCCCAAGATTCTGGAAGAAGGGCTTCCCAAGATGCCATGCACCGTCCCAGAAACCGAC
GTGCCCCAGCTCTTTCGGGAGCCGTACATCCACGCAGGCTACCGTCCCACGGGGCACGAGTGGC
GTTACTACTTCTTCAGCCTCTTTCAGAAGCACAACGAGGTGGTCAACGTCTGGACCCACTTGCT
CGCGGCCCTGGCGGTCCTTTTGCGATTCTGGGCCTTTGTGGAGGCAGGGGCATTGCAGTGGGCT
TCTCCCCACACCCTACCCCTGCTCCTCTTTATCCTGTCGTCAATCACTTACCTCACCTGCAGCC
TCTTGGCCCACCTGCTGCAGTCCAAGTCAGAGCTGTCCCACTACACCTTTTACTTTGTGGACTA
CGTCGGGGTCAGTGTCTACCAGTATGGCAGCGCCTTGGCTCACTTTTTCTATAGCTCCGACCAG
GCCTGGTACGAGCGGTTCTGGCTTTTCTTCCTGCCGGCGGCTGCTTTCTGTGGCTGGCTGTCCT
GTGCTGGCTGTTGCTATGCCAAGTATCGCTACCGACGGCCTTATCCAGTTATGCGGAAGATCTG
TCAAGTGGTACCAGCGGGGCTGGCCTTCATCCTAGACATCAGCCCCGTGGCGCACCGCGTGGCT
CTCTGCCACCTGGCCGGTTGCCAGGAGCAGGCGGCCTGGTACCACACCCTCCAGATCCTCTTCT
TCCTTGTCAGCGCGTACTTCTTCTCATGCCCTGTCCCCGAGAAGTACTTCCCCGGTTCCTGTGA
CATTGTGGGCCACGGACATCAAATCTTCCACGCCTTCCTTTCCATCTGCACGCTCTCCCAGCTG
GAGGCCATTCTTCTGGACTATCAGGGACGCCACGAGATCTTCTTCCAGCGCCACGGTCCCCTGT
CTGTCTACACGGCCTGTCTCTCCTTTTTCTTTTTAGCCGCATGCAGTGCGGCCACCGCCTCCCT
CCTGAGGCACAAGGTCAAGGACAGACTGATTAAGAAAGATTCCTGAGGTCGGCAGATGAGGAAC
GGTGTGGAGGTGGGCTACTGCGACTGGGAGAAAACTTGGCCCAATAATAGAAGTTGACTTTTTA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_017596433 ⟹ XP_017451922

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	30,808,922 - 30,858,599 (+)	NCBI
mRatBN7.2	9	23,312,525 - 23,362,175 (+)	NCBI
Rnor_6.0	9	27,005,270 - 27,054,591 (+)	NCBI

Sequence:

show sequence

TGGGCAGCCCTCCCCTGGGCCGGGAAAGGGCGGAGCTGGGCGTCGCCGTCCGGGTTGTCCCCTC
CTCCCGGCTGCTCTCGGGTGCAGAGCCCTCGGCGGTTGGGGCCGCTCGGAAGGAGCTCTCCCGG
AGCCGGGAGTCGGGAGTGCGGCTGGCGGAGCTGGGCTGCAGGAGCTCGGCCGCTCCTGGTATTG
GAGTTCCTCAAGTCCTGATCAAAGCACTTGAAGTACCTTCTCTGCTTGTTTGCAGAGACCCTGT
GGGTCACCGTGTGCCTCAGCTGGAGTGGACTGCACCTCTGTCATAATCCCACTACATATCTATC
TATGGCACACTATAGCCACTAATTTCTACAAAGGTTGTCCTACTGAACCCCGAGGAGCCCGGGG
ACCACCGCTACCATGACGACTGCCATCCTGGAGCGCCTGAGCACCCTGTCTGTGAGCGGGCAGC
AGCTGCGTCGTCTGCCCAAGATTCTGGAAGAAGGGCTTCCCAAGATGCCATGCACCGTCCCAGA
AACCGACGTGCCCCAGCTCTTTCGGGAGCCGTACATCCACGCAGGCTACCGTCCCACGGGGCAC
GAGTGGCGTTACTACTTCTTCAGCCTCTTTCAGAAGCACAACGAGGTGGTCAACGTCTGGACCC
ACTTGCTCGCGGCCCTGGCGGTCCTTTTGCGATTCTGGGCCTTTGTGGAGGCAGGGGCATTGCA
GTGGGCTTCTCCCCACACCCTACCCCTGCTCCTCTTTATCCTGTCGTCAATCACTTACCTCACC
TGCAGCCTCTTGGCCCACCTGCTGCAGTCCAAGTCAGAGCTGTCCCACTACACCTTTTACTTTG
TGGACTACGTCGGGGTCAGTGTCTACCAGTATGGCAGCGCCTTGGCTCACTTTTTCTATAGCTC
CGACCAGGCCTGGTACGAGCGGTTCTGGCTTTTCTTCCTGCCGGCGGCTGCTTTCTGTGGCTGG
CTGTCCTGTGCTGGCTGTTGCTATGCCAAGTATCGCTACCGACGGCCTTATCCAGTTATGCGGA
AGATCTGTCAAGTGGTACCAGCGGGGCTGGCCTTCATCCTAGACATCAGCCCCGTGGCGCACCG
CGTGGCTCTCTGCCACCTGGCCGGTTGCCAGGAGCAGGCGGCCTGGTACCACACCCTCCAGATC
CTCTTCTTCCTTGTCAGCGCGTACTTCTTCTCATGCCCTGTCCCCGAGAAGTACTTCCCCGGTT
CCTGTGACATTGTGGGCCACGGACATCAAATCTTCCACGCCTTCCTTTCCATCTGCACGCTCTC
CCAGCTGGAGGCCATTCTTCTGGACTATCAGGGACGCCACGAGATCTTCTTCCAGCGCCACGGT
CCCCTGTCTGTCTACACGGCCTGTCTCTCCTTTTTCTTTTTAGCCGCATGCAGTGCGGCCACCG
CCTCCCTCCTGAGGCACAAGGTCAAGGACAGACTGATTAAGAAAGATTCCTGAGGTCGGCAGAT
GAGGAACGGTGTGGAGGTGGGCTACTGCGACTGGGAGAAAACTTGGCCCAATAATAGAAGTTGA
CTTTTTATTCTTAAGGCTTGATTTTTTTAAATTAATATGTATTACAGGCTGAGGATGAAACTCA
ATTGGTAGAGAGTGCCATATAGCATGTAGGAAGCCCAGAGTTTGATCCCCAGTGCAGCAAAAGC
CAGAATAGTAGCACTCAAGGAGGCAGAGGCAGGAGGATCAGAAATTCTAGGTCGTCCTCCAACA
CGCAGTGAGTCCAAGGCTAGCCTCTGAAACGTGATCTTATCTCAAGAATAGAGATTGCTATGTA
TTTCAAAGGCATGGTATGGCTATGGAATTTCAAATGCAGGGCATTTGAGAGTTTTCAAAACGAA
TATTCATTCTTCTGTCTGGGTTGTAGCCTTGTTTGGGAAGAGATCTTGGCTAAGATTTATGAGA
TCCCAAACTAAAGAGAACCGTCCTCACCCATGGGCGATGAGCAGAATTCTGGTTGTGGCTTCAA
AGGCCAAGTCCTGAAACTGGACAGATAGTCAAATCGGACAGCCAAGTACACTGTGGCTGTTCCT
CACCCTAACGGGGCAGTCACCCTCCGCTGCTGGTCTTGGTATCTGTGTCAATTGAGCCAAGGAC
TCTGTCTTCTTGTCAGGATTTCAGCTTGTCTAGGGTGGAGGAAATCAGAATCTTCAAGAAGATT
CACGGGAACTCTTAGACAGAATGGACTTTCGATTTATACGATTTCTGGTCTCAACCACTGCAGC
TCTGGCTCTCAGGATAACCAGCTAGCTGGCCGATTTGCCTGAAGTACTACTGTTCTCACCCCGA
GGCTGCATGGTGATATAAAGAGTTCTGAAGCTATTACCCTTCCAGGAAAGGCTCGGAGCCGGCC
ATACGAACATTCAGGAAGCCGATTCTTGTGTAACACAGAGACATAAACAAATTTAACAATGCCA
GGAGCTACCAGGACACACCCAGTCAGCAAACGTGGATATACTTGCCTGTTTGCTGCCCCTGGGG
CCCTTCTAGTTTCTATCTGTGGACTGCAGTATTAACTGCCAGCTTCTTTAGGGTTATCTGAAGG
TTTGAACTCTTTTAAAACCATGGCTCTAAAGTTCTTCGAGGGAGCTGATTATTTTAAGCGGGTC
CTAAGATCCAAGGCTCAAATTTCTGTTAGATGCTGTCCCGTGAAGGACCAACACAGCTACCCCA
ATTCAGGCTCCTCAAAACAGGCAGTCCCACTTCAGATTTGAGAAAAAAACCTTAAAACGGGTCC
TAGGACGGGTAAATGTGTGCTTACTGCCGTGGGCCCTCCCTGAAGGTCCGTTGAGTAAGAACGA
GGTACCTGATTGCCAAATGCGCTGTTTATGACATTGCTGCCAGCAGCCGCCGGGAGGGGAGTGG
CGCTCGCAGCTGCTATGTTCTGGCCACGCAGCTCTCTCCGAGGACGAGGACTGTCTTCTGCATG
AATCCAGTGAAGGAGGCTGTGGTCGAGGAAGGGCTGAGATGCCCTCTCCTCATAGGCTGCATTT
CCTATCAGTATGAGGTCCCAGTGTACTAAAATGGGATGCTTTAAACTTCAATCCCAGTTTAATG
TTCCTCCTCCACTACTAGGTCACTTGCTGGTCTTAAAACCTTTGTTTTCTACCTTTTTTTGTTT
TTGTTTTTTGTGAGCGATTTGTGAATTTTGTGCCTTATACATGGGGGTGTCTAAACTCTTTATT
GAAACATGTGCACACACGGAATATCCTGTTTTGCATTCTTGGGAACCCCAGAAAGCTAGAATGA
CTTGTCAATCTATTAATCTGTATTTGGGGGAGGGGTCAACAGAAGTATCCCTACTGCCTTTAAA
CCAAGAAAGCATGTGTCTCCTGCCTTGTTTTATTAGTTGGGTTTCTTGTTCATTCACGGTCAAG
ATGAACATCGAGGCTAGCCAGGTGACCCAAGGTTCTGGTTGTCTAGGTCAAGTTCATGCCAAGG
AATGTTAGCAAAACTGAACGGGTCTGAACTGAGCGAAGGCTGGTTGGGGTATGTGTAAATGCTA
CAAATAGAGGGTCTATTTAAAACGGGAACCAGAAAGTGTTAGAAATTCCATTGTTATGGATTCA
AAGACTGTATTCTTTTAAACGTTGGTGGGAAATGTGAGAGAGGGAAGGGAGGAGGAAGGTGTTC
TTGTGATTATCTGCGAACAAAGATTTTATTCTTCTTTTGGTTCTTTTCTTTTACTATCTCACTA
TCACCCAGGCTGGCCTGGAAATCCTTATGTAGACCGGGCTGCCCTTGAACTTTAAAGGTCAACC
TGTCTCTGCCTCCCAAGCGGCAGGGTTGAAGGTGTGCACTAACCACTCTCAGCTCTGGGGACAG
AGATCTGTGTTTTTCAGTGGTCCTGCAGCTCAGCGTCAACCTGAACTGTCACAGGTCTGTGACA
CCATCCGAGTAAAACGTGAGATACTGGCATCCAATTCTCAGTTTAATTATACAAATATTGCTAA
CTATAAATTTGGGAATTGAAAAGAAAGAAAAAAGTGATTTCTATGGAGTTGGGACTTGAAACCC
AAGACCTACATACGACATGTTAACCAAGAGTTCCCCATTGACCTATATATACCCTAGCCCAAGG
AACAGTGGATGAATAATAGATATTTGGGGGGCATCGAGGAGGGGGACTGTAATCTTCCCTGAAA
ATACCAGTATCTAATGGGAATACTATAAATGCACTTACAAGTGCATACACAGAATGGGCGATTT
TTAACTCTTCGGTGTCATCAAAATGAGCCTATCAGTATGGTAAAGACTAGGCTAGTTTGAATAT
AACAACTAAGAATTTTAAAAAGGACTATGCATGCCTCTTGATTTTACAGTGGGATTTGCCACCC
TGCAAAATCAGCATAATTTAAAAAAGATATAGTTATCTTGCTCTCCAAAACTAGAAATTTTGGC
TGTTGCCTCTCTTAAGACCTTCAACCAAACCCAATAATATGTAAATGTCTCTGATAAAACTAAG
CTACCTGTCACTAATACTTTCTCATGAATAAAATTCTTATGGGTTGATAGAAAGCCCTACTTAG
TTCAAGAAGAGGGGCCCACAGGATGCATTTGGGGGTGCCTTGTTTCTCATTTCAGAATCCTGAC
TTTTGTTTGCCAGGGAAAGTTGTTTTCGTTGTTTCTGGTTTGAGGTGTTTGTTTTGTTTGAGAT
GGACCTGTGTATCCCAGGCTGGCCTGGAACTCCGGATTGAGTCTCTCGTCACAGTCCGCCAAGG
AGTCGGTTGGGATTGATTACAGGCTGCACCAACACCACATCCAATTCTAATAAAACTAATTTCC
AAGTTCTTAAAGATGTCAGGGTTACAATTTCAGCCCTTAAGTCTCTCCATAACATAGTGCAAGC
CATGGACTGGAAGCTTGAAACAGAGTTCAGAGCCCTGATAGGAGGGCAGTGTGGCCCTCTGTCG
CCCTCCATTATTGTTTGGTCACTGCTCTGTAGTTCCACCTGGATCCTCCAGAGGGCGATGTTGT
CTTACTCAGTGCTCTCTCAGCGCCTGTTGCCAGGGCTTCGCCACTAGAACTATGTTTTGCTTGG
TTAAAGTGTGGAATTCTTTTCTGTCTCTATAAACCTACTTACGTGAGTAATCATTAAACAGATT
TTGTACGTGAA

hide sequence

RefSeq Acc Id:

XM_017596434 ⟹ XP_017451923

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	30,809,002 - 30,858,599 (+)	NCBI
mRatBN7.2	9	23,312,525 - 23,362,175 (+)	NCBI
Rnor_6.0	9	27,005,270 - 27,054,591 (+)	NCBI

Sequence:

show sequence

TGGGCAGCCCTCCCCTGGGCCGGGAAAGGGCGGAGCTGGGCGTCGCCGTCCGGGTTGTCCCCTC
CTCCCGGCTGCTCTCGGGTGCAGAGCCCTCGGCGGTTGGGGCCGCTCGGAAGGAGCTCTCCCGG
AGCCGGGAGTCGGGAGTGCGGCTGGCGGAGCTGGGCTGCAGGAGCTCGGCCGCTCCTGGTATTG
AATGCAGAACAGACAGTCCAGACGGTGGAGTTGAGGAGCTGCAGAGCCCTGAAGGATTGGAGCT
AGGGGATCCGGACTGCGATGGAGTTCCTCAAGTCCTGATCAAAGCACTTGAAGTACCTTCTCTG
CTTGTTTGCAGAGACCCTGTGGGTCACCGTGTGCCTCAGCTGGAGTGGACTGCACCTCTGTCAT
AATCCCACTACATATCTATCTATGGCACACTATAGCCACTAATTTCTACAAAGGTTGTCCTACT
GAACCCCGAGGAGCCCGGGGACCACCGCTACCATGACGACTGCCATCCTGGAGCGCCTGAGCAC
CCTGTCTGTGAGCGGGCAGCAGCTGCGTCGTCTGCCCAAGATTCTGGAAGAAGGGCTTCCCAAG
ATGCCATGCACCGTCCCAGAAACCGACGTGCCCCAGCTCTTTCGGGAGCCGTACATCCACGCAG
GCTACCGTCCCACGGGGCACGAGTGGCGTTACTACTTCTTCAGCCTCTTTCAGAAGCACAACGA
GGTGGTCAACGTCTGGACCCACTTGCTCGCGGCCCTGGCGGTCCTTTTGCGATTCTGGGCCTTT
GTGGAGGCAGGGGCATTGCAGTGGGCTTCTCCCCACACCCTACCCCTGCTCCTCTTTATCCTGT
CGTCAATCACTTACCTCACCTGCAGCCTCTTGGCCCACCTGCTGCAGTCCAAGTCAGAGCTGTC
CCACTACACCTTTTACTTTGTGGACTACGTCGGGGTCAGTGTCTACCAGTATGGCAGCGCCTTG
GCTCACTTTTTCTATAGCTCCGACCAGGCCTGGTACGAGCGGTTCTGGCTTTTCTTCCTGCCGG
CGGCTGCTTTCTGTGGCTGGCTGTCCTGTGCTGGCTGTTGCTATGCCAAGTATCGCTACCGACG
GCCTTATCCAGTTATGCGGAAGATCTGTCAAGTGGTACCAGCGGGGCTGGCCTTCATCCTAGAC
ATCAGCCCCGTGGCGCACCGCGTGGCTCTCTGCCACCTGGCCGGTTGCCAGGAGCAGGCGGCCT
GGTACCACACCCTCCAGATCCTCTTCTTCCTTGTCAGCGCGTACTTCTTCTCATGCCCTGTCCC
CGAGAAGTACTTCCCCGGTTCCTGTGACATTGTGGGCCACGGACATCAAATCTTCCACGCCTTC
CTTTCCATCTGCACGCTCTCCCAGCTGGAGGCCATTCTTCTGGACTATCAGGGACGCCACGAGA
TCTTCTTCCAGCGCCACGGTCCCCTGTCTGTCTACACGGCCTGTCTCTCCTTTTTCTTTTTAGC
CGCATGCAGTGCGGCCACCGCCTCCCTCCTGAGGCACAAGGTCAAGGACAGACTGATTAAGAAA
GATTCCTGAGGTCGGCAGATGAGGAACGGTGTGGAGGTGGGCTACTGCGACTGGGAGAAAACTT
GGCCCAATAATAGAAGTTGACTTTTTATTCTTAAGGCTTGATTTTTTTAAATTAATATGTATTA
CAGGCTGAGGATGAAACTCAATTGGTAGAGAGTGCCATATAGCATGTAGGAAGCCCAGAGTTTG
ATCCCCAGTGCAGCAAAAGCCAGAATAGTAGCACTCAAGGAGGCAGAGGCAGGAGGATCAGAAA
TTCTAGGTCGTCCTCCAACACGCAGTGAGTCCAAGGCTAGCCTCTGAAACGTGATCTTATCTCA
AGAATAGAGATTGCTATGTATTTCAAAGGCATGGTATGGCTATGGAATTTCAAATGCAGGGCAT
TTGAGAGTTTTCAAAACGAATATTCATTCTTCTGTCTGGGTTGTAGCCTTGTTTGGGAAGAGAT
CTTGGCTAAGATTTATGAGATCCCAAACTAAAGAGAACCGTCCTCACCCATGGGCGATGAGCAG
AATTCTGGTTGTGGCTTCAAAGGCCAAGTCCTGAAACTGGACAGATAGTCAAATCGGACAGCCA
AGTACACTGTGGCTGTTCCTCACCCTAACGGGGCAGTCACCCTCCGCTGCTGGTCTTGGTATCT
GTGTCAATTGAGCCAAGGACTCTGTCTTCTTGTCAGGATTTCAGCTTGTCTAGGGTGGAGGAAA
TCAGAATCTTCAAGAAGATTCACGGGAACTCTTAGACAGAATGGACTTTCGATTTATACGATTT
CTGGTCTCAACCACTGCAGCTCTGGCTCTCAGGATAACCAGCTAGCTGGCCGATTTGCCTGAAG
TACTACTGTTCTCACCCCGAGGCTGCATGGTGATATAAAGAGTTCTGAAGCTATTACCCTTCCA
GGAAAGGCTCGGAGCCGGCCATACGAACATTCAGGAAGCCGATTCTTGTGTAACACAGAGACAT
AAACAAATTTAACAATGCCAGGAGCTACCAGGACACACCCAGTCAGCAAACGTGGATATACTTG
CCTGTTTGCTGCCCCTGGGGCCCTTCTAGTTTCTATCTGTGGACTGCAGTATTAACTGCCAGCT
TCTTTAGGGTTATCTGAAGGTTTGAACTCTTTTAAAACCATGGCTCTAAAGTTCTTCGAGGGAG
CTGATTATTTTAAGCGGGTCCTAAGATCCAAGGCTCAAATTTCTGTTAGATGCTGTCCCGTGAA
GGACCAACACAGCTACCCCAATTCAGGCTCCTCAAAACAGGCAGTCCCACTTCAGATTTGAGAA
AAAAACCTTAAAACGGGTCCTAGGACGGGTAAATGTGTGCTTACTGCCGTGGGCCCTCCCTGAA
GGTCCGTTGAGTAAGAACGAGGTACCTGATTGCCAAATGCGCTGTTTATGACATTGCTGCCAGC
AGCCGCCGGGAGGGGAGTGGCGCTCGCAGCTGCTATGTTCTGGCCACGCAGCTCTCTCCGAGGA
CGAGGACTGTCTTCTGCATGAATCCAGTGAAGGAGGCTGTGGTCGAGGAAGGGCTGAGATGCCC
TCTCCTCATAGGCTGCATTTCCTATCAGTATGAGGTCCCAGTGTACTAAAATGGGATGCTTTAA
ACTTCAATCCCAGTTTAATGTTCCTCCTCCACTACTAGGTCACTTGCTGGTCTTAAAACCTTTG
TTTTCTACCTTTTTTTGTTTTTGTTTTTTGTGAGCGATTTGTGAATTTTGTGCCTTATACATGG
GGGTGTCTAAACTCTTTATTGAAACATGTGCACACACGGAATATCCTGTTTTGCATTCTTGGGA
ACCCCAGAAAGCTAGAATGACTTGTCAATCTATTAATCTGTATTTGGGGGAGGGGTCAACAGAA
GTATCCCTACTGCCTTTAAACCAAGAAAGCATGTGTCTCCTGCCTTGTTTTATTAGTTGGGTTT
CTTGTTCATTCACGGTCAAGATGAACATCGAGGCTAGCCAGGTGACCCAAGGTTCTGGTTGTCT
AGGTCAAGTTCATGCCAAGGAATGTTAGCAAAACTGAACGGGTCTGAACTGAGCGAAGGCTGGT
TGGGGTATGTGTAAATGCTACAAATAGAGGGTCTATTTAAAACGGGAACCAGAAAGTGTTAGAA
ATTCCATTGTTATGGATTCAAAGACTGTATTCTTTTAAACGTTGGTGGGAAATGTGAGAGAGGG
AAGGGAGGAGGAAGGTGTTCTTGTGATTATCTGCGAACAAAGATTTTATTCTTCTTTTGGTTCT
TTTCTTTTACTATCTCACTATCACCCAGGCTGGCCTGGAAATCCTTATGTAGACCGGGCTGCCC
TTGAACTTTAAAGGTCAACCTGTCTCTGCCTCCCAAGCGGCAGGGTTGAAGGTGTGCACTAACC
ACTCTCAGCTCTGGGGACAGAGATCTGTGTTTTTCAGTGGTCCTGCAGCTCAGCGTCAACCTGA
ACTGTCACAGGTCTGTGACACCATCCGAGTAAAACGTGAGATACTGGCATCCAATTCTCAGTTT
AATTATACAAATATTGCTAACTATAAATTTGGGAATTGAAAAGAAAGAAAAAAGTGATTTCTAT
GGAGTTGGGACTTGAAACCCAAGACCTACATACGACATGTTAACCAAGAGTTCCCCATTGACCT
ATATATACCCTAGCCCAAGGAACAGTGGATGAATAATAGATATTTGGGGGGCATCGAGGAGGGG
GACTGTAATCTTCCCTGAAAATACCAGTATCTAATGGGAATACTATAAATGCACTTACAAGTGC
ATACACAGAATGGGCGATTTTTAACTCTTCGGTGTCATCAAAATGAGCCTATCAGTATGGTAAA
GACTAGGCTAGTTTGAATATAACAACTAAGAATTTTAAAAAGGACTATGCATGCCTCTTGATTT
TACAGTGGGATTTGCCACCCTGCAAAATCAGCATAATTTAAAAAAGATATAGTTATCTTGCTCT
CCAAAACTAGAAATTTTGGCTGTTGCCTCTCTTAAGACCTTCAACCAAACCCAATAATATGTAA
ATGTCTCTGATAAAACTAAGCTACCTGTCACTAATACTTTCTCATGAATAAAATTCTTATGGGT
TGATAGAAAGCCCTACTTAGTTCAAGAAGAGGGGCCCACAGGATGCATTTGGGGGTGCCTTGTT
TCTCATTTCAGAATCCTGACTTTTGTTTGCCAGGGAAAGTTGTTTTCGTTGTTTCTGGTTTGAG
GTGTTTGTTTTGTTTGAGATGGACCTGTGTATCCCAGGCTGGCCTGGAACTCCGGATTGAGTCT
CTCGTCACAGTCCGCCAAGGAGTCGGTTGGGATTGATTACAGGCTGCACCAACACCACATCCAA
TTCTAATAAAACTAATTTCCAAGTTCTTAAAGATGTCAGGGTTACAATTTCAGCCCTTAAGTCT
CTCCATAACATAGTGCAAGCCATGGACTGGAAGCTTGAAACAGAGTTCAGAGCCCTGATAGGAG
GGCAGTGTGGCCCTCTGTCGCCCTCCATTATTGTTTGGTCACTGCTCTGTAGTTCCACCTGGAT
CCTCCAGAGGGCGATGTTGTCTTACTCAGTGCTCTCTCAGCGCCTGTTGCCAGGGCTTCGCCAC
TAGAACTATGTTTTGCTTGGTTAAAGTGTGGAATTCTTTTCTGTCTCTATAAACCTACTTACGT
GAGTAATCATTAAACAGATTTTGTACGTGAA

hide sequence

RefSeq Acc Id:

XM_017596435 ⟹ XP_017451924

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	30,809,559 - 30,858,599 (+)	NCBI
mRatBN7.2	9	23,313,125 - 23,362,175 (+)	NCBI
Rnor_6.0	9	27,006,000 - 27,054,591 (+)	NCBI

Sequence:

show sequence

GCTCCTCCTTGAGGAAGACGGAGCGGGATTCTTCAAGGAGACACCGCAGAGAGTTGTGCTGAAA
GCTGAGTTCCTCAAGTCCTGATCAAAGCACTTGAAGTACCTTCTCTGCTTGTTTGCAGAGACCC
TGTGGGTCACCGTGTGCCTCAGCTGGAGTGGACTGCACCTCTGTCATAATCCCACTACATATCT
ATCTATGGCACACTATAGCCACTAATTTCTACAAAGGTTGTCCTACTGAACCCCGAGGAGCCCG
GGGACCACCGCTACCATGACGACTGCCATCCTGGAGCGCCTGAGCACCCTGTCTGTGAGCGGGC
AGCAGCTGCGTCGTCTGCCCAAGATTCTGGAAGAAGGGCTTCCCAAGATGCCATGCACCGTCCC
AGAAACCGACGTGCCCCAGCTCTTTCGGGAGCCGTACATCCACGCAGGCTACCGTCCCACGGGG
CACGAGTGGCGTTACTACTTCTTCAGCCTCTTTCAGAAGCACAACGAGGTGGTCAACGTCTGGA
CCCACTTGCTCGCGGCCCTGGCGGTCCTTTTGCGATTCTGGGCCTTTGTGGAGGCAGGGGCATT
GCAGTGGGCTTCTCCCCACACCCTACCCCTGCTCCTCTTTATCCTGTCGTCAATCACTTACCTC
ACCTGCAGCCTCTTGGCCCACCTGCTGCAGTCCAAGTCAGAGCTGTCCCACTACACCTTTTACT
TTGTGGACTACGTCGGGGTCAGTGTCTACCAGTATGGCAGCGCCTTGGCTCACTTTTTCTATAG
CTCCGACCAGGCCTGGTACGAGCGGTTCTGGCTTTTCTTCCTGCCGGCGGCTGCTTTCTGTGGC
TGGCTGTCCTGTGCTGGCTGTTGCTATGCCAAGTATCGCTACCGACGGCCTTATCCAGTTATGC
GGAAGATCTGTCAAGTGGTACCAGCGGGGCTGGCCTTCATCCTAGACATCAGCCCCGTGGCGCA
CCGCGTGGCTCTCTGCCACCTGGCCGGTTGCCAGGAGCAGGCGGCCTGGTACCACACCCTCCAG
ATCCTCTTCTTCCTTGTCAGCGCGTACTTCTTCTCATGCCCTGTCCCCGAGAAGTACTTCCCCG
GTTCCTGTGACATTGTGGGCCACGGACATCAAATCTTCCACGCCTTCCTTTCCATCTGCACGCT
CTCCCAGCTGGAGGCCATTCTTCTGGACTATCAGGGACGCCACGAGATCTTCTTCCAGCGCCAC
GGTCCCCTGTCTGTCTACACGGCCTGTCTCTCCTTTTTCTTTTTAGCCGCATGCAGTGCGGCCA
CCGCCTCCCTCCTGAGGCACAAGGTCAAGGACAGACTGATTAAGAAAGATTCCTGAGGTCGGCA
GATGAGGAACGGTGTGGAGGTGGGCTACTGCGACTGGGAGAAAACTTGGCCCAATAATAGAAGT
TGACTTTTTATTCTTAAGGCTTGATTTTTTTAAATTAATATGTATTACAGGCTGAGGATGAAAC
TCAATTGGTAGAGAGTGCCATATAGCATGTAGGAAGCCCAGAGTTTGATCCCCAGTGCAGCAAA
AGCCAGAATAGTAGCACTCAAGGAGGCAGAGGCAGGAGGATCAGAAATTCTAGGTCGTCCTCCA
ACACGCAGTGAGTCCAAGGCTAGCCTCTGAAACGTGATCTTATCTCAAGAATAGAGATTGCTAT
GTATTTCAAAGGCATGGTATGGCTATGGAATTTCAAATGCAGGGCATTTGAGAGTTTTCAAAAC
GAATATTCATTCTTCTGTCTGGGTTGTAGCCTTGTTTGGGAAGAGATCTTGGCTAAGATTTATG
AGATCCCAAACTAAAGAGAACCGTCCTCACCCATGGGCGATGAGCAGAATTCTGGTTGTGGCTT
CAAAGGCCAAGTCCTGAAACTGGACAGATAGTCAAATCGGACAGCCAAGTACACTGTGGCTGTT
CCTCACCCTAACGGGGCAGTCACCCTCCGCTGCTGGTCTTGGTATCTGTGTCAATTGAGCCAAG
GACTCTGTCTTCTTGTCAGGATTTCAGCTTGTCTAGGGTGGAGGAAATCAGAATCTTCAAGAAG
ATTCACGGGAACTCTTAGACAGAATGGACTTTCGATTTATACGATTTCTGGTCTCAACCACTGC
AGCTCTGGCTCTCAGGATAACCAGCTAGCTGGCCGATTTGCCTGAAGTACTACTGTTCTCACCC
CGAGGCTGCATGGTGATATAAAGAGTTCTGAAGCTATTACCCTTCCAGGAAAGGCTCGGAGCCG
GCCATACGAACATTCAGGAAGCCGATTCTTGTGTAACACAGAGACATAAACAAATTTAACAATG
CCAGGAGCTACCAGGACACACCCAGTCAGCAAACGTGGATATACTTGCCTGTTTGCTGCCCCTG
GGGCCCTTCTAGTTTCTATCTGTGGACTGCAGTATTAACTGCCAGCTTCTTTAGGGTTATCTGA
AGGTTTGAACTCTTTTAAAACCATGGCTCTAAAGTTCTTCGAGGGAGCTGATTATTTTAAGCGG
GTCCTAAGATCCAAGGCTCAAATTTCTGTTAGATGCTGTCCCGTGAAGGACCAACACAGCTACC
CCAATTCAGGCTCCTCAAAACAGGCAGTCCCACTTCAGATTTGAGAAAAAAACCTTAAAACGGG
TCCTAGGACGGGTAAATGTGTGCTTACTGCCGTGGGCCCTCCCTGAAGGTCCGTTGAGTAAGAA
CGAGGTACCTGATTGCCAAATGCGCTGTTTATGACATTGCTGCCAGCAGCCGCCGGGAGGGGAG
TGGCGCTCGCAGCTGCTATGTTCTGGCCACGCAGCTCTCTCCGAGGACGAGGACTGTCTTCTGC
ATGAATCCAGTGAAGGAGGCTGTGGTCGAGGAAGGGCTGAGATGCCCTCTCCTCATAGGCTGCA
TTTCCTATCAGTATGAGGTCCCAGTGTACTAAAATGGGATGCTTTAAACTTCAATCCCAGTTTA
ATGTTCCTCCTCCACTACTAGGTCACTTGCTGGTCTTAAAACCTTTGTTTTCTACCTTTTTTTG
TTTTTGTTTTTTGTGAGCGATTTGTGAATTTTGTGCCTTATACATGGGGGTGTCTAAACTCTTT
ATTGAAACATGTGCACACACGGAATATCCTGTTTTGCATTCTTGGGAACCCCAGAAAGCTAGAA
TGACTTGTCAATCTATTAATCTGTATTTGGGGGAGGGGTCAACAGAAGTATCCCTACTGCCTTT
AAACCAAGAAAGCATGTGTCTCCTGCCTTGTTTTATTAGTTGGGTTTCTTGTTCATTCACGGTC
AAGATGAACATCGAGGCTAGCCAGGTGACCCAAGGTTCTGGTTGTCTAGGTCAAGTTCATGCCA
AGGAATGTTAGCAAAACTGAACGGGTCTGAACTGAGCGAAGGCTGGTTGGGGTATGTGTAAATG
CTACAAATAGAGGGTCTATTTAAAACGGGAACCAGAAAGTGTTAGAAATTCCATTGTTATGGAT
TCAAAGACTGTATTCTTTTAAACGTTGGTGGGAAATGTGAGAGAGGGAAGGGAGGAGGAAGGTG
TTCTTGTGATTATCTGCGAACAAAGATTTTATTCTTCTTTTGGTTCTTTTCTTTTACTATCTCA
CTATCACCCAGGCTGGCCTGGAAATCCTTATGTAGACCGGGCTGCCCTTGAACTTTAAAGGTCA
ACCTGTCTCTGCCTCCCAAGCGGCAGGGTTGAAGGTGTGCACTAACCACTCTCAGCTCTGGGGA
CAGAGATCTGTGTTTTTCAGTGGTCCTGCAGCTCAGCGTCAACCTGAACTGTCACAGGTCTGTG
ACACCATCCGAGTAAAACGTGAGATACTGGCATCCAATTCTCAGTTTAATTATACAAATATTGC
TAACTATAAATTTGGGAATTGAAAAGAAAGAAAAAAGTGATTTCTATGGAGTTGGGACTTGAAA
CCCAAGACCTACATACGACATGTTAACCAAGAGTTCCCCATTGACCTATATATACCCTAGCCCA
AGGAACAGTGGATGAATAATAGATATTTGGGGGGCATCGAGGAGGGGGACTGTAATCTTCCCTG
AAAATACCAGTATCTAATGGGAATACTATAAATGCACTTACAAGTGCATACACAGAATGGGCGA
TTTTTAACTCTTCGGTGTCATCAAAATGAGCCTATCAGTATGGTAAAGACTAGGCTAGTTTGAA
TATAACAACTAAGAATTTTAAAAAGGACTATGCATGCCTCTTGATTTTACAGTGGGATTTGCCA
CCCTGCAAAATCAGCATAATTTAAAAAAGATATAGTTATCTTGCTCTCCAAAACTAGAAATTTT
GGCTGTTGCCTCTCTTAAGACCTTCAACCAAACCCAATAATATGTAAATGTCTCTGATAAAACT
AAGCTACCTGTCACTAATACTTTCTCATGAATAAAATTCTTATGGGTTGATAGAAAGCCCTACT
TAGTTCAAGAAGAGGGGCCCACAGGATGCATTTGGGGGTGCCTTGTTTCTCATTTCAGAATCCT
GACTTTTGTTTGCCAGGGAAAGTTGTTTTCGTTGTTTCTGGTTTGAGGTGTTTGTTTTGTTTGA
GATGGACCTGTGTATCCCAGGCTGGCCTGGAACTCCGGATTGAGTCTCTCGTCACAGTCCGCCA
AGGAGTCGGTTGGGATTGATTACAGGCTGCACCAACACCACATCCAATTCTAATAAAACTAATT
TCCAAGTTCTTAAAGATGTCAGGGTTACAATTTCAGCCCTTAAGTCTCTCCATAACATAGTGCA
AGCCATGGACTGGAAGCTTGAAACAGAGTTCAGAGCCCTGATAGGAGGGCAGTGTGGCCCTCTG
TCGCCCTCCATTATTGTTTGGTCACTGCTCTGTAGTTCCACCTGGATCCTCCAGAGGGCGATGT
TGTCTTACTCAGTGCTCTCTCAGCGCCTGTTGCCAGGGCTTCGCCACTAGAACTATGTTTTGCT
TGGTTAAAGTGTGGAATTCTTTTCTGTCTCTATAAACCTACTTACGTGAGTAATCATTAAACAG
ATTTTGTACGTGAA

hide sequence

RefSeq Acc Id:

XM_039083545 ⟹ XP_038939473

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	30,809,002 - 30,858,599 (+)	NCBI
mRatBN7.2	9	23,312,525 - 23,362,175 (+)	NCBI

RefSeq Acc Id:

XM_039083546 ⟹ XP_038939474

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	30,828,094 - 30,858,599 (+)	NCBI
mRatBN7.2	9	23,338,885 - 23,362,175 (+)	NCBI

RefSeq Acc Id:

XM_039083547 ⟹ XP_038939475

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	30,809,734 - 30,858,599 (+)	NCBI
mRatBN7.2	9	23,313,784 - 23,362,175 (+)	NCBI

RefSeq Acc Id:

XM_039083548 ⟹ XP_038939476

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	30,808,952 - 30,858,599 (+)	NCBI
mRatBN7.2	9	23,312,521 - 23,362,175 (+)	NCBI

RefSeq Acc Id:

XM_063267116 ⟹ XP_063123186

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	30,808,921 - 30,858,599 (+)	NCBI

RefSeq Acc Id:

XM_063267117 ⟹ XP_063123187

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	30,809,002 - 30,858,599 (+)	NCBI

RefSeq Acc Id:

XM_063267118 ⟹ XP_063123188

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	30,809,002 - 30,858,599 (+)	NCBI

RefSeq Acc Id:

XM_063267119 ⟹ XP_063123189

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	30,827,802 - 30,858,599 (+)	NCBI

RefSeq Acc Id:

XM_063267120 ⟹ XP_063123190

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	30,809,002 - 30,858,599 (+)	NCBI

RefSeq Acc Id:

XM_063267122 ⟹ XP_063123192

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	30,828,091 - 30,858,599 (+)	NCBI

RefSeq Acc Id:

XM_063267123 ⟹ XP_063123193

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	30,808,997 - 30,858,599 (+)	NCBI

RefSeq Acc Id:

XM_063267124 ⟹ XP_063123194

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	30,808,997 - 30,858,599 (+)	NCBI

RefSeq Acc Id:

XM_063267125 ⟹ XP_063123195

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	30,809,555 - 30,858,599 (+)	NCBI

RefSeq Acc Id:

XM_063267126 ⟹ XP_063123196

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	30,828,091 - 30,858,599 (+)	NCBI

RefSeq Acc Id:

XM_063267127 ⟹ XP_063123197

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	30,809,766 - 30,858,599 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001014121	(Get FASTA)	NCBI Sequence Viewer
	NP_001419875	(Get FASTA)	NCBI Sequence Viewer
	NP_001419876	(Get FASTA)	NCBI Sequence Viewer
	NP_001419879	(Get FASTA)	NCBI Sequence Viewer
	NP_001419880	(Get FASTA)	NCBI Sequence Viewer
	NP_001419881	(Get FASTA)	NCBI Sequence Viewer
	NP_001419882	(Get FASTA)	NCBI Sequence Viewer
	NP_001419883	(Get FASTA)	NCBI Sequence Viewer
	NP_001419884	(Get FASTA)	NCBI Sequence Viewer
	NP_001419885	(Get FASTA)	NCBI Sequence Viewer
	NP_001419886	(Get FASTA)	NCBI Sequence Viewer
	XP_017451922	(Get FASTA)	NCBI Sequence Viewer
	XP_017451923	(Get FASTA)	NCBI Sequence Viewer
	XP_017451924	(Get FASTA)	NCBI Sequence Viewer
	XP_038939473	(Get FASTA)	NCBI Sequence Viewer
	XP_038939474	(Get FASTA)	NCBI Sequence Viewer
	XP_038939475	(Get FASTA)	NCBI Sequence Viewer
	XP_038939476	(Get FASTA)	NCBI Sequence Viewer
	XP_063123186	(Get FASTA)	NCBI Sequence Viewer
	XP_063123187	(Get FASTA)	NCBI Sequence Viewer
	XP_063123188	(Get FASTA)	NCBI Sequence Viewer
	XP_063123189	(Get FASTA)	NCBI Sequence Viewer
	XP_063123190	(Get FASTA)	NCBI Sequence Viewer
	XP_063123192	(Get FASTA)	NCBI Sequence Viewer
	XP_063123193	(Get FASTA)	NCBI Sequence Viewer
	XP_063123194	(Get FASTA)	NCBI Sequence Viewer
	XP_063123195	(Get FASTA)	NCBI Sequence Viewer
	XP_063123196	(Get FASTA)	NCBI Sequence Viewer
	XP_063123197	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH79247	(Get FASTA)	NCBI Sequence Viewer
	AAY89125	(Get FASTA)	NCBI Sequence Viewer
	EDM18645	(Get FASTA)	NCBI Sequence Viewer
	EDM18646	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000076707.1
	ENSRNOP00000080149.1
	ENSRNOP00000084979.1
	ENSRNOP00000086728.1
	ENSRNOP00000094604.1

RefSeq Acc Id:

NP_001014121 ⟸ NM_001014099

- UniProtKB:

Q6AY03 (UniProtKB/TrEMBL), A0A8I5XVB9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTTAILERLSTLSVSGQQLRRLPKILEEGLPKMPCTVPETDVPQLFREPYIHAGYRPTGHEWRY
YFFSLFQKHNEVVNVWTHLLAALAVLLRFWAFVEAGALQWASPHTLPLLLFILSSITYLTCSLL
AHLLQSKSELSHYTFYFVDYVGVSVYQYGSALAHFFYSSDQAWYERFWLFFLPAAAFCGWLSCA
GCCYAKYRYRRPYPVMRKICQVVPAGLAFILDISPVAHRVALCHLAGCQEQAAWYHTLQILFFL
VSAYFFSCPVPEKYFPGSCDIVGHGHQIFHAFLSICTLSQLEAILLDYQGRHEIFFQRHGPLSV
YTACLSFFFLAACSAATASLLRHKVKDRLIKKDS

hide sequence

RefSeq Acc Id:

XP_017451923 ⟸ XM_017596434

- Peptide Label:

isoform X1

- Sequence:

show sequence

MTTAILERLSTLSVSGQQLRRLPKILEEGLPKMPCTVPETDVPQLFREPYIHAGYRPTGHEWRY
YFFSLFQKHNEVVNVWTHLLAALAVLLRFWAFVEAGALQWASPHTLPLLLFILSSITYLTCSLL
AHLLQSKSELSHYTFYFVDYVGVSVYQYGSALAHFFYSSDQAWYERFWLFFLPAAAFCGWLSCA
GCCYAKYRYRRPYPVMRKICQVVPAGLAFILDISPVAHRVALCHLAGCQEQAAWYHTLQILFFL
VSAYFFSCPVPEKYFPGSCDIVGHGHQIFHAFLSICTLSQLEAILLDYQGRHEIFFQRHGPLSV
YTACLSFFFLAACSAATASLLRHKVKDRLIKKDS

hide sequence

RefSeq Acc Id:

XP_017451922 ⟸ XM_017596433

- Peptide Label:

isoform X1

- Sequence:

show sequence

MTTAILERLSTLSVSGQQLRRLPKILEEGLPKMPCTVPETDVPQLFREPYIHAGYRPTGHEWRY
YFFSLFQKHNEVVNVWTHLLAALAVLLRFWAFVEAGALQWASPHTLPLLLFILSSITYLTCSLL
AHLLQSKSELSHYTFYFVDYVGVSVYQYGSALAHFFYSSDQAWYERFWLFFLPAAAFCGWLSCA
GCCYAKYRYRRPYPVMRKICQVVPAGLAFILDISPVAHRVALCHLAGCQEQAAWYHTLQILFFL
VSAYFFSCPVPEKYFPGSCDIVGHGHQIFHAFLSICTLSQLEAILLDYQGRHEIFFQRHGPLSV
YTACLSFFFLAACSAATASLLRHKVKDRLIKKDS

hide sequence

RefSeq Acc Id:	XP_017451924 ⟸ XM_017596435
- Peptide Label:	isoform X1
- UniProtKB:	Q6AY03 (UniProtKB/TrEMBL), A0A8I5XVB9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTTAILERLSTLSVSGQQLRRLPKILEEGLPKMPCTVPETDVPQLFREPYIHAGYRPTGHEWRY YFFSLFQKHNEVVNVWTHLLAALAVLLRFWAFVEAGALQWASPHTLPLLLFILSSITYLTCSLL AHLLQSKSELSHYTFYFVDYVGVSVYQYGSALAHFFYSSDQAWYERFWLFFLPAAAFCGWLSCA GCCYAKYRYRRPYPVMRKICQVVPAGLAFILDISPVAHRVALCHLAGCQEQAAWYHTLQILFFL VSAYFFSCPVPEKYFPGSCDIVGHGHQIFHAFLSICTLSQLEAILLDYQGRHEIFFQRHGPLSV YTACLSFFFLAACSAATASLLRHKVKDRLIKKDS hide sequence

Ensembl Acc Id:

ENSRNOP00000038736 ⟸ ENSRNOT00000029696

RefSeq Acc Id:	XP_038939476 ⟸ XM_039083548
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038939473 ⟸ XM_039083545
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038939475 ⟸ XM_039083547
- Peptide Label:	isoform X1
- UniProtKB:	Q6AY03 (UniProtKB/TrEMBL), A0A8I5XVB9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038939474 ⟸ XM_039083546
- Peptide Label:	isoform X1

Ensembl Acc Id:

ENSRNOP00000080149 ⟸ ENSRNOT00000113837

Ensembl Acc Id:

ENSRNOP00000084979 ⟸ ENSRNOT00000114681

Ensembl Acc Id:

ENSRNOP00000086728 ⟸ ENSRNOT00000107525

Ensembl Acc Id:

ENSRNOP00000076707 ⟸ ENSRNOT00000100549

Ensembl Acc Id:

ENSRNOP00000094604 ⟸ ENSRNOT00000107820

RefSeq Acc Id:	XP_063123186 ⟸ XM_063267116
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063123193 ⟸ XM_063267123
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5XVB9 (UniProtKB/TrEMBL), Q6AY03 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123194 ⟸ XM_063267124
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5XVB9 (UniProtKB/TrEMBL), Q6AY03 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123188 ⟸ XM_063267118
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063123190 ⟸ XM_063267120
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5XVB9 (UniProtKB/TrEMBL), Q6AY03 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123187 ⟸ XM_063267117
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5XVB9 (UniProtKB/TrEMBL), Q6AY03 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123195 ⟸ XM_063267125
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5XVB9 (UniProtKB/TrEMBL), Q6AY03 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123197 ⟸ XM_063267127
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5XVB9 (UniProtKB/TrEMBL), Q6AY03 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123189 ⟸ XM_063267119
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5XVB9 (UniProtKB/TrEMBL), Q6AY03 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123192 ⟸ XM_063267122
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063123196 ⟸ XM_063267126
- Peptide Label:	isoform X1

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6AY03-F1-model_v2	AlphaFold	Q6AY03	1-354	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13696573

Promoter ID:

EPDNEW_R7098

Type:

initiation region

Name:

Paqr8_1

Description:

progestin and adipoQ receptor family member 8

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	9	27,034,008 - 27,034,068	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1311710	AgrOrtholog
BioCyc Gene	G2FUF-28026	BioCyc
Ensembl Genes	ENSRNOG00000012830	Ensembl
	ENSRNOG00000067120	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000100549.1	UniProtKB/TrEMBL
	ENSRNOT00000107525.1	UniProtKB/TrEMBL
	ENSRNOT00000107820.1	UniProtKB/TrEMBL
	ENSRNOT00000113837.1	UniProtKB/TrEMBL
	ENSRNOT00000114681.1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7132885	IMAGE-MGC_LOAD
InterPro	HlyIII_related	UniProtKB/TrEMBL
KEGG Report	rno:316275	UniProtKB/TrEMBL
MGC_CLONE	MGC:94336	IMAGE-MGC_LOAD
NCBI Gene	316275	ENTREZGENE
PANTHER	HlyIII_related	UniProtKB/TrEMBL
	MEMBRANE PROGESTIN RECEPTOR BETA	UniProtKB/TrEMBL
Pfam	HlyIII	UniProtKB/TrEMBL
PhenoGen	Paqr8	PhenoGen
RatGTEx	ENSRNOG00000012830	RatGTEx
	ENSRNOG00000067120	RatGTEx
UniProt	A0A8I5XVB9	ENTREZGENE, UniProtKB/TrEMBL
	Q6AY03	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-04-05	Paqr8	progestin and adipoQ receptor family member 8	Paqr8	progestin and adipoQ receptor family member VIII	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-02-27	Paqr8	progestin and adipoQ receptor family member VIII	RGD1311710	similar to putative membrane steroid receptor	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	RGD1311710	similar to putative membrane steroid receptor	RGD1311710_predicted	similar to putative membrane steroid receptor (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1311710_predicted	similar to putative membrane steroid receptor (predicted)	LOC316275_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC316275_predicted	similar to putative membrane steroid receptor (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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