PAQR8 (progestin and adipoQ receptor family member 8)

Gene: PAQR8 (progestin and adipoQ receptor family member 8) Sus scrofa

Analyze

Symbol:

PAQR8

Name:

progestin and adipoQ receptor family member 8

RGD ID:

13882026

Description:

ENCODES a protein that exhibits alpha-tubulin binding (inferred); calcium ion binding (inferred); metal ion binding (inferred); INVOLVED IN cell differentiation (inferred); cilium-dependent cell motility (inferred); mitotic cytokinesis (inferred); FOUND IN axoneme (inferred); cytoplasm (inferred); Golgi apparatus (inferred); INTERACTS WITH deoxynivalenol

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

membrane progestin receptor beta; mPR beta; progestin and adipoQ receptor family member VIII; putative membrane steroid receptor

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

NCBI Annotation Information:

Annotation category: partial on reference assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	46,104,677 - 46,234,449 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	46,228,478 - 46,231,105 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	52,679,481 - 52,682,108 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

deoxynivalenol (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell differentiation (IEA)

cilium-dependent cell motility (IEA)

mitotic cytokinesis (IEA)

mitotic spindle organization (IEA)

oogenesis (IEA)

response to steroid hormone (IBA,IEA)

steroid hormone mediated signaling pathway (IEA)

Cellular Component

axoneme (IEA)

cytoplasm (IEA)

Golgi apparatus (IEA)

membrane (IEA)

mitotic spindle (IEA)

plasma membrane (IBA,IEA)

Molecular Function

alpha-tubulin binding (IEA)

calcium ion binding (IEA)

metal ion binding (IEA)

nuclear steroid receptor activity (IBA,IEA)

protein binding (ISO)

steroid binding (IBA,IEA)

References

Additional References at PubMed

PMID:12601167	PMID:30032202

Genomics

Comparative Map Data

PAQR8
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	46,104,677 - 46,234,449 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	46,228,478 - 46,231,105 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	52,679,481 - 52,682,108 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PAQR8
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	52,362,151 - 52,407,777 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	52,361,421 - 52,407,777 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	52,226,949 - 52,272,575 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	52,334,904 - 52,380,452 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	52,334,903 - 52,380,433	NCBI
Celera	6	53,888,043 - 53,933,700 (+)	NCBI		Celera
Cytogenetic Map	6	p12.2	NCBI
HuRef	6	52,058,115 - 52,103,855 (+)	NCBI		HuRef
CHM1_1	6	52,229,162 - 52,274,798 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	52,200,912 - 52,246,549 (+)	NCBI		T2T-CHM13v2.0

Paqr8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	20,960,772 - 21,009,874 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	20,960,830 - 21,009,874 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	20,890,548 - 20,939,650 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	20,890,606 - 20,939,650 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	20,880,703 - 20,928,837 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	20,875,773 - 20,923,907 (+)	NCBI		MGSCv36	mm8
Celera	1	20,766,586 - 20,813,797 (+)	NCBI		Celera
Cytogenetic Map	1	A4	NCBI
cM Map	1	6.5	NCBI

Paqr8
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	30,808,921 - 30,858,599 (+)	NCBI		GRCr8
mRatBN7.2	9	23,312,521 - 23,362,175 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	23,312,585 - 23,362,340 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	31,831,087 - 31,848,080 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	36,951,795 - 36,968,791 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	35,267,072 - 35,284,066 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	27,005,270 - 27,054,591 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	27,034,022 - 27,051,002 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	25,861,614 - 25,910,763 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	19,661,028 - 19,678,009 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	19,658,349 - 19,675,330 (+)	NCBI
Celera	9	20,916,570 - 20,933,551 (+)	NCBI		Celera
Cytogenetic Map	9	q13	NCBI

Paqr8
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955411	5,691,228 - 5,743,438 (-)	NCBI	ChiLan1.0	ChiLan1.0

PAQR8
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	66,829,976 - 66,875,224 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	62,706,896 - 62,752,151 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	51,914,374 - 51,959,594 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	53,222,169 - 53,227,108 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	53,222,557 - 53,223,621 (+)	Ensembl	panpan1.1		panPan2

PAQR8
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	19,968,950 - 20,059,344 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	20,020,016 - 20,056,008 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	19,865,363 - 19,960,298 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	20,467,706 - 20,562,412 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	20,444,185 - 20,555,641 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	19,972,986 - 20,068,238 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	20,077,327 - 20,171,949 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	20,214,616 - 20,310,431 (+)	NCBI		UU_Cfam_GSD_1.0

Paqr8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	55,504,214 - 55,544,176 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936476	8,416,363 - 8,456,740 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936476	8,414,768 - 8,456,740 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PAQR8
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	20,096,407 - 20,142,477 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	20,099,906 - 20,100,970 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666044	52,265,974 - 52,311,895 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Paqr8
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624855	3,693,541 - 3,735,970 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624855	3,693,582 - 3,735,854 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in PAQR8
27 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium						12
Low	9	2	3	5		11	2	3	3
Below cutoff	1	2			2

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_213740	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000055	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF313615	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK391615	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CT737387	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU468948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01073050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000001956 ⟹ ENSSSCP00000001907

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	46,104,954 - 46,233,276 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000061228 ⟹ ENSSSCP00000053315

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	46,185,889 - 46,234,449 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000070539 ⟹ ENSSSCP00000070404

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	46,104,677 - 46,231,060 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000081499 ⟹ ENSSSCP00000071590

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	46,104,924 - 46,233,276 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000088813 ⟹ ENSSSCP00000068438

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	46,185,280 - 46,231,067 (+)	Ensembl

RefSeq Acc Id:

NM_213740 ⟹ NP_998905

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	7	46,228,478 - 46,231,105 (+)	NCBI

Sequence:

show sequence

GCCTCCTGCGGGAAGCCGGGATCCTGGGCTGGGAGTGCGGGCTGGCTCTGCGGGTTGTATCCCT
GTGCAGCCATGACAACCGCCATCCTGCAGCGCCTAAGCACCCTGTCGGTGAGCGGGCAGCATCT
GCGCCGCCTGCCCAAGATCCTGGAGGACGGGCTGCCCAAGATGCCTGGCACTGTGCCCGAGACC
GACGTGCCCCAGCTCTTCCGGGAGCCTTACATCCGCGCCGGGTACCGCCCCATCGGCCACGAGT
GGCGTTACTACTTCTTCAGCCTCTTTCAGAAACACAACGAGGTGGTCAACGTGTGGACCCACCT
GCTGGCGGCCCTGGCCGTCCTCCTGCGGTTCTGGGCCTTCGTGGAGACCGAGGGCCTGCCCTGG
ACCTCTGCTCACACCCTGCCCCTGCTCCTCTACGTCCTGTCCTCCATCACTTACCTCACCTTCA
GCCTGCTGGCCCACCTGCTGCAGTCCAAGTCCGAGCTCTCCCACTACACCTTCTACTTCGTGGA
CTACGTGGGCGTGAGCGTGTACCAGTACGGCAGCGCCCTGGTCCACTTCTTCTACGCCTCCGAC
CAGGCCTGGTACGAGCGCTTCTGGCTCTTCTTCCTGCCCGCGGCCGCCTTCTGCGGCTGGTTAT
CTTGCACCGGCTGCTGCTACGCCAAGTACCGTTACCGCCGGCCCTACCCGGTCATGAGGAAGGT
CTGCCAAGTGGTGCCCGCGGGGCTGGCCTTCATCCTGGACATCAGCCCCGTGGCGCACCGCGTG
GCCCTGTGCCACCTGTCTGGCTGCCAGGAGCAGGCCGCGTGGTACCACACCCTCCAGATCGTCT
TCTTTCTGGTCAGCGCCTACTTCTTCTCCTGCCCAGTTCCGGAGAAGTACTTTCCCGGTTCCTG
TGACATCGTGGGCCACGGCCATCAGATCTTCCACGCCTTTCTGTCCATCTGCACACTCTCTCAG
CTGGAGGCCATCCTCTTGGACTACAAGGGGCGACAGGAGATCTTCCTGCACCGTCACAGTCCCC
TGTCCATCTACGCCGCCTGCCTCTCCTTCTTCTTCCTGGTGGCCTGCAGCGGGGCCACTGCAGC
CCTCCTGCGGGAAAAAATCAAGGCCAGACTGAGCAAGAAGGATTCCTGAGGCCAGAGGGTGGGG
CGAGGTGTGGAGGCAAATAGGAGTTGACTTTTCGTTTTTAAAAGCAGGCTTTTAAATAGGTACA
TATTTCCAAGGATGGCTATGGCTCGCGAAGAGTTTTATTGTTATGGTTGTTAATGAAAGGAGCA
TTCCTTTTCCTTCGGGGCCATAGCCTTCCCAGACAGGAAGGGAAGGGACCTTGGCAAAGATTCA
GCAGACACTAAATTAAGAACCATCTACATGCCTGAAAATTCAGTGGACTTCTGACTGCAACCTC
CAGGAGCAAACCCCAGACCAAAGGGGTCATTCACTTGGACTGGAAAGTGAGGTGGCTGGACCAC
CCTTGAAATGGGCATTCAACTGTGATGCGGCTCTTGAGTGATTAGCTACATTGACTCAAGGACC
CGAATTCATTTGGATTTCAGATTTTCAGATTGGTGGAGAAGTCGGACTCTTCAGGAAGATTCAG
TGAAACCCATAGACGTAATGAATGACTCCATTCCCCTGACTTTTGTCCCCTTCTCTGACCCACT
CCAGCACTGACCCTTTTCTCAGGATGATGTCTGCTGGGCAGTTGTCTCCGCAGTGCTGTTCGCT
CCCACCTGTACCTTGTATGGTGATGTCAAGGACAGCGGAGCAGCCATCCTTCCAGGAATCACTC
GGATCCACACGAACCTTCAGGAAGTTTACTTCGCATCTGATACTAATGTACGTGGTACTGGAGA
CTGCAGTGCCAAGAGCCACCGGGGGGCCCCGCCAGCAAGCATGGATACCATTTGGAGCCATGGG
ACCCTTCCATTTTCTACCTGTGCATTGCAGGATTACTCGAGATCTCTCTTAGGGCTGCCTTACC
TGCTAGAAGATCCAGAGCTTTCTCCAGAGGATCTTCTCCAGATTTTGACCAGCATGTTCAAAAG
TGAATTGGTTCTAAGATTCCCACTAGGGATCTGCTGATTTTAAGAGGAACCCGAGGTCCAGCCT
CTTAAATAGATGCTGCCCCATGAAGGACTCACAGAACTAGCCTAGTTCAGGGTCCTTAGGGAGA
CAGTTGTACCTCAGCTTAGAGCAGCTTAACTTCAGCATGAGTGTGTGCTCATGGTGGGTTGGTC
CCCGAAGGCTCCATTGGCTGAGGATGGTGGACCAGGGGCTCCTGCAGGCAGAATGTTCTGTTTA
ATGATGTGGCTGCCCAGCAGCTTCCATGGGATAGAAGGGGACCTGCGGCTGATGTGTTCTGGCC
ACAAAGCTTTCCCTGAGGACTGCCTTCCGCGCTGATCCAGTGAAGGGGGCTCTGGTGACACCAG
GTCTGTGGGAACCCCACCACCATCACCATGGGCTGCATTTCCTCTCAGTATAAGGTTTCTGTTT
ACTGAAAAGGAAAGTGGTTTCCACTCCAGTTTGATGAACCTCCTCTGTTACTACATTACTCTGT
TGTCTTTACATCTTTGTTTTCTTCCTTTCTGTTGAGAGATGTGTGGGGTTTATGCCCTATAAAT
GGAAACATATGAACACTTAATCCATGGCCATGTGGAATTTTTGGGGTTATTGGGATAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_998905	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAO47228	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000001907
	ENSSSCP00000001907.1
	ENSSSCP00000053315.1
	ENSSSCP00000068438.1
	ENSSSCP00000070404.1
	ENSSSCP00015008274.1
	ENSSSCP00015008288.1
	ENSSSCP00015008308.1
	ENSSSCP00015008333.1
	ENSSSCP00015008341.1
	ENSSSCP00015008354.1
	ENSSSCP00025028045.1
	ENSSSCP00025028073.1
	ENSSSCP00025028105.1
	ENSSSCP00025028141.1
	ENSSSCP00025028178.1
	ENSSSCP00025028217.1
	ENSSSCP00030020585.1
	ENSSSCP00030020619.1
	ENSSSCP00030020628.1
	ENSSSCP00030020645.1
	ENSSSCP00030020663.1
	ENSSSCP00030020682.1
	ENSSSCP00035035999.1
	ENSSSCP00035036004.1
	ENSSSCP00035036006.1
	ENSSSCP00035036013.1
	ENSSSCP00035036016.1
	ENSSSCP00040008514.1
	ENSSSCP00040008529.1
	ENSSSCP00040008532.1
	ENSSSCP00040008546.1
	ENSSSCP00040008549.1
	ENSSSCP00040008580.1
	ENSSSCP00045003550.1
	ENSSSCP00045003565.1
	ENSSSCP00045003624.1
	ENSSSCP00045003632.1
	ENSSSCP00045003638.1
	ENSSSCP00045003644.1
	ENSSSCP00050000679.1
	ENSSSCP00050000687.1
	ENSSSCP00050000698.1
	ENSSSCP00050000714.1
	ENSSSCP00050000719.1
	ENSSSCP00050000728.1
	ENSSSCP00055021009.1
	ENSSSCP00055021032.1
	ENSSSCP00055021053.1
	ENSSSCP00055021070.1
	ENSSSCP00060027492.1
	ENSSSCP00060027497.1
	ENSSSCP00060027498.1
	ENSSSCP00060027502.1
	ENSSSCP00060027504.1
	ENSSSCP00065047063.1
	ENSSSCP00065047065.1
	ENSSSCP00065047067.1
	ENSSSCP00065047069.1
	ENSSSCP00065047073.1
	ENSSSCP00065047075.1
	ENSSSCP00065047076.1
	ENSSSCP00065047078.1
	ENSSSCP00070014833.1
GenBank Protein	Q865K9	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_998905 ⟸ NM_213740

- UniProtKB:

Q865K9 (UniProtKB/Swiss-Prot), A0A481C806 (UniProtKB/TrEMBL), A0A5G2QUB3 (UniProtKB/TrEMBL), A0A8D1DKB5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTTAILQRLSTLSVSGQHLRRLPKILEDGLPKMPGTVPETDVPQLFREPYIRAGYRPIGHEWRY
YFFSLFQKHNEVVNVWTHLLAALAVLLRFWAFVETEGLPWTSAHTLPLLLYVLSSITYLTFSLL
AHLLQSKSELSHYTFYFVDYVGVSVYQYGSALVHFFYASDQAWYERFWLFFLPAAAFCGWLSCT
GCCYAKYRYRRPYPVMRKVCQVVPAGLAFILDISPVAHRVALCHLSGCQEQAAWYHTLQIVFFL
VSAYFFSCPVPEKYFPGSCDIVGHGHQIFHAFLSICTLSQLEAILLDYKGRQEIFLHRHSPLSI
YAACLSFFFLVACSGATAALLREKIKARLSKKDS

hide sequence

RefSeq Acc Id:

ENSSSCP00000068438 ⟸ ENSSSCT00000088813

RefSeq Acc Id:

ENSSSCP00000053315 ⟸ ENSSSCT00000061228

RefSeq Acc Id:

ENSSSCP00000001907 ⟸ ENSSSCT00000001956

RefSeq Acc Id:

ENSSSCP00000070404 ⟸ ENSSSCT00000070539

RefSeq Acc Id:

ENSSSCP00000071590 ⟸ ENSSSCT00000081499

Protein Domains

DM10 EF-hand

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000001750	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSSSCG00015015873	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSSSCG00025048338	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSSSCG00025048550	UniProtKB/TrEMBL
	ENSSSCG00030033056	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSSSCG00030033225	UniProtKB/TrEMBL
	ENSSSCG00035064220	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSSSCG00040015133	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSSSCG00040015196	UniProtKB/TrEMBL
	ENSSSCG00045003262	UniProtKB/TrEMBL
	ENSSSCG00045003327	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSSSCG00050001839	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSSSCG00055013439	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSSSCG00060047213	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSSSCG00065076681	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSSSCG00070009207	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSSSCT00000001956	ENTREZGENE
	ENSSSCT00000001956.4	UniProtKB/Swiss-Prot
	ENSSSCT00000061228.3	UniProtKB/TrEMBL
	ENSSSCT00000070539.2	UniProtKB/TrEMBL
	ENSSSCT00000088813.2	UniProtKB/TrEMBL
	ENSSSCT00015021055.1	UniProtKB/TrEMBL
	ENSSSCT00015021082.1	UniProtKB/TrEMBL
	ENSSSCT00015021129.1	UniProtKB/TrEMBL
	ENSSSCT00015021202.1	UniProtKB/Swiss-Prot
	ENSSSCT00015021221.1	UniProtKB/Swiss-Prot
	ENSSSCT00015021254.1	UniProtKB/TrEMBL
	ENSSSCT00025065737.1	UniProtKB/TrEMBL
	ENSSSCT00025065790.1	UniProtKB/Swiss-Prot
	ENSSSCT00025065853.1	UniProtKB/Swiss-Prot
	ENSSSCT00025065918.1	UniProtKB/TrEMBL
	ENSSSCT00025065989.1	UniProtKB/TrEMBL
	ENSSSCT00025066066.1	UniProtKB/TrEMBL
	ENSSSCT00030045724.1	UniProtKB/TrEMBL
	ENSSSCT00030045778.1	UniProtKB/Swiss-Prot
	ENSSSCT00030045800.1	UniProtKB/Swiss-Prot
	ENSSSCT00030045845.1	UniProtKB/TrEMBL
	ENSSSCT00030045889.1	UniProtKB/TrEMBL
	ENSSSCT00030045952.1	UniProtKB/TrEMBL
	ENSSSCT00035086415.1	UniProtKB/TrEMBL
	ENSSSCT00035086430.1	UniProtKB/Swiss-Prot
	ENSSSCT00035086434.1	UniProtKB/Swiss-Prot
	ENSSSCT00035086444.1	UniProtKB/TrEMBL
	ENSSSCT00035086447.1	UniProtKB/TrEMBL
	ENSSSCT00040020344.1	UniProtKB/TrEMBL
	ENSSSCT00040020364.1	UniProtKB/Swiss-Prot
	ENSSSCT00040020371.1	UniProtKB/Swiss-Prot
	ENSSSCT00040020393.1	UniProtKB/TrEMBL
	ENSSSCT00040020402.1	UniProtKB/TrEMBL
	ENSSSCT00040020454.1	UniProtKB/TrEMBL
	ENSSSCT00045005331.1	UniProtKB/TrEMBL
	ENSSSCT00045005348.1	UniProtKB/TrEMBL
	ENSSSCT00045005420.1	UniProtKB/TrEMBL
	ENSSSCT00045005435.1	UniProtKB/Swiss-Prot
	ENSSSCT00045005442.1	UniProtKB/Swiss-Prot
	ENSSSCT00045005450.1	UniProtKB/TrEMBL
	ENSSSCT00050002259.1	UniProtKB/TrEMBL
	ENSSSCT00050002270.1	UniProtKB/TrEMBL
	ENSSSCT00050002300.1	UniProtKB/TrEMBL
	ENSSSCT00050002338.1	UniProtKB/Swiss-Prot
	ENSSSCT00050002350.1	UniProtKB/Swiss-Prot
	ENSSSCT00050002366.1	UniProtKB/TrEMBL
	ENSSSCT00055026441.1	UniProtKB/TrEMBL
	ENSSSCT00055026468.1	UniProtKB/Swiss-Prot
	ENSSSCT00055026492.1	UniProtKB/Swiss-Prot
	ENSSSCT00055026512.1	UniProtKB/TrEMBL
	ENSSSCT00060064107.1	UniProtKB/TrEMBL
	ENSSSCT00060064119.1	UniProtKB/Swiss-Prot
	ENSSSCT00060064122.1	UniProtKB/Swiss-Prot
	ENSSSCT00060064127.1	UniProtKB/TrEMBL
	ENSSSCT00060064129.1	UniProtKB/TrEMBL
	ENSSSCT00065105942.1	UniProtKB/TrEMBL
	ENSSSCT00065105944.1	UniProtKB/TrEMBL
	ENSSSCT00065105946.1	UniProtKB/TrEMBL
	ENSSSCT00065105949.1	UniProtKB/TrEMBL
	ENSSSCT00065105954.1	UniProtKB/TrEMBL
	ENSSSCT00065105961.1	UniProtKB/Swiss-Prot
	ENSSSCT00065105964.1	UniProtKB/Swiss-Prot
	ENSSSCT00065105967.1	UniProtKB/TrEMBL
	ENSSSCT00070017875.1	UniProtKB/Swiss-Prot
Gene3D-CATH	2.30.29.170	UniProtKB/TrEMBL
	EF-hand	UniProtKB/TrEMBL
InterPro	AdipoR/HlyIII-related	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DM10_dom	UniProtKB/TrEMBL
	EF-hand-dom_pair	UniProtKB/TrEMBL
	EF_hand_dom	UniProtKB/TrEMBL
	EFHC1/EFHC2/EFHB	UniProtKB/TrEMBL
KEGG Report	ssc:396559	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene	PAQR8	ENTREZGENE
PANTHER	EF-HAND DOMAIN-CONTAINING PROTEIN 1	UniProtKB/TrEMBL
	MEMBRANE PROGESTIN RECEPTOR BETA	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR12086	UniProtKB/TrEMBL
	PTHR20855	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	DUF1126	UniProtKB/TrEMBL
	HlyIII	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	DM10	UniProtKB/TrEMBL
	EF_HAND_2	UniProtKB/TrEMBL
SMART	DM10	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47473	UniProtKB/TrEMBL
UniProt	A0A287B9V3_PIG	UniProtKB/TrEMBL
	A0A481C806	ENTREZGENE, UniProtKB/TrEMBL
	A0A5G2QUB3	ENTREZGENE, UniProtKB/TrEMBL
	A0A5G2RGN9_PIG	UniProtKB/TrEMBL
	A0A8D0I2Z1_PIG	UniProtKB/TrEMBL
	A0A8D0MV19_PIG	UniProtKB/TrEMBL
	A0A8D0TWV8_PIG	UniProtKB/TrEMBL
	A0A8D1DKB5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1DKU7_PIG	UniProtKB/TrEMBL
	A0A8D1GM08_PIG	UniProtKB/TrEMBL
	A0A8D1JMX4_PIG	UniProtKB/TrEMBL
	A0A8D1U219_PIG	UniProtKB/TrEMBL
	A0A8D1VR92_PIG	UniProtKB/TrEMBL
	A0A8D2A9A6_PIG	UniProtKB/TrEMBL
	A0A8D2BL61_PIG	UniProtKB/TrEMBL
	MPRB_PIG	UniProtKB/Swiss-Prot, ENTREZGENE
VGNC ID	VGNC:91178	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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