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Gene: Cd226 (CD226 molecule) Rattus norvegicus

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Symbol:

Cd226

Name:

CD226 molecule

RGD ID:

1311513

Description:

Predicted to enable several functions, including identical protein binding activity; integrin binding activity; and protein kinase binding activity. Predicted to be involved in natural killer cell mediated cytotoxicity; positive regulation of immune response; and positive regulation of mast cell activation. Predicted to act upstream of or within positive regulation of natural killer cell cytokine production and positive regulation of type II interferon production. Predicted to be located in cell surface. Predicted to be active in external side of plasma membrane. Orthologous to human CD226 (CD226 molecule); INTERACTS WITH 1-naphthyl isothiocyanate; 17beta-estradiol; 17beta-estradiol 3-benzoate.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

CD226 antigen; LOC307199

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CD226 (CD226 molecule)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Cd226 (CD226 antigen)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cd226 (CD226 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CD226 (CD226 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CD226 (CD226 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CD226 (CD226 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CD226 (CD226 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cd226 (CD226 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	CD226 (CD226 molecule)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Cd226 (CD226 antigen)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	cd226 (CD226 molecule)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	XB5717875 [provisional:plac8]	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB)

Allele / Splice:

Cd226^{Tn(sb-T2/Bart3)2.141Mcwi}

Genetic Models:

F344-Cd226^{Tn(sb-T2/Bart3)2.141Mcwi}

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	84,723,330 - 84,819,836 (+)	NCBI		GRCr8
mRatBN7.2	18	82,449,924 - 82,545,107 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	82,450,568 - 82,543,051 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	84,505,997 - 84,598,578 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	85,179,224 - 85,271,795 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	83,053,202 - 83,147,001 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	86,299,392 - 86,394,772 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	86,299,463 - 86,394,765 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	85,337,942 - 85,433,295 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	86,064,574 - 86,157,909 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	86,157,214 - 86,230,246 (+)	NCBI
Celera	18	81,000,246 - 81,093,141 (+)	NCBI		Celera
Cytogenetic Map	18	q13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cd226	Rat	Chronic Hepatitis C	treatment	ISO	CD226 (Homo sapiens)	9068941		RGD	PMID:21695691 and REF_RGD_ID:40818295

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cd226	Rat	chromosome 18q deletion syndrome		ISO	CD226 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Monosomy 18q and deletion 18q	ClinVar	PMID:25741868 and PMID:31690835
Cd226	Rat	intestinal volvulus		ISO	CD226 (Homo sapiens)	8554872	ClinVar Annotator: match by term: INTESTINAL MALROTATION and FAMILIAL	ClinVar	PMID:25741868
Cd226	Rat	Neurodevelopmental Disorders		ISO	CD226 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868
Cd226	Rat	pulmonary valve stenosis		ISO	CD226 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Pulmonary valve stenosis	ClinVar	PMID:25741868
Cd226	Rat	Volvulus Of Midgut		ISO	CD226 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Volvulus of midgut	ClinVar	PMID:25741868

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cd226	Rat	Colorectal Neoplasms		ISO	CD226 (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:16015041
Cd226	Rat	endometriosis		ISO	CD226 (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:20864642
Cd226	Rat	Spontaneous Abortions		ISO	CD226 (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:18539642
Cd226	Rat	systemic lupus erythematosus		ISO	CD226 (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:26808113

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cd226	Rat	1-naphthyl isothiocyanate	decreases expression	EXP		6480464	1-Naphthylisothiocyanate results in decreased expression of CD226 mRNA	CTD	PMID:30723492
Cd226	Rat	17beta-estradiol	multiple interactions	EXP		6480464	[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of CD226 mRNA	CTD	PMID:32741896
Cd226	Rat	17beta-estradiol 3-benzoate	multiple interactions	EXP		6480464	[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of CD226 mRNA	CTD	PMID:32741896
Cd226	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	Cd226 (Mus musculus)	6480464	Tetrachlorodibenzodioxin affects the expression of CD226 mRNA	CTD	PMID:21570461
Cd226	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	EXP		6480464	Tetrachlorodibenzodioxin results in decreased expression of CD226 mRNA	CTD	PMID:34747641
Cd226	Rat	2,4-dibromophenyl 2,4,5-tribromophenyl ether	affects expression	ISO	Cd226 (Mus musculus)	6480464	2 more ...	CTD	PMID:38648751
Cd226	Rat	aflatoxin B1	increases methylation	ISO	CD226 (Homo sapiens)	6480464	Aflatoxin B1 results in increased methylation of CD226 gene and Aflatoxin B1 results in increased methylation of CD226 intron	CTD	PMID:27153756 and PMID:30157460
Cd226	Rat	aldehydo-D-glucose	multiple interactions	ISO	Cd226 (Mus musculus)	6480464	[lard co-treated with Cholesterol and Dietary co-treated with Dietary Sucrose co-treated with Fructose co-treated with Glucose] results in decreased expression of CD226 mRNA	CTD	PMID:37567420
Cd226	Rat	alpha-Zearalanol	increases expression	EXP		6480464	Zeranol results in increased expression of CD226 mRNA	CTD	PMID:35163327
Cd226	Rat	antirheumatic drug	decreases expression	ISO	CD226 (Homo sapiens)	6480464	Antirheumatic Agents results in decreased expression of CD226 mRNA	CTD	PMID:24449571
Cd226	Rat	aristolochic acid A	increases expression	ISO	CD226 (Homo sapiens)	6480464	aristolochic acid I results in increased expression of CD226 mRNA	CTD	PMID:33212167
Cd226	Rat	atrazine	affects methylation	EXP		6480464	Atrazine affects the methylation of CD226 gene	CTD	PMID:28931070
Cd226	Rat	benzo[a]pyrene	affects methylation	ISO	CD226 (Homo sapiens)	6480464	Benzo(a)pyrene affects the methylation of CD226 intron	CTD	PMID:30157460
Cd226	Rat	benzo[a]pyrene	increases expression	ISO	CD226 (Homo sapiens)	6480464	Benzo(a)pyrene results in increased expression of CD226 mRNA	CTD	PMID:30453624
Cd226	Rat	benzo[b]fluoranthene	decreases expression	ISO	Cd226 (Mus musculus)	6480464	benzo(b)fluoranthene results in decreased expression of CD226 mRNA	CTD	PMID:26377693
Cd226	Rat	bis(2-ethylhexyl) phthalate	increases expression	ISO	Cd226 (Mus musculus)	6480464	Diethylhexyl Phthalate results in increased expression of CD226 mRNA	CTD	PMID:35550907
Cd226	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of CD226 mRNA	CTD	PMID:25181051 and PMID:32145629
Cd226	Rat	bisphenol A	increases expression	ISO	Cd226 (Mus musculus)	6480464	bisphenol A results in increased expression of CD226 mRNA	CTD	PMID:32156529
Cd226	Rat	bisphenol A	affects methylation	ISO	CD226 (Homo sapiens)	6480464	bisphenol A affects the methylation of CD226 gene	CTD	PMID:31601247
Cd226	Rat	carbon nanotube	decreases expression	ISO	Cd226 (Mus musculus)	6480464	Nanotubes more ...	CTD	PMID:25554681
Cd226	Rat	CGP 52608	multiple interactions	ISO	CD226 (Homo sapiens)	6480464	CGP 52608 promotes the reaction [RORA protein binds to CD226 gene]	CTD	PMID:28238834
Cd226	Rat	clothianidin	decreases expression	ISO	CD226 (Homo sapiens)	6480464	clothianidin results in decreased expression of CD226 mRNA	CTD	PMID:31626844
Cd226	Rat	D-glucose	multiple interactions	ISO	Cd226 (Mus musculus)	6480464	[lard co-treated with Cholesterol and Dietary co-treated with Dietary Sucrose co-treated with Fructose co-treated with Glucose] results in decreased expression of CD226 mRNA	CTD	PMID:37567420
Cd226	Rat	disodium selenite	multiple interactions	ISO	Cd226 (Mus musculus)	6480464	[ptaquiloside co-treated with Sodium Selenite] results in decreased expression of CD226 mRNA	CTD	PMID:23274088
Cd226	Rat	folic acid	increases expression	ISO	Cd226 (Mus musculus)	6480464	Folic Acid results in increased expression of CD226 mRNA	CTD	PMID:25629700
Cd226	Rat	fonofos	increases methylation	ISO	CD226 (Homo sapiens)	6480464	Fonofos results in increased methylation of CD226 promoter	CTD	PMID:22847954
Cd226	Rat	fructose	multiple interactions	ISO	Cd226 (Mus musculus)	6480464	[lard co-treated with Cholesterol and Dietary co-treated with Dietary Sucrose co-treated with Fructose co-treated with Glucose] results in decreased expression of CD226 mRNA	CTD	PMID:37567420
Cd226	Rat	genistein	increases expression	ISO	Cd226 (Mus musculus)	6480464	Genistein results in increased expression of CD226 mRNA	CTD	PMID:32186404
Cd226	Rat	glucose	multiple interactions	ISO	Cd226 (Mus musculus)	6480464	[lard co-treated with Cholesterol and Dietary co-treated with Dietary Sucrose co-treated with Fructose co-treated with Glucose] results in decreased expression of CD226 mRNA	CTD	PMID:37567420
Cd226	Rat	mercury atom	increases expression	ISO	CD226 (Homo sapiens)	6480464	Mercury results in increased expression of CD226 mRNA	CTD	PMID:16823088
Cd226	Rat	mercury(0)	increases expression	ISO	CD226 (Homo sapiens)	6480464	Mercury results in increased expression of CD226 mRNA	CTD	PMID:16823088
Cd226	Rat	nickel atom	increases expression	ISO	CD226 (Homo sapiens)	6480464	Nickel results in increased expression of CD226 mRNA	CTD	PMID:25583101
Cd226	Rat	nitrates	multiple interactions	ISO	Cd226 (Mus musculus)	6480464	[Particulate Matter results in increased abundance of Nitrates] which results in increased expression of CD226 mRNA	CTD	PMID:35964746
Cd226	Rat	parathion	increases methylation	ISO	CD226 (Homo sapiens)	6480464	Parathion results in increased methylation of CD226 promoter	CTD	PMID:22847954
Cd226	Rat	phenformin	decreases expression	EXP		6480464	Phenformin results in decreased expression of CD226 mRNA	CTD	PMID:31324951
Cd226	Rat	pirinixic acid	increases expression	ISO	Cd226 (Mus musculus)	6480464	pirinixic acid results in increased expression of CD226 mRNA	CTD	PMID:20813756
Cd226	Rat	progesterone	increases expression	ISO	CD226 (Homo sapiens)	6480464	Progesterone results in increased expression of CD226 mRNA	CTD	PMID:20864642
Cd226	Rat	Ptaquiloside	multiple interactions	ISO	Cd226 (Mus musculus)	6480464	[ptaquiloside co-treated with Sodium Selenite] results in decreased expression of CD226 mRNA	CTD	PMID:23274088
Cd226	Rat	rotenone	decreases expression	EXP		6480464	Rotenone results in decreased expression of CD226 mRNA	CTD	PMID:28374803
Cd226	Rat	silicon dioxide	increases expression	ISO	Cd226 (Mus musculus)	6480464	Silicon Dioxide results in increased expression of CD226 mRNA	CTD	PMID:29341224
Cd226	Rat	sodium arsenite	increases expression	ISO	Cd226 (Mus musculus)	6480464	sodium arsenite results in increased expression of CD226 mRNA	CTD	PMID:37682722
Cd226	Rat	sunitinib	increases expression	ISO	CD226 (Homo sapiens)	6480464	Sunitinib results in increased expression of CD226 mRNA	CTD	PMID:31533062
Cd226	Rat	terbufos	increases methylation	ISO	CD226 (Homo sapiens)	6480464	terbufos results in increased methylation of CD226 promoter	CTD	PMID:22847954
Cd226	Rat	testosterone	multiple interactions	EXP		6480464	[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of CD226 mRNA	CTD	PMID:32741896
Cd226	Rat	titanium dioxide	increases expression	ISO	Cd226 (Mus musculus)	6480464	titanium dioxide results in increased expression of CD226 mRNA	CTD	PMID:35295148
Cd226	Rat	triphenyl phosphate	affects expression	ISO	CD226 (Homo sapiens)	6480464	triphenyl phosphate affects the expression of CD226 mRNA	CTD	PMID:37042841
Cd226	Rat	vinclozolin	increases expression	EXP		6480464	vinclozolin results in increased expression of CD226 mRNA	CTD	PMID:23034163
Cd226	Rat	zinc atom	decreases expression	ISO	CD226 (Homo sapiens)	6480464	Zinc deficiency results in decreased expression of CD226 mRNA	CTD	PMID:22171008
Cd226	Rat	zinc(0)	decreases expression	ISO	CD226 (Homo sapiens)	6480464	Zinc deficiency results in decreased expression of CD226 mRNA	CTD	PMID:22171008

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cd226	Rat	biological_process		ND		1598407	4/2009: No relevant rat data	RGD
Cd226	Rat	natural killer cell mediated cytotoxicity	involved_in	ISO	CD226 (Homo sapiens)	1624291	PMID:8673704	RGD	PMID:8673704
Cd226	Rat	natural killer cell mediated cytotoxicity	involved_in	IEA	UniProtKB:Q15762 and ensembl:ENSP00000461947	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Cd226	Rat	positive regulation of Fc receptor mediated stimulatory signaling pathway	involved_in	ISO	CD226 (Homo sapiens)	1624291	PMID:16831868	RGD	PMID:16831868
Cd226	Rat	positive regulation of Fc receptor mediated stimulatory signaling pathway	involved_in	IEA	UniProtKB:Q15762 and ensembl:ENSP00000461947	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Cd226	Rat	positive regulation of Fc receptor mediated stimulatory signaling pathway	involved_in	IBA	PANTHER:PTN002931336 and UniProtKB:Q15762	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Cd226	Rat	positive regulation of immunoglobulin mediated immune response	involved_in	ISO	CD226 (Homo sapiens)	1624291	PMID:16831868	RGD	PMID:16831868
Cd226	Rat	positive regulation of immunoglobulin mediated immune response	involved_in	IEA	UniProtKB:Q15762 and ensembl:ENSP00000461947	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Cd226	Rat	positive regulation of immunoglobulin mediated immune response	involved_in	IBA	PANTHER:PTN002931336 and UniProtKB:Q15762	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Cd226	Rat	positive regulation of mast cell activation	involved_in	ISO	CD226 (Homo sapiens)	1624291	PMID:16831868	RGD	PMID:16831868
Cd226	Rat	positive regulation of mast cell activation	involved_in	IEA	UniProtKB:Q15762 and ensembl:ENSP00000461947	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Cd226	Rat	positive regulation of natural killer cell cytokine production	involved_in	IEA	InterPro:IPR042842	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Cd226	Rat	positive regulation of natural killer cell cytokine production	acts_upstream_of_or_within	ISO	Cd226 (Mus musculus)	1624291	MGI:4454325 PMID:24658051	RGD	PMID:24658051
Cd226	Rat	positive regulation of natural killer cell cytokine production	acts_upstream_of_or_within	IEA	UniProtKB:Q8K4F0 and ensembl:ENSMUSP00000158324	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Cd226	Rat	positive regulation of natural killer cell mediated cytotoxicity	involved_in	ISO	CD226 (Homo sapiens)	1624291	PMID:16304049	RGD	PMID:16304049
Cd226	Rat	positive regulation of natural killer cell mediated cytotoxicity	involved_in	IEA	UniProtKB:Q15762 and ensembl:ENSP00000461947	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Cd226	Rat	positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target	involved_in	ISO	CD226 (Homo sapiens)	1624291	PMID:12913096	RGD	PMID:12913096
Cd226	Rat	positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target	involved_in	IEA	UniProtKB:Q15762 and ensembl:ENSP00000461947	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Cd226	Rat	positive regulation of T cell receptor signaling pathway	involved_in	ISO	CD226 (Homo sapiens)	1624291	PMID:26755705	RGD	PMID:26755705
Cd226	Rat	positive regulation of T cell receptor signaling pathway	involved_in	IEA	UniProtKB:Q15762 and ensembl:ENSP00000461947	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Cd226	Rat	positive regulation of T cell receptor signaling pathway	involved_in	IBA	PANTHER:PTN002931336 and UniProtKB:Q15762	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Cd226	Rat	positive regulation of type II interferon production	acts_upstream_of_or_within	IEA	UniProtKB:Q8K4F0 and ensembl:ENSMUSP00000158324	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Cd226	Rat	positive regulation of type II interferon production	acts_upstream_of_or_within	ISO	Cd226 (Mus musculus)	1624291	MGI:4454325 PMID:24658051	RGD	PMID:24658051

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cd226	Rat	cell surface	located_in	ISO	CD226 (Homo sapiens)	1624291	PMID:16831868	RGD	PMID:16831868
Cd226	Rat	cell surface	located_in	IEA	UniProtKB:Q15762 and ensembl:ENSP00000461947	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Cd226	Rat	external side of plasma membrane	located_in	ISO	Cd226 (Mus musculus)	1624291	PMID:19648922	RGD	PMID:19648922
Cd226	Rat	external side of plasma membrane	located_in	IEA	UniProtKB:Q8K4F0 and ensembl:ENSMUSP00000158324	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Cd226	Rat	external side of plasma membrane	is_active_in	IBA	MGI:3039602 and PANTHER:PTN002931336	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cd226	Rat	cell adhesion molecule binding	enables	IBA	PANTHER:PTN002931336 and UniProtKB:Q15762	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Cd226	Rat	cell adhesion molecule binding	enables	IEA	UniProtKB:Q15762 and ensembl:ENSP00000461947	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Cd226	Rat	cell adhesion molecule binding	enables	ISO	CD226 (Homo sapiens)	1624291	UniProtKB:P15151 more ...	RGD	PMID:12913096
Cd226	Rat	identical protein binding	enables	ISO	CD226 (Homo sapiens)	1624291	UniProtKB:Q15762 more ...	RGD	PMID:25465800 and PMID:30591568
Cd226	Rat	identical protein binding	enables	IEA	UniProtKB:Q15762 and ensembl:ENSP00000461947	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Cd226	Rat	integrin binding	enables	ISO	CD226 (Homo sapiens)	1624291	UniProtKB:P05107 and PMID:16831868	RGD	PMID:16831868
Cd226	Rat	integrin binding	enables	IEA	UniProtKB:Q15762 and ensembl:ENSP00000461947	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Cd226	Rat	protein binding	enables	ISO	CD226 (Homo sapiens)	1624291	UniProtKB:P15151 more ...	RGD	PMID:21982860 more ...
Cd226	Rat	protein binding	enables	ISO	Cd226 (Mus musculus)	1624291	MGI:107741 more ...	RGD	PMID:15752754 more ...
Cd226	Rat	protein kinase binding	enables	ISO	CD226 (Homo sapiens)	1624291	UniProtKB:P06241 and PMID:16831868	RGD	PMID:16831868
Cd226	Rat	protein kinase binding	enables	IEA	UniProtKB:Q15762 and ensembl:ENSP00000461947	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Cd226	Rat	signaling receptor activity	enables	ISO	CD226 (Homo sapiens)	1624291	PMID:15039383	RGD	PMID:15039383
Cd226	Rat	signaling receptor activity	enables	IEA	UniProtKB:Q15762 and ensembl:ENSP00000461947	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Comprehensive gene review and curation	RGD comprehensive gene curation

PMID:12913096	PMID:15752754	PMID:16304049	PMID:16831868	PMID:19648922	PMID:22728856	PMID:24658051	PMID:26755705

Cd226
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	84,723,330 - 84,819,836 (+)	NCBI		GRCr8
mRatBN7.2	18	82,449,924 - 82,545,107 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	82,450,568 - 82,543,051 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	84,505,997 - 84,598,578 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	85,179,224 - 85,271,795 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	83,053,202 - 83,147,001 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	86,299,392 - 86,394,772 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	86,299,463 - 86,394,765 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	85,337,942 - 85,433,295 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	86,064,574 - 86,157,909 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	86,157,214 - 86,230,246 (+)	NCBI
Celera	18	81,000,246 - 81,093,141 (+)	NCBI		Celera
Cytogenetic Map	18	q13	NCBI

CD226
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	69,853,274 - 69,961,773 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	69,831,158 - 69,961,803 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	18	67,520,510 - 67,624,035 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	65,681,172 - 65,775,139 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	18	65,681,174 - 65,775,140	NCBI
Celera	18	64,377,737 - 64,472,107 (-)	NCBI		Celera
Cytogenetic Map	18	q22.2	NCBI
HuRef	18	64,248,832 - 64,343,180 (-)	NCBI		HuRef
CHM1_1	18	67,525,491 - 67,619,446 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	18	70,070,086 - 70,220,680 (-)	NCBI		T2T-CHM13v2.0

Cd226
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	89,195,078 - 89,290,356 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	89,195,091 - 89,290,353 (+)	Ensembl		GRCm39 Ensembl
GRCm38	18	89,176,954 - 89,272,232 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	89,176,967 - 89,272,229 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	89,366,819 - 89,439,719 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	89,331,620 - 89,404,520 (+)	NCBI		MGSCv36	mm8
Celera	18	90,925,452 - 90,998,347 (+)	NCBI		Celera
Cytogenetic Map	18	E4	NCBI
cM Map	18	59.05	NCBI

Cd226
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	53,473,131 - 53,560,924 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	53,408,861 - 53,560,896 (-)	NCBI	ChiLan1.0	ChiLan1.0

CD226
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	87,392,451 - 87,488,644 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	73,072,672 - 73,178,859 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	63,238,477 - 63,379,346 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	66,533,949 - 66,627,580 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	66,533,949 - 66,627,580 (-)	Ensembl	panpan1.1		panPan2

CD226
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	8,348,628 - 8,437,520 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	8,351,207 - 8,435,145 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	9,360,824 - 9,448,915 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	8,180,313 - 8,268,617 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	8,180,904 - 8,267,414 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	8,201,794 - 8,289,667 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	8,162,053 - 8,249,918 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	8,372,145 - 8,460,491 (+)	NCBI		UU_Cfam_GSD_1.0

CD226
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	152,882,762 - 152,979,845 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	152,872,878 - 152,977,162 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	169,304,334 - 169,418,889 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CD226
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	9,790,483 - 9,900,376 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	9,811,168 - 9,901,830 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666060	15,904,002 - 16,007,951 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cd226
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624806	11,324,344 - 11,388,206 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624806	11,324,239 - 11,390,487 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Cd226
395 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	131
Count of miRNA genes:	91
Interacting mature miRNAs:	115
Transcripts:	ENSRNOT00000058152
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
9589041	Epfw12	Epididymal fat weight QTL 12	17.08	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	18	46640675	83828827	Rat
2303584	Gluco55	Glucose level QTL 55	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	18	48520044	83828827	Rat
8694432	Bw165	Body weight QTL 165	3.81	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	18	46640675	83828827	Rat
1331741	Bp232	Blood pressure QTL 232	3.59112		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	18	21372893	83213037	Rat
1298072	Cia26	Collagen induced arthritis QTL 26	3.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	18	54709769	83828827	Rat
1600373	Mamtr6	Mammary tumor resistance QTL 6			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	18	19278901	83218561	Rat
2303571	Bw92	Body weight QTL 92	3		body mass (VT:0001259)	body weight (CMO:0000012)	18	48520044	83828827	Rat
6903353	Bp353	Blood pressure QTL 353	2.8		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	18	59796478	83828827	Rat
1598826	Anxrr20	Anxiety related response QTL 20	3.04		body movement coordination trait (VT:0005424)	number of rearing movements in an experimental apparatus (CMO:0001752)	18	41432971	83828827	Rat
1578667	Bss21	Bone structure and strength QTL 21	3.5		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	18	11791518	83218561	Rat
2303120	Mamtr8	Mammary tumor resistance QTL 8		0.001	mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	18	31359408	83218561	Rat
738008	Hcar14	Hepatocarcinoma resistance QTL 14	4.3		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion number (CMO:0001462)	18	51464733	83218561	Rat
724542	Kidm2	Kidney mass QTL 2	2.6		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	18	59172115	83828827	Rat
6903356	Bp354	Blood pressure QTL 354	4.6		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	59796478	83828827	Rat
61367	Iddm4	Insulin dependent diabetes mellitus QTL 4	2.33	0.0074	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	18	38192455	83192455	Rat
6893683	Bw110	Body weight QTL 110	2.7	0.002	body mass (VT:0001259)	body weight (CMO:0000012)	18	43345022	83828827	Rat
8694366	Abfw8	Abdominal fat weight QTL 8	6.38	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	18	46640675	83828827	Rat
1578661	Bss20	Bone structure and strength QTL 20	3.7		femur morphology trait (VT:0000559)	femoral neck cross-sectional area (CMO:0001697)	18	11791518	83218561	Rat

This gene Cd226 is modified in the following models/strains:

F344-Cd226^{Tn(sb-T2/Bart3)2.141Mcwi}

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	8	47	113	91	90	59	25	59	6	213	92	93	45	60	31


RefSeq Transcripts	NM_001107370	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006255028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006255031	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600934	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600935	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600937	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600938	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600939	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600940	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600941	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096758	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096759	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277286	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000058152 ⟹ ENSRNOP00000054956

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	18	82,450,568 - 82,543,051 (+)	Ensembl
Rnor_6.0 Ensembl	18	86,299,463 - 86,392,713 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000091778 ⟹ ENSRNOP00000073108

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	18	86,307,646 - 86,394,765 (+)	Ensembl

RefSeq Acc Id:

NM_001107370 ⟹ NP_001100840

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	84,725,316 - 84,817,780 (+)	NCBI
mRatBN7.2	18	82,450,568 - 82,543,051 (+)	NCBI
Rnor_6.0	18	86,299,463 - 86,392,713 (+)	NCBI
Rnor_5.0	18	85,337,942 - 85,433,295 (+)	NCBI
RGSC_v3.4	18	86,064,574 - 86,157,909 (+)	RGD
Celera	18	81,000,246 - 81,093,141 (+)	RGD

Sequence:

show sequence

ATTTGCCTAGGTCTTGCACTTGTATTCCTGTAATGTACTTGCAAGAATACATTTCCTAGAAACCTTAAGAGCATCACCACAACAACGGTGAAGAAAAGAAGGAGAAGGAAAGGGCAGTGGCGAAGGCA
GCATGGACACAGAGACCTAGGCCCTGGGCAATGTGGAAGGCAGTCCAACCTCCTGAACCGTTTCCAGAGATGGCTTATCTTACTTGGCTTTTGGCTATTCTTCATGTGCACAAAGCGCTGTGTGAAGA
GACATTGTGGGACACAACTGTTCGTCTTTCTGAGACTATGACTTTGGAATGTGTATATCCATTGACGGATAACTTAACCCAGGCGGAGTGGACCAAGGACACTGGCACAAAGAAAGTGAACATAGCTG
TTTACCACCCTAACCATAATATGCATATAGATCCTAACTACCTCCATAGAGTGCACTTTCAAAATGCAACAGTGGGGTTCCGCAACATGAGCCTTTCCTTTTACAATGCCTCTGAAGCAGACATCGGC
ATCTACACCTGCTTGTTTCATGCTTTCCCACGTGGATCTTGGGAAAAGAAGATAAAAGTTGTCCAGTCAGATAGTTTTGAGACAACAGCACCCTTGGATAGCTACCTGTCTGCAGAACCTGGACAAAA
TGTCACACTCAGTTGCCAGCTTGAAAGGACTTGGCTAGTGCAACTAGTCATATGGGAAAAAGTCCAGCCCCATCAGGTAGACATCTTAGCTTCCTGTAACCTATCTCAAGGGACAAGATACACTTCAA
AGTACCTAAGACAAACATGGAGCGACTGTAGCCAGGAGAGCATGAAGAGTGCTCTCATTATACCCTATGCCATGGCTGCTGACTCAGGACTTTACAGATGCCGCTCTGAGGCCAGTACGGGAACAAAC
AAAACCTGTGTCATAAGGCTGATCATAACTGATGGTGGAACCAATAACCACTTTATCCTTCTCATTGTCGGAGGGCTAGCCTCACTGCTACTTGTCATCCTAATTACCATCATTATTATCTTATTCAA
CAGGAAGAGAAGGAGACAGGTGAGAACTCCGCTTAAAGAGCTCAGAGATAAACAGAGTAAGGTAGCCACCAACTGCAGAAGTCCAACTTCTCCCATTCAGACTACAGATGATGAAAAAGAGGACATTT
ATGTTAACTATCCAACTTTCTCTCGGAGACCAAAACCAAGATTCTAAGCCGCTCTTTTGCCTGAGCACATTAGTAATGACTTCTATGGCATGGATTTTTACCCATGTCCTCCTCACCACCAGGATCTA
CATTGATTAAAAAGTTGATTGGATTTGTTTTATCTCATATATAGAAGTACTTTATGACCTGGGAATATTCTTAACAGAGATGGATTTGAAAACCCAAATCTAATTAACCGTTCAAGGAACAGTTCAAG
GAACCATCTTCCATTATATAACAGAGTAATCTAGAGAGGACTAAGTACCACGTGGCTTTCTTGCTCTACTTGAAATCAGCTGTGAACATAAGTTTATTTCTGGATGCTTCCTACAGTGTTGGTTCTGC
TTATATACTACTGGTCCAACTCTCGTACTGCTTCTCTCAGATGCTCCCATGAGTATTGCCAAGGACACTTGGTAGAAAGTTTACTGGTTAAACACAGGAAACAAAGTTTATTATTCACTCACTAGCAA
GAAGGTAGCATTACCACAAAAGATTAGATGACCTAAATTAGCTGTGGGTTCAAGACCAGGACAAAAGGGTTACTTGGGAATTCTGAGTATTGCTAAAAAGGCTGAAAGGGACCTAGAAGTTGAGTTAT
TTTTAACAAACTTTAACTTCAAAGGCATTGCTTATTAACTAGATAACAAATGAATGTACTGTAGTATCAGCATAATTCAAAAGAATACATGCCAAGGAATGCCGAGAGCAGAGATAATTGTGTAACTA
TTTCTTCCCTTTCTGGTTTCAAATAAATTCATTTCTAATTCTATAGAGAAGTCTTGCTACCCATTCAGGACTGGTCTTCTATACAGTGAGATGGTCCAATTAGAAATAATTCTTTTAATAATGCTTTT
TCTACTTTCGAGAGTTATTTTAATATGTAAACTTGTGAGTTTAAAATCTTCAAAATGAGCACATGAAAAGAGATTGATGGTTTTAAGTAGTAGAATACAGTAATGTAGGAATCTGAGAGCAGAGAGTT
TGGGAGGGGGTGAAGAGGAAAAGACATCACCAAATAATGATATATGAGAGAAAATCTACACTTCAGAGTTTGATCAAGGCCATATCTCCCAATTTGGCTGGCACTGAGATAATGCACCTGATGTCTCC
ATTTTAGA

hide sequence

RefSeq Acc Id:

XM_006255028 ⟹ XP_006255090

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	84,723,330 - 84,819,836 (+)	NCBI
mRatBN7.2	18	82,449,958 - 82,545,107 (+)	NCBI
Rnor_6.0	18	86,299,395 - 86,394,772 (+)	NCBI
Rnor_5.0	18	85,337,942 - 85,433,295 (+)	NCBI

Sequence:

show sequence

CAGTACAGATGAAGCTGACTGCTCTTTCCTGTTTGTTTCTCAGCAAACTATCCCAAAGAATCCT
CAGCATTTGCCTAGGTCTTGCACTTGTATTCCTGTAATGTACTTGCAAGAATACATTTCCTAGAAACCTTAAGAGCATCACCACAACAACGGTGAAGAAAAGAAGGAGAAGGAAAGGGCAGTGGCGAA
GGCAGCATGGACACAGAGACCTAGGCCCTGGGCAATGTGGAAGGCAGGTACCAACCACCTTCAGCATCATGTCAATCTCTTCTTAATAAAACGGCATGGGATTTTATTTTTAAATTGCATTTTTGTAT
ATTCTTGTTGCACAGAGCTGAGTCTGGCACAGAGGACACACTCAGTAAACATTTGTCAAATAAAAGAATCTTTCTTGAAATTTGTATCTTTTGAAGTAAACTGATTATTCGACAGAGAAATAACTGCA
GCCTATCCATTCCTGTACGATAGCAAACCTTCCTTTGAAGCTGAAACTTCTTTCCTGTGCTCATACTTCAGAGAAAAAGAAGAAGCTGATAACATCTGAGAGGAAGGAAATAGCTCTTCATGCTGAGT
TGTGAATATAACATCACACACACATTTTTTTTTAAACAGTCCAACCTCCTGAACCGTTTCCAGAGATGGCTTATCTTACTTGGCTTTTGGCTATTCTTCATGTGCACAAAGCGCTGTGTGAAGAGACA
TTGTGGGACACAACTGTTCGTCTTTCTGAGACTATGACTTTGGAATGTGTATATCCATTGACGGATAACTTAACCCAGGCGGAGTGGACCAAGGACACTGGCACAAAGAAAGTGAACATAGCTGTTTA
CCACCCTAACCATAATATGCATATAGATCCTAACTACCTCCATAGAGTGCACTTTCAAAATGCAACAGTGGGGTTCCGCAACATGAGCCTTTCCTTTTACAATGCCTCTGAAGCAGACATCGGCATCT
ACACCTGCTTGTTTCATGCTTTCCCACGTGGATCTTGGGAAAAGAAGATAAAAGTTGTCCAGTCAGATAGTTTTGAGACAACAGCACCCTTGGATAGCTACCTGTCTGCAGAACCTGGACAAAATGTC
ACACTCAGTTGCCAGCTTGAAAGGACTTGGCTAGTGCAACTAGTCATATGGGAAAAAGTCCAGCCCCATCAGGTAGACATCTTAGCTTCCTGTAACCTATCTCAAGGGACAAGATACACTTCAAAGTA
CCTAAGACAAACATGGAGCGACTGTAGCCAGGAGAGCATGAAGAGTGCTCTCATTATACCCTATGCCATGGCTGCTGACTCAGGACTTTACAGATGCCGCTCTGAGGCCAGTACGGGAACAAACAAAA
CCTGTGTCATAAGGCTGATCATAACTGATGGTGGAACCAATAACCACTTTATCCTTCTCATTGTCGGAGGGCTAGCCTCACTGCTACTTGTCATCCTAATTACCATCATTATTATCTTATTCAACAGG
AAGAGAAGGAGACAGGTGAGAACTCCGCTTAAAGAGCTCAGAGATAAACAGAGTAAGGTAGCCACCAACTGCAGAAGTCCAACTTCTCCCATTCAGACTACAGATGATGAAAAAGAGGACATTTATGT
TAACTATCCAACTTTCTCTCGGAGACCAAAACCAAGATTCTAAGCCGCTCTTTTGCCTGAGCACATTAGTAATGACTTCTATGGCATGGATTTTTACCCATGTCCTCCTCACCACCAGGATCTACATT
GATTAAAAAGTTGATTGGATTTGTTTTATCTCATATATAGAAGTACTTTATGACCTGGGAATATTCTTAACAGAGATGGATTTGAAAACCCAAATCTAATTAACCGTTCAAGGAACAGTTCAAGGAAC
CATCTTCCATTATATAACAGAGTAATCTAGAGAGGACTAAGTACCACGTGGCTTTCTTGCTCTACTTGAAATCAGCTGTGAACATAAGTTTATTTCTGGATGCTTCCTACAGTGTTGGTTCTGCTTAT
ATACTACTGGTCCAACTCTCGTACTGCTTCTCTCAGATGCTCCCATGAGTATTGCCAAGGACACTTGGTAGAAAGTTTACTGGTTAAACACAGGAAACAAAGTTTATTATTCACTCACTAGCAAGAAG
GTAGCATTACCACAAAAGATTAGATGACCTAAATTAGCTGTGGGTTCAAGACCAGGACAAAAGGGTTACTTGGGAATTCTGAGTATTGCTAAAAAGGCTGAAAGGGACCTAGAAGTTGAGTTATTTTT
AACAAACTTTAACTTCAAAGGCATTGCTTATTAACTAGATAACAAATGAATGTACTGTAGTATCAGCATAATTCAAAAGAATACATGCCAAGGAATGCCGAGAGCAGAGATAATTGTGTAACTATTTC
TTCCCTTTCTGGTTTCAAATAAATTCATTTCTAATTCTATAGAGAAGTCTTGCTACCCATTCAGGACTGGTCTTCTATACAGTGAGATGGTCCAATTAGAAATAATTCTTTTAATAATGCTTTTTCTA
CTTTCGAGAGTTATTTTAATATGTAAACTTGTGAGTTTAAAATCTTCAAAATGAGCACATGAAAAGAGATTGATGGTTTTAAGTAGTAGAATACAGTAATGTAGGAATCTGAGAGCAGAGAGTTTGGG
AGGGGGTGAAGAGGAAAAGACATCACCAAATAATGATATATGAGAGAAAATCTACACTTCAGAGTTTGATCAAGGCCATATCTCCCAATTTGGCTGGCACTGAGATAATGCACCTGATGTCTCCATTT
TAGAAAAAAAATGAGTATTTGTGGAATTAAATAAAACTCTAGTTATCTCAAAACTATGGTAATCATTATCAAATAGAATGATATTTAGTATCTAAAAGACCCATTTCTTATCTGTAAAAAATTTAAAT
GATCATAATCTTTAAATATTCATTGTGGAAAACTTCGATTAAGTTTGTGGTGTGAAAATTTTGTTACAAACTTAAGTGAAAACAATCCAAATGCTAATGCGGTTACATAGATTCTAAAATGCAATTCA
TAGTTTTAAGATAATTAGTAGATACTTCATATTTTAACCTTAGATACCATGCATGATAAATAGGCCAATTATTTTCCCAATTACAGAAATTCAGAAGGTAATAAACGAAAATGACAGTTTCTTAGTTG
TGCTTATATATTTACTCAAGAATAGCTAATTAACTCAGATTTTGACTGATTGCTTGAAAATTTTTGTGTCTCAATTTGTGAACTGTTTCTCTAAATATGCCAGTGTACCATTGTTGAAATACAATTAA
CCAGAAAATAGTCAACATTTGGAACCATAGGAGATCACAACACAGTTTGCATGGTTAAACAACTTAGTGTTGTTCATAAAATAAACTAATTATTCTTCCATAAATGTTAAAGACAATCAAAATACTAC
TTTCTATCATGTTTGGAAGCCAAGTTTTGCAATGGCTAAGTTGGTGAGAGGGAAAGCTTTTATAATGGCATTATAGGGAGATAGCTACCTGGTAGTCCGTGATTTGTATGAAGAGTCACCTAAGTAGA
TCAAGAAAGCCTCCAGATCACTGGACACTCTTCTTTGTTTCTGTGGAGATTCATATGCTGTTTCGAAAAAAAAAATCACTCTGTCAAAATATATTTTCTCTGCCTACCCTTCCTTTCTATATGTAGTT
CCCTTACAGAATTTAGTATTTATTGGGAATACTTACTACCACCTTGACCTCCCTATGTCTCTGTTATGCTGCAGAGACAATGTTCATTGACTCTGTAGACATTTTTATTAAAGAAAGCACTTTAATTG
CAATCTTTGTGGCCTATACAATTCACAAGAATTCTGTAATGTGACCCCTCCAAAAATTTTTGTGCCTATTGTTCTGATTGGTAGCAGAGCAATCAAAACTGCACCAAAATAAAAGATGAATGTCAGAA
ATGAAATACAATTTTGTTCTCCATGTTTTATTTTATTTTTTAATATTTAGTGCTGCTTTGGAAGTCAGATGCTTTCTGGAGGTGCTTTACTCAGATAATGGATACCAGTATATAATGCAATGTTTAAG
TGAAATATGTATGCTTGAATTAAATGCTATAATCTTAATATTTACATTAAAGTAAACAAAGAAAGGTTTGATTAGGAATAGAGCAGTTTCTTAGGTGCTTACAATAACTGTGTATATACTATGTTATT
ATCAGACTGGTGTCGTTTCATTTAAAAGCATTTGTTAATATTGAGAAAATAGAAAATATATCTTTATTGTTCTCTTTTATTCTTTCCTATATTTCTCTTACTGAAAATTGAATTCAAGGCTTTTAAAT
ATCAGGCAAGTGCTATGCTTCTGAGATACACTCTAGTTCACCATATAGTTTAAAGTTTAAATATTCAACTAATTGTCAAGATACTATCATTAAATATAAATTTAAAAAGATAAAGTAAAACCTAGGAG
GTTCTTTTTTATTTTAAACATGCAAGTTTTATTAGTTTACATATAGAACTCTATTAGATGAAATGATATAATTATAATTATCTTTTAAATTAGGAAACCCCACACTATAGTTAGAGATCAGTTTACAT
AGTTTAATTTTTTATGTTCAAAGCAATAACACTGTTGTAAGATGCTGGTAGAAAATGCTTTATTTGAGGATATGGATAATAATTGTCTGGTTCTGATTAGTTGCTTATTGTTTCTGTTGTAATTATAA
GTTCTATGACAATTGTATTTTGAGCATTGTTTCCAGTTTTATTTTCCATTATCAGAGACTGAATTTGTAGGCATAAAGCAGCTCTTATCCCTCAATGTACTATAATCTATTGTTCTCAATGAATAAAA
CATAGTTCTCAATGA

hide sequence

RefSeq Acc Id:

XM_006255031 ⟹ XP_006255093

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	84,723,330 - 84,819,836 (+)	NCBI
mRatBN7.2	18	82,449,958 - 82,545,107 (+)	NCBI
Rnor_6.0	18	86,299,395 - 86,394,772 (+)	NCBI
Rnor_5.0	18	85,337,942 - 85,433,295 (+)	NCBI

Sequence:

show sequence

CAGTACAGATGAAGCTGACTGCTCTTTCCTGTTTGTTTCTCAGCAAACTATCCCAAAGAATCCT
CAGCATTTGCCTAGGTCTTGCACTTGTATTCCTGTAATGTACTTGCAAGAATACATTTCCTAGAAACCTTAAGAGCATCACCACAACAACGGTGAAGAAAAGAAGGAGAAGGAAAGGGCAGTGGCGAA
GGCAGCATGGACACAGAGACCTAGGCCCTGGGCAATGTGGAAGGCAGAGAAAAAGAAGAAGCTGATAACATCTGAGAGGAAGGAAATAGCTCTTCATGCTGAGTTGTGAATATAACATCACACACACA
TTTTTTTTTAAACAGTCCAACCTCCTGAACCGTTTCCAGAGATGGCTTATCTTACTTGGCTTTTGGCTATTCTTCATGTGCACAAAGCGCTGTGTGAAGAGACATTGTGGGACACAACTGTTCGTCTT
TCTGAGACTATGACTTTGGAATGTGTATATCCATTGACGGATAACTTAACCCAGGCGGAGTGGACCAAGGACACTGGCACAAAGAAAGTGAACATAGCTGTTTACCACCCTAACCATAATATGCATAT
AGATCCTAACTACCTCCATAGAGTGCACTTTCAAAATGCAACAGTGGGGTTCCGCAACATGAGCCTTTCCTTTTACAATGCCTCTGAAGCAGACATCGGCATCTACACCTGCTTGTTTCATGCTTTCC
CACGTGGATCTTGGGAAAAGAAGATAAAAGTTGTCCAGTCAGATAGTTTTGAGACAACAGCACCCTTGGATAGCTACCTGTCTGCAGAACCTGGACAAAATGTCACACTCAGTTGCCAGCTTGAAAGG
ACTTGGCTAGTGCAACTAGTCATATGGGAAAAAGTCCAGCCCCATCAGGTAGACATCTTAGCTTCCTGTAACCTATCTCAAGGGACAAGATACACTTCAAAGTACCTAAGACAAACATGGAGCGACTG
TAGCCAGGAGAGCATGAAGAGTGCTCTCATTATACCCTATGCCATGGCTGCTGACTCAGGACTTTACAGATGCCGCTCTGAGGCCAGTACGGGAACAAACAAAACCTGTGTCATAAGGCTGATCATAA
CTGATGGTGGAACCAATAACCACTTTATCCTTCTCATTGTCGGAGGGCTAGCCTCACTGCTACTTGTCATCCTAATTACCATCATTATTATCTTATTCAACAGGAAGAGAAGGAGACAGGTGAGAACT
CCGCTTAAAGAGCTCAGAGATAAACAGAGTAAGGTAGCCACCAACTGCAGAAGTCCAACTTCTCCCATTCAGACTACAGATGATGAAAAAGAGGACATTTATGTTAACTATCCAACTTTCTCTCGGAG
ACCAAAACCAAGATTCTAAGCCGCTCTTTTGCCTGAGCACATTAGTAATGACTTCTATGGCATGGATTTTTACCCATGTCCTCCTCACCACCAGGATCTACATTGATTAAAAAGTTGATTGGATTTGT
TTTATCTCATATATAGAAGTACTTTATGACCTGGGAATATTCTTAACAGAGATGGATTTGAAAACCCAAATCTAATTAACCGTTCAAGGAACAGTTCAAGGAACCATCTTCCATTATATAACAGAGTA
ATCTAGAGAGGACTAAGTACCACGTGGCTTTCTTGCTCTACTTGAAATCAGCTGTGAACATAAGTTTATTTCTGGATGCTTCCTACAGTGTTGGTTCTGCTTATATACTACTGGTCCAACTCTCGTAC
TGCTTCTCTCAGATGCTCCCATGAGTATTGCCAAGGACACTTGGTAGAAAGTTTACTGGTTAAACACAGGAAACAAAGTTTATTATTCACTCACTAGCAAGAAGGTAGCATTACCACAAAAGATTAGA
TGACCTAAATTAGCTGTGGGTTCAAGACCAGGACAAAAGGGTTACTTGGGAATTCTGAGTATTGCTAAAAAGGCTGAAAGGGACCTAGAAGTTGAGTTATTTTTAACAAACTTTAACTTCAAAGGCAT
TGCTTATTAACTAGATAACAAATGAATGTACTGTAGTATCAGCATAATTCAAAAGAATACATGCCAAGGAATGCCGAGAGCAGAGATAATTGTGTAACTATTTCTTCCCTTTCTGGTTTCAAATAAAT
TCATTTCTAATTCTATAGAGAAGTCTTGCTACCCATTCAGGACTGGTCTTCTATACAGTGAGATGGTCCAATTAGAAATAATTCTTTTAATAATGCTTTTTCTACTTTCGAGAGTTATTTTAATATGT
AAACTTGTGAGTTTAAAATCTTCAAAATGAGCACATGAAAAGAGATTGATGGTTTTAAGTAGTAGAATACAGTAATGTAGGAATCTGAGAGCAGAGAGTTTGGGAGGGGGTGAAGAGGAAAAGACATC
ACCAAATAATGATATATGAGAGAAAATCTACACTTCAGAGTTTGATCAAGGCCATATCTCCCAATTTGGCTGGCACTGAGATAATGCACCTGATGTCTCCATTTTAGAAAAAAAATGAGTATTTGTGG
AATTAAATAAAACTCTAGTTATCTCAAAACTATGGTAATCATTATCAAATAGAATGATATTTAGTATCTAAAAGACCCATTTCTTATCTGTAAAAAATTTAAATGATCATAATCTTTAAATATTCATT
GTGGAAAACTTCGATTAAGTTTGTGGTGTGAAAATTTTGTTACAAACTTAAGTGAAAACAATCCAAATGCTAATGCGGTTACATAGATTCTAAAATGCAATTCATAGTTTTAAGATAATTAGTAGATA
CTTCATATTTTAACCTTAGATACCATGCATGATAAATAGGCCAATTATTTTCCCAATTACAGAAATTCAGAAGGTAATAAACGAAAATGACAGTTTCTTAGTTGTGCTTATATATTTACTCAAGAATA
GCTAATTAACTCAGATTTTGACTGATTGCTTGAAAATTTTTGTGTCTCAATTTGTGAACTGTTTCTCTAAATATGCCAGTGTACCATTGTTGAAATACAATTAACCAGAAAATAGTCAACATTTGGAA
CCATAGGAGATCACAACACAGTTTGCATGGTTAAACAACTTAGTGTTGTTCATAAAATAAACTAATTATTCTTCCATAAATGTTAAAGACAATCAAAATACTACTTTCTATCATGTTTGGAAGCCAAG
TTTTGCAATGGCTAAGTTGGTGAGAGGGAAAGCTTTTATAATGGCATTATAGGGAGATAGCTACCTGGTAGTCCGTGATTTGTATGAAGAGTCACCTAAGTAGATCAAGAAAGCCTCCAGATCACTGG
ACACTCTTCTTTGTTTCTGTGGAGATTCATATGCTGTTTCGAAAAAAAAAATCACTCTGTCAAAATATATTTTCTCTGCCTACCCTTCCTTTCTATATGTAGTTCCCTTACAGAATTTAGTATTTATT
GGGAATACTTACTACCACCTTGACCTCCCTATGTCTCTGTTATGCTGCAGAGACAATGTTCATTGACTCTGTAGACATTTTTATTAAAGAAAGCACTTTAATTGCAATCTTTGTGGCCTATACAATTC
ACAAGAATTCTGTAATGTGACCCCTCCAAAAATTTTTGTGCCTATTGTTCTGATTGGTAGCAGAGCAATCAAAACTGCACCAAAATAAAAGATGAATGTCAGAAATGAAATACAATTTTGTTCTCCAT
GTTTTATTTTATTTTTTAATATTTAGTGCTGCTTTGGAAGTCAGATGCTTTCTGGAGGTGCTTTACTCAGATAATGGATACCAGTATATAATGCAATGTTTAAGTGAAATATGTATGCTTGAATTAAA
TGCTATAATCTTAATATTTACATTAAAGTAAACAAAGAAAGGTTTGATTAGGAATAGAGCAGTTTCTTAGGTGCTTACAATAACTGTGTATATACTATGTTATTATCAGACTGGTGTCGTTTCATTTA
AAAGCATTTGTTAATATTGAGAAAATAGAAAATATATCTTTATTGTTCTCTTTTATTCTTTCCTATATTTCTCTTACTGAAAATTGAATTCAAGGCTTTTAAATATCAGGCAAGTGCTATGCTTCTGA
GATACACTCTAGTTCACCATATAGTTTAAAGTTTAAATATTCAACTAATTGTCAAGATACTATCATTAAATATAAATTTAAAAAGATAAAGTAAAACCTAGGAGGTTCTTTTTTATTTTAAACATGCA
AGTTTTATTAGTTTACATATAGAACTCTATTAGATGAAATGATATAATTATAATTATCTTTTAAATTAGGAAACCCCACACTATAGTTAGAGATCAGTTTACATAGTTTAATTTTTTATGTTCAAAGC
AATAACACTGTTGTAAGATGCTGGTAGAAAATGCTTTATTTGAGGATATGGATAATAATTGTCTGGTTCTGATTAGTTGCTTATTGTTTCTGTTGTAATTATAAGTTCTATGACAATTGTATTTTGAG
CATTGTTTCCAGTTTTATTTTCCATTATCAGAGACTGAATTTGTAGGCATAAAGCAGCTCTTATCCCTCAATGTACTATAATCTATTGTTCTCAATGAATAAAACATAGTTCTCAATGA

hide sequence

RefSeq Acc Id:

XM_039096758 ⟹ XP_038952686

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	84,731,649 - 84,819,836 (+)	NCBI
mRatBN7.2	18	82,456,291 - 82,545,107 (+)	NCBI

RefSeq Acc Id:

XM_039096759 ⟹ XP_038952687

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	84,723,330 - 84,819,836 (+)	NCBI
mRatBN7.2	18	82,449,958 - 82,545,107 (+)	NCBI

RefSeq Acc Id:

XM_063277286 ⟹ XP_063133356

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	84,731,649 - 84,819,836 (+)	NCBI


Protein RefSeqs	NP_001100840	(Get FASTA)	NCBI Sequence Viewer
	XP_006255090	(Get FASTA)	NCBI Sequence Viewer
	XP_006255093	(Get FASTA)	NCBI Sequence Viewer
	XP_038952686	(Get FASTA)	NCBI Sequence Viewer
	XP_038952687	(Get FASTA)	NCBI Sequence Viewer
	XP_063133356	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL75159	(Get FASTA)	NCBI Sequence Viewer
	EDL75160	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000054956
	ENSRNOP00000054956.2
	ENSRNOP00000111825

RefSeq Acc Id:	NP_001100840 ⟸ NM_001107370
- Peptide Label:	precursor
- UniProtKB:	D3ZS97 (UniProtKB/TrEMBL), A6K5P0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWKAVQPPEPFPEMAYLTWLLAILHVHKALCEETLWDTTVRLSETMTLECVYPLTDNLTQAEWTKDTGTKKVNIAVYHPNHNMHIDPNYLHRVHFQNATVGFRNMSLSFYNASEADIGIYTCLFHAFP RGSWEKKIKVVQSDSFETTAPLDSYLSAEPGQNVTLSCQLERTWLVQLVIWEKVQPHQVDILASCNLSQGTRYTSKYLRQTWSDCSQESMKSALIIPYAMAADSGLYRCRSEASTGTNKTCVIRLIIT DGGTNNHFILLIVGGLASLLLVILITIIIILFNRKRRRQVRTPLKELRDKQSKVATNCRSPTSPIQTTDDEKEDIYVNYPTFSRRPKPRF hide sequence

RefSeq Acc Id:	XP_006255090 ⟸ XM_006255028
- Peptide Label:	isoform X1
- UniProtKB:	A6K5P1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAYLTWLLAILHVHKALCEETLWDTTVRLSETMTLECVYPLTDNLTQAEWTKDTGTKKVNIAVYHPNHNMHIDPNYLHRVHFQNATVGFRNMSLSFYNASEADIGIYTCLFHAFPRGSWEKKIKVVQS DSFETTAPLDSYLSAEPGQNVTLSCQLERTWLVQLVIWEKVQPHQVDILASCNLSQGTRYTSKYLRQTWSDCSQESMKSALIIPYAMAADSGLYRCRSEASTGTNKTCVIRLIITDGGTNNHFILLIV GGLASLLLVILITIIIILFNRKRRRQVRTPLKELRDKQSKVATNCRSPTSPIQTTDDEKEDIYVNYPTFSRRPKPRF hide sequence

RefSeq Acc Id:	XP_006255093 ⟸ XM_006255031
- Peptide Label:	isoform X1
- UniProtKB:	A6K5P1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAYLTWLLAILHVHKALCEETLWDTTVRLSETMTLECVYPLTDNLTQAEWTKDTGTKKVNIAVYHPNHNMHIDPNYLHRVHFQNATVGFRNMSLSFYNASEADIGIYTCLFHAFPRGSWEKKIKVVQS DSFETTAPLDSYLSAEPGQNVTLSCQLERTWLVQLVIWEKVQPHQVDILASCNLSQGTRYTSKYLRQTWSDCSQESMKSALIIPYAMAADSGLYRCRSEASTGTNKTCVIRLIITDGGTNNHFILLIV GGLASLLLVILITIIIILFNRKRRRQVRTPLKELRDKQSKVATNCRSPTSPIQTTDDEKEDIYVNYPTFSRRPKPRF hide sequence

Ensembl Acc Id:

ENSRNOP00000054956 ⟸ ENSRNOT00000058152

Ensembl Acc Id:

ENSRNOP00000073108 ⟸ ENSRNOT00000091778

Protein Domains

Ig-like

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZS97-F1-model_v2	AlphaFold	D3ZS97	1-346	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

RGD ID:

13700909

Promoter ID:

EPDNEW_R11422

Type:

single initiation site

Name:

Cd226_1

Description:

CD226 molecule

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	18	86,307,693 - 86,307,753	EPDNEW

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-6690	BioCyc
Ensembl Genes	ENSRNOG00000038197	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000058152	ENTREZGENE
	ENSRNOT00000058152.4	UniProtKB/TrEMBL
	ENSRNOT00000172632	ENTREZGENE
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
InterPro	CD226	UniProtKB/TrEMBL
	Ig-like	UniProtKB/TrEMBL
	Ig-like_dom_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig_sub	UniProtKB/TrEMBL
	Ig_V-set	UniProtKB/TrEMBL
KEGG Report	rno:307199	UniProtKB/TrEMBL
NCBI Gene	307199	ENTREZGENE
PANTHER	CD226 ANTIGEN	UniProtKB/TrEMBL
	PTHR47011	UniProtKB/TrEMBL
Pfam	V-set	UniProtKB/TrEMBL
PhenoGen	Cd226	PhenoGen
PROSITE	IG_LIKE	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000038197	RatGTEx
SMART	SM00409	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48726	UniProtKB/TrEMBL
UniProt	A6K5P0	ENTREZGENE, UniProtKB/TrEMBL
	A6K5P1	ENTREZGENE, UniProtKB/TrEMBL
	D3ZS97	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-18	Cd226	CD226 antigen	Cd226_predicted	CD226 antigen (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-12	Cd226_predicted	CD226 antigen (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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