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Gene: Nkd2 (NKD inhibitor of WNT signaling pathway 2) Rattus norvegicus

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Symbol:

Nkd2

Name:

NKD inhibitor of WNT signaling pathway 2

RGD ID:

1311459

Description:

Predicted to enable several functions, including enzyme binding activity; growth factor binding activity; and myosin heavy chain binding activity. Predicted to be involved in several processes, including negative regulation of canonical Wnt signaling pathway; positive regulation of protein localization to plasma membrane; and positive regulation of proteolysis. Predicted to be located in basolateral plasma membrane; exocytic vesicle; and lateral plasma membrane. Predicted to be active in cytoplasm. Orthologous to human NKD2 (NKD inhibitor of WNT signaling pathway 2); PARTICIPATES IN Wnt signaling, canonical pathway; Wnt signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC308068; naked cuticle 2 homolog; naked cuticle 2 homolog (Drosophila); naked cuticle homolog 2; naked cuticle homolog 2 (Drosophila); NKD2, WNT signaling pathway inhibitor

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	31,268,856 - 31,299,390 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	31,272,519 - 31,299,387 (+)	Ensembl				GRCr8
mRatBN7.2	1	29,442,898 - 29,470,839 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	29,441,328 - 29,470,821 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	29,245,109 - 29,271,956 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	35,244,959 - 35,271,806 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	29,445,737 - 29,472,584 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	32,054,390 - 32,085,416 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	32,058,044 - 32,084,877 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	33,482,721 - 33,509,561 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	30,252,093 - 30,278,933 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	28,092,060 - 28,118,895 (+)	NCBI		Celera
RGSC_v3.1	1	30,252,483 - 30,285,229 (+)	NCBI
Cytogenetic Map	1	p11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

3-methylcholanthrene (ISO)

4,4'-sulfonyldiphenol (ISO)

5-aza-2'-deoxycytidine (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

acrylamide (ISO)

aflatoxin B1 (ISO)

aldehydo-D-glucose (ISO)

all-trans-retinoic acid (ISO)

alpha-Zearalanol (EXP)

amitrole (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butanal (ISO)

Butylbenzyl phthalate (ISO)

C.I. Natural Red 20 (ISO)

cadmium dichloride (ISO)

calcitriol (ISO)

camptothecin (ISO)

carbon nanotube (ISO)

carmustine (ISO)

chlordecone (ISO)

cisplatin (ISO)

copper atom (EXP)

copper(0) (EXP)

cyclosporin A (ISO)

D-glucose (ISO)

decabromodiphenyl ether (EXP)

dexamethasone (ISO)

diarsenic trioxide (ISO)

entinostat (ISO)

FR900359 (ISO)

fucoxanthin (ISO)

glucose (ISO)

indometacin (ISO)

leflunomide (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methotrexate (ISO)

methoxychlor (EXP)

N-methyl-4-phenylpyridinium (EXP,ISO)

O-methyleugenol (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

pentanal (ISO)

perfluorooctanoic acid (EXP)

phorbol 13-acetate 12-myristate (ISO)

propanal (ISO)

propiconazole (EXP)

quercetin (ISO)

rotenone (ISO)

Shikonin (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

Soman (EXP)

sulfadimethoxine (EXP)

sunitinib (ISO)

temozolomide (ISO)

tetrachloromethane (ISO)

titanium dioxide (ISO)

triadimefon (EXP)

urethane (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

Golgi vesicle fusion to target membrane (IEA,ISO)

negative regulation of canonical Wnt signaling pathway (IEA,ISO)

negative regulation of Wnt signaling pathway (IBA,IEA)

positive regulation of proteasomal ubiquitin-dependent protein catabolic process (IEA,ISO)

positive regulation of protein localization to plasma membrane (IEA,ISO)

positive regulation of protein processing (IEA,ISO)

protein localization to plasma membrane (IEA,ISO)

Wnt signaling pathway (IEA)

Cellular Component

basolateral plasma membrane (IEA,ISO)

cell periphery (IEA,ISO)

cytoplasm (IBA,IEA)

cytoplasmic vesicle (IEA,ISO)

exocytic vesicle (IEA,ISO)

lateral plasma membrane (IEA,ISO)

plasma membrane (IEA,ISO)

Molecular Function

ATPase binding (IEA,ISO)

calcium ion binding (IEA)

growth factor binding (IEA,ISO)

metal ion binding (IEA)

molecular adaptor activity (ISO)

myosin heavy chain binding (IEA,ISO)

protein binding (ISO)

ubiquitin protein ligase binding (IEA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

Wnt signaling pathway (IEA)

Wnt signaling, canonical pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
4.	PID Annotation Import Pipeline	Pipeline to import Pathway Interaction Database annotations from NCI into RGD
5.	GOA pipeline	RGD automated data pipeline
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:15064403	PMID:15687260	PMID:17553928	PMID:18504258	PMID:18757723	PMID:20177058	PMID:26084600	PMID:38371458

Genomics

Comparative Map Data

Nkd2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	31,268,856 - 31,299,390 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	31,272,519 - 31,299,387 (+)	Ensembl				GRCr8
mRatBN7.2	1	29,442,898 - 29,470,839 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	29,441,328 - 29,470,821 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	29,245,109 - 29,271,956 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	35,244,959 - 35,271,806 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	29,445,737 - 29,472,584 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	32,054,390 - 32,085,416 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	32,058,044 - 32,084,877 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	33,482,721 - 33,509,561 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	30,252,093 - 30,278,933 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	28,092,060 - 28,118,895 (+)	NCBI		Celera
RGSC_v3.1	1	30,252,483 - 30,285,229 (+)	NCBI
Cytogenetic Map	1	p11	NCBI

NKD2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	1,008,802 - 1,038,943 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	1,008,021 - 1,040,630 (+)	Ensembl			hg38	GRCh38
GRCh37	5	1,008,917 - 1,039,058 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	1,062,168 - 1,091,925 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	5	1,062,167 - 1,091,925	NCBI
Celera	5	1,048,097 - 1,076,601 (+)	NCBI		Celera
Cytogenetic Map	5	p15.33	NCBI
HuRef	5	993,646 - 1,021,595 (+)	NCBI		HuRef
CHM1_1	5	1,008,923 - 1,038,814 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	914,423 - 943,101 (+)	NCBI		T2T-CHM13v2.0

Nkd2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	73,966,653 - 73,995,750 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	73,966,653 - 73,995,750 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	13	73,818,534 - 73,847,631 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	73,818,534 - 73,847,631 (-)	Ensembl			mm10	GRCm38
MGSCv37	13	73,956,776 - 73,985,079 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	13	74,286,135 - 74,313,614 (-)	NCBI		MGSCv36	mm8
Celera	13	76,148,658 - 76,177,277 (-)	NCBI		Celera
Cytogenetic Map	13	C1	NCBI
cM Map	13	40.15	NCBI

Nkd2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955504	507,388 - 526,407 (+)	Ensembl
ChiLan1.0	NW_004955504	507,253 - 527,275 (+)	NCBI	ChiLan1.0	ChiLan1.0

NKD2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	1,255,972 - 1,282,115 (+)	NCBI		NHGRI_mPanPan1-v2
PanPan1.1 Ensembl	5	1,075,172 - 1,081,664 (+)	Ensembl			panPan2	panpan1.1

NKD2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	11,447,895 - 11,468,067 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	11,447,888 - 11,459,509 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	15,958,994 - 15,981,992 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	11,349,830 - 11,372,779 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	11,349,832 - 11,373,081 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	11,400,450 - 11,423,411 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	11,380,128 - 11,403,128 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	11,591,064 - 11,614,045 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Nkd2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	244,508,104 - 244,540,117 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936815	669,389 - 701,402 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936815	669,389 - 701,402 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NKD2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	79,400,997 - 79,419,759 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	16	79,400,323 - 79,419,779 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

NKD2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	4	857,938 - 884,840 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	4	858,809 - 884,758 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666054	35,414,495 - 35,441,704 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Nkd2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624751	495,561 - 507,756 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Nkd2
24 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	429
Count of miRNA genes:	235
Interacting mature miRNAs:	292
Transcripts:	ENSRNOT00000021898
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2313090	Bmd69	Bone mineral density QTL 69	4.4	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	1	5293229	34184556	Rat
631688	Hcas2	Hepatocarcinoma susceptibility QTL 2	3	0.0001	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	7746118	52746118	Rat
4889451	Eae29	Experimental allergic encephalomyelitis QTL 29	5.51		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	1	7746121	52746121	Rat
1357397	Bw41	Body weight QTL 41	4.19	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	1	29409279	74409279	Rat
70179	Xhs2	X-ray hypersensitivity QTL 2	3.2		intestine integrity trait (VT:0010554)	post-insult time to onset of moribundity (CMO:0001896)	1	1	43965634	Rat
1558642	Prcr2	Prostate cancer resistance QTL 2	4.3		prostate integrity trait (VT:0010571)	area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)	1	10379492	55379492	Rat
7421626	Bp360	Blood pressure QTL 360		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	6941022	51941022	Rat
2313070	Bss52	Bone structure and strength QTL 52	4.4	0.0001	body length (VT:0001256)	body length (CMO:0000013)	1	5293229	34184556	Rat
1357401	Bw43	Body weight QTL 43	3.75		body mass (VT:0001259)	body weight (CMO:0000012)	1	6909353	51909353	Rat
631494	Bp95	Blood pressure QTL 95	40	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	17315378	51816258	Rat
5684998	Bss101	Bone structure and strength QTL 101	3.6		tibia strength trait (VT:1000284)	tibia ultimate force (CMO:0001734)	1	6909353	51909353	Rat
5684999	Bss102	Bone structure and strength QTL 102	5.5	7e-07	tibia strength trait (VT:1000284)	tibia stiffness (CMO:0001735)	1	6909353	51909353	Rat
2302038	Pia31	Pristane induced arthritis QTL 31	5.5	0.001	blood autoantibody amount (VT:0003725)	serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)	1	12820494	57820494	Rat
2317755	Glom22	Glomerulus QTL 22	3.8		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	1	1	34184556	Rat
634353	Rends2	Renal damage susceptibility QTL 2		0.05	kidney blood vessel morphology trait (VT:0000530)	organ lesion measurement (CMO:0000677)	1	20656420	65656420	Rat
1578756	Iddm22	Insulin dependent diabetes mellitus QTL 22	2.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	20508326	65508326	Rat
631508	Sald1	Serum aldosterone level QTL 1	3.7		blood aldosterone amount (VT:0005346)	serum aldosterone level (CMO:0000487)	1	11684464	56684464	Rat
1331785	Rf27	Renal function QTL 27	4.643		urine sodium amount (VT:0006274)	urine sodium level (CMO:0000129)	1	30708375	87558729	Rat
2313053	Bss51	Bone structure and strength QTL 51	3.8	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	1	5293229	34184556	Rat

Markers in Region

RH131660

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	29,468,562 - 29,468,749 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	32,082,626 - 32,082,812	NCBI	Rnor6.0
Rnor_5.0	1	33,507,303 - 33,507,489	UniSTS	Rnor5.0
RGSC_v3.4	1	30,276,675 - 30,276,861	UniSTS	RGSC3.4
Celera	1	28,116,637 - 28,116,823	UniSTS
Cytogenetic Map	1	p11	UniSTS

BE120631

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	29,465,623 - 29,465,773 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	32,079,687 - 32,079,836	NCBI	Rnor6.0
Rnor_5.0	1	33,504,364 - 33,504,513	UniSTS	Rnor5.0
RGSC_v3.4	1	30,273,736 - 30,273,885	UniSTS	RGSC3.4
Celera	1	28,113,698 - 28,113,847	UniSTS
Cytogenetic Map	1	p11	UniSTS

RH144358

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	29,443,748 - 29,443,919 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	32,057,813 - 32,057,983	NCBI	Rnor6.0
Rnor_5.0	1	33,482,490 - 33,482,660	UniSTS	Rnor5.0
RGSC_v3.4	1	30,251,862 - 30,252,032	UniSTS	RGSC3.4
Celera	1	28,091,829 - 28,091,999	UniSTS
Cytogenetic Map	1	p11	UniSTS

AU048943

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	29,449,300 - 29,449,432 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	32,063,365 - 32,063,496	NCBI	Rnor6.0
Rnor_5.0	1	33,488,042 - 33,488,173	UniSTS	Rnor5.0
RGSC_v3.4	1	30,257,414 - 30,257,545	UniSTS	RGSC3.4
Celera	1	28,097,381 - 28,097,512	UniSTS
Cytogenetic Map	1	p11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	162	91	90	59	90	59	6	354	190	11	141	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008758692	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589089	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589090	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288366	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288369	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000021898 ⟹ ENSRNOP00000021898

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	31,272,519 - 31,299,387 (+)	Ensembl
mRatBN7.2 Ensembl	1	29,443,980 - 29,470,821 (+)	Ensembl
Rnor_6.0 Ensembl	1	32,058,044 - 32,084,877 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000118428 ⟹ ENSRNOP00000086365

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	31,273,128 - 31,299,387 (+)	Ensembl
mRatBN7.2 Ensembl	1	29,457,842 - 29,470,821 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119209 ⟹ ENSRNOP00000086125

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	29,441,328 - 29,470,821 (+)	Ensembl

RefSeq Acc Id:

NM_001107454 ⟹ NP_001100924

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	31,272,532 - 31,299,372 (+)	NCBI
mRatBN7.2	1	29,443,980 - 29,470,821 (+)	NCBI
Rnor_6.0	1	32,058,044 - 32,084,884 (+)	NCBI
Rnor_5.0	1	33,482,721 - 33,509,561 (+)	NCBI
RGSC_v3.4	1	30,252,093 - 30,278,933 (+)	RGD
Celera	1	28,092,060 - 28,118,895 (+)	RGD

Sequence:

show sequence

CATAGGGAGGCCGGCCGCTGCCCGCGCCGGTGTCTCCGGTTGCCGGGCCAAGCCTCGCCCGACT
GCCGGGCCCCGGATCCAGGCTCCACAAGTCTCTCTCGGCGCGCGGTTCACGTGCCCCAGGCTCG
AACCTCGGACGTGCGCCTGGGAGCTCAGCCGGAGGGTGGGTCCGGGTCCAGCGGCGACATGGGG
AAATTTCAGTCCAAGCACGCCTGCAAGAGGAGAGAGAGTCCCGAAGGGGACAGCTTCGTGGTGT
CGGCGTACGCGAGCGGTCGCAAAGGAGCGGAAGAGACCGACCGGCGCGCGGGCAGCGGTGTGGA
ACATCGCGCACGGGACAAGCAGGAGCTGCCCAATGGAGACCCTAAGGAAGGGCCTTTCTGGGAA
GACAAGGGTTCCCTAGAAGTTGTGCTGCCCCCTGAGAAGTCTGAGGGCCATGAGGGCCAGCTCT
TCAGCGTAGATGATGGGGAGAAGGCAGCAAACCGAGAGGGTCCACTAAGACTCAGCAAGAAGCA
CTTGAACATCGACGCACTCCAGTGTGATGTCTCAGTGGAAGAGGACAACCGTCAAGAGTGGACG
TTCACGCTGTATGACTTTGACAACAGTGGGAAAGTCACCAGAGAGGACATGTCCAGCCTGATGC
ACACCATCTATGAGGTCGTCGACGCCTCTGTCAATCATTCCTCGGGGAGCAGCAAGACCCTCCG
AGTGAAGCTAACTGTCAGCCCTGAACCCTCCAGCAAGAAGGAATGGCTTCCCCCTGGCCAAGAG
CGGGAGCCCACTCGTGGCAGAACAGAGAGTGAGCTCCCAGATGACCCACGAGTGGCCGACAGAA
GGCTGTCTGCCTATAGCAGGAAGCCCAACACAGATCCCCAGCCCTGTCCTGTGCGAGTGCCCTA
CTGTGTGGATGAGAACACAGAGCGAAGAAACCACTACCTAGACCTTGCTGGCATTGAGAACTAC
ACATCTAAGTTTGGTCCTGGGTCACCACCTGAGCAGGCCAGGCAAGAACATCATGGCAGGGCCA
CACACATTCCAAGCAGGTCCCGGTCTCAGGAGTCGGACGCCCATGCTATACACCACCGCAGGTC
TCAGGTCCTGGCTGAGCATATTGTGCCAGCTAATGAGCCTGCTCCTCGGGCCCTGGCTGCACAG
CCCCGACTCAAGGGGCAGGAGAAGCAGTTCCTCAGGTCTCCCAAGGGTCCGGGAAAACCTCTTG
GGGCACCAAGCGGCAGCAAGCCAGGGAAATCGCTCAGCCATTGCCTGCAGGCTGTGCCGCTGTC
CCAGGGTGCTCAGGACGGCCACCACCTTCCTCAACCCCCACCGCAGCCTCCGCCACAGCCCTAT
GGTCACAAGCGGTACCGGCAGAAAAGCAGAGAAGGCCACTCACCACTTAAGGGGCACGGCCAGC
CTACCATGGTGGAGCATGAAGTGGTCCGGGACCTTCCTCCCATGCTGGGGCCTGAGGGCTACGT
GGTGCCTATGATCCAGAGGCATGAACACCACCATCACCATGAACACCACCACCATCACCACCAC
CACCACTTCCACCCAAACGCCTCCTAGCGCCCAAACAAGCACTCCGCCCAAATGCCCTTGGGGA
CATAGACCAGATGCTGGCAGGTGCCCGGTAGTCTAGCGTCCCCTGGCCCCAGGGAGATGACACC
AGCCTGGATATTCGTGGACAAAGCTACCTTTCTCCATGCCGTTTGGATGCCAGTGCATTTGATG
CAGCTGATGATTACAGTAAAATGTGCTCCCGTGTGGTCCAGAAAGCCCATACGAGTACACAAAA
GCATGTGCTCCCACTTTTACTGCAGTGTCGCCGTGGGACGTTGGAAGGGCTGTGCCTAGGCATT
CTTTGTATCCGCATGGTCCTTTGACCTTTGGGTGCCTAAATGGAAAAGGCAATGCTTTTTGTGA
AGTTCAGACATTGGAAAGTCTGAGGGCTGGGATTGGGAAGTGCTTCTTAAGTGTACCCTGTTAA
ACGAGGCAGAACAAAGAAGCCAGATTATCAGCAACCGTGGAGGGGGCGTGGCTGAGCAGAGGGG
CGTGGCTGAGCAGAGGGGCGTGGCTGAGCAGAGGGGCGTGGCTGAGCAGAGGGGCGTGGCTGAG
CAGAGGGGCGTGGCTGAGCAGAGGGGCGTGGCTGAGCAGAGGGGCAGGGTGGTGATGTCCAGTG
GCAGCGTGAGGCTTGGTGTCCAGAGCTCCTAGCATCCTAGGTAGATGTGGATAAGACCCAGACA
GGTTGGGGTGGGTGGATCAGGTACTATGCTGGAGGTCCCCAAACAGGCTGTGCATAGCTAAGTG
ACACTTAGATGTCCCTCCATAAAGGCTGCAAGGGTGTGGAGACTTCGACAAGCCATGATCCTTG
TGGTCCCACCAGCAGGCTACAGCGAGGGGACCTCTTTGCCTTGTGAGTTTGTGCAGGTGGCATT
ACGCCTTCCTGACATAATAAAAGATGGCGCGTTCTGTAACATGGCATATCCTTGTATTAAAACA
CTTTCTGAGCGCTGCGGTCAGTCTACCGACACACCGCAGCTACAGGTGAAGGTGGCAGGTCCTT
GTGGAGGGTAAGTGCTGTAGGACCATTTTGACTTATGCTGGTCACGCACATGACTCCATAGTAA
TACTACTCACTAAGCGATTCTCAGACTAAGAAAAATCAGCACTCTAAACCCGGAGCTCAGCTCA
TGTTAACAAGGAACACCAAGCCCCACGTGGACTCCGTGGGCTACAGCTTATGCAGGCTGTTGGG
AAGCAACACAACCTTGTGCTTATCCCCTCTCCCTAAAACCCTGTGCCTATTCTAAGGAGTTACT
GAAGATCTGAGTGTGATGGTTCTTGGGACCTGGCTGCACATGTGTAGGGAGACCTGGGGATCAA
CCCCCTGTAGGCTGTTGCTAGTCACTTCAGCTAGAGATGCTCATGAAAACCAAAACGTGCCACC
CTTTCCTACATGACTAAAGCGCTCACATCATGGACGTCGAGATGGCACATTCATAAGGTCCCAC
CACCCACGCCACAGCAGAGGGACTGCACAGGAGGTCAGCGTGGACTCCCAGTTTGCTTCTCAAT
GTGCAGCATTCTTACACTGGGTTTGTAAGACGTCCTTTCAGGAAGAGATGATGATGATAAGAGC
ACTGGTTGCTCTTCTGAGGACCTGGGCTCAATTTCCAGCGCCCCACGTGGCAGTTCACGCCTGT
CTGTAACCCCAGCTCCAGGGCTTCGGGCACCCTCACACAGACATCCATGTGGATAAAACACCTA
TGAACATAAGCTAAAAAATAAAATAAAAAAGCCAGCGATGTCACATAGGATATCCCCAATGACA
TGGTTCAGCTGAGCACCGTGGGAAGCGGTGAGATTCAGCCAAGTCTGAGCCCTGGCTTCACATT
TTAAAAACTCAGGGCAGGCGGTAACCCTAACGCGCTTGTGGCAGGGGCCGAGCATCTGCCGCTG
TGTGAGTGTTAAGCAGAGGACTGTGCAACACTCCAGACAGCAGGATCCTCCATGCCGCGTGTCA
GACCTAAAGAGATGGGAAACAAACGCCCGGACCATTTAGTTGGGTGTGGCAGTGAATGCTTGCG
GGAGCCTACAGCAAGAGCTACAATTCAGGATCAGGCTGGGCTGTCTAGTGACACTGCCTCGCCT
GCCCCACACTGCTGGTGCTCTCCAGCATTTAGCCACTCTAGACATGGTCACCAGTGTCTGCACA
TGTCGTTTAGAAGAGTGGATCTGCTGAGGTGCAGAAACTTGGGTTGATTTAGAGACTCCAGGAC
TAAAAGTAAAGAGGTAAAACAGCCATGTTGCAAGTGGAACGAGAGGTAAGAAAGCCAGGGGTGG
GGATGCCTTGCCCACCCTGTGCTGTGCGCCAGGACGGTGTCTCCATGGCAGTTGGTAGCACCTG
GCAACAGGAGAGGGTGGCCATTGTGGGGAAAACAACCAACCTTGGCCGTGTATGTGGAGGTTGT
GGCTACTGTGTGTTCCTAGAACTGAACAGCCTGATCTACGTACATCCCCAAATAAA

hide sequence

RefSeq Acc Id:

XM_017589090 ⟹ XP_017444579

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	31,271,715 - 31,299,390 (+)	NCBI
mRatBN7.2	1	29,443,163 - 29,470,839 (+)	NCBI
Rnor_6.0	1	32,057,153 - 32,085,416 (+)	NCBI

Sequence:

show sequence

TAGGGTGTATGAACCACATCTCAAGAAAGCTGGGGAAGAAAATTATCCATTTGTTCTTGACCTG
TGTGTTCTAGATTTCCGCGGGTAAAGTAGGGAACCAAGGAGAGAAGTGTCACCAGAACAAGCTG
GAGCCCAAGGAAGAAGGAGAATGAGCTTTCTCCGAAGATAAGCAAGATAAACAAGGGTACCTTC
CTGTAGCCTTCTATCTCCGCACCCCACTCACCTCCAGCCCTCTCACGACGAGCCTGTGCCTAAC
ACCTCTCCCAGCCAAAGGAATCAAGATTCTGTAAGACCTAAGTAACTCTCTTCCAGGGTTCTCT
CTTCCAAAGGAGGGTTCTTAACACCGAATTTGGGATCTCAAGAAAAAGTTTGGTGAGGATGGAG
GGTGTTCCCCACAAGAAACCTCAGAGAGCCAGAAATCCTGAGTCCACTGCAGGCAGGCCCTGTC
TGCACTCACAGATGCCCTGTGCCAGTCTGATCAGAGCAGGTTCAAAATTGCTTGTCTGATAGAA
AAGTCCTAGGGTGAAGGAGACGCTAGGGTCCAGTGTGCTACGGTCCGCGGCCGCGGGGGGCGCT
GCGAGAACCGCTGTTAAAGCCCCGTCGCGGGCACGCGCGCTCATAGGGAGGCCGGCCGCTGCCC
GCGCCGGTGTCTCCGGTTGCCGGGCCAAGCCTCGCCCGACTGCCGGGCCCCGGATCCAGGCTCC
ACAAGTCTCTCTCGGCGCGCGGTTCACGTGCCCCAGGCTCGAACCTCGGACGTGCGCCTGGGAG
CTCAGCCGGAGGGTGGGTCCGGGTCCAGCGGCGACATGGGGAAATTTCAGTCCAAGCACGCCTG
CAAGAGGAGAGAGAGTCCCGAAGGGGACAGCTTCGTGGTGTCGGCGTACGCGAGCGGTCGCAAA
GGAGCGGAAGAGACCGACCGGCGCGCGGGCAGCGGTGTGGAACATCGCGCACGGGACAAGCAGG
AGCTGCCCAATGGAGACCCTAAGGAAGGGCCTTTCTGGGAAGACAAGGGTTCCCTAGAAGTTGT
GCTGCCCCCTGAGAAGTCTGAGGGCCATGAGGGCCAGCTCTTCAGCGTAGATGATGGGGAGAAG
GCAGCAAACCGAGAGGGTCCACTAAGACTCAGCAAGAAGCACTTGAACATCGACGCACTCCAGT
GTGATGTCTCAGTGGAAGAGGACAACCGTCAAGAGTGGACGTTCACGCTGTATGACTTTGACAA
CAGTGGGAAAGTCACCAGAGAGGACATGTCCAGCCTGATGCACACCATCTATGAGGTCGTCGAC
GCCTCTGTCAATCATTCCTCGGGGAGCAGCAAGACCCTCCGAGTGAAGCTAACTGTCAGCCCTG
AACCCTCCAGCAAGAAGGAATGGCTTCCCCCTGGCCAAGAGCGGGAGCCCACTCGTGGCAGAAC
AGAGAGTGAGCTCCCAGATGACCCACGAGTGGCCGACAGAAGGCTGTCTGCCTATAGCAGGAAG
CCCAACACAGATCCCCAGCCCTGTCCTGTGCGAGTGCCCTACTGTGTGGATGAGAACACAGAGC
GAAGAAACCACTACCTAGACCTTGCTGGCATTGAGAACTACACATCTAAGTTTGGTCCTGGGTC
ACCACCTGAGCAGGCCAGGCAAGAACATCATGGCAGGGCCACACACATTCCAAGCAGGTCCCGG
TCTCAGGAGTCGGACGCCCATGCTATACACCACCGCAGGTCTCAGGTCCTGGCTGAGCATATTG
TGCCAGCTAATGAGCCTGCTCCTCGGGCCCTGGCTGCACAGCCCCGACTCAAGGGGCAGGAGAA
GCAGTTCCTCAGGTCTCCCAAGGGTCCGGGAAAACCTCTTGGGGCACCAAGCGGCAGCAAGCCA
GGGAAATCGCTCAGCCATTGCCTGCAGGCTGTGCCGCTGTCCCAGGGTGCTCAGGACGGCCACC
ACCTTCCTCAACCCCCACCGCAGCCTCCGCCACAGCCCTATGGTCACAAGCGGTACCGGCAGAA
AAGCAGAGAAGGCCACTCACCACTTAAGGGGCACGGCCAGCCTACCATGGTGGAGCATGAAGTG
GTCCGGGACCTTCCTCCCATGCTGGGGCCTGAGGGCTACGTGGTGCCTATGATCCAGAGGCATG
AACACCACCATCACCATGAACACCACCACCATCACCACCACCACCACTTCCACCCAAACGCCTC
CTAGCGCCCAAACAAGCACTCCGCCCAAATGCCCTTGGGGACATAGACCAGATGCTGGCAGGTG
CCCGGTAGTCTAGCGTCCCCTGGCCCCAGGGAGATGACACCAGCCTGGATATTCGTGGACAAAG
CTACCTTTCTCCATGCCGTTTGGATGCCAGTGCATTTGATGCAGCTGATGATTACAGTAAAATG
TGCTCCCGTGTGGTCCAGAAAGCCCATACGAGTACACAAAAGCATGTGCTCCCACTTTTACTGC
AGTGTCGCCGTGGGACGTTGGAAGGGCTGTGCCTAGGCATTCTTTGTATCCGCATGGTCCTTTG
ACCTTTGGGTGCCTAAATGGAAAAGGCAATGCTTTTTGTGAAGTTCAGACATTGGAAAGTCTGA
GGGCTGGGATTGGGAAGTGCTTCTTAAGTGTACCCTGTTAAACGAGGCAGAACAAAGAAGCCAG
ATTATCAGCAACCGTGGAGGGGGCGTGGCTGAGCAGAGGGGCGTGGCTGAGCAGAGGGGCGTGG
CTGAGCAGAGGGGCGTGGCTGAGCAGAGGGGCGTGGCTGAGCAGAGGGGCGTGGCTGAGCAGAG
GGGCGTGGCTGAGCAGAGGGGCAGGGTGGTGATGTCCAGTGGCAGCGTGAGGCTTGGTGTCCAG
AGCTCCTAGCATCCTAGGTAGATGTGGATAAGACCCAGACAGGTTGGGGTGGGTGGATCAGGTA
CTATGCTGGAGGTCCCCAAACAGGCTGTGCATAGCTAAGTGACACTTAGATGTCCCTCCATAAA
GGCTGCAAGGGTGTGGAGACTTCGACAAGCCATGATCCTTGTGGTCCCACCAGCAGGCTACAGC
GAGGGGACCTCTTTGCCTTGTGAGTTTGTGCAGGTGGCATTACGCCTTCCTGACATAATAAAAG
ATGGCGCGTTCTGTAACATGGCATATCCTTGTATTAAAACACTTTCTGAGCGCTGCGGTCAGTC
TACCGACACACCGCAGCTACAGGTGAAGGTGGCAGGTCCTTGTGGAGGGTAAGTGCTGTAGGAC
CATTTTGACTTATGCTGGTCACGCACATGACTCCATAGTAATACTACTCACTAAGCGATTCTCA
GACTAAGAAAAATCAGCACTCTAAACCCGGAGCTCAGCTCATGTTAACAAGGAACACCAAGCCC
CACGTGGACTCCGTGGGCTACAGCTTATGCAGGCTGTTGGGAAGCAACACAACCTTGTGCTTAT
CCCCTCTCCCTAAAACCCTGTGCCTATTCTAAGGAGTTACTGAAGATCTGAGTGTGATGGTTCT
TGGGACCTGGCTGCACATGTGTAGGGAGACCTGGGGATCAACCCCCTGTAGGCTGTTGCTAGTC
ACTTCAGCTAGAGATGCTCATGAAAACCAAAACGTGCCACCCTTTCCTACATGACTAAAGCGCT
CACATCATGGACGTCGAGATGGCACATTCATAAGGTCCCACCACCCACGCCACAGCAGAGGGAC
TGCACAGGAGGTCAGCGTGGACTCCCAGTTTGCTTCTCAATGTGCAGCATTCTTACACTGGGTT
TGTAAGACGTCCTTTCAGGAAGAGATGATGATGATAAGAGCACTGGTTGCTCTTCTGAGGACCT
GGGCTCAATTTCCAGCGCCCCACGTGGCAGTTCACGCCTGTCTGTAACCCCAGCTCCAGGGCTT
CGGGCACCCTCACACAGACATCCATGTGGATAAAACACCTATGAACATAAGCTAAAAAATAAAA
TAAAAAAGCCAGCGATGTCACATAGGATATCCCCAATGACATGGTTCAGCTGAGCACCGTGGGA
AGCGGTGAGATTCAGCCAAGTCTGAGCCCTGGCTTCACATTTTAAAAACTCAGGGCAGGCGGTA
ACCCTAACGCGCTTGTGGCAGGGGCCGAGCATCTGCCGCTGTGTGAGTGTTAAGCAGAGGACTG
TGCAACACTCCAGACAGCAGGATCCTCCATGCCGCGTGTCAGACCTAAAGAGATGGGAAACAAA
CGCCCGGACCATTTAGTTGGGTGTGGCAGTGAATGCTTGCGGGAGCCTACAGCAAGAGCTACAA
TTCAGGATCAGGCTGGGCTGTCTAGTGACACTGCCTCGCCTGCCCCACACTGCTGGTGCTCTCC
AGCATTTAGCCACTCTAGACATGGTCACCAGTGTCTGCACATGTCGTTTAGAAGAGTGGATCTG
CTGAGGTGCAGAAACTTGGGTTGATTTAGAGACTCCAGGACTAAAAGTAAAGAGGTAAAACAGC
CATGTTGCAAGTGGAACGAGAGGTAAGAAAGCCAGGGGTGGGGATGCCTTGCCCACCCTGTGCT
GTGCGCCAGGACGGTGTCTCCATGGCAGTTGGTAGCACCTGGCAACAGGAGAGGGTGGCCATTG
TGGGGAAAACAACCAACCTTGGCCGTGTATGTGGAGGTTGTGGCTACTGTGTGTTCCTAGAACT
GAACAGCCTGATCTACGTACATCCCCAAATAAAAACCGCCAAGGGAACAAAGGTGTCGCCAAGA
TGCCCCTTTCTCAGCAGGTACCCCATTACTTTCAGGGTGAGCCTTTTGACTCCAGTTTCTATTT
AGCCTCTCAAGCAGGATCTGGAATCCTGATGCCCTGAGCTGGCTACGGCCTTCGTTCACACATG
GAGGTCTCCTAGCAAATTCAGTCAAGCATAGGGTCCTTGTTCTTCTAAACCTTCAGGGCAACTC
TGTCTCTTCAGGGCTTAGACACACTGCTCCTGCCTGCTACCCAGGCCAGTTGTGAGAGCAGAAG
ACAGTCTTCGCCACTCTCAGCTGGCTTCAGAGTGTCTTTGTCATTCACCAGACCATCCCCATGC
GCACTAACAGCCCCGGCCTACGCTGGGCAGCTCTTCAAGGGTATCTGCTGCTTGGCCCTTGTTC
TACCTTAGGTCACAAGACCACTCTGCTTTTCCCTTGGGCCTGTCCACAGCTGCATGTTTTCGTG
ACCTTGGATAAAGTGACCCGGGTGCTGTTCCCCAGCCCTGGGGTTCCTCGATA

hide sequence

RefSeq Acc Id:

XM_063288362 ⟹ XP_063144432

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	31,268,856 - 31,299,390 (+)	NCBI

RefSeq Acc Id:

XM_063288366 ⟹ XP_063144436

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	31,271,707 - 31,299,390 (+)	NCBI

RefSeq Acc Id:

XM_063288369 ⟹ XP_063144439

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	31,271,715 - 31,299,390 (+)	NCBI

RefSeq Acc Id:

XM_063288371 ⟹ XP_063144441

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	31,286,288 - 31,299,390 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100924	(Get FASTA)	NCBI Sequence Viewer
	XP_017444579	(Get FASTA)	NCBI Sequence Viewer
	XP_063144432	(Get FASTA)	NCBI Sequence Viewer
	XP_063144436	(Get FASTA)	NCBI Sequence Viewer
	XP_063144439	(Get FASTA)	NCBI Sequence Viewer
	XP_063144441	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL87667	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000021898
	ENSRNOP00000021898.5
	ENSRNOP00000086365
	ENSRNOP00000086365.1

RefSeq Acc Id:

NP_001100924 ⟸ NM_001107454

- UniProtKB:

D4A182 (UniProtKB/TrEMBL), A6JUW2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGKFQSKHACKRRESPEGDSFVVSAYASGRKGAEETDRRAGSGVEHRARDKQELPNGDPKEGPF
WEDKGSLEVVLPPEKSEGHEGQLFSVDDGEKAANREGPLRLSKKHLNIDALQCDVSVEEDNRQE
WTFTLYDFDNSGKVTREDMSSLMHTIYEVVDASVNHSSGSSKTLRVKLTVSPEPSSKKEWLPPG
QEREPTRGRTESELPDDPRVADRRLSAYSRKPNTDPQPCPVRVPYCVDENTERRNHYLDLAGIE
NYTSKFGPGSPPEQARQEHHGRATHIPSRSRSQESDAHAIHHRRSQVLAEHIVPANEPAPRALA
AQPRLKGQEKQFLRSPKGPGKPLGAPSGSKPGKSLSHCLQAVPLSQGAQDGHHLPQPPPQPPPQ
PYGHKRYRQKSREGHSPLKGHGQPTMVEHEVVRDLPPMLGPEGYVVPMIQRHEHHHHHEHHHHH
HHHHFHPNAS

hide sequence

RefSeq Acc Id:	XP_017444579 ⟸ XM_017589090
- Peptide Label:	isoform X2
- UniProtKB:	D4A182 (UniProtKB/TrEMBL), A6JUW2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGKFQSKHACKRRESPEGDSFVVSAYASGRKGAEETDRRAGSGVEHRARDKQELPNGDPKEGPF WEDKGSLEVVLPPEKSEGHEGQLFSVDDGEKAANREGPLRLSKKHLNIDALQCDVSVEEDNRQE WTFTLYDFDNSGKVTREDMSSLMHTIYEVVDASVNHSSGSSKTLRVKLTVSPEPSSKKEWLPPG QEREPTRGRTESELPDDPRVADRRLSAYSRKPNTDPQPCPVRVPYCVDENTERRNHYLDLAGIE NYTSKFGPGSPPEQARQEHHGRATHIPSRSRSQESDAHAIHHRRSQVLAEHIVPANEPAPRALA AQPRLKGQEKQFLRSPKGPGKPLGAPSGSKPGKSLSHCLQAVPLSQGAQDGHHLPQPPPQPPPQ PYGHKRYRQKSREGHSPLKGHGQPTMVEHEVVRDLPPMLGPEGYVVPMIQRHEHHHHHEHHHHH HHHHFHPNAS hide sequence

Ensembl Acc Id:

ENSRNOP00000021898 ⟸ ENSRNOT00000021898

Ensembl Acc Id:

ENSRNOP00000086365 ⟸ ENSRNOT00000118428

Ensembl Acc Id:

ENSRNOP00000086125 ⟸ ENSRNOT00000119209

RefSeq Acc Id:	XP_063144432 ⟸ XM_063288362
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063144436 ⟸ XM_063288366
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063144439 ⟸ XM_063288369
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6A1L5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144441 ⟸ XM_063288371
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6A619 (UniProtKB/TrEMBL)

Protein Domains

EF-hand

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A182-F1-model_v2	AlphaFold	D4A182	1-458	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13689564

Promoter ID:

EPDNEW_R89

Type:

multiple initiation site

Name:

Nkd2_1

Description:

naked cuticle homolog 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	1	32,058,045 - 32,058,105	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1311459	AgrOrtholog
BioCyc Gene	G2FUF-61931	BioCyc
Ensembl Genes	ENSRNOG00000016103	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000021898	ENTREZGENE
	ENSRNOT00000021898.7	UniProtKB/TrEMBL
	ENSRNOT00000118428	ENTREZGENE
	ENSRNOT00000118428.2	UniProtKB/TrEMBL
Gene3D-CATH	EF-hand	UniProtKB/TrEMBL
InterPro	EF-hand-like_dom	UniProtKB/TrEMBL
	EF_Hand_1_Ca_BS	UniProtKB/TrEMBL
	EF_hand_Ca-bd	UniProtKB/TrEMBL
	Nkd-like	UniProtKB/TrEMBL
KEGG Report	rno:308068	UniProtKB/TrEMBL
NCBI Gene	308068	ENTREZGENE
PANTHER	PROTEIN NAKED CUTICLE HOMOLOG 2	UniProtKB/TrEMBL
	PTHR22611	UniProtKB/TrEMBL
PhenoGen	Nkd2	PhenoGen
PROSITE	EF_HAND_1	UniProtKB/TrEMBL
	EF_HAND_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000016103	RatGTEx
Superfamily-SCOP	SSF47473	UniProtKB/TrEMBL
UniProt	A0A8I6A1L5	ENTREZGENE
	A0A8I6A619	ENTREZGENE, UniProtKB/TrEMBL
	A6JUW2	ENTREZGENE, UniProtKB/TrEMBL
	D4A182	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-04-04	Nkd2	NKD inhibitor of WNT signaling pathway 2	Nkd2	NKD2, WNT signaling pathway inhibitor	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2018-12-04	Nkd2	NKD2, WNT signaling pathway inhibitor	Nkd2	naked cuticle homolog 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2016-04-14	Nkd2	naked cuticle homolog 2	Nkd2	naked cuticle homolog 2 (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-10-20	Nkd2	naked cuticle homolog 2 (Drosophila)	Nkd2	naked cuticle 2 homolog (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Nkd2	naked cuticle 2 homolog (Drosophila)	Nkd2_predicted	naked cuticle 2 homolog (Drosophila) (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Nkd2_predicted	naked cuticle 2 homolog (Drosophila) (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Annotations - KEGG (archival)

Imported Annotations - PID (archival)

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Imported Annotations - KEGG (archival)

Imported Annotations - PID (archival)