Epb41l5 (erythrocyte membrane protein band 4.1 like 5) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Epb41l5 (erythrocyte membrane protein band 4.1 like 5) Rattus norvegicus
Analyze
Symbol: Epb41l5
Name: erythrocyte membrane protein band 4.1 like 5
RGD ID: 1311366
Description: Predicted to enable protein domain specific binding activity. Predicted to be involved in actomyosin structure organization and epithelial to mesenchymal transition. Predicted to act upstream of or within several processes, including chordate embryonic development; embryonic foregut morphogenesis; and mesoderm morphogenesis. Predicted to be located in focal adhesion and ruffle membrane. Predicted to be active in cytoskeleton. Orthologous to human EPB41L5 (erythrocyte membrane protein band 4.1 like 5); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: band 4.1-like protein 5; Epb4.1l5; erythrocyte membrane protein band 4.1-like 5; erythrocyte protein band 4.1-like 5; LOC304733; MGC109531
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81333,221,705 - 33,321,400 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1333,223,589 - 33,321,133 (-)EnsemblGRCr8
mRatBN7.21330,670,792 - 30,770,213 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1330,669,764 - 30,768,360 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1333,252,174 - 33,349,643 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01334,540,015 - 34,637,481 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01331,814,092 - 31,911,557 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01335,622,472 - 35,673,449 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1335,580,098 - 35,668,968 (-)Ensemblrn6Rnor6.0
Rnor_5.01340,736,725 - 40,787,937 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41332,373,377 - 32,426,745 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1330,609,949 - 30,662,208 (-)NCBICelera
RGSC_v3.11332,376,201 - 32,429,569 (-)NCBI
Cytogenetic Map13q11NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene  (ISO)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,4'-trichlorobiphenyl  (ISO)
2,4-dinitrotoluene  (EXP)
2,6-dinitrotoluene  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
acrylamide  (EXP)
all-trans-retinoic acid  (ISO)
amphetamine  (EXP)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
belinostat  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
Benzo[ghi]perylene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
butanal  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (ISO)
chloroprene  (ISO)
cisplatin  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumarin  (ISO)
coumestrol  (ISO)
diarsenic trioxide  (ISO)
dibenz[a,h]anthracene  (ISO)
dicrotophos  (ISO)
dorsomorphin  (ISO)
Enterolactone  (ISO)
entinostat  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
formaldehyde  (ISO)
geldanamycin  (ISO)
hydrogen peroxide  (ISO)
leflunomide  (EXP)
mercury dibromide  (ISO)
methapyrilene  (EXP)
N(4)-hydroxycytidine  (ISO)
N,N-diethyl-m-toluamide  (EXP)
N-ethyl-N-nitrosourea  (ISO)
nickel atom  (ISO)
Nivalenol  (ISO)
ochratoxin A  (ISO)
okadaic acid  (ISO)
ozone  (ISO)
panobinostat  (ISO)
paracetamol  (ISO)
paraquat  (EXP)
PCB138  (ISO)
permethrin  (EXP)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
poly(I:C)  (ISO)
potassium chromate  (ISO)
progesterone  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
temozolomide  (ISO)
tetrachloromethane  (EXP)
thimerosal  (ISO)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (ISO)
trichostatin A  (ISO)
urethane  (ISO)
valdecoxib  (EXP)
valproic acid  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:15755804   PMID:17507402   PMID:18794329   PMID:20103536   PMID:20678497  


Genomics

Comparative Map Data
Epb41l5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81333,221,705 - 33,321,400 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1333,223,589 - 33,321,133 (-)EnsemblGRCr8
mRatBN7.21330,670,792 - 30,770,213 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1330,669,764 - 30,768,360 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1333,252,174 - 33,349,643 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01334,540,015 - 34,637,481 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01331,814,092 - 31,911,557 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01335,622,472 - 35,673,449 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1335,580,098 - 35,668,968 (-)Ensemblrn6Rnor6.0
Rnor_5.01340,736,725 - 40,787,937 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41332,373,377 - 32,426,745 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1330,609,949 - 30,662,208 (-)NCBICelera
RGSC_v3.11332,376,201 - 32,429,569 (-)NCBI
Cytogenetic Map13q11NCBI
EPB41L5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382120,013,077 - 120,179,119 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2120,013,066 - 120,179,119 (+)Ensemblhg38GRCh38
GRCh372120,770,653 - 120,936,695 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362120,487,139 - 120,653,165 (+)NCBIBuild 36Build 36hg18NCBI36
Build 342120,486,898 - 120,652,924NCBI
Celera2114,097,494 - 114,263,547 (+)NCBICelera
Cytogenetic Map2q14.2NCBI
HuRef2113,095,033 - 113,261,073 (+)NCBIHuRef
CHM1_12120,775,048 - 120,941,099 (+)NCBICHM1_1
T2T-CHM13v2.02120,447,844 - 120,613,882 (+)NCBIT2T-CHM13v2.0
Epb41l5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391119,472,762 - 119,576,826 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1119,472,767 - 119,576,730 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381119,545,032 - 119,649,096 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1119,545,037 - 119,649,000 (-)Ensemblmm10GRCm38
MGSCv371121,441,610 - 121,545,577 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361121,375,677 - 121,476,482 (-)NCBIMGSCv36mm8
Celera1122,204,130 - 122,307,894 (-)NCBICelera
Cytogenetic Map1E2.3NCBI
cM Map152.32NCBI
Epb41l5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554599,641,884 - 9,784,173 (-)Ensembl
ChiLan1.0NW_0049554599,641,926 - 9,783,718 (-)NCBIChiLan1.0ChiLan1.0
EPB41L5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21322,011,547 - 22,180,955 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B22,026,559 - 22,195,925 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B6,945,289 - 7,111,595 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B120,521,139 - 120,687,209 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B120,521,145 - 120,687,209 (+)EnsemblpanPan2panpan1.1
EPB41L5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11929,916,994 - 30,063,243 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1929,921,636 - 30,063,216 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1930,241,913 - 30,319,328 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01931,292,585 - 31,438,670 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1931,295,033 - 31,438,663 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11930,047,561 - 30,124,750 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01930,217,313 - 30,294,837 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01931,402,865 - 31,477,654 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Epb41l5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530391,174,199 - 91,288,156 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493646950,329,409 - 50,443,626 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493646950,329,564 - 50,443,532 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EPB41L5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1531,159,223 - 31,295,893 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11531,159,214 - 31,295,891 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21536,469,281 - 36,530,372 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EPB41L5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11010,113,695 - 10,288,003 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1010,121,075 - 10,287,954 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366606112,405,079 - 12,570,511 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Epb41l5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473224,908,723 - 25,088,244 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473224,908,711 - 25,088,246 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Epb41l5
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11012,136,548 - 12,227,132 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Epb41l5
1167 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:244
Count of miRNA genes:161
Interacting mature miRNAs:187
Transcripts:ENSRNOT00000003428, ENSRNOT00000042862
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2317027Aia22Adjuvant induced arthritis QTL 222.29joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)13134785618Rat
9589141Insul28Insulin level QTL 2810.820.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)131186625456866254Rat
2317034Aia9Adjuvant induced arthritis QTL 94.62joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)131228551734884386Rat
61391Bp5Blood pressure QTL 55.6arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)132485392569853925Rat
1300163Cardf1Cardiac cell morphology QTL 14.18aorta morphology trait (VT:0000272)artery lesion measurement (CMO:0000975)131244842147969993Rat
2317040Aia21Adjuvant induced arthritis QTL 212.75joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)131238432057384320Rat
631645Bp121Blood pressure QTL 1213.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131746828262468282Rat
2303030Bp327Blood pressure QTL 327arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)13143736554Rat
2317046Aia8Adjuvant induced arthritis QTL 83.9700000286102295joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)131238432057384320Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13742179187286911Rat
2317044Aia23Adjuvant induced arthritis QTL 232.3joint integrity trait (VT:0010548)ankle joint diameter (CMO:0002148)131228551734884386Rat
61339Bp24Blood pressure QTL 240.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13600200847359539Rat
1331784Bp222Blood pressure QTL 2222.944arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)132433543255601132Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13600200888706694Rat
2302275Gluco37Glucose level QTL 373.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)131244842148744906Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1321120177109350286Rat
1558644Cm45Cardiac mass QTL 453.60.002heart mass (VT:0007028)heart wet weight (CMO:0000069)132624480871244808Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1311081740103588154Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13600200888706694Rat
12879471Bp398Blood pressure QTL 398arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)13308875548088755Rat
631672Iddm12Insulin dependent diabetes mellitus QTL 122.20.0032blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)13600200837088115Rat
6893338Cm76Cardiac mass QTL 7600.99heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)132624480871244808Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131103588154Rat
9589164Gluco66Glucose level QTL 666.670.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)131771133662711336Rat
738036Lnnr4Liver neoplastic nodule remodeling QTL 43.64liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)13134785618Rat
7411662Foco29Food consumption QTL 2920.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)131186625456866254Rat

Markers in Region
D13Hmgc37  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21330,737,550 - 30,737,765 (+)MAPPERmRatBN7.2
Rnor_6.01335,643,050 - 35,643,266NCBIRnor6.0
Rnor_5.01340,757,538 - 40,757,754UniSTSRnor5.0
RGSC_v3.41332,396,527 - 32,396,743UniSTSRGSC3.4
Celera1330,632,228 - 30,632,444UniSTS
Cytogenetic Map13q11UniSTS
RH127907  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21330,715,861 - 30,716,052 (+)MAPPERmRatBN7.2
Rnor_6.01335,622,682 - 35,622,872NCBIRnor6.0
Rnor_5.01340,736,935 - 40,737,125UniSTSRnor5.0
RGSC_v3.41332,373,587 - 32,373,777UniSTSRGSC3.4
Celera1330,610,159 - 30,610,349UniSTS
Cytogenetic Map13q11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 163 91 90 59 91 59 6 355 191 11 142 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001012023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001401160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC090012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000003428   ⟹   ENSRNOP00000003428
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1333,268,452 - 33,320,678 (-)Ensembl
mRatBN7.2 Ensembl1330,715,655 - 30,767,884 (-)Ensembl
Rnor_6.0 Ensembl1335,623,031 - 35,668,968 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000042862   ⟹   ENSRNOP00000045431
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1333,268,452 - 33,320,678 (-)Ensembl
mRatBN7.2 Ensembl1330,715,655 - 30,767,884 (-)Ensembl
Rnor_6.0 Ensembl1335,580,098 - 35,668,968 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000111356   ⟹   ENSRNOP00000089466
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1333,223,589 - 33,321,133 (-)Ensembl
mRatBN7.2 Ensembl1330,669,764 - 30,768,360 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000113950   ⟹   ENSRNOP00000096407
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1333,223,589 - 33,321,133 (-)Ensembl
mRatBN7.2 Ensembl1330,669,764 - 30,768,360 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000131496   ⟹   ENSRNOP00000106343
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1333,223,589 - 33,321,133 (-)Ensembl
RefSeq Acc Id: NM_001012023   ⟹   NP_001012023
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81333,268,449 - 33,320,678 (-)NCBI
mRatBN7.21330,715,652 - 30,767,884 (-)NCBI
Rnor_6.01335,622,472 - 35,673,449 (-)NCBI
Rnor_5.01340,736,725 - 40,787,937 (-)NCBI
RGSC_v3.41332,373,377 - 32,426,745 (-)RGD
Celera1330,609,949 - 30,662,208 (-)RGD
Sequence:
RefSeq Acc Id: NM_001401160   ⟹   NP_001388089
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81333,223,589 - 33,321,133 (-)NCBI
mRatBN7.21330,670,792 - 30,768,339 (-)NCBI
RefSeq Acc Id: XM_039090671   ⟹   XP_038946599
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81333,221,705 - 33,320,922 (-)NCBI
mRatBN7.21330,673,052 - 30,768,137 (-)NCBI
RefSeq Acc Id: XM_039090673   ⟹   XP_038946601
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81333,221,705 - 33,321,399 (-)NCBI
mRatBN7.21330,673,052 - 30,770,212 (-)NCBI
RefSeq Acc Id: XM_039090674   ⟹   XP_038946602
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81333,221,705 - 33,320,922 (-)NCBI
mRatBN7.21330,673,052 - 30,768,137 (-)NCBI
RefSeq Acc Id: XM_039090675   ⟹   XP_038946603
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81333,221,705 - 33,321,399 (-)NCBI
mRatBN7.21330,673,052 - 30,770,212 (-)NCBI
RefSeq Acc Id: XM_039090676   ⟹   XP_038946604
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81333,221,705 - 33,320,922 (-)NCBI
mRatBN7.21330,673,052 - 30,768,137 (-)NCBI
RefSeq Acc Id: XM_039090677   ⟹   XP_038946605
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81333,221,705 - 33,320,922 (-)NCBI
mRatBN7.21330,673,052 - 30,768,137 (-)NCBI
RefSeq Acc Id: XM_039090678   ⟹   XP_038946606
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81333,221,705 - 33,321,399 (-)NCBI
mRatBN7.21330,673,052 - 30,770,212 (-)NCBI
RefSeq Acc Id: XM_039090679   ⟹   XP_038946607
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81333,221,705 - 33,321,399 (-)NCBI
mRatBN7.21330,673,052 - 30,770,212 (-)NCBI
RefSeq Acc Id: XM_039090680   ⟹   XP_038946608
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81333,221,705 - 33,321,400 (-)NCBI
mRatBN7.21330,673,052 - 30,770,213 (-)NCBI
RefSeq Acc Id: XM_039090681   ⟹   XP_038946609
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81333,263,733 - 33,321,394 (-)NCBI
mRatBN7.21330,711,786 - 30,770,206 (-)NCBI
RefSeq Acc Id: XM_063272230   ⟹   XP_063128300
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81333,221,705 - 33,320,922 (-)NCBI
RefSeq Acc Id: XM_063272231   ⟹   XP_063128301
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81333,263,733 - 33,321,395 (-)NCBI
RefSeq Acc Id: XM_063272232   ⟹   XP_063128302
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81333,263,733 - 33,321,396 (-)NCBI
RefSeq Acc Id: XM_063272233   ⟹   XP_063128303
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81333,263,733 - 33,321,396 (-)NCBI
RefSeq Acc Id: XM_063272234   ⟹   XP_063128304
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81333,263,733 - 33,321,396 (-)NCBI
RefSeq Acc Id: XM_063272235   ⟹   XP_063128305
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81333,263,733 - 33,320,922 (-)NCBI
RefSeq Acc Id: XM_063272236   ⟹   XP_063128306
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81333,270,800 - 33,321,393 (-)NCBI
RefSeq Acc Id: NP_001012023   ⟸   NM_001012023
- Peptide Label: isoform 2
- UniProtKB: D3ZK45 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000045431   ⟸   ENSRNOT00000042862
Ensembl Acc Id: ENSRNOP00000003428   ⟸   ENSRNOT00000003428
RefSeq Acc Id: XP_038946608   ⟸   XM_039090680
- Peptide Label: isoform X2
- UniProtKB: Q5FVG2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038946601   ⟸   XM_039090673
- Peptide Label: isoform X1
- UniProtKB: Q5FVG2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038946607   ⟸   XM_039090679
- Peptide Label: isoform X1
- UniProtKB: Q5FVG2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038946606   ⟸   XM_039090678
- Peptide Label: isoform X1
- UniProtKB: Q5FVG2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038946603   ⟸   XM_039090675
- Peptide Label: isoform X1
- UniProtKB: Q5FVG2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038946599   ⟸   XM_039090671
- Peptide Label: isoform X1
- UniProtKB: Q5FVG2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038946604   ⟸   XM_039090676
- Peptide Label: isoform X1
- UniProtKB: Q5FVG2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038946605   ⟸   XM_039090677
- Peptide Label: isoform X1
- UniProtKB: Q5FVG2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038946602   ⟸   XM_039090674
- Peptide Label: isoform X1
- UniProtKB: Q5FVG2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038946609   ⟸   XM_039090681
- Peptide Label: isoform X3
- UniProtKB: D3ZK45 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000089466   ⟸   ENSRNOT00000111356
Ensembl Acc Id: ENSRNOP00000096407   ⟸   ENSRNOT00000113950
RefSeq Acc Id: NP_001388089   ⟸   NM_001401160
- Peptide Label: isoform 1
- UniProtKB: Q5FVG2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063128300   ⟸   XM_063272230
- Peptide Label: isoform X2
- UniProtKB: Q5FVG2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063128304   ⟸   XM_063272234
- Peptide Label: isoform X3
- UniProtKB: D3ZK45 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128303   ⟸   XM_063272233
- Peptide Label: isoform X3
- UniProtKB: D3ZK45 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128302   ⟸   XM_063272232
- Peptide Label: isoform X3
- UniProtKB: D3ZK45 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128301   ⟸   XM_063272231
- Peptide Label: isoform X3
- UniProtKB: D3ZK45 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128305   ⟸   XM_063272235
- Peptide Label: isoform X3
- UniProtKB: D3ZK45 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128306   ⟸   XM_063272236
- Peptide Label: isoform X4
- UniProtKB: D3ZK45 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000106343   ⟸   ENSRNOT00000131496
Protein Domains
FERM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5FVG2-F1-model_v2 AlphaFold Q5FVG2 1-731 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1311366 AgrOrtholog
BioCyc Gene G2FUF-18519 BioCyc
Ensembl Genes ENSRNOG00000002538 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000042862 ENTREZGENE
  ENSRNOT00000042862.6 UniProtKB/Swiss-Prot
  ENSRNOT00000111356.1 UniProtKB/Swiss-Prot
  ENSRNOT00000131496 ENTREZGENE
Gene3D-CATH 1.20.80.10 UniProtKB/Swiss-Prot
  2.30.29.30 UniProtKB/Swiss-Prot
  Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7324591 IMAGE-MGC_LOAD
InterPro Band_41_domain UniProtKB/Swiss-Prot
  Ez/rad/moesin-like UniProtKB/Swiss-Prot
  FERM-adjacent UniProtKB/Swiss-Prot
  FERM/acyl-CoA-bd_prot_sf UniProtKB/Swiss-Prot
  FERM_2 UniProtKB/Swiss-Prot
  FERM_central UniProtKB/Swiss-Prot
  FERM_CS UniProtKB/Swiss-Prot
  FERM_domain UniProtKB/Swiss-Prot
  FERM_N UniProtKB/Swiss-Prot
  FERM_PH-like_C UniProtKB/Swiss-Prot
  PH-like_dom_sf UniProtKB/Swiss-Prot
  Ubiquitin-like_domsf UniProtKB/Swiss-Prot
MGC_CLONE MGC:109531 IMAGE-MGC_LOAD
NCBI Gene 304733 ENTREZGENE
PANTHER 4.1 G PROTEIN UniProtKB/Swiss-Prot
  PTHR23280:SF15 UniProtKB/Swiss-Prot
Pfam FERM_C UniProtKB/Swiss-Prot
  FERM_M UniProtKB/Swiss-Prot
  FERM_N UniProtKB/Swiss-Prot
  PF08736 UniProtKB/Swiss-Prot
PhenoGen Epb41l5 PhenoGen
PRINTS BAND41 UniProtKB/Swiss-Prot
  ERMFAMILY UniProtKB/Swiss-Prot
PROSITE FERM_1 UniProtKB/Swiss-Prot
  FERM_2 UniProtKB/Swiss-Prot
  FERM_3 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000002538 RatGTEx
SMART B41 UniProtKB/Swiss-Prot
  FERM_C UniProtKB/Swiss-Prot
  SM01195 UniProtKB/Swiss-Prot
Superfamily-SCOP PH domain-like UniProtKB/Swiss-Prot
  SSF47031 UniProtKB/Swiss-Prot
  SSF54236 UniProtKB/Swiss-Prot
UniProt A0A8I6AQR4_RAT UniProtKB/TrEMBL
  A0ABK0LW63_RAT UniProtKB/TrEMBL
  D3ZK45 ENTREZGENE, UniProtKB/TrEMBL
  E41L5_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-18 Epb41l5  erythrocyte membrane protein band 4.1 like 5  Epb4.1l5  erythrocyte membrane protein band 4.1-like 5  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2014-08-04 Epb4.1l5  erythrocyte membrane protein band 4.1-like 5  Epb4.1l5  erythrocyte membrane protein band 4.1 like 5  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2013-08-01 Epb4.1l5  erythrocyte membrane protein band 4.1 like 5  Epb4.1l5  erythrocyte protein band 4.1-like 5  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Epb4.1l5  erythrocyte protein band 4.1-like 5  Epb4.1l5_predicted  erythrocyte protein band 4.1-like 5 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Epb4.1l5_predicted  erythrocyte protein band 4.1-like 5 (predicted)      Symbol and Name status set to approved 70820 APPROVED