Iqce (IQ motif containing E) - Rat Genome Database

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Gene: Iqce (IQ motif containing E) Rattus norvegicus
Analyze
Symbol: Iqce
Name: IQ motif containing E
RGD ID: 1311349
Description: Predicted to be involved in several processes, including positive regulation of transcription by RNA polymerase II; protein localization to motile cilium; and regulation of smoothened signaling pathway. Predicted to be located in ciliary membrane and cytoplasmic side of plasma membrane. Predicted to be part of plasma membrane protein complex. Orthologous to human IQCE (IQ motif containing E); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 3,3',5,5'-tetrabromobisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: IQ domain-containing protein E; LOC304318; RGD1311349; similar to RIKEN cDNA 1700028P05
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81219,057,060 - 19,096,626 (+)NCBIGRCr8
mRatBN7.21213,943,290 - 13,982,708 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1213,943,487 - 13,982,693 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01216,030,607 - 16,069,872 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1215,857,805 - 16,067,924 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01218,028,202 - 18,067,110 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41214,414,172 - 14,451,362 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11214,442,250 - 14,468,742 (+)NCBI
Celera1215,703,595 - 15,742,833 (+)NCBICelera
Cytogenetic Map12q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:18614015   PMID:24582806   PMID:28488682  


Genomics

Comparative Map Data
Iqce
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81219,057,060 - 19,096,626 (+)NCBIGRCr8
mRatBN7.21213,943,290 - 13,982,708 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1213,943,487 - 13,982,693 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01216,030,607 - 16,069,872 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1215,857,805 - 16,067,924 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01218,028,202 - 18,067,110 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41214,414,172 - 14,451,362 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11214,442,250 - 14,468,742 (+)NCBI
Celera1215,703,595 - 15,742,833 (+)NCBICelera
Cytogenetic Map12q11NCBI
IQCE
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3872,558,979 - 2,614,728 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl72,558,972 - 2,614,733 (+)EnsemblGRCh38hg38GRCh38
GRCh3772,598,613 - 2,654,362 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3672,565,158 - 2,620,894 (+)NCBINCBI36Build 36hg18NCBI36
Build 3472,371,872 - 2,423,779NCBI
Celera72,567,993 - 2,623,218 (+)NCBICelera
Cytogenetic Map7p22.3NCBI
HuRef72,517,599 - 2,572,724 (+)NCBIHuRef
CHM1_172,598,231 - 2,653,765 (+)NCBICHM1_1
T2T-CHM13v2.072,672,578 - 2,728,247 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v272,646,544 - 2,702,212 (+)NCBI
Iqce
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395140,648,308 - 140,688,158 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5140,647,582 - 140,688,133 (-)EnsemblGRCm39 Ensembl
GRCm385140,662,553 - 140,702,403 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5140,661,827 - 140,702,378 (-)EnsemblGRCm38mm10GRCm38
MGSCv375141,139,459 - 141,178,332 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365140,915,979 - 140,954,852 (-)NCBIMGSCv36mm8
Celera5137,723,918 - 137,762,791 (-)NCBICelera
Cytogenetic Map5G2NCBI
cM Map579.2NCBI
Iqce
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495546012,676,649 - 12,724,613 (+)NCBIChiLan1.0ChiLan1.0
IQCE
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v267,515,101 - 7,571,172 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1755,839,800 - 55,895,872 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v072,818,723 - 2,874,505 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.172,913,345 - 2,968,619 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl72,913,549 - 2,964,046 (+)Ensemblpanpan1.1panPan2
IQCE
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1614,538,693 - 14,579,095 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl614,532,181 - 14,577,435 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha615,995,640 - 16,041,843 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0614,659,001 - 14,705,205 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1614,462,989 - 14,509,190 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0614,391,420 - 14,437,616 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0614,677,263 - 14,723,464 (+)NCBIUU_Cfam_GSD_1.0
Iqce
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344142,661,793 - 142,711,886 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004936823340,959 - 389,593 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IQCE
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl31,861,204 - 1,903,035 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.131,861,487 - 1,903,107 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.232,124,748 - 2,168,376 (+)NCBISscrofa10.2Sscrofa10.2susScr3
IQCE
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12818,963,871 - 19,014,509 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2818,963,944 - 19,019,009 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660902,752,561 - 2,807,874 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Iqce
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474030,299,266 - 30,348,572 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Iqce
181 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:177
Count of miRNA genes:100
Interacting mature miRNAs:102
Transcripts:ENSRNOT00000001667, ENSRNOT00000051565
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12119611090Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
1549912Bp268Blood pressure QTL 268arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)101318273646669029Rat
2302060Pia37Pristane induced arthritis QTL 376.10.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)121319815746669029Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121281238546669029Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)12960327746669029Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12610757946669029Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)12852542328064601Rat
1581516Cm56Cardiac mass QTL 564.20.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)12129333307Rat
9590086Insglur6Insulin/glucose ratio QTL 618.970.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)12142110980Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12123297788Rat
1549902Bp269Blood pressure QTL 269arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121318273646669029Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)12719673046669029Rat
61404Bw120Body weight QTL 1205.1body mass (VT:0001259)body mass index (BMI) (CMO:0000105)121235161946669029Rat
1331786Kidm11Kidney mass QTL 113.571kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)121107382524234895Rat
1598855Bp294Blood pressure QTL 2943.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)12134851688Rat
1600391Edcs2Endometrial carcinoma susceptibility QTL23.50.01uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)12683319017870186Rat
2293699Bss49Bone structure and strength QTL 495.610.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)121047413746669029Rat
10755457Coatc14Coat color QTL 140.01759coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)12122591684Rat
1331761Bp218Blood pressure QTL 2182.973arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382545055165Rat
634351Apr5Acute phase response QTL 56.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)12144503507Rat
8694179Bw150Body weight QTL 1502.90.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
634350Apr4Acute phase response QTL 46orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)12117200546172005Rat
7411545Bw128Body weight QTL 1285.20.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
61416Pia4Pristane induced arthritis QTL 48.4joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)121363552330827399Rat
7204484Bp358Blood pressure QTL 3580.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121300829619212979Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)6556449546669029Rat
7387292Kidm42Kidney mass QTL 423.030.0004kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)12136247923Rat
61421Cia12Collagen induced arthritis QTL 124.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121363552335682913Rat
1300157Rf21Renal function QTL 214.4renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)12931821632103380Rat
737979Pia22Pristane induced arthritis QTL 2253.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12144465750Rat
2303569Gluco44Glucose level QTL 442blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121281238546669029Rat
7411586Foco5Food consumption QTL 55.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12142450532Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
2302042Pia38Pristane induced arthritis QTL 383.50.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)12144503507Rat
2300186Bmd59Bone mineral density QTL 597.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)121047413746669029Rat
7411595Foco9Food consumption QTL 940.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
2293086Iddm30Insulin dependent diabetes mellitus QTL 303.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)12844949028302290Rat
7411660Foco28Food consumption QTL 2810.90.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
1331755Bp219Blood pressure QTL 2193.041arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382528064557Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001432060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001432061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001432062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001432064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001432065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001432066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001432067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001432068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001432069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001432070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001432071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001432072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001432073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001432074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001432075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001432076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_001073653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006221262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006248962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017598488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017598489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017598490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017598491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017598492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017598493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017598494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039089960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039089961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_221965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC119536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH474012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000001667   ⟹   ENSRNOP00000001667
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1213,943,487 - 13,982,693 (+)Ensembl
Rnor_6.0 Ensembl1215,857,805 - 16,067,921 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000051565   ⟹   ENSRNOP00000040350
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1213,943,487 - 13,982,693 (+)Ensembl
Rnor_6.0 Ensembl1216,030,788 - 16,067,924 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000117335   ⟹   ENSRNOP00000094917
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1213,943,487 - 13,982,693 (+)Ensembl
RefSeq Acc Id: XM_006248962   ⟹   XP_006249024
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,057,060 - 19,096,626 (+)NCBI
mRatBN7.21213,943,296 - 13,982,708 (+)NCBI
Rnor_6.01216,030,607 - 16,069,872 (+)NCBI
Rnor_5.01218,028,202 - 18,067,110 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017598488   ⟹   XP_017453977
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,057,060 - 19,096,626 (+)NCBI
mRatBN7.21213,943,290 - 13,982,708 (+)NCBI
Rnor_6.01216,030,607 - 16,069,872 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017598489   ⟹   XP_017453978
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,057,060 - 19,096,626 (+)NCBI
mRatBN7.21213,943,293 - 13,982,708 (+)NCBI
Rnor_6.01216,030,607 - 16,069,872 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017598490   ⟹   XP_017453979
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,057,060 - 19,096,626 (+)NCBI
mRatBN7.21213,943,291 - 13,982,708 (+)NCBI
Rnor_6.01216,030,607 - 16,069,872 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017598491   ⟹   XP_017453980
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,057,060 - 19,096,626 (+)NCBI
mRatBN7.21213,943,305 - 13,982,708 (+)NCBI
Rnor_6.01216,030,609 - 16,069,872 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017598492   ⟹   XP_017453981
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,057,644 - 19,096,626 (+)NCBI
mRatBN7.21213,943,708 - 13,982,708 (+)NCBI
Rnor_6.01216,030,830 - 16,069,872 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017598493   ⟹   XP_017453982
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,065,784 - 19,096,626 (+)NCBI
mRatBN7.21213,951,865 - 13,982,708 (+)NCBI
Rnor_6.01216,038,927 - 16,069,872 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017598494   ⟹   XP_017453983
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,065,648 - 19,096,626 (+)NCBI
mRatBN7.21213,951,724 - 13,982,708 (+)NCBI
Rnor_6.01216,038,862 - 16,069,872 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039089960   ⟹   XP_038945888
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,057,060 - 19,096,626 (+)NCBI
mRatBN7.21213,943,574 - 13,980,752 (+)NCBI
RefSeq Acc Id: XM_039089961   ⟹   XP_038945889
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,057,060 - 19,090,248 (+)NCBI
mRatBN7.21213,943,292 - 13,976,322 (+)NCBI
RefSeq Acc Id: XM_063271863   ⟹   XP_063127933
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,057,060 - 19,096,626 (+)NCBI
RefSeq Acc Id: XM_063271864   ⟹   XP_063127934
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,057,060 - 19,096,626 (+)NCBI
RefSeq Acc Id: XM_063271865   ⟹   XP_063127935
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,057,060 - 19,096,626 (+)NCBI
RefSeq Acc Id: XM_063271866   ⟹   XP_063127936
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,057,060 - 19,096,626 (+)NCBI
RefSeq Acc Id: XM_063271867   ⟹   XP_063127937
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,057,060 - 19,096,626 (+)NCBI
RefSeq Acc Id: XM_063271868   ⟹   XP_063127938
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,065,786 - 19,096,626 (+)NCBI
RefSeq Acc Id: XM_063271869   ⟹   XP_063127939
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,065,786 - 19,096,626 (+)NCBI
RefSeq Acc Id: XM_063271870   ⟹   XP_063127940
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,057,060 - 19,090,248 (+)NCBI
RefSeq Acc Id: XM_063271871   ⟹   XP_063127941
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,065,786 - 19,096,626 (+)NCBI
RefSeq Acc Id: XM_063271872   ⟹   XP_063127942
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,065,781 - 19,090,248 (+)NCBI
RefSeq Acc Id: XM_221965   ⟹   XP_221965
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81219,057,060 - 19,096,626 (+)NCBI
mRatBN7.21213,943,299 - 13,982,708 (+)NCBI
Rnor_6.01216,030,607 - 16,067,924 (+)NCBI
Rnor_5.01218,028,202 - 18,067,110 (+)NCBI
RGSC_v3.41214,414,172 - 14,451,362 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001418989 (Get FASTA)   NCBI Sequence Viewer  
  NP_001418990 (Get FASTA)   NCBI Sequence Viewer  
  NP_001418991 (Get FASTA)   NCBI Sequence Viewer  
  NP_001418993 (Get FASTA)   NCBI Sequence Viewer  
  NP_001418994 (Get FASTA)   NCBI Sequence Viewer  
  NP_001418995 (Get FASTA)   NCBI Sequence Viewer  
  NP_001418996 (Get FASTA)   NCBI Sequence Viewer  
  NP_001418997 (Get FASTA)   NCBI Sequence Viewer  
  NP_001418998 (Get FASTA)   NCBI Sequence Viewer  
  NP_001418999 (Get FASTA)   NCBI Sequence Viewer  
  NP_001419000 (Get FASTA)   NCBI Sequence Viewer  
  NP_001419001 (Get FASTA)   NCBI Sequence Viewer  
  NP_001419002 (Get FASTA)   NCBI Sequence Viewer  
  NP_001419003 (Get FASTA)   NCBI Sequence Viewer  
  NP_001419004 (Get FASTA)   NCBI Sequence Viewer  
  NP_001419005 (Get FASTA)   NCBI Sequence Viewer  
  XP_006249024 (Get FASTA)   NCBI Sequence Viewer  
  XP_017453977 (Get FASTA)   NCBI Sequence Viewer  
  XP_017453978 (Get FASTA)   NCBI Sequence Viewer  
  XP_017453979 (Get FASTA)   NCBI Sequence Viewer  
  XP_017453980 (Get FASTA)   NCBI Sequence Viewer  
  XP_017453981 (Get FASTA)   NCBI Sequence Viewer  
  XP_017453982 (Get FASTA)   NCBI Sequence Viewer  
  XP_017453983 (Get FASTA)   NCBI Sequence Viewer  
  XP_038945888 (Get FASTA)   NCBI Sequence Viewer  
  XP_038945889 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127933 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127934 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127935 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127936 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127937 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127938 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127939 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127940 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127941 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127942 (Get FASTA)   NCBI Sequence Viewer  
  XP_221965 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL89725 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000001667.7
  ENSRNOP00000040350.5
  ENSRNOP00000094917.1
RefSeq Acc Id: XP_221965   ⟸   XM_221965
- Peptide Label: isoform X6
- UniProtKB: D4ADQ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006249024   ⟸   XM_006248962
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017453977   ⟸   XM_017598488
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017453978   ⟸   XM_017598489
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_017453979   ⟸   XM_017598490
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_017453980   ⟸   XM_017598491
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_017453981   ⟸   XM_017598492
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_017453983   ⟸   XM_017598494
- Peptide Label: isoform X19
- Sequence:
RefSeq Acc Id: XP_017453982   ⟸   XM_017598493
- Peptide Label: isoform X14
- Sequence:
Ensembl Acc Id: ENSRNOP00000040350   ⟸   ENSRNOT00000051565
Ensembl Acc Id: ENSRNOP00000001667   ⟸   ENSRNOT00000001667
RefSeq Acc Id: XP_038945889   ⟸   XM_039089961
- Peptide Label: isoform X17
RefSeq Acc Id: XP_038945888   ⟸   XM_039089960
- Peptide Label: isoform X10
Ensembl Acc Id: ENSRNOP00000094917   ⟸   ENSRNOT00000117335
RefSeq Acc Id: XP_063127933   ⟸   XM_063271863
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063127935   ⟸   XM_063271865
- Peptide Label: isoform X9
RefSeq Acc Id: XP_063127936   ⟸   XM_063271866
- Peptide Label: isoform X12
RefSeq Acc Id: XP_063127934   ⟸   XM_063271864
- Peptide Label: isoform X8
RefSeq Acc Id: XP_063127937   ⟸   XM_063271867
- Peptide Label: isoform X13
RefSeq Acc Id: XP_063127940   ⟸   XM_063271870
- Peptide Label: isoform X18
RefSeq Acc Id: XP_063127942   ⟸   XM_063271872
- Peptide Label: isoform X21
RefSeq Acc Id: XP_063127938   ⟸   XM_063271868
- Peptide Label: isoform X15
RefSeq Acc Id: XP_063127939   ⟸   XM_063271869
- Peptide Label: isoform X16
RefSeq Acc Id: XP_063127941   ⟸   XM_063271871
- Peptide Label: isoform X20

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4ADQ3-F1-model_v2 AlphaFold D4ADQ3 1-786 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698460
Promoter ID:EPDNEW_R8977
Type:initiation region
Name:Iqce_1
Description:IQ motif containing E
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01216,030,728 - 16,030,788EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1311349 AgrOrtholog
BioCyc Gene G2FUF-19931 BioCyc
Ensembl Genes ENSRNOG00000001241 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000001667.7 UniProtKB/TrEMBL
  ENSRNOT00000051565.7 UniProtKB/TrEMBL
  ENSRNOT00000117335.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.190 UniProtKB/TrEMBL
InterPro IQ_CaM-bd_region UniProtKB/TrEMBL
NCBI Gene 304318 ENTREZGENE
PANTHER IQ DOMAIN-CONTAINING PROTEIN E UniProtKB/TrEMBL
  ROPPORIN-1-LIKE PROTEIN UniProtKB/TrEMBL
Pfam PF00612 UniProtKB/TrEMBL
PhenoGen Iqce PhenoGen
PROSITE PS50096 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000001241 RatGTEx
SMART SM00015 UniProtKB/TrEMBL
UniProt A0A8I6B1N9 ENTREZGENE, UniProtKB/TrEMBL
  A6K1R7 ENTREZGENE, UniProtKB/TrEMBL
  D3ZUL9 ENTREZGENE, UniProtKB/TrEMBL
  D4ADQ3 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Iqce  IQ motif containing E   Iqce_predicted  IQ motif containing E (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Iqce_predicted  IQ motif containing E (predicted)  RGD1311349_predicted  similar to RIKEN cDNA 1700028P05 (predicted)  Symbol and Name updated 1299863 APPROVED
2005-01-20 RGD1311349_predicted  similar to RIKEN cDNA 1700028P05 (predicted)  LOC304318_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC304318_predicted  similar to RIKEN cDNA 1700028P05 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL