Nrros (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 11 | 82,133,608 - 82,151,160 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 11 | 82,133,144 - 82,151,308 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | 11 | 68,628,641 - 68,646,152 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 11 | 68,628,712 - 68,646,142 (+) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 11 | 77,465,760 - 77,483,195 (+) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 11 | 70,123,216 - 70,140,811 (+) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 11 | 69,154,869 - 69,172,305 (+) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 11 | 71,872,728 - 71,889,897 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 11 | 71,872,830 - 71,889,887 (+) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 11 | 74,956,672 - 74,973,823 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 11 | 70,449,116 - 70,466,412 (+) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 11 | 68,051,440 - 68,068,647 (+) | NCBI | | Celera | | | RGSC_v3.1 | 11 | 70,506,704 - 70,523,991 (+) | NCBI | | | | | Cytogenetic Map | 11 | q22 | NCBI | | | | |
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NRROS (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 3 | 196,639,694 - 196,662,004 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 196,639,694 - 196,662,004 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 3 | 196,366,565 - 196,388,875 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 197,851,053 - 197,873,272 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Celera | 3 | 194,948,253 - 194,970,470 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q29 | NCBI | | | | | HuRef | 3 | 193,663,748 - 193,685,954 (+) | NCBI | | HuRef | | | CHM1_1 | 3 | 196,337,936 - 196,360,147 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 199,359,041 - 199,381,340 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Nrros (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 16 | 31,961,603 - 31,984,412 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 16 | 31,961,603 - 31,984,412 (-) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 16 | 32,142,785 - 32,165,594 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 16 | 32,142,785 - 32,165,594 (-) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 16 | 32,142,911 - 32,165,562 (-) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 16 | 32,062,572 - 32,085,223 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 16 | 32,639,762 - 32,659,142 (-) | NCBI | | Celera | | | Cytogenetic Map | 16 | B2 | NCBI | | | | | cM Map | 16 | 22.4 | NCBI | | | | |
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Nrros (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955420 | 12,792,111 - 12,801,963 (+) | Ensembl | | | | | ChiLan1.0 | NW_004955420 | 12,792,173 - 12,798,645 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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NRROS (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 2 | 194,510,493 - 194,533,526 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 194,515,212 - 194,538,237 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 193,984,797 - 194,007,173 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 203,925,101 - 203,948,506 (+) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 203,920,334 - 203,948,506 (+) | Ensembl | | | panPan2 | panpan1.1 |
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NRROS (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 33 | 29,682,182 - 29,699,469 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 33 | 29,692,371 - 29,767,771 (+) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 33 | 29,699,502 - 29,723,146 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 33 | 29,919,288 - 29,942,927 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 33 | 29,919,307 - 29,942,787 (+) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 33 | 29,696,615 - 29,720,261 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 33 | 29,751,932 - 29,775,642 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 33 | 30,374,170 - 30,397,856 (+) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Nrros (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024405602 | 124,634,255 - 124,663,044 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936784 | 1,222,042 - 1,250,565 (+) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936784 | 1,222,381 - 1,250,501 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
NRROS (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 13 | 133,470,645 - 133,496,223 (-) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 133,470,641 - 133,496,218 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 143,119,166 - 143,143,926 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
NRROS (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 15 | 90,558,837 - 90,580,291 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 15 | 90,558,770 - 90,579,175 (-) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666041 | 64,347,551 - 64,369,085 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Nrros (Heterocephalus glaber - naked mole-rat) |
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Nrros (Rattus rattus - black rat) |
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