Ccdc77 (coiled-coil domain containing 77)

Gene: Ccdc77 (coiled-coil domain containing 77) Rattus norvegicus

Analyze

Symbol:

Ccdc77

Name:

coiled-coil domain containing 77

RGD ID:

1310710

Description:

Predicted to be active in centrosome. Orthologous to human CCDC77 (coiled-coil domain containing 77); INTERACTS WITH 17beta-estradiol; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

coiled-coil domain-containing protein 77; LOC312677; RGD1310710; similar to RIKEN cDNA 2700091N06

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CCDC77 (coiled-coil domain containing 77)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Ccdc77 (coiled-coil domain containing 77)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ccdc77 (coiled-coil domain containing 77)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CCDC77 (coiled-coil domain containing 77)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CCDC77 (coiled-coil domain containing 77)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ccdc77 (coiled-coil domain containing 77)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CCDC77 (coiled-coil domain containing 77)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CCDC77 (coiled-coil domain containing 77)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ccdc77 (coiled-coil domain containing 77)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Ccdc77 (coiled-coil domain containing 77)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	CCDC77 (coiled-coil domain containing 77)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ccdc77 (coiled-coil domain containing 77)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ccdc77	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	155,206,402 - 155,238,235 (-)	NCBI		GRCr8
mRatBN7.2	4	153,534,184 - 153,566,059 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	153,534,187 - 153,566,545 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	159,809,663 - 159,832,123 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	155,593,389 - 155,615,851 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	154,216,750 - 154,239,210 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	152,860,669 - 152,892,518 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	152,860,675 - 152,883,210 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	219,949,764 - 219,981,609 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	156,704,407 - 156,726,949 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	156,950,211 - 156,975,840 (-)	NCBI
Celera	4	142,386,306 - 142,408,811 (-)	NCBI		Celera
Cytogenetic Map	4	q42	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Hyperphosphatemic Familial Tumoral Calcinosis 1 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP,ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-butoxyethanol (ISO)

2-methylcholine (ISO)

3-chloropropane-1,2-diol (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

acetamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

azathioprine (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

C60 fullerene (EXP)

carbamazepine (ISO)

chlorpyrifos (ISO)

copper atom (EXP)

copper(0) (EXP)

copper(II) sulfate (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

dibutyl phthalate (ISO)

dicrotophos (ISO)

diuron (EXP)

dorsomorphin (ISO)

endosulfan (EXP)

epoxiconazole (ISO)

flutamide (EXP)

folic acid (ISO)

indometacin (ISO)

lead(0) (ISO)

leflunomide (ISO)

metformin (EXP)

oxaliplatin (EXP)

ozone (ISO)

p-toluidine (EXP)

paracetamol (ISO)

phenformin (EXP)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

resveratrol (ISO)

SB 431542 (ISO)

topotecan (EXP)

urethane (ISO)

valproic acid (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

centrosome (IBA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:19946888	PMID:21399614

Genomics

Comparative Map Data

Ccdc77
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	155,206,402 - 155,238,235 (-)	NCBI		GRCr8
mRatBN7.2	4	153,534,184 - 153,566,059 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	153,534,187 - 153,566,545 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	159,809,663 - 159,832,123 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	155,593,389 - 155,615,851 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	154,216,750 - 154,239,210 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	152,860,669 - 152,892,518 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	152,860,675 - 152,883,210 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	219,949,764 - 219,981,609 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	156,704,407 - 156,726,949 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	156,950,211 - 156,975,840 (-)	NCBI
Celera	4	142,386,306 - 142,408,811 (-)	NCBI		Celera
Cytogenetic Map	4	q42	NCBI

CCDC77
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	389,347 - 442,642 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	389,273 - 442,642 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	498,513 - 551,808 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	384,939 - 422,069 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	12	2,107,358 - 2,158,930 (+)	NCBI		Celera
Cytogenetic Map	12	p13.33	NCBI
HuRef	12	351,204 - 406,655 (+)	NCBI		HuRef
CHM1_1	12	497,517 - 549,465 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	386,201 - 438,211 (+)	NCBI		T2T-CHM13v2.0

Ccdc77
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	120,301,283 - 120,341,330 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	120,301,284 - 120,341,335 (-)	Ensembl		GRCm39 Ensembl
GRCm38	6	120,324,322 - 120,364,369 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	120,324,323 - 120,364,374 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	120,274,716 - 120,307,378 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	120,290,317 - 120,322,979 (-)	NCBI		MGSCv36	mm8
Celera	6	122,161,624 - 122,194,109 (-)	NCBI		Celera
Cytogenetic Map	6	F1	NCBI
cM Map	6	56.95	NCBI

Ccdc77
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955454	6,722,239 - 6,760,114 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955454	6,721,624 - 6,769,223 (-)	NCBI	ChiLan1.0	ChiLan1.0

CCDC77
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	5,876,609 - 5,929,319 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	5,873,385 - 5,926,095 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	452,138 - 504,771 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	435,843 - 474,736 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	443,382 - 474,011 (+)	Ensembl	panpan1.1		panPan2

CCDC77
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	42,461,831 - 42,494,224 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	42,465,232 - 42,503,999 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	4,190,039 - 4,222,751 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	42,819,989 - 42,853,190 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	42,819,945 - 42,862,479 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	42,759,709 - 42,792,421 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	42,731,186 - 42,763,635 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	3,550,587 - 3,583,449 (-)	NCBI		UU_Cfam_GSD_1.0

Ccdc77
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	108,564,377 - 108,613,437 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936606	586,449 - 619,067 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936606	570,536 - 619,688 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CCDC77
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	67,725,834 - 67,760,049 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	67,725,757 - 67,756,516 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	69,928,798 - 69,967,305 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CCDC77
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	394,698 - 434,647 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	399,895 - 434,612 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666063	7,906,879 - 7,946,950 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ccdc77
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624735	8,655,175 - 8,696,968 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624735	8,655,247 - 8,696,778 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Ccdc77
180 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	160
Count of miRNA genes:	114
Interacting mature miRNAs:	140
Transcripts:	ENSRNOT00000056200
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2316958	Gluco58	Glucose level QTL 58	10		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	11320076	180699135	Rat
1576305	Emca6	Estrogen-induced mammary cancer QTL 6	5.8		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	4	44463720	155883716	Rat
738009	Sach4	Saccharine consumption QTL 4	4.9	0.000016	consumption behavior trait (VT:0002069)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	4	59948935	154902892	Rat
738016	Alc16	Alcohol consumption QTL 16	3.6	0.00015	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	59948935	154902892	Rat
738031	Alc14	Alcohol consumption QTL 14	7.6	0.00003	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	59948935	154902892	Rat
631674	Iddm14	Insulin dependent diabetes mellitus QTL 14			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	4	64528739	157573521	Rat
1576316	Ept5	Estrogen-induced pituitary tumorigenesis QTL 5	3.8		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	4	83428419	177635233	Rat
1358202	Gluco11	Glucose level QTL 11	2.4	0.02	adipocyte glucose uptake trait (VT:0004185)	absolute change in adipocyte glucose uptake (CMO:0000873)	4	85379421	167139601	Rat
634335	Anxrr16	Anxiety related response QTL 16	7.22		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	4	93308457	167139447	Rat
7207480	Bss105	Bone structure and strength QTL 105	8.1		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	4	109827074	154827074	Rat
1549832	Bss3	Bone structure and strength QTL 3	11		femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	4	109827074	154827074	Rat
737821	Hcar9	Hepatocarcinoma resistance QTL 9	3.7		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	4	109866907	167139601	Rat
1331759	Hrtrt13	Heart rate QTL 13	3.54628		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	4	110275411	168266883	Rat
6478760	Anxrr45	Anxiety related response QTL 45		0.06717	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	110870972	155870972	Rat
6478763	Anxrr46	Anxiety related response QTL 46		0.07428	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	110870972	155870972	Rat
12798519	Anxrr54	Anxiety related response QTL 54	2.54	0.05	locomotor behavior trait (VT:0001392)	distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)	4	114627026	159627026	Rat
724535	Cm18	Cardiac mass QTL 18	2.6		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	4	118856416	163856416	Rat
1331802	Srn5	Serum renin concentration QTL 5	3.045		renin activity (VT:0005581)	plasma renin activity level (CMO:0000116)	4	119428175	157578333	Rat
634347	Hcar8	Hepatocarcinoma resistance QTL 8	5.8		liver integrity trait (VT:0010547)	liver tumorous lesion area to total liver area ratio (CMO:0001075)	4	123143783	168143783	Rat
631683	Bp116	Blood pressure QTL 116		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	124303370	169303370	Rat
6478778	Anxrr51	Anxiety related response QTL 51		0.25384	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)	4	124778595	169778595	Rat
7411558	Bw133	Body weight QTL 133	13.84	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	125590636	170590636	Rat
61451	Ciaa4	CIA Autoantibody QTL 4	3.1		blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	4	126395976	167139601	Rat
737978	Pia23	Pristane induced arthritis QTL 23	5.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	131730738	167139601	Rat
631511	Pia7	Pristane induced arthritis QTL 7	4.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	131730738	167139601	Rat
1549827	Scl46	Serum cholesterol level QTL 46	3.5		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	4	132396220	177396220	Rat
724558	Plsm2	Polydactyly-luxate syndrome (PLS) morphotypes QTL 2		0.0003	hindlimb integrity trait (VT:0010563)	hind foot phalanges count (CMO:0001949)	4	132422778	177422778	Rat
61422	Cia13	Collagen induced arthritis QTL 13	4.5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	132642577	167139601	Rat
2303623	Vencon2	Ventilatory control QTL 2	3.8		respiration trait (VT:0001943)	minute ventilation (CMO:0000132)	4	135204660	180204660	Rat
1578674	Bmd12	Bone mineral density QTL 12	3.8		femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	4	135699135	180699135	Rat
2293659	Bmd35	Bone mineral density QTL 35	4.5	0.0001	femur strength trait (VT:0010010)	femoral neck ultimate force (CMO:0001703)	4	137755016	181392681	Rat
61362	Oia2	Oil induced arthritis QTL 2		0.001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	138503169	173369699	Rat
1298524	Oia8	Oil induced arthritis QTL 8			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	138503169	173369699	Rat
1331738	Bp209	Blood pressure QTL 209	2.979		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	4	138503169	179293946	Rat
6478718	Anxrr34	Anxiety related response QTL 34		0.00896	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	144639524	182687754	Rat
6478748	Anxrr42	Anxiety related response QTL 42		0.28008	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	144639524	182687754	Rat
6478754	Anxrr43	Anxiety related response QTL 43		0.14035	locomotor behavior trait (VT:0001392)	distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)	4	144639524	182687754	Rat
6478693	Anxrr32	Anxiety related response QTL 32		0.00092	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)	4	144639524	182687754	Rat
6478700	Anxrr33	Anxiety related response QTL 33		0.00896	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	144639524	182687754	Rat
10401796	Kidm48	Kidney mass QTL 48			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	4	145568712	182687754	Rat
634342	Cia24	Collagen induced arthritis QTL 24	4.5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	146565735	175236377	Rat
12798525	Anxrr57	Anxiety related response QTL 57	3.21	0.05	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	147278504	167139601	Rat
1582237	Kidm34	Kidney mass QTL 34	4	0.0001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	4	148090542	168069246	Rat
61446	Coreg2	Compensatory renal growth QTL 2	3.5		kidney mass (VT:0002707)	compensatory renal growth score (CMO:0001894)	4	148423102	157580971	Rat
1581574	Eae20	Experimental allergic encephalomyelitis QTL 20	7.8		nervous system integrity trait (VT:0010566)	percentage of study population developing experimental autoimmune encephalomyelitis during a period of time (CMO:0001047)	4	153031106	158841762	Rat

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	1	28	28	22	7	22			38	20	35	1
Low	2	15	29	19	12	19	8	11	36	15	6	10	8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001191752	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237238	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237239	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237240	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237241	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237243	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237244	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763244	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763245	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763246	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592649	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107653	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107654	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107655	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107656	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107659	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286115	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286116	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286117	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286118	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005503234	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473964	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000056200 ⟹ ENSRNOP00000053046

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	4	153,534,191 - 153,560,687 (-)	Ensembl
Rnor_6.0 Ensembl	4	152,860,675 - 152,883,210 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000100367 ⟹ ENSRNOP00000089671

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	4	153,534,187 - 153,565,789 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000112339 ⟹ ENSRNOP00000085428

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	4	153,534,187 - 153,566,545 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000114158 ⟹ ENSRNOP00000095525

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	4	153,550,794 - 153,554,491 (-)	Ensembl

RefSeq Acc Id:

NM_001191752 ⟹ NP_001178681

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,206,402 - 155,228,944 (-)	NCBI
mRatBN7.2	4	153,534,185 - 153,556,728 (-)	NCBI
Rnor_6.0	4	152,860,669 - 152,883,210 (-)	NCBI
Rnor_5.0	4	219,949,764 - 219,981,609 (-)	NCBI
Celera	4	142,386,306 - 142,408,811 (-)	NCBI

Sequence:

show sequence

ATGAATTTTACTCCGACACATACACCCATCTGCAGAAAAATAACAGTTGCCTCCAGGCGCGGTG
CTGGCTCTGGCTTTGATGATACCAACAGGTGGAAGAAAATGGCAGACTCAGTGGAGTCAACTCC
CCTGCCTTCAATAGAGGATCGTCTGGCTGTCCTTCGCCCTTCTCAGGAGCTTCTGGAGTATTAT
CAGAAGAAGATGGCTAACTTTGAGGCAGAGAATGAAGATGTGCTGAAGAAGTTAGAGCTCTACA
GAGAAACTTGTGAAGAACAGCATAACCTCGAGTGGAGCTTGCAGCAGAGAGAGGGAGAGATTGC
TGAACTGCAGAGAGCCCTGAGCGACATGCAGGTCTGCCTCTTCCAGGAAAGGGAGCATGTCCTA
CGACTCTACTCAGAGAATGACCGGCTAAGGATCAGGGAGCTGGAGGACAAGAAAAAGATTCAGA
ATCTATTGGCTCTTGTGGGAACAGATACCGGCGAAGTGACCTATTTTCTTAAGGAGCCTCCTCA
CAAGGCCAGCATTCTCCAGAAGACTATCCAGGCCGTAGATGTGTGTGAGCCTTCAGCTTCCAAA
GCAGATCCTACAGTAAGCAAAAGACGAATAAGAGTAAAGGACAAGGAAGACATTTCTGAGCGTT
ACCAGAGGGACATACAGACACTCCTCCTGCAGGTGGAAGCACTTCAGGCCCAGCTGGGAGAGCA
GACAAAGCTTTCTAGAGAACAAGTCGAAGGGCTCATGGAGGACAGACGGATCCGAATCGAGGAG
ATCCAAGTTCAGCACCAGAGAAATCAAGAGAAAATCAAAGAGCTGACCAAGAGTCTCCATCATA
CCCAAGAACTGCTCTACCAGAGCACCAAAGACTTTCTACAACTAAAATTTGAAAACCAAAATAA
AGAGAAGTTGTGGATGCTTGAAAGAGACCACCTGATGTCAGTGATGAAGCAGCACAGAGCGCAG
TACAGGAAGAAAGAAGACAAGCTTGGGAAAGTCGTTCCCACTTTACATGAGAATCATCATGCTC
AGAATGAGTATGTGAAGTCTCTTAAGGATAAGCTAACACAAGAGAAAAAGCTGTCCAACATGTA
CCAAGAACAGTGCATTTCCCTAGAAGAGGAACTTGCTCGAATTCGGGAGGAAGAAGGAGTGAGG
AGAGAGATCTTCAAGGATCGCTCCAACAAGATGGGCAAGCGCTTACAGATAATGACAAGACGCT
ATCAGGCCTTGGAGCATCGACGAATCCTGGAAGTAGAGGGCTTCAAGACAGACATTAAGGCTCT
CCGACAGAAGCTGAGAGACCTGGAGCAAACGCTCTATAAGGCAACCATGAACACCCATGGAAAT
CAGGATCTGGCCATTCTGTGTGAAGTCCGTGATAGCAACAGGAGAGCTCATAAGATACAAGGAG
AGCTGAAGAGCCTCAAGTCTAAAATGTTCAGTCTAGAGAATGAGCTTAGGCTGTGTTGATGTCT
CCTTTCAGGGTTGGTTTCCAGAAACCTGAGGCAAGGTCACCTGTTCCTGGAGAGTGGACATGGA
GTTGTCCAGAGTAGTGACATCAGTTTTAATGAAGATAGTGTTAAAGGCATGATAGCTCACACCT
ACAATCCCAGCACTTGGGAAACTGAGCCAGGTGGATCTCTCTGATTCTAGACCATCCAAGGCTA
CTTAATAAGACCCCATCTCCAAAAACAACAAAAATAAAACATCAAAACCAGAGAGGAAAGAAGA
AAACCAGAAAACAGTGGCAAATCTGGCCCTGGGAAAGCTGCACTAGCAGACTGCCGTCTCCGGT
GGCCCTGCTCGCCTCACTGGGGGTAGGAACTGTGGCCGAGACTTTCCTGCTCTTCCATTGTATA
TGGATGGACTTTCCTGTCTATAAAGTCAGTGATGGGATGTAACTTACCTGGGGAAGTGCTTGTC
CACCGTACGGAAAGCCCGGGTTCTGTTGCTAGCACCACCTAAAGCCAGGGTTGGTGGCTCCCTG
CAGTCACCACTGGAAAGAGAAGTATGTAGGAGAATCTGAAGTTCACATTCACCCTTGGCTGTGT
GGTGAGTTCCAGGCTAGCCTGGGCTACATAAGACCGTGTCTAAAAATGAAAACAAGAAACAAAC
AAAAACAAGAAAACAAACTAAGTGCCAGTGGGAGAACATGTTTCCAGGAGGGCCAAAGTCATTC
ACTAAAGTGCATTCCTACTCAGGGAAGGAAGGAAGCAGCAAATTACATGGGCAGATTCACGGAC
TTAGCTGTGCCCAAGTGACTGACCACCAGGGGGCAGCAGAGCCCTTGCTCCTCAGTAAACTTGG
TCATCAAGAAAAGGGTGCTACTTTATGTACAGTAGGCAAAACCAATATGGTAATTTATGTGAAG
AAGTTTAACATTTTATCAATATTTTTTAGATTATTCAAATTAATATTTTCAATAAAATGTAGTG
TTTAAAACA

hide sequence

RefSeq Acc Id:

XM_006237236 ⟹ XP_006237298

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,206,402 - 155,238,235 (-)	NCBI
mRatBN7.2	4	153,534,184 - 153,566,059 (-)	NCBI
Rnor_6.0	4	152,860,669 - 152,892,518 (-)	NCBI
Rnor_5.0	4	219,949,764 - 219,981,609 (-)	NCBI

Sequence:

show sequence

TCTCGCCTTCCTCCCTTCCATGACAGCCGGCGTGCCTTTTTTTCTCAGCTTGCCGGTCAAGGTT
CTGCACTCTCCGTCCACTCTGGGTGCGTGGCCCCTGATGGCTCCGCGACCTCTCCTCGAGAGGC
GAGGAAGAAGCTACCCCGCAAGGTGGAACGCGCTCTTCCGGCGCGCGGAGGAATGTGTAATGCC
TCAGAGAGCAGAGGTAGTGCTTCCGGGTCTCCCTGTTCCGTTCAGACTCTTACTGTGCTGGACT
CAGATGATCTTCCTGTCTCAGCTCTGGAACTACACAATAACAGTTGCCTCCAGGCGCGGTGCTG
GCTCTGGCTTTGATGATACCAACAGGTGGAAGAAAATGGCAGACTCAGTGGAGTCAACTCCCCT
GCCTTCAATAGAGGATCGTCTGGCTGTCCTTCGCCCTTCTCAGGAGCTTCTGGAGTATTATCAG
AAGAAGATGGCTAACTTTGAGGCAGAGAATGAAGATGTGCTGAAGAAGTTAGAGCTCTACAGAG
AAACTTGTGAAGAACAGCATAACCTCGAGTGGAGCTTGCAGCAGAGAGAGGGAGAGATTGCTGA
ACTGCAGAGAGCCCTGAGCGACATGCAGGTCTGCCTCTTCCAGGAAAGGGAGCATGTCCTACGA
CTCTACTCAGAGAATGACCGGCTAAGGATCAGGGAGCTGGAGGACAAGAAAAAGATTCAGAATC
TATTGGCTCTTGTGGGAACAGATACCGGCGAAGTGACCTATTTTCTTAAGGAGCCTCCTCACAA
GGCCAGCATTCTCCAGAAGACTATCCAGGCCGTAGATGTGTGTGAGCCTTCAGCTTCCAAAGCA
GATCCTACAGTAAGCAAAAGACGAATAAGAGTAAAGGACAAGGAAGACATTTCTGAGCGTTACC
AGAGGGACATACAGACACTCCTCCTGCAGGTGGAAGCACTTCAGGCCCAGCTGGGAGAGCAGAC
AAAGCTTTCTAGAGAACAAGTCGAAGGGCTCATGGAGGACAGACGGATCCGAATCGAGGAGATC
CAAGTTCAGCACCAGAGAAATCAAGAGAAAATCAAAGAGCTGACCAAGAGTCTCCATCATACCC
AAGAACTGCTCTACCAGAGCACCAAAGACTTTCTACAACTAAAATTTGAAAACCAAAATAAAGA
GAAGTTGTGGATGCTTGAAAGAGACCACCTGATGTCAGTGATGAAGCAGCACAGAGCGCAGTAC
AGGAAGAAAGAAGACAAGCTTGGGAAAGTCGTTCCCACTTTACATGAGAATCATCATGCTCAGA
ATGAGTATGTGAAGTCTCTTAAGGATAAGCTAACACAAGAGAAAAAGCTGTCCAACATGTACCA
AGAACAGTGCATTTCCCTAGAAGAGGAACTTGCTCGAATTCGGGAGGAAGAAGGAGTGAGGAGA
GAGATCTTCAAGGATCGCTCCAACAAGATGGGCAAGCGCTTACAGATAATGACAAGACGCTATC
AGGCCTTGGAGCATCGACGAATCCTGGAAGTAGAGGGCTTCAAGACAGACATTAAGGCTCTCCG
ACAGAAGCTGAGAGACCTGGAGCAAACGCTCTATAAGGCAACCATGAACACCCATGGAAATCAG
GATCTGGCCATTCTGTGTGAAGTCCGTGATAGCAACAGGAGAGCTCATAAGATACAAGGAGAGC
TGAAGAGCCTCAAGTCTAAAATGTTCAGTCTAGAGAATGAGCTTAGGCTGTGTTGATGTCTCCT
TTCAGGGTTGGTTTCCAGAAACCTGAGGCAAGGTCACCTGTTCCTGGAGAGTGGACATGGAGTT
GTCCAGAGTAGTGACATCAGTTTTAATGAAGATAGTGTTAAAGGCATGATAGCTCACACCTACA
ATCCCAGCACTTGGGAAACTGAGCCAGGTGGATCTCTCTGATTCTAGACCATCCAAGGCTACTT
AATAAGACCCCATCTCCAAAAACAACAAAAATAAAACATCAAAACCAGAGAGGAAAGAAGAAAA
CCAGAAAACAGTGGCAAATCTGGCCCTGGGAAAGCTGCACTAGCAGACTGCCGTCTCCGGTGGC
CCTGCTCGCCTCACTGGGGGTAGGAACTGTGGCCGAGACTTTCCTGCTCTTCCATTGTATATGG
ATGGACTTTCCTGTCTATAAAGTCAGTGATGGGATGTAACTTACCTGGGGAAGTGCTTGTCCAC
CGTACGGAAAGCCCGGGTTCTGTTGCTAGCACCACCTAAAGCCAGGGTTGGTGGCTCCCTGCAG
TCACCACTGGAAAGAGAAGTATGTAGGAGAATCTGAAGTTCACATTCACCCTTGGCTGTGTGGT
GAGTTCCAGGCTAGCCTGGGCTACATAAGACCGTGTCTAAAAATGAAAACAAGAAACAAACAAA
AACAAGAAAACAAACTAAGTGCCAGTGGGAGAACATGTTTCCAGGAGGGCCAAAGTCATTCACT
AAAGTGCATTCCTACTCAGGGAAGGAAGGAAGCAGCAAATTACATGGGCAGATTCACGGACTTA
GCTGTGCCCAAGTGACTGACCACCAGGGGGCAGCAGAGCCCTTGCTCCTCAGTAAACTTGGTCA
TCAAGAAAAGGGTGCTACTTTATGTACAGTAGGCAAAACCAATATGGTAATTTATGTGAAGAAG
TTTAACATTTTATCAATATTTTTTAGATTATTCAAATTAATATTTTCAATAAAATGTAGTGTTT
AAAACA

hide sequence

RefSeq Acc Id:

XM_006237238 ⟹ XP_006237300

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,206,402 - 155,238,016 (-)	NCBI
mRatBN7.2	4	153,534,191 - 153,565,813 (-)	NCBI
Rnor_6.0	4	152,860,669 - 152,890,802 (-)	NCBI
Rnor_5.0	4	219,949,764 - 219,981,609 (-)	NCBI

Sequence:

show sequence

TTGAAAGCAAAAGAAGCAACTTTTACAGGAAAAATAAATTCAAGTAAATGGAGGATAAACACAT
TCCAAGTATGACATATTTATCTGTAACTTACCAGTGTTAGGGTAGAATGAAATTAATACCTAAG
TCTGGTAATTATTTGGCAAGGCTATGAGAGATGGCCTCTGATGTCTTTCATTTTACCTTTGAGC
CAGGGTCTCCCTGTTCCGTTCAGACTCTTACTGTGCTGGACTCAGATGATCTTCCTGTCTCAGC
TCTGGAACTACACTGAGAAACTACACTTCCCAGGAACCTCTGCCGGTGAGGCGCAAGGCAAGGT
GGGAAGAGCTGCTGGATGAACAACCGTCCTATTGGTGTGCAACCTGAAAGGCCGCCTGAGCTCG
TGAGCGATTGGTAGGATTTCGTAGACGCTCGCTGATTTGAGTTGTTTTTCCGTTGCGTTGTTGG
ATTCCAGGGGTTAGTGCTTGGTATGAATAAGGCAGAATGAATTTTACTCCGACACATACACCCA
TCTGCAGAAAAATAACAGTTGCCTCCAGGCGCGGTGCTGGCTCTGGCTTTGATGATACCAACAG
GTGGAAGAAAATGGCAGACTCAGTGGAGTCAACTCCCCTGCCTTCAATAGAGGATCGTCTGGCT
GTCCTTCGCCCTTCTCAGGAGCTTCTGGAGTATTATCAGAAGAAGATGGCTAACTTTGAGGCAG
AGAATGAAGATGTGCTGAAGAAGTTAGAGCTCTACAGAGAAACTTGTGAAGAACAGCATAACCT
CGAGTGGAGCTTGCAGCAGAGAGAGGGAGAGATTGCTGAACTGCAGAGAGCCCTGAGCGACATG
CAGGTCTGCCTCTTCCAGGAAAGGGAGCATGTCCTACGACTCTACTCAGAGAATGACCGGCTAA
GGATCAGGGAGCTGGAGGACAAGAAAAAGATTCAGAATCTATTGGCTCTTGTGGGAACAGATAC
CGGCGAAGTGACCTATTTTCTTAAGGAGCCTCCTCACAAGGCCAGCATTCTCCAGAAGACTATC
CAGGCCGTAGATGTGTGTGAGCCTTCAGCTTCCAAAGCAGATCCTACAGTAAGCAAAAGACGAA
TAAGAGTAAAGGACAAGGAAGACATTTCTGAGCGTTACCAGAGGGACATACAGACACTCCTCCT
GCAGGTGGAAGCACTTCAGGCCCAGCTGGGAGAGCAGACAAAGCTTTCTAGAGAACAAGTCGAA
GGGCTCATGGAGGACAGACGGATCCGAATCGAGGAGATCCAAGTTCAGCACCAGAGAAATCAAG
AGAAAATCAAAGAGCTGACCAAGAGTCTCCATCATACCCAAGAACTGCTCTACCAGAGCACCAA
AGACTTTCTACAACTAAAATTTGAAAACCAAAATAAAGAGAAGTTGTGGATGCTTGAAAGAGAC
CACCTGATGTCAGTGATGAAGCAGCACAGAGCGCAGTACAGGAAGAAAGAAGACAAGCTTGGGA
AAGTCGTTCCCACTTTACATGAGAATCATCATGCTCAGAATGAGTATGTGAAGTCTCTTAAGGA
TAAGCTAACACAAGAGAAAAAGCTGTCCAACATGTACCAAGAACAGTGCATTTCCCTAGAAGAG
GAACTTGCTCGAATTCGGGAGGAAGAAGGAGTGAGGAGAGAGATCTTCAAGGATCGCTCCAACA
AGATGGGCAAGCGCTTACAGATAATGACAAGACGCTATCAGGCCTTGGAGCATCGACGAATCCT
GGAAGTAGAGGGCTTCAAGACAGACATTAAGGCTCTCCGACAGAAGCTGAGAGACCTGGAGCAA
ACGCTCTATAAGGCAACCATGAACACCCATGGAAATCAGGATCTGGCCATTCTGTGTGAAGTCC
GTGATAGCAACAGGAGAGCTCATAAGATACAAGGAGAGCTGAAGAGCCTCAAGTCTAAAATGTT
CAGTCTAGAGAATGAGCTTAGGCTGTGTTGATGTCTCCTTTCAGGGTTGGTTTCCAGAAACCTG
AGGCAAGGTCACCTGTTCCTGGAGAGTGGACATGGAGTTGTCCAGAGTAGTGACATCAGTTTTA
ATGAAGATAGTGTTAAAGGCATGATAGCTCACACCTACAATCCCAGCACTTGGGAAACTGAGCC
AGGTGGATCTCTCTGATTCTAGACCATCCAAGGCTACTTAATAAGACCCCATCTCCAAAAACAA
CAAAAATAAAACATCAAAACCAGAGAGGAAAGAAGAAAACCAGAAAACAGTGGCAAATCTGGCC
CTGGGAAAGCTGCACTAGCAGACTGCCGTCTCCGGTGGCCCTGCTCGCCTCACTGGGGGTAGGA
ACTGTGGCCGAGACTTTCCTGCTCTTCCATTGTATATGGATGGACTTTCCTGTCTATAAAGTCA
GTGATGGGATGTAACTTACCTGGGGAAGTGCTTGTCCACCGTACGGAAAGCCCGGGTTCTGTTG
CTAGCACCACCTAAAGCCAGGGTTGGTGGCTCCCTGCAGTCACCACTGGAAAGAGAAGTATGTA
GGAGAATCTGAAGTTCACATTCACCCTTGGCTGTGTGGTGAGTTCCAGGCTAGCCTGGGCTACA
TAAGACCGTGTCTAAAAATGAAAACAAGAAACAAACAAAAACAAGAAAACAAACTAAGTGCCAG
TGGGAGAACATGTTTCCAGGAGGGCCAAAGTCATTCACTAAAGTGCATTCCTACTCAGGGAAGG
AAGGAAGCAGCAAATTACATGGGCAGATTCACGGACTTAGCTGTGCCCAAGTGACTGACCACCA
GGGGGCAGCAGAGCCCTTGCTCCTCAGTAAACTTGGTCATCAAGAAAAGGGTGCTACTTTATGT
ACAGTAGGCAAAACCAATATGGTAATTTATGTGAAGAAGTTTAACATTTTATCAATATTTTTTA
GATTATTCAAATTAATATTTTCAATAAAATGTAGTGTTTAAAACA

hide sequence

RefSeq Acc Id:

XM_006237239 ⟹ XP_006237301

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,206,402 - 155,238,013 (-)	NCBI
mRatBN7.2	4	153,534,191 - 153,565,813 (-)	NCBI
Rnor_6.0	4	152,860,669 - 152,890,802 (-)	NCBI
Rnor_5.0	4	219,949,764 - 219,981,609 (-)	NCBI

Sequence:

show sequence

TTGAAAGCAAAAGAAGCAACTTTTACAGGAAAAATAAATTCAAGTAAATGGAGGATAAACACAT
TCCAAGTATGACATATTTATCTGTAACTTACCAGTGTTAGGGTAGAATGAAATTAATACCTAAG
TCTGGTAATTATTTGGCAAGGCTATGAGAGATGGCCTCTGATGTCTTTCATTTTACCTTTGAGC
CAGGGTCTCCCTGTTCCGTTCAGACTCTTACTGTGCTGGACTCAGATGATCTTCCTGTCTCAGC
TCTGGAACTACACGAACCTCTGCCGGTGAGGCGCAAGGCAAGGTGGGAAGAGCTGCTGGATGAA
CAACCGTCCTATTGGTGTGCAACCTGAAAGGCCGCCTGAGCTCGTGAGCGATTGGTAGGATTTC
GTAGACGCTCGCTGATTTGAGTTGTTTTTCCGTTGCGTTGTTGGATTCCAGGGGTTAGTGCTTG
GTATGAATAAGGCAGAATGAATTTTACTCCGACACATACACCCATCTGCAGAAAAATAACAGTT
GCCTCCAGGCGCGGTGCTGGCTCTGGCTTTGATGATACCAACAGGTGGAAGAAAATGGCAGACT
CAGTGGAGTCAACTCCCCTGCCTTCAATAGAGGATCGTCTGGCTGTCCTTCGCCCTTCTCAGGA
GCTTCTGGAGTATTATCAGAAGAAGATGGCTAACTTTGAGGCAGAGAATGAAGATGTGCTGAAG
AAGTTAGAGCTCTACAGAGAAACTTGTGAAGAACAGCATAACCTCGAGTGGAGCTTGCAGCAGA
GAGAGGGAGAGATTGCTGAACTGCAGAGAGCCCTGAGCGACATGCAGGTCTGCCTCTTCCAGGA
AAGGGAGCATGTCCTACGACTCTACTCAGAGAATGACCGGCTAAGGATCAGGGAGCTGGAGGAC
AAGAAAAAGATTCAGAATCTATTGGCTCTTGTGGGAACAGATACCGGCGAAGTGACCTATTTTC
TTAAGGAGCCTCCTCACAAGGCCAGCATTCTCCAGAAGACTATCCAGGCCGTAGATGTGTGTGA
GCCTTCAGCTTCCAAAGCAGATCCTACAGTAAGCAAAAGACGAATAAGAGTAAAGGACAAGGAA
GACATTTCTGAGCGTTACCAGAGGGACATACAGACACTCCTCCTGCAGGTGGAAGCACTTCAGG
CCCAGCTGGGAGAGCAGACAAAGCTTTCTAGAGAACAAGTCGAAGGGCTCATGGAGGACAGACG
GATCCGAATCGAGGAGATCCAAGTTCAGCACCAGAGAAATCAAGAGAAAATCAAAGAGCTGACC
AAGAGTCTCCATCATACCCAAGAACTGCTCTACCAGAGCACCAAAGACTTTCTACAACTAAAAT
TTGAAAACCAAAATAAAGAGAAGTTGTGGATGCTTGAAAGAGACCACCTGATGTCAGTGATGAA
GCAGCACAGAGCGCAGTACAGGAAGAAAGAAGACAAGCTTGGGAAAGTCGTTCCCACTTTACAT
GAGAATCATCATGCTCAGAATGAGTATGTGAAGTCTCTTAAGGATAAGCTAACACAAGAGAAAA
AGCTGTCCAACATGTACCAAGAACAGTGCATTTCCCTAGAAGAGGAACTTGCTCGAATTCGGGA
GGAAGAAGGAGTGAGGAGAGAGATCTTCAAGGATCGCTCCAACAAGATGGGCAAGCGCTTACAG
ATAATGACAAGACGCTATCAGGCCTTGGAGCATCGACGAATCCTGGAAGTAGAGGGCTTCAAGA
CAGACATTAAGGCTCTCCGACAGAAGCTGAGAGACCTGGAGCAAACGCTCTATAAGGCAACCAT
GAACACCCATGGAAATCAGGATCTGGCCATTCTGTGTGAAGTCCGTGATAGCAACAGGAGAGCT
CATAAGATACAAGGAGAGCTGAAGAGCCTCAAGTCTAAAATGTTCAGTCTAGAGAATGAGCTTA
GGCTGTGTTGATGTCTCCTTTCAGGGTTGGTTTCCAGAAACCTGAGGCAAGGTCACCTGTTCCT
GGAGAGTGGACATGGAGTTGTCCAGAGTAGTGACATCAGTTTTAATGAAGATAGTGTTAAAGGC
ATGATAGCTCACACCTACAATCCCAGCACTTGGGAAACTGAGCCAGGTGGATCTCTCTGATTCT
AGACCATCCAAGGCTACTTAATAAGACCCCATCTCCAAAAACAACAAAAATAAAACATCAAAAC
CAGAGAGGAAAGAAGAAAACCAGAAAACAGTGGCAAATCTGGCCCTGGGAAAGCTGCACTAGCA
GACTGCCGTCTCCGGTGGCCCTGCTCGCCTCACTGGGGGTAGGAACTGTGGCCGAGACTTTCCT
GCTCTTCCATTGTATATGGATGGACTTTCCTGTCTATAAAGTCAGTGATGGGATGTAACTTACC
TGGGGAAGTGCTTGTCCACCGTACGGAAAGCCCGGGTTCTGTTGCTAGCACCACCTAAAGCCAG
GGTTGGTGGCTCCCTGCAGTCACCACTGGAAAGAGAAGTATGTAGGAGAATCTGAAGTTCACAT
TCACCCTTGGCTGTGTGGTGAGTTCCAGGCTAGCCTGGGCTACATAAGACCGTGTCTAAAAATG
AAAACAAGAAACAAACAAAAACAAGAAAACAAACTAAGTGCCAGTGGGAGAACATGTTTCCAGG
AGGGCCAAAGTCATTCACTAAAGTGCATTCCTACTCAGGGAAGGAAGGAAGCAGCAAATTACAT
GGGCAGATTCACGGACTTAGCTGTGCCCAAGTGACTGACCACCAGGGGGCAGCAGAGCCCTTGC
TCCTCAGTAAACTTGGTCATCAAGAAAAGGGTGCTACTTTATGTACAGTAGGCAAAACCAATAT
GGTAATTTATGTGAAGAAGTTTAACATTTTATCAATATTTTTTAGATTATTCAAATTAATATTT
TCAATAAAATGTAGTGTTTAAAACA

hide sequence

RefSeq Acc Id:

XM_006237240 ⟹ XP_006237302

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,206,402 - 155,236,507 (-)	NCBI
mRatBN7.2	4	153,534,191 - 153,561,786 (-)	NCBI
Rnor_6.0	4	152,860,669 - 152,890,802 (-)	NCBI
Rnor_5.0	4	219,949,764 - 219,981,609 (-)	NCBI

Sequence:

show sequence

TTGAAAGCAAAAGAAGCAACTTTTACAGGAAAAATAAATTCAAGTAAATGGAGGATAAACACAT
TCCAAGTATGACATATTTATCTGTAACTTACCAGTGTTAGGGTAGAATGAAATTAATACCTAAG
TCTGGTAATTATTTGGCAAGGCTATGAGAGATGGCCTCTGATGTCTTTCATTTTACCTTTGAGC
CAGGGTCTCCCTGTTCCGTTCAGACTCTTACTGTGCTGGACTCAGATGATCTTCCTGTCTCAGC
TCTGGAACTACACTGAGAAACTACACTTCCCAGGAACCTCTGCCGGTGAGGCGCAAGGCAAGGT
GGGAAGAGCTGCTGGATGAACAACCGTCCTATTGGTGTGCAACCTGAAAGGCCGCCTGAGCTCG
TGAGCGATTGGTATGAATAAGGCAGAATGAATTTTACTCCGACACATACACCCATCTGCAGAAA
AATAACAGTTGCCTCCAGGCGCGGTGCTGGCTCTGGCTTTGATGATACCAACAGGTGGAAGAAA
ATGGCAGACTCAGTGGAGTCAACTCCCCTGCCTTCAATAGAGGATCGTCTGGCTGTCCTTCGCC
CTTCTCAGGAGCTTCTGGAGTATTATCAGAAGAAGATGGCTAACTTTGAGGCAGAGAATGAAGA
TGTGCTGAAGAAGTTAGAGCTCTACAGAGAAACTTGTGAAGAACAGCATAACCTCGAGTGGAGC
TTGCAGCAGAGAGAGGGAGAGATTGCTGAACTGCAGAGAGCCCTGAGCGACATGCAGGTCTGCC
TCTTCCAGGAAAGGGAGCATGTCCTACGACTCTACTCAGAGAATGACCGGCTAAGGATCAGGGA
GCTGGAGGACAAGAAAAAGATTCAGAATCTATTGGCTCTTGTGGGAACAGATACCGGCGAAGTG
ACCTATTTTCTTAAGGAGCCTCCTCACAAGGCCAGCATTCTCCAGAAGACTATCCAGGCCGTAG
ATGTGTGTGAGCCTTCAGCTTCCAAAGCAGATCCTACAGTAAGCAAAAGACGAATAAGAGTAAA
GGACAAGGAAGACATTTCTGAGCGTTACCAGAGGGACATACAGACACTCCTCCTGCAGGTGGAA
GCACTTCAGGCCCAGCTGGGAGAGCAGACAAAGCTTTCTAGAGAACAAGTCGAAGGGCTCATGG
AGGACAGACGGATCCGAATCGAGGAGATCCAAGTTCAGCACCAGAGAAATCAAGAGAAAATCAA
AGAGCTGACCAAGAGTCTCCATCATACCCAAGAACTGCTCTACCAGAGCACCAAAGACTTTCTA
CAACTAAAATTTGAAAACCAAAATAAAGAGAAGTTGTGGATGCTTGAAAGAGACCACCTGATGT
CAGTGATGAAGCAGCACAGAGCGCAGTACAGGAAGAAAGAAGACAAGCTTGGGAAAGTCGTTCC
CACTTTACATGAGAATCATCATGCTCAGAATGAGTATGTGAAGTCTCTTAAGGATAAGCTAACA
CAAGAGAAAAAGCTGTCCAACATGTACCAAGAACAGTGCATTTCCCTAGAAGAGGAACTTGCTC
GAATTCGGGAGGAAGAAGGAGTGAGGAGAGAGATCTTCAAGGATCGCTCCAACAAGATGGGCAA
GCGCTTACAGATAATGACAAGACGCTATCAGGCCTTGGAGCATCGACGAATCCTGGAAGTAGAG
GGCTTCAAGACAGACATTAAGGCTCTCCGACAGAAGCTGAGAGACCTGGAGCAAACGCTCTATA
AGGCAACCATGAACACCCATGGAAATCAGGATCTGGCCATTCTGTGTGAAGTCCGTGATAGCAA
CAGGAGAGCTCATAAGATACAAGGAGAGCTGAAGAGCCTCAAGTCTAAAATGTTCAGTCTAGAG
AATGAGCTTAGGCTGTGTTGATGTCTCCTTTCAGGGTTGGTTTCCAGAAACCTGAGGCAAGGTC
ACCTGTTCCTGGAGAGTGGACATGGAGTTGTCCAGAGTAGTGACATCAGTTTTAATGAAGATAG
TGTTAAAGGCATGATAGCTCACACCTACAATCCCAGCACTTGGGAAACTGAGCCAGGTGGATCT
CTCTGATTCTAGACCATCCAAGGCTACTTAATAAGACCCCATCTCCAAAAACAACAAAAATAAA
ACATCAAAACCAGAGAGGAAAGAAGAAAACCAGAAAACAGTGGCAAATCTGGCCCTGGGAAAGC
TGCACTAGCAGACTGCCGTCTCCGGTGGCCCTGCTCGCCTCACTGGGGGTAGGAACTGTGGCCG
AGACTTTCCTGCTCTTCCATTGTATATGGATGGACTTTCCTGTCTATAAAGTCAGTGATGGGAT
GTAACTTACCTGGGGAAGTGCTTGTCCACCGTACGGAAAGCCCGGGTTCTGTTGCTAGCACCAC
CTAAAGCCAGGGTTGGTGGCTCCCTGCAGTCACCACTGGAAAGAGAAGTATGTAGGAGAATCTG
AAGTTCACATTCACCCTTGGCTGTGTGGTGAGTTCCAGGCTAGCCTGGGCTACATAAGACCGTG
TCTAAAAATGAAAACAAGAAACAAACAAAAACAAGAAAACAAACTAAGTGCCAGTGGGAGAACA
TGTTTCCAGGAGGGCCAAAGTCATTCACTAAAGTGCATTCCTACTCAGGGAAGGAAGGAAGCAG
CAAATTACATGGGCAGATTCACGGACTTAGCTGTGCCCAAGTGACTGACCACCAGGGGGCAGCA
GAGCCCTTGCTCCTCAGTAAACTTGGTCATCAAGAAAAGGGTGCTACTTTATGTACAGTAGGCA
AAACCAATATGGTAATTTATGTGAAGAAGTTTAACATTTTATCAATATTTTTTAGATTATTCAA
ATTAATATTTTCAATAAAATGTAGTGTTTAAAACA

hide sequence

RefSeq Acc Id:

XM_006237243 ⟹ XP_006237305

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,206,402 - 155,236,507 (-)	NCBI
mRatBN7.2	4	153,534,220 - 153,561,785 (-)	NCBI
Rnor_6.0	4	152,860,669 - 152,890,802 (-)	NCBI
Rnor_5.0	4	219,949,764 - 219,981,609 (-)	NCBI

Sequence:

show sequence

TTGAAAGCAAAAGAAGCAACTTTTACAGGAAAAATAAATTCAAGTAAATGGAGGATAAACACAT
TCCAAGTATGACATATTTATCTGTAACTTACCAGTGTTAGGGTAGAATGAAATTAATACCTAAG
TCTGGTAATTATTTGGCAAGGCTATGAGAGATGGCCTCTGATGTCTTTCATTTTACCTTTGAGC
CAGGGTCTCCCTGTTCCGTTCAGACTCTTACTGTGCTGGACTCAGATGATCTTCCTGTCTCAGC
TCTGGAACTACACTGAGAAACTACACTTCCCAGGAACCTCTGCCGGTGAGGCGCAAGGCAAGGT
GGGAAGAGCTGCTGGATGAACAACCGTCCTATTGGTGTGCAACCTGAAAGGCCGCCTGAGCTCG
TGAGCGATTGAATAACAGTTGCCTCCAGGCGCGGTGCTGGCTCTGGCTTTGATGATACCAACAG
GTGGAAGAAAATGGCAGACTCAGTGGAGTCAACTCCCCTGCCTTCAATAGAGGATCGTCTGGCT
GTCCTTCGCCCTTCTCAGGAGCTTCTGGAGTATTATCAGAAGAAGATGGCTAACTTTGAGGCAG
AGAATGAAGATGTGCTGAAGAAGTTAGAGCTCTACAGAGAAACTTGTGAAGAACAGCATAACCT
CGAGTGGAGCTTGCAGCAGAGAGAGGGAGAGATTGCTGAACTGCAGAGAGCCCTGAGCGACATG
CAGGTCTGCCTCTTCCAGGAAAGGGAGCATGTCCTACGACTCTACTCAGAGAATGACCGGCTAA
GGATCAGGGAGCTGGAGGACAAGAAAAAGATTCAGAATCTATTGGCTCTTGTGGGAACAGATAC
CGGCGAAGTGACCTATTTTCTTAAGGAGCCTCCTCACAAGGCCAGCATTCTCCAGAAGACTATC
CAGGCCGTAGATGTGTGTGAGCCTTCAGCTTCCAAAGCAGATCCTACAGTAAGCAAAAGACGAA
TAAGAGTAAAGGACAAGGAAGACATTTCTGAGCGTTACCAGAGGGACATACAGACACTCCTCCT
GCAGGTGGAAGCACTTCAGGCCCAGCTGGGAGAGCAGACAAAGCTTTCTAGAGAACAAGTCGAA
GGGCTCATGGAGGACAGACGGATCCGAATCGAGGAGATCCAAGTTCAGCACCAGAGAAATCAAG
AGAAAATCAAAGAGCTGACCAAGAGTCTCCATCATACCCAAGAACTGCTCTACCAGAGCACCAA
AGACTTTCTACAACTAAAATTTGAAAACCAAAATAAAGAGAAGTTGTGGATGCTTGAAAGAGAC
CACCTGATGTCAGTGATGAAGCAGCACAGAGCGCAGTACAGGAAGAAAGAAGACAAGCTTGGGA
AAGTCGTTCCCACTTTACATGAGAATCATCATGCTCAGAATGAGTATGTGAAGTCTCTTAAGGA
TAAGCTAACACAAGAGAAAAAGCTGTCCAACATGTACCAAGAACAGTGCATTTCCCTAGAAGAG
GAACTTGCTCGAATTCGGGAGGAAGAAGGAGTGAGGAGAGAGATCTTCAAGGATCGCTCCAACA
AGATGGGCAAGCGCTTACAGATAATGACAAGACGCTATCAGGCCTTGGAGCATCGACGAATCCT
GGAAGTAGAGGGCTTCAAGACAGACATTAAGGCTCTCCGACAGAAGCTGAGAGACCTGGAGCAA
ACGCTCTATAAGGCAACCATGAACACCCATGGAAATCAGGATCTGGCCATTCTGTGTGAAGTCC
GTGATAGCAACAGGAGAGCTCATAAGATACAAGGAGAGCTGAAGAGCCTCAAGTCTAAAATGTT
CAGTCTAGAGAATGAGCTTAGGCTGTGTTGATGTCTCCTTTCAGGGTTGGTTTCCAGAAACCTG
AGGCAAGGTCACCTGTTCCTGGAGAGTGGACATGGAGTTGTCCAGAGTAGTGACATCAGTTTTA
ATGAAGATAGTGTTAAAGGCATGATAGCTCACACCTACAATCCCAGCACTTGGGAAACTGAGCC
AGGTGGATCTCTCTGATTCTAGACCATCCAAGGCTACTTAATAAGACCCCATCTCCAAAAACAA
CAAAAATAAAACATCAAAACCAGAGAGGAAAGAAGAAAACCAGAAAACAGTGGCAAATCTGGCC
CTGGGAAAGCTGCACTAGCAGACTGCCGTCTCCGGTGGCCCTGCTCGCCTCACTGGGGGTAGGA
ACTGTGGCCGAGACTTTCCTGCTCTTCCATTGTATATGGATGGACTTTCCTGTCTATAAAGTCA
GTGATGGGATGTAACTTACCTGGGGAAGTGCTTGTCCACCGTACGGAAAGCCCGGGTTCTGTTG
CTAGCACCACCTAAAGCCAGGGTTGGTGGCTCCCTGCAGTCACCACTGGAAAGAGAAGTATGTA
GGAGAATCTGAAGTTCACATTCACCCTTGGCTGTGTGGTGAGTTCCAGGCTAGCCTGGGCTACA
TAAGACCGTGTCTAAAAATGAAAACAAGAAACAAACAAAAACAAGAAAACAAACTAAGTGCCAG
TGGGAGAACATGTTTCCAGGAGGGCCAAAGTCATTCACTAAAGTGCATTCCTACTCAGGGAAGG
AAGGAAGCAGCAAATTACATGGGCAGATTCACGGACTTAGCTGTGCCCAAGTGACTGACCACCA
GGGGGCAGCAGAGCCCTTGCTCCTCAGTAAACTTGGTCATCAAGAAAAGGGTGCTACTTTATGT
ACAGTAGGCAAAACCAATATGGTAATTTATGTGAAGAAGTTTAACATTTTATCAATATTTTTTA
GATTATTCAAATTAATATTTTCAATAAAATGTAGTGTTTAAAACA

hide sequence

RefSeq Acc Id:

XM_006237244 ⟹ XP_006237306

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,206,402 - 155,238,020 (-)	NCBI
mRatBN7.2	4	153,534,220 - 153,565,805 (-)	NCBI
Rnor_6.0	4	152,860,669 - 152,892,291 (-)	NCBI
Rnor_5.0	4	219,949,764 - 219,981,609 (-)	NCBI

Sequence:

show sequence

TCCTGTTCCTCTTTGTGTAGTGGGGGTGGGGACGACACGAAAACAAGAATAACAGTTGCCTCCA
GGCGCGGTGCTGGCTCTGGCTTTGATGATACCAACAGGTGGAAGAAAATGGCAGACTCAGTGGA
GTCAACTCCCCTGCCTTCAATAGAGGATCGTCTGGCTGTCCTTCGCCCTTCTCAGGAGCTTCTG
GAGTATTATCAGAAGAAGATGGCTAACTTTGAGGCAGAGAATGAAGATGTGCTGAAGAAGTTAG
AGCTCTACAGAGAAACTTGTGAAGAACAGCATAACCTCGAGTGGAGCTTGCAGCAGAGAGAGGG
AGAGATTGCTGAACTGCAGAGAGCCCTGAGCGACATGCAGGTCTGCCTCTTCCAGGAAAGGGAG
CATGTCCTACGACTCTACTCAGAGAATGACCGGCTAAGGATCAGGGAGCTGGAGGACAAGAAAA
AGATTCAGAATCTATTGGCTCTTGTGGGAACAGATACCGGCGAAGTGACCTATTTTCTTAAGGA
GCCTCCTCACAAGGCCAGCATTCTCCAGAAGACTATCCAGGCCGTAGATGTGTGTGAGCCTTCA
GCTTCCAAAGCAGATCCTACAGTAAGCAAAAGACGAATAAGAGTAAAGGACAAGGAAGACATTT
CTGAGCGTTACCAGAGGGACATACAGACACTCCTCCTGCAGGTGGAAGCACTTCAGGCCCAGCT
GGGAGAGCAGACAAAGCTTTCTAGAGAACAAGTCGAAGGGCTCATGGAGGACAGACGGATCCGA
ATCGAGGAGATCCAAGTTCAGCACCAGAGAAATCAAGAGAAAATCAAAGAGCTGACCAAGAGTC
TCCATCATACCCAAGAACTGCTCTACCAGAGCACCAAAGACTTTCTACAACTAAAATTTGAAAA
CCAAAATAAAGAGAAGTTGTGGATGCTTGAAAGAGACCACCTGATGTCAGTGATGAAGCAGCAC
AGAGCGCAGTACAGGAAGAAAGAAGACAAGCTTGGGAAAGTCGTTCCCACTTTACATGAGAATC
ATCATGCTCAGAATGAGTATGTGAAGTCTCTTAAGGATAAGCTAACACAAGAGAAAAAGCTGTC
CAACATGTACCAAGAACAGTGCATTTCCCTAGAAGAGGAACTTGCTCGAATTCGGGAGGAAGAA
GGAGTGAGGAGAGAGATCTTCAAGGATCGCTCCAACAAGATGGGCAAGCGCTTACAGATAATGA
CAAGACGCTATCAGGCCTTGGAGCATCGACGAATCCTGGAAGTAGAGGGCTTCAAGACAGACAT
TAAGGCTCTCCGACAGAAGCTGAGAGACCTGGAGCAAACGCTCTATAAGGCAACCATGAACACC
CATGGAAATCAGGATCTGGCCATTCTGTGTGAAGTCCGTGATAGCAACAGGAGAGCTCATAAGA
TACAAGGAGAGCTGAAGAGCCTCAAGTCTAAAATGTTCAGTCTAGAGAATGAGCTTAGGCTGTG
TTGATGTCTCCTTTCAGGGTTGGTTTCCAGAAACCTGAGGCAAGGTCACCTGTTCCTGGAGAGT
GGACATGGAGTTGTCCAGAGTAGTGACATCAGTTTTAATGAAGATAGTGTTAAAGGCATGATAG
CTCACACCTACAATCCCAGCACTTGGGAAACTGAGCCAGGTGGATCTCTCTGATTCTAGACCAT
CCAAGGCTACTTAATAAGACCCCATCTCCAAAAACAACAAAAATAAAACATCAAAACCAGAGAG
GAAAGAAGAAAACCAGAAAACAGTGGCAAATCTGGCCCTGGGAAAGCTGCACTAGCAGACTGCC
GTCTCCGGTGGCCCTGCTCGCCTCACTGGGGGTAGGAACTGTGGCCGAGACTTTCCTGCTCTTC
CATTGTATATGGATGGACTTTCCTGTCTATAAAGTCAGTGATGGGATGTAACTTACCTGGGGAA
GTGCTTGTCCACCGTACGGAAAGCCCGGGTTCTGTTGCTAGCACCACCTAAAGCCAGGGTTGGT
GGCTCCCTGCAGTCACCACTGGAAAGAGAAGTATGTAGGAGAATCTGAAGTTCACATTCACCCT
TGGCTGTGTGGTGAGTTCCAGGCTAGCCTGGGCTACATAAGACCGTGTCTAAAAATGAAAACAA
GAAACAAACAAAAACAAGAAAACAAACTAAGTGCCAGTGGGAGAACATGTTTCCAGGAGGGCCA
AAGTCATTCACTAAAGTGCATTCCTACTCAGGGAAGGAAGGAAGCAGCAAATTACATGGGCAGA
TTCACGGACTTAGCTGTGCCCAAGTGACTGACCACCAGGGGGCAGCAGAGCCCTTGCTCCTCAG
TAAACTTGGTCATCAAGAAAAGGGTGCTACTTTATGTACAGTAGGCAAAACCAATATGGTAATT
TATGTGAAGAAGTTTAACATTTTATCAATATTTTTTAGATTATTCAAATTAATATTTTCAATAA
AATGTAGTGTTTAAAACA

hide sequence

RefSeq Acc Id:

XM_008763245 ⟹ XP_008761467

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,206,402 - 155,234,339 (-)	NCBI
mRatBN7.2	4	153,534,191 - 153,561,786 (-)	NCBI
Rnor_6.0	4	152,860,669 - 152,888,271 (-)	NCBI

Sequence:

show sequence

AAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAGCAAAAAGTGTATCCCATCACCCTTGACCCA
AAACACATTTTAATGGCTCTCTCTTGTTTGCACATTTGTTGATAGAACCTGGTGCTGAATTCAG
ACTTCAGGAGCCAGGGTTTCTTAACGGAAACAAGAATTCTACCACTGAACTATACTTCCCCCAC
CCCCACGCCTGAGGCCAAGAATTTCCCAGGAGCTAATTAAAATAGAATAACAAAGGGAAAACTA
TAAACTCTCTCCTTATTCTTTCTTATGACATGAATAGGAAAAGGAATGTTATTTGAAATATGAC
ACTGAAAAATTGTGTACACTTATTGTGAGCCACTGAAGTTGACATAGGCGTGAAAGCTTCACTT
TTCAAGTTTTCCAAATTTTAAGGCAATGCTACTCCACAGTGCAGAATTATTCCTTTCTTGTGTA
GCTTCCTTTTATAGATCCTCTTTTGTTACTGAGACAGGGTTCCCCGACTAGTGTTGGGTTTAAA
GGCATGAGCTACCACTTTCAGTTCTTCATATATCCTCCCGATGTTTAAACTGGCTAGACATAAC
ATTTGAATATGTAATCTCTTGACTGGAGACATTGAACCCTACATCTAAGCCAAGTCATAGAAGT
TTCTTTCTCCCCCTTCCTCCTGTTTTGTCTTTTTGAGACCCACGCTTCTAAATTGCTATTTGGC
CGAGGAGTACCTTAAACTCCCCATCCTTTTTACTTCCCTAACCACGTATTGTGATCACAGGCTT
GTACAGCTCCATAGGATTTATGGAACTTTTCTTAGGCTCACTTGAAACAAATGACAAGGCACTC
TAAGGTATTCCTGTTATCCGCTCCTGATTATGTATGCCATTTATGCAACCGATTTCACTAAAGA
AAAGTAGTTAAGTAAGTGTAGACTGAGTTGTCAAAACGGATGAGTAATAACAACCAAGGAATAC
TTAACCCGTCCCCATCCACTCCGTACCCCGCCCCCATTCTGTCTTTGCGGAATGCCTCGTGCAG
TGAGAAACTACACTTCCCAGGAACCTCTGCCGGTGAGGCGCAAGGCAAGGTGGGAAGAGCTGCT
GGATGAACAACCGTCCTATTGGTGTGCAACCTGAAAGGCCGCCTGAGCTCGTGAGCGATTGGTA
GGATTTCGTAGACGCTCGCTGATTTGAGTTGTTTTTCCGTTGCGTTGTTGGATTCCAGGGGTTA
GTGCTTGGTATGAATAAGGCAGAATGAATTTTACTCCGACACATACACCCATCTGCAGAAAAAT
AACAGTTGCCTCCAGGCGCGGTGCTGGCTCTGGCTTTGATGATACCAACAGGTGGAAGAAAATG
GCAGACTCAGTGGAGTCAACTCCCCTGCCTTCAATAGAGGATCGTCTGGCTGTCCTTCGCCCTT
CTCAGGAGCTTCTGGAGTATTATCAGAAGAAGATGGCTAACTTTGAGGCAGAGAATGAAGATGT
GCTGAAGAAGTTAGAGCTCTACAGAGAAACTTGTGAAGAACAGCATAACCTCGAGTGGAGCTTG
CAGCAGAGAGAGGGAGAGATTGCTGAACTGCAGAGAGCCCTGAGCGACATGCAGGTCTGCCTCT
TCCAGGAAAGGGAGCATGTCCTACGACTCTACTCAGAGAATGACCGGCTAAGGATCAGGGAGCT
GGAGGACAAGAAAAAGATTCAGAATCTATTGGCTCTTGTGGGAACAGATACCGGCGAAGTGACC
TATTTTCTTAAGGAGCCTCCTCACAAGGCCAGCATTCTCCAGAAGACTATCCAGGCCGTAGATG
TGTGTGAGCCTTCAGCTTCCAAAGCAGATCCTACAGTAAGCAAAAGACGAATAAGAGTAAAGGA
CAAGGAAGACATTTCTGAGCGTTACCAGAGGGACATACAGACACTCCTCCTGCAGGTGGAAGCA
CTTCAGGCCCAGCTGGGAGAGCAGACAAAGCTTTCTAGAGAACAAGTCGAAGGGCTCATGGAGG
ACAGACGGATCCGAATCGAGGAGATCCAAGTTCAGCACCAGAGAAATCAAGAGAAAATCAAAGA
GCTGACCAAGAGTCTCCATCATACCCAAGAACTGCTCTACCAGAGCACCAAAGACTTTCTACAA
CTAAAATTTGAAAACCAAAATAAAGAGAAGTTGTGGATGCTTGAAAGAGACCACCTGATGTCAG
TGATGAAGCAGCACAGAGCGCAGTACAGGAAGAAAGAAGACAAGCTTGGGAAAGTCGTTCCCAC
TTTACATGAGAATCATCATGCTCAGAATGAGTATGTGAAGTCTCTTAAGGATAAGCTAACACAA
GAGAAAAAGCTGTCCAACATGTACCAAGAACAGTGCATTTCCCTAGAAGAGGAACTTGCTCGAA
TTCGGGAGGAAGAAGGAGTGAGGAGAGAGATCTTCAAGGATCGCTCCAACAAGATGGGCAAGCG
CTTACAGATAATGACAAGACGCTATCAGGCCTTGGAGCATCGACGAATCCTGGAAGTAGAGGGC
TTCAAGACAGACATTAAGGCTCTCCGACAGAAGCTGAGAGACCTGGAGCAAACGCTCTATAAGG
CAACCATGAACACCCATGGAAATCAGGATCTGGCCATTCTGTGTGAAGTCCGTGATAGCAACAG
GAGAGCTCATAAGATACAAGGAGAGCTGAAGAGCCTCAAGTCTAAAATGTTCAGTCTAGAGAAT
GAGCTTAGGCTGTGTTGATGTCTCCTTTCAGGGTTGGTTTCCAGAAACCTGAGGCAAGGTCACC
TGTTCCTGGAGAGTGGACATGGAGTTGTCCAGAGTAGTGACATCAGTTTTAATGAAGATAGTGT
TAAAGGCATGATAGCTCACACCTACAATCCCAGCACTTGGGAAACTGAGCCAGGTGGATCTCTC
TGATTCTAGACCATCCAAGGCTACTTAATAAGACCCCATCTCCAAAAACAACAAAAATAAAACA
TCAAAACCAGAGAGGAAAGAAGAAAACCAGAAAACAGTGGCAAATCTGGCCCTGGGAAAGCTGC
ACTAGCAGACTGCCGTCTCCGGTGGCCCTGCTCGCCTCACTGGGGGTAGGAACTGTGGCCGAGA
CTTTCCTGCTCTTCCATTGTATATGGATGGACTTTCCTGTCTATAAAGTCAGTGATGGGATGTA
ACTTACCTGGGGAAGTGCTTGTCCACCGTACGGAAAGCCCGGGTTCTGTTGCTAGCACCACCTA
AAGCCAGGGTTGGTGGCTCCCTGCAGTCACCACTGGAAAGAGAAGTATGTAGGAGAATCTGAAG
TTCACATTCACCCTTGGCTGTGTGGTGAGTTCCAGGCTAGCCTGGGCTACATAAGACCGTGTCT
AAAAATGAAAACAAGAAACAAACAAAAACAAGAAAACAAACTAAGTGCCAGTGGGAGAACATGT
TTCCAGGAGGGCCAAAGTCATTCACTAAAGTGCATTCCTACTCAGGGAAGGAAGGAAGCAGCAA
ATTACATGGGCAGATTCACGGACTTAGCTGTGCCCAAGTGACTGACCACCAGGGGGCAGCAGAG
CCCTTGCTCCTCAGTAAACTTGGTCATCAAGAAAAGGGTGCTACTTTATGTACAGTAGGCAAAA
CCAATATGGTAATTTATGTGAAGAAGTTTAACATTTTATCAATATTTTTTAGATTATTCAAATT
AATATTTTCAATAAAATGTAGTGTTTAAAACA

hide sequence

RefSeq Acc Id:

XM_008763246 ⟹ XP_008761468

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,206,402 - 155,238,009 (-)	NCBI
mRatBN7.2	4	153,534,187 - 153,565,814 (-)	NCBI
Rnor_6.0	4	152,860,669 - 152,892,295 (-)	NCBI

Sequence:

show sequence

TGGTTCCTGTTCCTCTTTGTGTAGTGGGGGTGGGGACGACACGAAAACAAGGGTCTCCCTGTTC
CGTTCAGACTCTTACTGTGCTGGACTCAGATGATCTTCCTGTCTCAGCTCTGGAACTACACAAT
AACAGTTGCCTCCAGGCGCGGTGCTGGCTCTGGCTTTGATGATACCAACAGGTGGAAGAAAATG
GCAGACTCAGTGGAGTCAACTCCCCTGCCTTCAATAGAGGATCGTCTGGCTGTCCTTCGCCCTT
CTCAGGAGCTTCTGGAGTATTATCAGAAGAAGATGGCTAACTTTGAGGCAGAGAATGAAGATGT
GCTGAAGAAGTTAGAGCTCTACAGAGAAACTTGTGAAGAACAGCATAACCTCGAGTGGAGCTTG
CAGCAGAGAGAGGGAGAGATTGCTGAACTGCAGAGAGCCCTGAGCGACATGCAGGTCTGCCTCT
TCCAGGAAAGGGAGCATGTCCTACGACTCTACTCAGAGAATGACCGGCTAAGGATCAGGGAGCT
GGAGGACAAGAAAAAGATTCAGAATCTATTGGCTCTTGTGGGAACAGATACCGGCGAAGTGACC
TATTTTCTTAAGGAGCCTCCTCACAAGGCCAGCATTCTCCAGAAGACTATCCAGGCCGTAGATG
TGTGTGAGCCTTCAGCTTCCAAAGCAGATCCTACAGTAAGCAAAAGACGAATAAGAGTAAAGGA
CAAGGAAGACATTTCTGAGCGTTACCAGAGGGACATACAGACACTCCTCCTGCAGGTGGAAGCA
CTTCAGGCCCAGCTGGGAGAGCAGACAAAGCTTTCTAGAGAACAAGTCGAAGGGCTCATGGAGG
ACAGACGGATCCGAATCGAGGAGATCCAAGTTCAGCACCAGAGAAATCAAGAGAAAATCAAAGA
GCTGACCAAGAGTCTCCATCATACCCAAGAACTGCTCTACCAGAGCACCAAAGACTTTCTACAA
CTAAAATTTGAAAACCAAAATAAAGAGAAGTTGTGGATGCTTGAAAGAGACCACCTGATGTCAG
TGATGAAGCAGCACAGAGCGCAGTACAGGAAGAAAGAAGACAAGCTTGGGAAAGTCGTTCCCAC
TTTACATGAGAATCATCATGCTCAGAATGAGTATGTGAAGTCTCTTAAGGATAAGCTAACACAA
GAGAAAAAGCTGTCCAACATGTACCAAGAACAGTGCATTTCCCTAGAAGAGGAACTTGCTCGAA
TTCGGGAGGAAGAAGGAGTGAGGAGAGAGATCTTCAAGGATCGCTCCAACAAGATGGGCAAGCG
CTTACAGATAATGACAAGACGCTATCAGGCCTTGGAGCATCGACGAATCCTGGAAGTAGAGGGC
TTCAAGACAGACATTAAGGCTCTCCGACAGAAGCTGAGAGACCTGGAGCAAACGCTCTATAAGG
CAACCATGAACACCCATGGAAATCAGGATCTGGCCATTCTGTGTGAAGTCCGTGATAGCAACAG
GAGAGCTCATAAGATACAAGGAGAGCTGAAGAGCCTCAAGTCTAAAATGTTCAGTCTAGAGAAT
GAGCTTAGGCTGTGTTGATGTCTCCTTTCAGGGTTGGTTTCCAGAAACCTGAGGCAAGGTCACC
TGTTCCTGGAGAGTGGACATGGAGTTGTCCAGAGTAGTGACATCAGTTTTAATGAAGATAGTGT
TAAAGGCATGATAGCTCACACCTACAATCCCAGCACTTGGGAAACTGAGCCAGGTGGATCTCTC
TGATTCTAGACCATCCAAGGCTACTTAATAAGACCCCATCTCCAAAAACAACAAAAATAAAACA
TCAAAACCAGAGAGGAAAGAAGAAAACCAGAAAACAGTGGCAAATCTGGCCCTGGGAAAGCTGC
ACTAGCAGACTGCCGTCTCCGGTGGCCCTGCTCGCCTCACTGGGGGTAGGAACTGTGGCCGAGA
CTTTCCTGCTCTTCCATTGTATATGGATGGACTTTCCTGTCTATAAAGTCAGTGATGGGATGTA
ACTTACCTGGGGAAGTGCTTGTCCACCGTACGGAAAGCCCGGGTTCTGTTGCTAGCACCACCTA
AAGCCAGGGTTGGTGGCTCCCTGCAGTCACCACTGGAAAGAGAAGTATGTAGGAGAATCTGAAG
TTCACATTCACCCTTGGCTGTGTGGTGAGTTCCAGGCTAGCCTGGGCTACATAAGACCGTGTCT
AAAAATGAAAACAAGAAACAAACAAAAACAAGAAAACAAACTAAGTGCCAGTGGGAGAACATGT
TTCCAGGAGGGCCAAAGTCATTCACTAAAGTGCATTCCTACTCAGGGAAGGAAGGAAGCAGCAA
ATTACATGGGCAGATTCACGGACTTAGCTGTGCCCAAGTGACTGACCACCAGGGGGCAGCAGAG
CCCTTGCTCCTCAGTAAACTTGGTCATCAAGAAAAGGGTGCTACTTTATGTACAGTAGGCAAAA
CCAATATGGTAATTTATGTGAAGAAGTTTAACATTTTATCAATATTTTTTAGATTATTCAAATT
AATATTTTCAATAAAATGTAGTGTTTAAAACA

hide sequence

RefSeq Acc Id:

XM_039107653 ⟹ XP_038963581

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,206,402 - 155,236,507 (-)	NCBI
mRatBN7.2	4	153,534,191 - 153,565,958 (-)	NCBI

RefSeq Acc Id:

XM_039107654 ⟹ XP_038963582

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,206,402 - 155,236,507 (-)	NCBI
mRatBN7.2	4	153,534,191 - 153,565,958 (-)	NCBI

RefSeq Acc Id:

XM_039107655 ⟹ XP_038963583

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,206,402 - 155,234,339 (-)	NCBI
mRatBN7.2	4	153,534,191 - 153,561,786 (-)	NCBI

RefSeq Acc Id:

XM_039107656 ⟹ XP_038963584

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,206,402 - 155,238,008 (-)	NCBI
mRatBN7.2	4	153,534,191 - 153,565,810 (-)	NCBI

RefSeq Acc Id:

XM_039107659 ⟹ XP_038963587

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,206,402 - 155,234,337 (-)	NCBI
mRatBN7.2	4	153,534,220 - 153,561,784 (-)	NCBI

RefSeq Acc Id:

XM_063286115 ⟹ XP_063142185

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,206,402 - 155,238,235 (-)	NCBI

RefSeq Acc Id:

XM_063286116 ⟹ XP_063142186

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,206,402 - 155,236,507 (-)	NCBI

RefSeq Acc Id:

XM_063286117 ⟹ XP_063142187

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,206,402 - 155,236,507 (-)	NCBI

RefSeq Acc Id:

XM_063286118 ⟹ XP_063142188

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,206,402 - 155,238,175 (-)	NCBI

RefSeq Acc Id:

XR_005503234

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,211,695 - 155,238,235 (-)	NCBI
mRatBN7.2	4	153,539,490 - 153,566,059 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001178681	(Get FASTA)	NCBI Sequence Viewer
	XP_006237298	(Get FASTA)	NCBI Sequence Viewer
	XP_006237300	(Get FASTA)	NCBI Sequence Viewer
	XP_006237301	(Get FASTA)	NCBI Sequence Viewer
	XP_006237302	(Get FASTA)	NCBI Sequence Viewer
	XP_006237305	(Get FASTA)	NCBI Sequence Viewer
	XP_006237306	(Get FASTA)	NCBI Sequence Viewer
	XP_008761467	(Get FASTA)	NCBI Sequence Viewer
	XP_008761468	(Get FASTA)	NCBI Sequence Viewer
	XP_038963581	(Get FASTA)	NCBI Sequence Viewer
	XP_038963582	(Get FASTA)	NCBI Sequence Viewer
	XP_038963583	(Get FASTA)	NCBI Sequence Viewer
	XP_038963584	(Get FASTA)	NCBI Sequence Viewer
	XP_038963587	(Get FASTA)	NCBI Sequence Viewer
	XP_063142185	(Get FASTA)	NCBI Sequence Viewer
	XP_063142186	(Get FASTA)	NCBI Sequence Viewer
	XP_063142187	(Get FASTA)	NCBI Sequence Viewer
	XP_063142188	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM02037	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000053046
	ENSRNOP00000053046.2
	ENSRNOP00000085428
	ENSRNOP00000085428.1
	ENSRNOP00000089671
	ENSRNOP00000089671.1
	ENSRNOP00000095525.1

RefSeq Acc Id:

NP_001178681 ⟸ NM_001191752

- UniProtKB:

D3ZHU5 (UniProtKB/TrEMBL), A0A8I6GIA6 (UniProtKB/TrEMBL), A6ILA2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MNFTPTHTPICRKITVASRRGAGSGFDDTNRWKKMADSVESTPLPSIEDRLAVLRPSQELLEYY
QKKMANFEAENEDVLKKLELYRETCEEQHNLEWSLQQREGEIAELQRALSDMQVCLFQEREHVL
RLYSENDRLRIRELEDKKKIQNLLALVGTDTGEVTYFLKEPPHKASILQKTIQAVDVCEPSASK
ADPTVSKRRIRVKDKEDISERYQRDIQTLLLQVEALQAQLGEQTKLSREQVEGLMEDRRIRIEE
IQVQHQRNQEKIKELTKSLHHTQELLYQSTKDFLQLKFENQNKEKLWMLERDHLMSVMKQHRAQ
YRKKEDKLGKVVPTLHENHHAQNEYVKSLKDKLTQEKKLSNMYQEQCISLEEELARIREEEGVR
REIFKDRSNKMGKRLQIMTRRYQALEHRRILEVEGFKTDIKALRQKLRDLEQTLYKATMNTHGN
QDLAILCEVRDSNRRAHKIQGELKSLKSKMFSLENELRLC

hide sequence

RefSeq Acc Id:	XP_006237298 ⟸ XM_006237236
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6GCW0 (UniProtKB/TrEMBL), D3ZHU5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTAGVPFFLSLPVKVLHSPSTLGAWPLMAPRPLLERRGRSYPARWNALFRRAEECVMPQRAEVV LPGLPVPFRLLLCWTQMIFLSQLWNYTITVASRRGAGSGFDDTNRWKKMADSVESTPLPSIEDR LAVLRPSQELLEYYQKKMANFEAENEDVLKKLELYRETCEEQHNLEWSLQQREGEIAELQRALS DMQVCLFQEREHVLRLYSENDRLRIRELEDKKKIQNLLALVGTDTGEVTYFLKEPPHKASILQK TIQAVDVCEPSASKADPTVSKRRIRVKDKEDISERYQRDIQTLLLQVEALQAQLGEQTKLSREQ VEGLMEDRRIRIEEIQVQHQRNQEKIKELTKSLHHTQELLYQSTKDFLQLKFENQNKEKLWMLE RDHLMSVMKQHRAQYRKKEDKLGKVVPTLHENHHAQNEYVKSLKDKLTQEKKLSNMYQEQCISL EEELARIREEEGVRREIFKDRSNKMGKRLQIMTRRYQALEHRRILEVEGFKTDIKALRQKLRDL EQTLYKATMNTHGNQDLAILCEVRDSNRRAHKIQGELKSLKSKMFSLENELRLC hide sequence

RefSeq Acc Id:	XP_006237306 ⟸ XM_006237244
- Peptide Label:	isoform X5
- UniProtKB:	D3ZHU5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADSVESTPLPSIEDRLAVLRPSQELLEYYQKKMANFEAENEDVLKKLELYRETCEEQHNLEWS LQQREGEIAELQRALSDMQVCLFQEREHVLRLYSENDRLRIRELEDKKKIQNLLALVGTDTGEV TYFLKEPPHKASILQKTIQAVDVCEPSASKADPTVSKRRIRVKDKEDISERYQRDIQTLLLQVE ALQAQLGEQTKLSREQVEGLMEDRRIRIEEIQVQHQRNQEKIKELTKSLHHTQELLYQSTKDFL QLKFENQNKEKLWMLERDHLMSVMKQHRAQYRKKEDKLGKVVPTLHENHHAQNEYVKSLKDKLT QEKKLSNMYQEQCISLEEELARIREEEGVRREIFKDRSNKMGKRLQIMTRRYQALEHRRILEVE GFKTDIKALRQKLRDLEQTLYKATMNTHGNQDLAILCEVRDSNRRAHKIQGELKSLKSKMFSLE NELRLC hide sequence

RefSeq Acc Id:	XP_006237301 ⟸ XM_006237239
- Peptide Label:	isoform X3
- UniProtKB:	D3ZHU5 (UniProtKB/TrEMBL), A0A8I6GIA6 (UniProtKB/TrEMBL), A6ILA2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNFTPTHTPICRKITVASRRGAGSGFDDTNRWKKMADSVESTPLPSIEDRLAVLRPSQELLEYY QKKMANFEAENEDVLKKLELYRETCEEQHNLEWSLQQREGEIAELQRALSDMQVCLFQEREHVL RLYSENDRLRIRELEDKKKIQNLLALVGTDTGEVTYFLKEPPHKASILQKTIQAVDVCEPSASK ADPTVSKRRIRVKDKEDISERYQRDIQTLLLQVEALQAQLGEQTKLSREQVEGLMEDRRIRIEE IQVQHQRNQEKIKELTKSLHHTQELLYQSTKDFLQLKFENQNKEKLWMLERDHLMSVMKQHRAQ YRKKEDKLGKVVPTLHENHHAQNEYVKSLKDKLTQEKKLSNMYQEQCISLEEELARIREEEGVR REIFKDRSNKMGKRLQIMTRRYQALEHRRILEVEGFKTDIKALRQKLRDLEQTLYKATMNTHGN QDLAILCEVRDSNRRAHKIQGELKSLKSKMFSLENELRLC hide sequence

RefSeq Acc Id:	XP_006237300 ⟸ XM_006237238
- Peptide Label:	isoform X3
- UniProtKB:	D3ZHU5 (UniProtKB/TrEMBL), A0A8I6GIA6 (UniProtKB/TrEMBL), A6ILA2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNFTPTHTPICRKITVASRRGAGSGFDDTNRWKKMADSVESTPLPSIEDRLAVLRPSQELLEYY QKKMANFEAENEDVLKKLELYRETCEEQHNLEWSLQQREGEIAELQRALSDMQVCLFQEREHVL RLYSENDRLRIRELEDKKKIQNLLALVGTDTGEVTYFLKEPPHKASILQKTIQAVDVCEPSASK ADPTVSKRRIRVKDKEDISERYQRDIQTLLLQVEALQAQLGEQTKLSREQVEGLMEDRRIRIEE IQVQHQRNQEKIKELTKSLHHTQELLYQSTKDFLQLKFENQNKEKLWMLERDHLMSVMKQHRAQ YRKKEDKLGKVVPTLHENHHAQNEYVKSLKDKLTQEKKLSNMYQEQCISLEEELARIREEEGVR REIFKDRSNKMGKRLQIMTRRYQALEHRRILEVEGFKTDIKALRQKLRDLEQTLYKATMNTHGN QDLAILCEVRDSNRRAHKIQGELKSLKSKMFSLENELRLC hide sequence

RefSeq Acc Id:	XP_006237302 ⟸ XM_006237240
- Peptide Label:	isoform X3
- UniProtKB:	D3ZHU5 (UniProtKB/TrEMBL), A0A8I6GIA6 (UniProtKB/TrEMBL), A6ILA2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNFTPTHTPICRKITVASRRGAGSGFDDTNRWKKMADSVESTPLPSIEDRLAVLRPSQELLEYY QKKMANFEAENEDVLKKLELYRETCEEQHNLEWSLQQREGEIAELQRALSDMQVCLFQEREHVL RLYSENDRLRIRELEDKKKIQNLLALVGTDTGEVTYFLKEPPHKASILQKTIQAVDVCEPSASK ADPTVSKRRIRVKDKEDISERYQRDIQTLLLQVEALQAQLGEQTKLSREQVEGLMEDRRIRIEE IQVQHQRNQEKIKELTKSLHHTQELLYQSTKDFLQLKFENQNKEKLWMLERDHLMSVMKQHRAQ YRKKEDKLGKVVPTLHENHHAQNEYVKSLKDKLTQEKKLSNMYQEQCISLEEELARIREEEGVR REIFKDRSNKMGKRLQIMTRRYQALEHRRILEVEGFKTDIKALRQKLRDLEQTLYKATMNTHGN QDLAILCEVRDSNRRAHKIQGELKSLKSKMFSLENELRLC hide sequence

RefSeq Acc Id:	XP_006237305 ⟸ XM_006237243
- Peptide Label:	isoform X5
- UniProtKB:	D3ZHU5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADSVESTPLPSIEDRLAVLRPSQELLEYYQKKMANFEAENEDVLKKLELYRETCEEQHNLEWS LQQREGEIAELQRALSDMQVCLFQEREHVLRLYSENDRLRIRELEDKKKIQNLLALVGTDTGEV TYFLKEPPHKASILQKTIQAVDVCEPSASKADPTVSKRRIRVKDKEDISERYQRDIQTLLLQVE ALQAQLGEQTKLSREQVEGLMEDRRIRIEEIQVQHQRNQEKIKELTKSLHHTQELLYQSTKDFL QLKFENQNKEKLWMLERDHLMSVMKQHRAQYRKKEDKLGKVVPTLHENHHAQNEYVKSLKDKLT QEKKLSNMYQEQCISLEEELARIREEEGVRREIFKDRSNKMGKRLQIMTRRYQALEHRRILEVE GFKTDIKALRQKLRDLEQTLYKATMNTHGNQDLAILCEVRDSNRRAHKIQGELKSLKSKMFSLE NELRLC hide sequence

RefSeq Acc Id:	XP_008761468 ⟸ XM_008763246
- Peptide Label:	isoform X4
- UniProtKB:	D3ZHU5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIFLSQLWNYTITVASRRGAGSGFDDTNRWKKMADSVESTPLPSIEDRLAVLRPSQELLEYYQK KMANFEAENEDVLKKLELYRETCEEQHNLEWSLQQREGEIAELQRALSDMQVCLFQEREHVLRL YSENDRLRIRELEDKKKIQNLLALVGTDTGEVTYFLKEPPHKASILQKTIQAVDVCEPSASKAD PTVSKRRIRVKDKEDISERYQRDIQTLLLQVEALQAQLGEQTKLSREQVEGLMEDRRIRIEEIQ VQHQRNQEKIKELTKSLHHTQELLYQSTKDFLQLKFENQNKEKLWMLERDHLMSVMKQHRAQYR KKEDKLGKVVPTLHENHHAQNEYVKSLKDKLTQEKKLSNMYQEQCISLEEELARIREEEGVRRE IFKDRSNKMGKRLQIMTRRYQALEHRRILEVEGFKTDIKALRQKLRDLEQTLYKATMNTHGNQD LAILCEVRDSNRRAHKIQGELKSLKSKMFSLENELRLC hide sequence

RefSeq Acc Id:	XP_008761467 ⟸ XM_008763245
- Peptide Label:	isoform X3
- UniProtKB:	D3ZHU5 (UniProtKB/TrEMBL), A0A8I6GIA6 (UniProtKB/TrEMBL), A6ILA2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNFTPTHTPICRKITVASRRGAGSGFDDTNRWKKMADSVESTPLPSIEDRLAVLRPSQELLEYY QKKMANFEAENEDVLKKLELYRETCEEQHNLEWSLQQREGEIAELQRALSDMQVCLFQEREHVL RLYSENDRLRIRELEDKKKIQNLLALVGTDTGEVTYFLKEPPHKASILQKTIQAVDVCEPSASK ADPTVSKRRIRVKDKEDISERYQRDIQTLLLQVEALQAQLGEQTKLSREQVEGLMEDRRIRIEE IQVQHQRNQEKIKELTKSLHHTQELLYQSTKDFLQLKFENQNKEKLWMLERDHLMSVMKQHRAQ YRKKEDKLGKVVPTLHENHHAQNEYVKSLKDKLTQEKKLSNMYQEQCISLEEELARIREEEGVR REIFKDRSNKMGKRLQIMTRRYQALEHRRILEVEGFKTDIKALRQKLRDLEQTLYKATMNTHGN QDLAILCEVRDSNRRAHKIQGELKSLKSKMFSLENELRLC hide sequence

RefSeq Acc Id:

ENSRNOP00000053046 ⟸ ENSRNOT00000056200

RefSeq Acc Id:	XP_038963582 ⟸ XM_039107654
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6GIA6 (UniProtKB/TrEMBL), A6ILA2 (UniProtKB/TrEMBL), D3ZHU5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963581 ⟸ XM_039107653
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6GIA6 (UniProtKB/TrEMBL), A6ILA2 (UniProtKB/TrEMBL), D3ZHU5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963584 ⟸ XM_039107656
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6GIA6 (UniProtKB/TrEMBL), A6ILA2 (UniProtKB/TrEMBL), D3ZHU5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963583 ⟸ XM_039107655
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6GIA6 (UniProtKB/TrEMBL), A6ILA2 (UniProtKB/TrEMBL), D3ZHU5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963587 ⟸ XM_039107659
- Peptide Label:	isoform X5
- UniProtKB:	D3ZHU5 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSRNOP00000095525 ⟸ ENSRNOT00000114158

RefSeq Acc Id:

ENSRNOP00000089671 ⟸ ENSRNOT00000100367

RefSeq Acc Id:

ENSRNOP00000085428 ⟸ ENSRNOT00000112339

RefSeq Acc Id:	XP_063142185 ⟸ XM_063286115
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063142188 ⟸ XM_063286118
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063142186 ⟸ XM_063286116
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063142187 ⟸ XM_063286117
- Peptide Label:	isoform X3

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZHU5-F1-model_v2	AlphaFold	D3ZHU5	1-488	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310710	AgrOrtholog
BioCyc Gene	G2FUF-43201	BioCyc
Ensembl Genes	ENSRNOG00000037206	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000056200	ENTREZGENE
	ENSRNOT00000056200.3	UniProtKB/TrEMBL
	ENSRNOT00000100367.1	UniProtKB/TrEMBL
	ENSRNOT00000112339.1	UniProtKB/TrEMBL
	ENSRNOT00000114158.1	UniProtKB/TrEMBL
InterPro	CCDC77	UniProtKB/TrEMBL
KEGG Report	rno:312677	UniProtKB/TrEMBL
NCBI Gene	312677	ENTREZGENE
PANTHER	COILED-COIL DOMAIN-CONTAINING PROTEIN 77	UniProtKB/TrEMBL
	PTHR22091	UniProtKB/TrEMBL
PhenoGen	Ccdc77	PhenoGen
RatGTEx	ENSRNOG00000037206	RatGTEx
UniProt	A0A8I6GCW0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GIA6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GL67_RAT	UniProtKB/TrEMBL
	A6ILA2	ENTREZGENE, UniProtKB/TrEMBL
	D3ZHU5	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-02-27	Ccdc77	coiled-coil domain containing 77	RGD1310710_predicted	similar to RIKEN cDNA 2700091N06 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	RGD1310710_predicted	similar to RIKEN cDNA 2700091N06 (predicted)	LOC312677_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC312677_predicted	similar to RIKEN cDNA 2700091N06 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar