Rtf1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 3 | 127,113,171 - 127,172,761 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 106,659,363 - 106,718,956 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 106,659,308 - 106,718,970 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 110,334,665 - 110,394,261 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 118,930,212 - 118,989,808 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 116,590,599 - 116,650,201 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 111,478,350 - 111,537,941 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 111,478,382 - 111,537,941 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 118,026,851 - 118,086,227 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 106,190,937 - 106,250,416 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 106,086,988 - 106,144,350 (+) | NCBI | | | | | Celera | 3 | 105,570,654 - 105,629,853 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q35 | NCBI | | | | |
|
RTF1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 15 | 41,417,095 - 41,483,563 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 15 | 41,408,408 - 41,483,563 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 15 | 41,709,293 - 41,775,761 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 15 | 39,496,608 - 39,563,049 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 15 | 39,496,643 - 39,562,470 | NCBI | | | | | Celera | 15 | 18,477,273 - 18,543,722 (+) | NCBI | | Celera | | | Cytogenetic Map | 15 | q15.1 | NCBI | | | | | HuRef | 15 | 18,557,815 - 18,624,156 (+) | NCBI | | HuRef | | | CHM1_1 | 15 | 41,827,411 - 41,894,383 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 15 | 39,223,257 - 39,289,730 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Rtf1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 2 | 119,505,549 - 119,565,888 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 119,505,549 - 119,565,888 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 119,675,068 - 119,735,407 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 119,675,068 - 119,735,407 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 119,500,804 - 119,561,143 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 119,366,509 - 119,426,868 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 120,832,949 - 120,891,714 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | E5 | NCBI | | | | | cM Map | 2 | 59.97 | NCBI | | | | |
|
Rtf1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955416 | 8,237,439 - 8,293,802 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955416 | 8,237,439 - 8,293,802 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
RTF1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 16 | 30,656,499 - 30,724,143 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 15 | 34,807,736 - 34,875,377 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 15 | 20,355,927 - 20,424,153 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 15 | 38,599,107 - 38,664,968 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 15 | 38,599,163 - 38,662,100 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
RTF1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 30 | 8,468,001 - 8,524,712 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 30 | 8,467,761 - 8,522,874 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 30 | 8,527,100 - 8,583,598 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 30 | 8,602,619 - 8,658,990 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 30 | 8,602,604 - 8,658,988 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 30 | 8,524,088 - 8,580,315 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 30 | 8,631,610 - 8,687,743 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 30 | 8,762,810 - 8,819,481 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Rtf1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024408640 | 86,921,991 - 86,981,499 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936471 | 4,770,063 - 4,829,578 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936471 | 4,770,060 - 4,829,562 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
RTF1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 1 | 129,886,800 - 129,943,181 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 129,886,798 - 129,942,845 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 144,958,162 - 145,015,973 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
RTF1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 26 | 41,523,610 - 41,589,014 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 26 | 41,522,542 - 41,588,948 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666048 | 99,390,075 - 99,458,121 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Rtf1 (Heterocephalus glaber - naked mole-rat) |
|