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Gene: Nfrkb (nuclear factor related to kappa B binding protein) Rattus norvegicus

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Symbol:

Nfrkb

Name:

nuclear factor related to kappa B binding protein

RGD ID:

1310558

Description:

Predicted to enable protease binding activity. Predicted to be involved in several processes, including regulation of embryonic development; regulation of nucleobase-containing compound metabolic process; and telomere maintenance. Predicted to be located in nucleus. Predicted to be part of Ino80 complex. Orthologous to human NFRKB (nuclear factor related to kappaB binding protein); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acrylamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC315523; nuclear factor related to kappa-B-binding protein; nuclear factor related to kappaB binding protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	38,089,574 - 38,121,506 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	38,089,999 - 38,121,501 (+)	Ensembl				GRCr8
mRatBN7.2	8	29,831,802 - 29,863,360 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	29,831,812 - 29,863,359 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	33,900,511 - 33,932,132 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	32,194,903 - 32,226,523 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	30,062,922 - 30,094,466 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	32,530,412 - 32,561,955 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	32,530,412 - 32,561,955 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	32,555,212 - 32,586,756 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	31,144,717 - 31,176,261 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	31,292,880 - 31,324,404 (+)	NCBI		Celera
RGSC_v3.1	8	31,156,280 - 31,184,016 (+)	NCBI
Cytogenetic Map	8	q13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4-hydroxynon-2-enal (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

butanal (ISO)

C60 fullerene (EXP)

caffeine (ISO)

CGP 52608 (ISO)

chlordecone (ISO)

copper atom (EXP)

copper(0) (EXP)

coumarin (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

diquat (ISO)

dorsomorphin (ISO)

entinostat (ISO)

enzyme inhibitor (ISO)

folic acid (ISO)

FR900359 (ISO)

gentamycin (EXP)

hydrogen peroxide (ISO)

lead(0) (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methapyrilene (EXP,ISO)

methimazole (EXP)

ozone (ISO)

pirinixic acid (ISO)

pregnenolone 16alpha-carbonitrile (EXP)

quercitrin (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

sunitinib (ISO)

T-2 toxin (EXP)

tetraphene (ISO)

titanium dioxide (ISO)

tungsten (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

chromatin remodeling (IEA,ISO)

positive regulation of DNA repair (IEA,ISO)

positive regulation of DNA-templated transcription (IEA,ISO)

positive regulation of macromolecule metabolic process (IEA)

positive regulation of telomere maintenance in response to DNA damage (IEA,ISO)

regulation of cell cycle (IEA,ISO)

regulation of chromosome organization (IEA,ISO)

regulation of DNA metabolic process (IEA)

regulation of DNA repair (IEA,ISO)

regulation of DNA replication (IEA,ISO)

regulation of DNA strand elongation (IEA,ISO)

regulation of embryonic development (IEA,ISO)

telomere maintenance (IEA,ISO)

Cellular Component

Ino80 complex (IEA,ISO)

nucleoplasm (IEA,ISO)

nucleus (IEA,ISO)

Molecular Function

DNA binding (IEA)

protease binding (IBA,IEA,ISO)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

INO80 family mediated chromatin remodeling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
3.	Comprehensive gene review and curation	RGD comprehensive gene curation
4.	The INO80 family of chromatin-remodeling enzymes: regulators of histone variant dynamics.	Watanabe S and Peterson CL, Cold Spring Harb Symp Quant Biol. 2010;75:35-42. doi: 10.1101/sqb.2010.75.063. Epub 2011 Apr 18.

Additional References at PubMed

PMID:18922472	PMID:21303910

Genomics

Comparative Map Data

Nfrkb
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	38,089,574 - 38,121,506 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	38,089,999 - 38,121,501 (+)	Ensembl				GRCr8
mRatBN7.2	8	29,831,802 - 29,863,360 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	29,831,812 - 29,863,359 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	33,900,511 - 33,932,132 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	32,194,903 - 32,226,523 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	30,062,922 - 30,094,466 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	32,530,412 - 32,561,955 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	32,530,412 - 32,561,955 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	32,555,212 - 32,586,756 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	31,144,717 - 31,176,261 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	31,292,880 - 31,324,404 (+)	NCBI		Celera
RGSC_v3.1	8	31,156,280 - 31,184,016 (+)	NCBI
Cytogenetic Map	8	q13	NCBI

NFRKB
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	129,863,636 - 129,895,578 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	129,863,636 - 129,895,590 (-)	Ensembl			hg38	GRCh38
GRCh37	11	129,733,531 - 129,765,473 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	129,239,568 - 129,268,114 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	11	129,239,574 - 129,268,114	NCBI
Celera	11	126,901,823 - 126,933,652 (-)	NCBI		Celera
Cytogenetic Map	11	q24.3	NCBI
HuRef	11	125,685,954 - 125,717,786 (-)	NCBI		HuRef
CHM1_1	11	129,619,262 - 129,651,095 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	129,899,341 - 129,931,605 (-)	NCBI		T2T-CHM13v2.0

Nfrkb
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	31,297,476 - 31,332,629 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	31,297,488 - 31,332,629 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	9	31,386,162 - 31,421,333 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	31,386,192 - 31,421,333 (+)	Ensembl			mm10	GRCm38
MGSCv37	9	31,193,777 - 31,228,918 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	9	31,135,778 - 31,170,898 (+)	NCBI		MGSCv36	mm8
Celera	9	28,647,176 - 28,682,323 (+)	NCBI		Celera
Cytogenetic Map	9	A4	NCBI
cM Map	9	16.86	NCBI

Nfrkb
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955412	30,813,769 - 30,849,001 (-)	Ensembl
ChiLan1.0	NW_004955412	30,817,151 - 30,848,992 (-)	NCBI	ChiLan1.0	ChiLan1.0

NFRKB
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	130,545,293 - 130,577,180 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	131,655,426 - 131,687,302 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	124,676,456 - 124,708,349 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	128,572,240 - 128,603,805 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	128,572,240 - 128,601,779 (-)	Ensembl			panPan2	panpan1.1

NFRKB
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	4,944,278 - 4,982,377 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	4,946,893 - 4,980,996 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	5,003,803 - 5,042,799 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	4,901,507 - 4,940,392 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	4,901,545 - 4,940,396 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	4,966,970 - 5,002,430 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	4,945,914 - 4,984,789 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	4,973,932 - 5,012,705 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Nfrkb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	111,979,867 - 112,014,548 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936572	2,435,847 - 2,471,655 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936572	2,435,875 - 2,468,848 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NFRKB
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	56,614,227 - 56,656,056 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	9	56,616,865 - 56,656,068 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	62,782,480 - 62,795,887 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NFRKB
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	120,935,175 - 120,968,053 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	120,936,104 - 120,968,005 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666043	5,126,292 - 5,158,917 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Nfrkb
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624812	4,249,350 - 4,280,182 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624812	4,248,077 - 4,282,948 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Nfrkb
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	8	27,109,618 - 27,141,439 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Nfrkb
982 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	711
Count of miRNA genes:	294
Interacting mature miRNAs:	388
Transcripts:	ENSRNOT00000011223
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357398	Slep3	Serum leptin concentration QTL 3	3.43		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	8	17994105	50763951	Rat
1358896	Bp262	Blood pressure QTL 262	2.89		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	35464071	107982864	Rat
2317030	Wbc5	White blood cell count QTL 5	3.21	0.005	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	8	16994642	61994642	Rat
2302278	Gluco36	Glucose level QTL 36	4.2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	8	37760859	58991895	Rat
12880044	Am9	Aortic mass QTL 9		0.007	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	8	10382540	55382540	Rat
631648	Stl5	Serum triglyceride level QTL 5	4	0.0003	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	8	35464071	71842899	Rat
724514	Uae15	Urinary albumin excretion QTL 15	2.9		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	37760859	61459705	Rat
2317032	Ginf2	Gastrointestinal inflammation QTL 2	3.21	0.005	liver integrity trait (VT:0010547)	liver granuloma severity score (CMO:0002157)	8	12964165	57964165	Rat
2301416	Bp315	Blood pressure QTL 315		0.008	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	15952279	60952279	Rat
631842	Inf1	Infertility severity QTL 1	4.1	0.001	seminal gland mass (VT:0010524)	seminal vesicle wet weight (CMO:0001603)	8	31543661	76543661	Rat
2317036	Livw3	Liver weight QTL 3	2.43	0.01	liver mass (VT:0003402)	liver weight to body weight ratio (CMO:0000633)	8	12964165	57964165	Rat
1358907	Cm40	Cardiac mass QTL 40	1.89		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	35464071	107982864	Rat
1598824	Memor4	Memory QTL 4	2.5		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	8	17993862	62252873	Rat
12880023	Bw184	Body weight QTL 184		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	8	10382540	55382540	Rat
12880028	Cm103	Cardiac mass QTL 103		0.02	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	8	10382540	55382540	Rat
2317051	Aia18	Adjuvant induced arthritis QTL 18	2.42		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	8	16994642	61994642	Rat
1358892	Kidm26	Kidney mass QTL 26	3.69		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	8	35464071	107982864	Rat
1359021	Bp271	Blood pressure QTL 271	1.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	34125902	55607752	Rat
2317048	Ginf1	Gastrointestinal inflammation QTL 1	3.52	0.005	cecum mucosa thickness (VT:0010234)	enterocolitis severity score (CMO:0002138)	8	12964165	57964165	Rat
2302367	Slep5	Serum leptin concentration QTL 5	3.43		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	8	17994105	50763951	Rat
12880025	Cm102	Cardiac mass QTL 102		0.044	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	8	10382540	55382540	Rat

Markers in Region

RH127359

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	29,862,856 - 29,863,038 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	32,561,453 - 32,561,634	NCBI	Rnor6.0
Rnor_5.0	8	32,586,253 - 32,586,434	UniSTS	Rnor5.0
RGSC_v3.4	8	31,175,759 - 31,175,940	UniSTS	RGSC3.4
Celera	8	31,323,902 - 31,324,083	UniSTS
RH 3.4 Map	8	215.1	UniSTS
Cytogenetic Map	8	q13	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	162	91	90	59	92	59	6	356	192	11	141	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108133	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436491	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436492	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436493	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436494	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436495	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436496	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436497	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436498	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436499	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436500	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242753	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242754	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242755	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242756	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242757	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242758	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242759	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242760	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242761	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265377	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265378	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265379	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265380	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265381	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265382	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265383	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265384	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265387	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265388	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265389	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265390	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265391	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265392	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265393	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265394	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265396	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265397	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265398	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265399	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000011223 ⟹ ENSRNOP00000011223

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	38,089,999 - 38,121,500 (+)	Ensembl
mRatBN7.2 Ensembl	8	29,831,812 - 29,863,359 (+)	Ensembl
Rnor_6.0 Ensembl	8	32,530,412 - 32,561,955 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000083659 ⟹ ENSRNOP00000071517

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	8	32,530,806 - 32,560,999 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000152725 ⟹ ENSRNOP00000101400

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	38,090,030 - 38,121,501 (+)	Ensembl

RefSeq Acc Id:

NM_001108133 ⟹ NP_001101603

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,089,962 - 38,121,506 (+)	NCBI
mRatBN7.2	8	29,831,812 - 29,863,359 (+)	NCBI
Rnor_6.0	8	32,530,412 - 32,561,955 (+)	NCBI
Rnor_5.0	8	32,555,212 - 32,586,756 (+)	NCBI
RGSC_v3.4	8	31,144,717 - 31,176,261 (+)	RGD
Celera	8	31,292,880 - 31,324,404 (+)	RGD

Sequence:

show sequence

GGTTCGCCCCTACAGGTCCCGCCCCTTCCGCTGCCGGAGCCCGGAACGTGCGCGCACCCAAACT
CCTTGCGGGAGCGAGCGCGTCCGGGAGCCCACGGCCGGACGAGCCCCGGTGTACCTGTGGAGAA
GAAACAATGGATTCCTTGGATCACATGCTGACAGATCCCCTAGAACTTGGTCCTTGTGGAGATG
GTCACAGTACAGGGATCATGGAGGACTGCCTTCTGGGTGGAACCAGGGTTAGTCTGCCTGAAGA
CCTGCTGGAGGATCCTGAAATATTCTTTGACGTCGTCAGCCTCTCCACATGGCAGGAAGTACTA
AGTGACTCTCAGCGTGAACATCTCCAGCAGTTTCTGCCGCAGTTTCCTACAGACACTGTAGAGC
AGCAGAATGAGCTCATCCTTGCCCTATTCAGTGGGGAGAACTTCCGCTTCGGAAACCCTCTGCA
CATCGCCCAGAAGCTCTTCCGAGATGGACACTTTAACCCTGAGGTGGTCAAGTATCGGCAGCTC
TGCTTCAAGTCACAGTACAAGCGGTACCTCAGCTCCCAACAGCAGTATTTCCACCGGCTGCTGA
GACAGATTCTTGCTTCCAGAAGTGATCTCCTGGAGATGGCTCGCACGAGCGGCCCGGCTCTTCC
CTTTCGACACAAGCACCATTCACCATCCCGAAGCCCGGAGGAGCGGGAGTGGCGGACCCAGCAG
CGTTACCTGAAAGTCTTGAGGGAAGTGAAGGAGGAGTGTGGCGACACTGCCCTGTCGTCTGATG
AGGAGGATCTCAGCTCATGGCTTCCAAGCTCTCCAGCACGCTCTCCTAGTCCTGCGGTGCCCCT
GAGGGTGGTGCCCACGCTTTCCACCACGGATATGAAAACTGCAGATAAAATAGAACTGGGGGAC
AGTGACCTGAAGTTAATGTTAAAGAAACACCATGAGAAGCGGAAACATCAACCAGATCACCCAG
ACCTTTTGACAGGGGATCTGACTCTCAGCGACATCATGACTCGAGTAAATGCCGGCAGGAAGGG
CTCTCTAGCAGCCTTGTATGATTTGGCTGTTCTTAAAAAAAAGGTGAAGGAAAAGGAGGAGAAG
AAAAAGAAGAAAATAAAGTTGATTAAATCGGAGGCAGAGGATCTGGCTGAGCCCCTAAGCAATA
CTGAAGGGGTCCCAACGCTCTCCCAGGCCCCCTCTCCCCTGGCAATATCGTCTATCAAGGAAGA
ACCCCTGGAAGACATCAAGCCTTGTCTTGGAATCAATGAAATATCTTCCAGTTTTTTCTCTCTT
CTGTTAGAGATCTTGCTGCTGGAGAGTCAGGCTAGCCTTCCTATGCTGGAGGACCGGGTTTTGG
ATTGGCAGTCTTCTCCAGCCAGCTCCCTCAACAGCTGGTTCTCTGCTGCCCCCAACTGGGCTGA
GTTGGTGTTGCCTGCTCTGCAGTATCTTGCTGGAGAAAGCCGAGCAGTTCCTTCCAGTTTTTCT
CCATTTGTTGAATTCAAAGAGAAAACCCAGCAGTGGAAATTGCTTGGTCAATCTCAAGATAATG
AAAAGGAATTAGCCGCTCTCTTCCACTTGTGGCTAGAAACCAAAGACCAGGCTTTCTGTAAGGA
AAATGAAGACAGCTCAGATGCCATGACACCTGTGCCTCGAGTAAGAACTGACTATGTGGTTCGG
CCTAGCACAGGAGAGGAGAAACGGGTTTTTCAAGAGCAGGAGCGTTACAGGTATAGCCAACCCC
ATAAGGCATTCACCTTTCGCATGCATGGCTTTGAGTCTGTGGTGGGGCCAGTGAAGGGCGTGTT
TGACAAGGAGACCTCCCTCAACAAGGCTCGTGAGCACTCACTGCTGCGCTCTGACCGGCCTGCC
TATGTCACCATTCTGTCTCTTGTTCGGGATGCTGCGGCTCGGCTGCCTAATGGAGAAGGCACTC
GGGCAGAGATCTGTGAGCTGCTCAAGGACTCTCAGTTTCTTGCTCCTGATGTCACCAGCACTCA
GGTGAACACGGTAGTGAGTGGCGCACTGGATCGATTGCATTATGAGAAGGACCCTTGTGTGAAA
TACGACATTGGTCGGAAGCTGTGGATCTACCTGCATCGTGACCGGAGTGAGGAAGAGTTTGAAC
GGATCCATCAAGCTCAAGCAGCAGCAGCTAAAGCCAGAAAAGCTCTTCAGCAAAAACCCAAACC
GCCATCCAAGGTGAAGTCCAGTAATAAGGAGGGCTCCGTGAAGGGCCTTAGTGGTCCTTCTGAG
CCCAGCCAGATGAGCCTCAGTGACTCCAGCATGCCACCTACCCCAGTTACGCCTGTAACCCCCA
CCACGCCAGCATTGCCTACCCCTATCTCTCCTCCACCTGTGTCAGCGGTGAGCAGAAGTGGCTC
TACCACTGTCTCTGAGCCAGCCAAGTCTAGTTCAGGTGTTCTTCTGGTGTCCTCACCAACAATG
CCACAGCTAGGAACGATGCTTTCCCCTGCTTCCATCCAGACTCCGCCCAGTTCTCAGACCACTG
CTCGGGTTGTCAGCCATTCCAGCTCAGCAGGACTGCCCCAGGTTCGGGTAGTAGCCCAGCCCAG
CCTTCCTGCTGTTTCCCAGCAGTCAGTAGGGCCAGCACAGCCACTACCCCAGATGCCAGCAGGA
CCACAGATCCGTGTGCCAGTCACCGCTACCCAAACCAAAGTAGTACCCCAGGCAGTTGTGGCTA
CAGTTCCAGTCAAGGGGCAGACTACAGCGGCCTCTGTGCAACGGCCTGGACCTGCACAGACAGG
ACTTACAGTGACGAGTCTTCCTGCTGCAGTTAGCCCCGGGAGCAAGACAGCCATGAGTTCTCCT
GGGAGCTCTGCTCCAAGTGCCTCCACAACCGCCGTCATTCAGAATGTCACAGGACAGAACATCA
TCAAGCAGGTGTCAATCACTGGACAGCTTGGTGTGAAGCCCCAGACAGGCAACAGCATTCCACT
CACAGCCACAAACTTCCGTATCCAGGGTAAAGATGTACTGCGCCTGCCGCCTTCTTCCATCACC
ACAGATGCCAAGGGCCAGACGGTTCTGAGAATCACTCCAGACATGATGGCCACACTGGCCAAGT
CTCAGGTCACCACAGTCAAGTTGACTCAGGACCTCTTTGGGGCAGGTAGCGGCACTGCAGGCAA
AGGCATCTCTGCTACCTTGCATGTGACTTCCAACCCTGTCCATGCGGCTGACAGCCCTGCCAAG
GCCCCTTCAGCCAGTGTTCCTTCATCAGCTCCAGCGGGCACTACCGTGGTCAAAGTAACTCCTG
ATCTCAAGCCAACAGAAACCTCCAGTTCAGCTTTTCGCTTGATGCCAGCTCTTGGCGTGAGTGT
GGCAGATCAGAAGGGGAAGAACACAGTGGCCTCTTCAGAAGCAAAACCTGCTGCCACAATCCGC
ATTGTGCAGGGGCTGGGAGTGATGCCTCCTAAAGCAGGCCAGACCATTACTGTTGCAGCACATG
CAAAGCAAGGAGCCTCTGTTGCTGGTGGGTCTGGAACTGTCCATTCTTCAACTGTGTCCTTACC
CAGTATCAATGCCACTGTGTCTAAGACTGTGGCTGTGGCTTCTGGAGCAACAAGCACCCCCATC
AGCATCGGGACTGGAGCCCCCACCGTGCGACAGGTTCCTGTTAACACTACAGTTGTGTCCACAT
CCCAGTCTGGGAAGCTGCCTACCAGGATCACAGTTCCTCTCTCTGTGATTAGCCAGCCAATGAA
GGGCAAGAGCGTGGTCACAGCCCCCATCATCAAAGGCAACCTTGGAGCCAATCTCAGTGGGCTG
GGTCGCAACATCATCCTCACAACCATGCCAGCGGGTGCTAAGCTCATTGCTGGCAATAAGCCAG
TGAGTTTCCTCACCGCCCAGCAGTTGCAGCAGCTTCAGCAGCAAGGTCAGGCTACACAGGTACG
CATCCAGACTGTGCCAGCATCCCATCTGCAACAGGGCACAGCTTCCGGCTCCTCCAAAGCCGTG
TCCACTGTTGTTGTGACCACAGCTCCATCTCCTAAACAAGCACCTGAGCAGCAGTGACTGAGAA
GAAAGGCGGCTTCTTTAAGAGACCAGGCCTGGTTTATCTCGGCTGACAGAAAGGGAGCAGGGAG
GCTGCACCATTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAACTGTGG
CCTAGATTGTGCTGCCACACTCCAGAGTGAAGCCCTTTTTAGGGTTCCAGGGATGATCTGTTAT
CCTGGACTACCAGGAAGAGGGAAGGAACATCAGAGTCTGGGGAGGTCACAGTCACACAAGCCGG
GGTTACCTCCTGAATGTTGGGTTCCCAGGGAGCAGGCCTGCCAGTTGGTGAGTGGACCGGCAGG
GAATAAGCCTCATTCTGTGTGAGGATTTTACTTTTTAGTTTCTGATCTTCTCCGTGACTTGTTG
AGATGTGAGTTTTGTGTCCAGAGAATTTTTGTGTAACTTATTTTTTTAAAGAACCTACTCTACG
TCTTTTATCAAATAGAAACCTGGGCTTCAGTGCCCCTAAACTGATCACTTACCCCTTCAACCAG
AATGAGAGCATAGCAAGACTCTTAATAGTTTGGCGGCTTACTTGATAATGGAGAGGTTATATAG
TAAGAAAATGTAGGCCTTGAGTTAGCATGGACCCCCTCAAGTGGGACTAGTTCAATGCCGTGTA
CTAAATATGGGCATCTGAATCTCGGTTGTCCCTATGTCTTCTCTTGTGGGCATTGTCCTTGACA
AGCCTGTTCATGGAAGTTCAGAGCTTTTGGACAGGAGTAGGGGAAGATGAGGTGCTGCTCTCAC
CGTGCACTTGCTTACAGCCCAGACATTGCACATTCTCCTTGCTGTAGAACAGCCATTGCTAACC
AGACCCTTGGAGCTGGCCACTTGACTGGGACAGAGAAGAAATGGGGAGGTGGGGGCAGGGGTAG
GCACTGCCTGGCAGTGCCATCTTGAGGGGAAAGGATGTTTTTATTCTGGCCATTTCATATTTCT
CAGCCACCACCAGCCACAGACAGGGCTCAGAAGGGTACTTTACAAAGTCCAAGTACTTAATGTA
CTAGGTGTATCTTAACGTGTCTTGCTGTGGTGCAGGGGTGGGTAGGAAAACCTTTCTGCAGGGA
TAGTGCTTCCCTGTCTCTTTGTGAAAATATCCAAATTATTAAAAACATATCTTTAATTT

hide sequence

RefSeq Acc Id:

XM_006242753 ⟹ XP_006242815

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,089,574 - 38,121,503 (+)	NCBI
mRatBN7.2	8	29,831,802 - 29,863,360 (+)	NCBI
Rnor_6.0	8	32,530,417 - 32,561,952 (+)	NCBI
Rnor_5.0	8	32,555,212 - 32,586,756 (+)	NCBI

Sequence:

show sequence

GCCCCTACAGGTCCCGCCCCTTCCGCTGCCGGAGCCCGGAACGTGCGCGCACCCAAACTCCTTG
CGGGAGCGAGCGCGTCCGGGAGCCCACGGCCGGACGAGCCCCGGGTGAGACCCGCGGACCCGGC
TGAGGGTGTATTTTTAGGTAGTGTACCTGTGGAGAAGAAACAATGGATTCCTTGGATCACATGC
TGACAGATCCCCTAGAACTTGGTCCTTGTGGAGATGGTCACAGTACAGGGATCATGGAGGACTG
CCTTCTGGGTGGAACCAGGGTTAGTCTGCCTGAAGACCTGCTGGAGGATCCTGAAATATTCTTT
GACGTCGTCAGCCTCTCCACATGGCAGGAAGTACTAAGTGACTCTCAGCGTGAACATCTCCAGC
AGTTTCTGCCGCAGTTTCCTACAGACACTGTAGAGCAGCAGAATGAGCTCATCCTTGCCCTATT
CAGTGGGGAGAACTTCCGCTTCGGAAACCCTCTGCACATCGCCCAGAAGCTCTTCCGAGATGGA
CACTTTAACCCTGAGGTGGTCAAGTATCGGCAGCTCTGCTTCAAGTCACAGTACAAGCGGTACC
TCAGCTCCCAACAGCAGTATTTCCACCGGCTGCTGAGACAGATTCTTGCTTCCAGAAGTGATCT
CCTGGAGATGGCTCGCACGAGCGGCCCGGCTCTTCCCTTTCGACACAAGCACCATTCACCATCC
CGAAGCCCGGAGGAGCGGGAGTGGCGGACCCAGCAGCGTTACCTGAAAGTCTTGAGGGAAGTGA
AGGAGGAGTGTGGCGACACTGCCCTGTCGTCTGATGAGGAGGCCACGTTGGATTTACAAGAAAA
ATTTTCTTTTGAAGATCTCAGCTCATGGCTTCCAAGCTCTCCAGCACGCTCTCCTAGTCCTGCG
GTGCCCCTGAGGGTGGTGCCCACGCTTTCCACCACGGATATGAAAACTGCAGATAAAATAGAAC
TGGGGGACAGTGACCTGAAGTTAATGTTAAAGAAACACCATGAGAAGCGGAAACATCAACCAGA
TCACCCAGACCTTTTGACAGGGGATCTGACTCTCAGCGACATCATGACTCGAGTAAATGCCGGC
AGGAAGGGCTCTCTAGCAGCCTTGTATGATTTGGCTGTTCTTAAAAAAAAGGTGAAGGAAAAGG
AGGAGAAGAAAAAGAAGAAAATAAAGTTGATTAAATCGGAGGCAGAGGATCTGGCTGAGCCCCT
AAGCAATACTGAAGGGGTCCCAACGCTCTCCCAGGCCCCCTCTCCCCTGGCAATATCGTCTATC
AAGGAAGAACCCCTGGAAGACATCAAGCCTTGTCTTGGAATCAATGAAATATCTTCCAGTTTTT
TCTCTCTTCTGTTAGAGATCTTGCTGCTGGAGAGTCAGGCTAGCCTTCCTATGCTGGAGGACCG
GGTTTTGGATTGGCAGTCTTCTCCAGCCAGCTCCCTCAACAGCTGGTTCTCTGCTGCCCCCAAC
TGGGCTGAGTTGGTGTTGCCTGCTCTGCAGTATCTTGCTGGAGAAAGCCGAGCAGTTCCTTCCA
GTTTTTCTCCATTTGTTGAATTCAAAGAGAAAACCCAGCAGTGGAAATTGCTTGGTCAATCTCA
AGATAATGAAAAGGAATTAGCCGCTCTCTTCCACTTGTGGCTAGAAACCAAAGACCAGGCTTTC
TGTAAGCAGGAAAATGAAGACAGCTCAGATGCCATGACACCTGTGCCTCGAGTAAGAACTGACT
ATGTGGTTCGGCCTAGCACAGGAGAGGAGAAACGGGTTTTTCAAGAGCAGGAGCGTTACAGGTA
TAGCCAACCCCATAAGGCATTCACCTTTCGCATGCATGGCTTTGAGTCTGTGGTGGGGCCAGTG
AAGGGCGTGTTTGACAAGGAGACCTCCCTCAACAAGGCTCGTGAGCACTCACTGCTGCGCTCTG
ACCGGCCTGCCTATGTCACCATTCTGTCTCTTGTTCGGGATGCTGCGGCTCGGCTGCCTAATGG
AGAAGGCACTCGGGCAGAGATCTGTGAGCTGCTCAAGGACTCTCAGTTTCTTGCTCCTGATGTC
ACCAGCACTCAGGTGAACACGGTAGTGAGTGGCGCACTGGATCGATTGCATTATGAGAAGGACC
CTTGTGTGAAATACGACATTGGTCGGAAGCTGTGGATCTACCTGCATCGTGACCGGAGTGAGGA
AGAGTTTGAACGGATCCATCAAGCTCAAGCAGCAGCAGCTAAAGCCAGAAAAGCTCTTCAGCAA
AAACCCAAACCGCCATCCAAGGTGAAGTCCAGTAATAAGGAGGGCTCCGTGAAGGGCCTTAGTG
GTCCTTCTGAGCCCAGCCAGATGAGCCTCAGTGACTCCAGCATGCCACCTACCCCAGTTACGCC
TGTAACCCCCACCACGCCAGCATTGCCTACCCCTATCTCTCCTCCACCTGTGTCAGCGGTGAGC
AGAAGTGGCTCTACCACTGTCTCTGAGCCAGCCAAGTCTAGTTCAGGTGTTCTTCTGGTGTCCT
CACCAACAATGCCACAGCTAGGAACGATGCTTTCCCCTGCTTCCATCCAGACTCCGCCCAGTTC
TCAGACCACTGCTCGGGTTGTCAGCCATTCCAGCTCAGCAGGACTGCCCCAGGTTCGGGTAGTA
GCCCAGCCCAGCCTTCCTGCTGTTTCCCAGCAGTCAGTAGGGCCAGCACAGCCACTACCCCAGA
TGCCAGCAGGACCACAGATCCGTGTGCCAGTCACCGCTACCCAAACCAAAGTAGTACCCCAGGC
AGTTGTGGCTACAGTTCCAGTCAAGGGGCAGACTACAGCGGCCTCTGTGCAACGGCCTGGACCT
GCACAGACAGGACTTACAGTGACGAGTCTTCCTGCTGCAGTTAGCCCCGGGAGCAAGACAGCCA
TGAGTTCTCCTGGGAGCTCTGCTCCAAGTGCCTCCACAACCGCCGTCATTCAGAATGTCACAGG
ACAGAACATCATCAAGCAGGTGTCAATCACTGGACAGCTTGGTGTGAAGCCCCAGACAGGCAAC
AGCATTCCACTCACAGCCACAAACTTCCGTATCCAGGGTAAAGATGTACTGCGCCTGCCGCCTT
CTTCCATCACCACAGATGCCAAGGGCCAGACGGTTCTGAGAATCACTCCAGACATGATGGCCAC
ACTGGCCAAGTCTCAGGTCACCACAGTCAAGTTGACTCAGGACCTCTTTGGGGCAGGTAGCGGC
ACTGCAGGCAAAGGCATCTCTGCTACCTTGCATGTGACTTCCAACCCTGTCCATGCGGCTGACA
GCCCTGCCAAGGCCCCTTCAGCCAGTGTTCCTTCATCAGCTCCAGCGGGCACTACCGTGGTCAA
AGTAACTCCTGATCTCAAGCCAACAGAAACCTCCAGTTCAGCTTTTCGCTTGATGCCAGCTCTT
GGCGTGAGTGTGGCAGATCAGAAGGGGAAGAACACAGTGGCCTCTTCAGAAGCAAAACCTGCTG
CCACAATCCGCATTGTGCAGGGGCTGGGAGTGATGCCTCCTAAAGCAGGCCAGACCATTACTGT
TGCAGCACATGCAAAGCAAGGAGCCTCTGTTGCTGGTGGGTCTGGAACTGTCCATTCTTCAACT
GTGTCCTTACCCAGTATCAATGCCACTGTGTCTAAGACTGTGGCTGTGGCTTCTGGAGCAACAA
GCACCCCCATCAGCATCGGGACTGGAGCCCCCACCGTGCGACAGGTTCCTGTTAACACTACAGT
TGTGTCCACATCCCAGTCTGGGAAGCTGCCTACCAGGATCACAGTTCCTCTCTCTGTGATTAGC
CAGCCAATGAAGGGCAAGAGCGTGGTCACAGCCCCCATCATCAAAGGCAACCTTGGAGCCAATC
TCAGTGGGCTGGGTCGCAACATCATCCTCACAACCATGCCAGCGGGTGCTAAGCTCATTGCTGG
CAATAAGCCAGTGAGTTTCCTCACCGCCCAGCAGTTGCAGCAGCTTCAGCAGCAAGGTCAGGCT
ACACAGGTACGCATCCAGACTGTGCCAGCATCCCATCTGCAACAGGGCACAGCTTCCGGCTCCT
CCAAAGCCGTGTCCACTGTTGTTGTGACCACAGCTCCATCTCCTAAACAAGCACCTGAGCAGCA
GTGACTGAGAAGAAAGGCGGCTTCTTTAAGAGACCAGGCCTGGTTTATCTCGGCTGACAGAAAG
GGAGCAGGGAGGCTGCACCATTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGAT
GGCAACTGTGGCCTAGATTGTGCTGCCACACTCCAGAGTGAAGCCCTTTTTAGGGTTCCAGGGA
TGATCTGTTATCCTGGACTACCAGGAAGAGGGAAGGAACATCAGAGTCTGGGGAGGTCACAGTC
ACACAAGCCGGGGTTACCTCCTGAATGTTGGGTTCCCAGGGAGCAGGCCTGCCAGTTGGTGAGT
GGACCGGCAGGGAATAAGCCTCATTCTGTGTGAGGATTTTACTTTTTAGTTTCTGATCTTCTCC
GTGACTTGTTGAGATGTGAGTTTTGTGTCCAGAGAATTTTTGTGTAACTTATTTTTTTAAAGAA
CCTACTCTACGTCTTTTATCAAATAGAAACCTGGGCTTCAGTGCCCCTAAACTGATCACTTACC
CCTTCAACCAGAATGAGAGCATAGCAAGACTCTTAATAGTTTGGCGGCTTACTTGATAATGGAG
AGGTTATATAGTAAGAAAATGTAGGCCTTGAGTTAGCATGGACCCCCTCAAGTGGGACTAGTTC
AATGCCGTGTACTAAATATGGGCATCTGAATCTCGGTTGTCCCTATGTCTTCTCTTGTGGGCAT
TGTCCTTGACAAGCCTGTTCATGGAAGTTCAGAGCTTTTGGACAGGAGTAGGGGAAGATGAGGT
GCTGCTCTCACCGTGCACTTGCTTACAGCCCAGACATTGCACATTCTCCTTGCTGTAGAACAGC
CATTGCTAACCAGACCCTTGGAGCTGGCCACTTGACTGGGACAGAGAAGAAATGGGGAGGTGGG
GGCAGGGGTAGGCACTGCCTGGCAGTGCCATCTTGAGGGGAAAGGATGTTTTTATTCTGGCCAT
TTCATATTTCTCAGCCACCACCAGCCACAGACAGGGCTCAGAAGGGTACTTTACAAAGTCCAAG
TACTTAATGTACTAGGTGTATCTTAACGTGTCTTGCTGTGGTGCAGGGGTGGGTAGGAAAACCT
TTCTGCAGGGATAGTGCTTCCCTGTCTCTTTGTGAAAATATCCAAATTATTAAAAACATATCTT
TAA

hide sequence

RefSeq Acc Id:

XM_006242756 ⟹ XP_006242818

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,089,574 - 38,121,503 (+)	NCBI
mRatBN7.2	8	29,831,802 - 29,863,360 (+)	NCBI
Rnor_6.0	8	32,530,417 - 32,561,952 (+)	NCBI
Rnor_5.0	8	32,555,212 - 32,586,756 (+)	NCBI

Sequence:

show sequence

GCCCCTACAGGTCCCGCCCCTTCCGCTGCCGGAGCCCGGAACGTGCGCGCACCCAAACTCCTTG
CGGGAGCGAGCGCGTCCGGGAGCCCACGGCCGGACGAGCCCCGGGTGAGACCCGCGGACCCGGC
TGAGGGTGTATTTTTAGGTAGTGTACCTGTGGAGAAGAAACAATGGATTCCTTGGATCACATGC
TGACAGATCCCCTAGAACTTGGTCCTTGTGGAGATGGTCACAGTACAGGGATCATGGAGGACTG
CCTTCTGGGTGGAACCAGGGTTAGTCTGCCTGAAGACCTGCTGGAGGATCCTGAAATATTCTTT
GACGTCGTCAGCCTCTCCACATGGCAGGAAGTACTAAGTGACTCTCAGCGTGAACATCTCCAGC
AGTTTCTGCCGCAGTTTCCTACAGACACTGTAGAGCAGCAGAATGAGCTCATCCTTGCCCTATT
CAGTGGGGAGAACTTCCGCTTCGGAAACCCTCTGCACATCGCCCAGAAGCTCTTCCGAGATGGA
CACTTTAACCCTGAGGTGGTCAAGTATCGGCAGCTCTGCTTCAAGTCACAGTACAAGCGGTACC
TCAGCTCCCAACAGCAGTATTTCCACCGGCTGCTGAGACAGATTCTTGCTTCCAGAAGTGATCT
CCTGGAGATGGCTCGCACGAGCGGCCCGGCTCTTCCCTTTCGACACAAGCACCATTCACCATCC
CGAAGCCCGGAGGAGCGGGAGTGGCGGACCCAGCAGCGTTACCTGAAAGTCTTGAGGGAAGTGA
AGGAGGAGTGTGGCGACACTGCCCTGTCGTCTGATGAGGAGGCCACGTTGGATTTACAAGAAAA
ATTTTCTTTTGAAGATCTCAGCTCATGGCTTCCAAGCTCTCCAGCACGCTCTCCTAGTCCTGCG
GTGCCCCTGAGGGTGGTGCCCACGCTTTCCACCACGGATATGAAAACTGCAGATAAAATAGAAC
TGGGGGACAGTGACCTGAAGTTAATGTTAAAGAAACACCATGAGAAGCGGAAACATCAACCAGA
TCACCCAGACCTTTTGACAGGGGATCTGACTCTCAGCGACATCATGACTCGAGTAAATGCCGGC
AGGAAGGGCTCTCTAGCAGCCTTGTATGATTTGGCTGTTCTTAAAAAAAAGGTGAAGGAAAAGG
AGGAGAAGAAAAAGAAGAAAATAAAGTTGATTAAATCGGAGGCAGAGGATCTGGCTGAGCCCCT
AAGCAATACTGAAGGGGTCCCAACGCTCTCCCAGGCCCCCTCTCCCCTGGCAATATCGTCTATC
AAGGAAGAACCCCTGGAAGACATCAAGCCTTGTCTTGGAATCAATGAAATATCTTCCAGTTTTT
TCTCTCTTCTGTTAGAGATCTTGCTGCTGGAGAGTCAGGCTAGCCTTCCTATGCTGGAGGACCG
GGTTTTGGATTGGCAGTCTTCTCCAGCCAGCTCCCTCAACAGCTGGTTCTCTGCTGCCCCCAAC
TGGGCTGAGTTGGTGTTGCCTGCTCTGCAGTATCTTGCTGGAGAAAGCCGAGCAGTTCCTTCCA
GTTTTTCTCCATTTGTTGAATTCAAAGAGAAAACCCAGCAGTGGAAATTGCTTGGTCAATCTCA
AGATAATGAAAAGGAATTAGCCGCTCTCTTCCACTTGTGGCTAGAAACCAAAGACCAGGCTTTC
TGTAAGGAAAATGAAGACAGCTCAGATGCCATGACACCTGTGCCTCGAGTAAGAACTGACTATG
TGGTTCGGCCTAGCACAGGAGAGGAGAAACGGGTTTTTCAAGAGCAGGAGCGTTACAGGTATAG
CCAACCCCATAAGGCATTCACCTTTCGCATGCATGGCTTTGAGTCTGTGGTGGGGCCAGTGAAG
GGCGTGTTTGACAAGGAGACCTCCCTCAACAAGGCTCGTGAGCACTCACTGCTGCGCTCTGACC
GGCCTGCCTATGTCACCATTCTGTCTCTTGTTCGGGATGCTGCGGCTCGGCTGCCTAATGGAGA
AGGCACTCGGGCAGAGATCTGTGAGCTGCTCAAGGACTCTCAGTTTCTTGCTCCTGATGTCACC
AGCACTCAGGTGAACACGGTAGTGAGTGGCGCACTGGATCGATTGCATTATGAGAAGGACCCTT
GTGTGAAATACGACATTGGTCGGAAGCTGTGGATCTACCTGCATCGTGACCGGAGTGAGGAAGA
GTTTGAACGGATCCATCAAGCTCAAGCAGCAGCAGCTAAAGCCAGAAAAGCTCTTCAGCAAAAA
CCCAAACCGCCATCCAAGGTGAAGTCCAGTAATAAGGAGGGCTCCGTGAAGGGCCTTAGTGGTC
CTTCTGAGCCCAGCCAGATGAGCCTCAGTGACTCCAGCATGCCACCTACCCCAGTTACGCCTGT
AACCCCCACCACGCCAGCATTGCCTACCCCTATCTCTCCTCCACCTGTGTCAGCGGTGAGCAGA
AGTGGCTCTACCACTGTCTCTGAGCCAGCCAAGTCTAGTTCAGGTGTTCTTCTGGTGTCCTCAC
CAACAATGCCACAGCTAGGAACGATGCTTTCCCCTGCTTCCATCCAGACTCCGCCCAGTTCTCA
GACCACTGCTCGGGTTGTCAGCCATTCCAGCTCAGCAGGACTGCCCCAGGTTCGGGTAGTAGCC
CAGCCCAGCCTTCCTGCTGTTTCCCAGCAGTCAGTAGGGCCAGCACAGCCACTACCCCAGATGC
CAGCAGGACCACAGATCCGTGTGCCAGTCACCGCTACCCAAACCAAAGTAGTACCCCAGGCAGT
TGTGGCTACAGTTCCAGTCAAGGGGCAGACTACAGCGGCCTCTGTGCAACGGCCTGGACCTGCA
CAGACAGGACTTACAGTGACGAGTCTTCCTGCTGCAGTTAGCCCCGGGAGCAAGACAGCCATGA
GTTCTCCTGGGAGCTCTGCTCCAAGTGCCTCCACAACCGCCGTCATTCAGAATGTCACAGGACA
GAACATCATCAAGCAGGTGTCAATCACTGGACAGCTTGGTGTGAAGCCCCAGACAGGCAACAGC
ATTCCACTCACAGCCACAAACTTCCGTATCCAGGGTAAAGATGTACTGCGCCTGCCGCCTTCTT
CCATCACCACAGATGCCAAGGGCCAGACGGTTCTGAGAATCACTCCAGACATGATGGCCACACT
GGCCAAGTCTCAGGTCACCACAGTCAAGTTGACTCAGGACCTCTTTGGGGCAGGTAGCGGCACT
GCAGGCAAAGGCATCTCTGCTACCTTGCATGTGACTTCCAACCCTGTCCATGCGGCTGACAGCC
CTGCCAAGGCCCCTTCAGCCAGTGTTCCTTCATCAGCTCCAGCGGGCACTACCGTGGTCAAAGT
AACTCCTGATCTCAAGCCAACAGAAACCTCCAGTTCAGCTTTTCGCTTGATGCCAGCTCTTGGC
GTGAGTGTGGCAGATCAGAAGGGGAAGAACACAGTGGCCTCTTCAGAAGCAAAACCTGCTGCCA
CAATCCGCATTGTGCAGGGGCTGGGAGTGATGCCTCCTAAAGCAGGCCAGACCATTACTGTTGC
AGCACATGCAAAGCAAGGAGCCTCTGTTGCTGGTGGGTCTGGAACTGTCCATTCTTCAACTGTG
TCCTTACCCAGTATCAATGCCACTGTGTCTAAGACTGTGGCTGTGGCTTCTGGAGCAACAAGCA
CCCCCATCAGCATCGGGACTGGAGCCCCCACCGTGCGACAGGTTCCTGTTAACACTACAGTTGT
GTCCACATCCCAGTCTGGGAAGCTGCCTACCAGGATCACAGTTCCTCTCTCTGTGATTAGCCAG
CCAATGAAGGGCAAGAGCGTGGTCACAGCCCCCATCATCAAAGGCAACCTTGGAGCCAATCTCA
GTGGGCTGGGTCGCAACATCATCCTCACAACCATGCCAGCGGGTGCTAAGCTCATTGCTGGCAA
TAAGCCAGTGAGTTTCCTCACCGCCCAGCAGTTGCAGCAGCTTCAGCAGCAAGGTCAGGCTACA
CAGGTACGCATCCAGACTGTGCCAGCATCCCATCTGCAACAGGGCACAGCTTCCGGCTCCTCCA
AAGCCGTGTCCACTGTTGTTGTGACCACAGCTCCATCTCCTAAACAAGCACCTGAGCAGCAGTG
ACTGAGAAGAAAGGCGGCTTCTTTAAGAGACCAGGCCTGGTTTATCTCGGCTGACAGAAAGGGA
GCAGGGAGGCTGCACCATTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGC
AACTGTGGCCTAGATTGTGCTGCCACACTCCAGAGTGAAGCCCTTTTTAGGGTTCCAGGGATGA
TCTGTTATCCTGGACTACCAGGAAGAGGGAAGGAACATCAGAGTCTGGGGAGGTCACAGTCACA
CAAGCCGGGGTTACCTCCTGAATGTTGGGTTCCCAGGGAGCAGGCCTGCCAGTTGGTGAGTGGA
CCGGCAGGGAATAAGCCTCATTCTGTGTGAGGATTTTACTTTTTAGTTTCTGATCTTCTCCGTG
ACTTGTTGAGATGTGAGTTTTGTGTCCAGAGAATTTTTGTGTAACTTATTTTTTTAAAGAACCT
ACTCTACGTCTTTTATCAAATAGAAACCTGGGCTTCAGTGCCCCTAAACTGATCACTTACCCCT
TCAACCAGAATGAGAGCATAGCAAGACTCTTAATAGTTTGGCGGCTTACTTGATAATGGAGAGG
TTATATAGTAAGAAAATGTAGGCCTTGAGTTAGCATGGACCCCCTCAAGTGGGACTAGTTCAAT
GCCGTGTACTAAATATGGGCATCTGAATCTCGGTTGTCCCTATGTCTTCTCTTGTGGGCATTGT
CCTTGACAAGCCTGTTCATGGAAGTTCAGAGCTTTTGGACAGGAGTAGGGGAAGATGAGGTGCT
GCTCTCACCGTGCACTTGCTTACAGCCCAGACATTGCACATTCTCCTTGCTGTAGAACAGCCAT
TGCTAACCAGACCCTTGGAGCTGGCCACTTGACTGGGACAGAGAAGAAATGGGGAGGTGGGGGC
AGGGGTAGGCACTGCCTGGCAGTGCCATCTTGAGGGGAAAGGATGTTTTTATTCTGGCCATTTC
ATATTTCTCAGCCACCACCAGCCACAGACAGGGCTCAGAAGGGTACTTTACAAAGTCCAAGTAC
TTAATGTACTAGGTGTATCTTAACGTGTCTTGCTGTGGTGCAGGGGTGGGTAGGAAAACCTTTC
TGCAGGGATAGTGCTTCCCTGTCTCTTTGTGAAAATATCCAAATTATTAAAAACATATCTTTAA

hide sequence

RefSeq Acc Id:

XM_006242759 ⟹ XP_006242821

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,089,574 - 38,121,503 (+)	NCBI
mRatBN7.2	8	29,831,802 - 29,863,360 (+)	NCBI
Rnor_6.0	8	32,530,417 - 32,561,952 (+)	NCBI
Rnor_5.0	8	32,555,212 - 32,586,756 (+)	NCBI

Sequence:

show sequence

GCCCCTACAGGTCCCGCCCCTTCCGCTGCCGGAGCCCGGAACGTGCGCGCACCCAAACTCCTTG
CGGGAGCGAGCGCGTCCGGGAGCCCACGGCCGGACGAGCCCCGGGTGAGACCCGCGGACCCGGC
TGAGGGTGTATTTTTAGGTAGTGTACCTGTGGAGAAGAAACAATGGATTCCTTGGATCACATGC
TGACAGATCCCCTAGAACTTGGTCCTTGTGGAGATGGTCACAGTACAGGGATCATGGAGGACTG
CCTTCTGGGTGGAACCAGGGTTAGTCTGCCTGAAGACCTGCTGGAGGATCCTGAAATATTCTTT
GACGTCGTCAGCCTCTCCACATGGCAGGAAGTACTAAGTGACTCTCAGCGTGAACATCTCCAGC
AGTTTCTGCCGCAGTTTCCTACAGACACTGTAGAGCAGCAGAATGAGCTCATCCTTGCCCTATT
CAGTGGGGAGAACTTCCGCTTCGGAAACCCTCTGCACATCGCCCAGAAGCTCTTCCGAGATGGA
CACTTTAACCCTGAGGTGGTCAAGTATCGGCAGCTCTGCTTCAAGTCACAGTACAAGCGGTACC
TCAGCTCCCAACAGCAGTATTTCCACCGGCTGCTGAGACAGATTCTTGCTTCCAGAAGTGATCT
CCTGGAGATGGCTCGCACGAGCGGCCCGGCTCTTCCCTTTCGACACAAGCACCATTCACCATCC
CGAAGCCCGGAGGAGCGGGAGTGGCGGACCCAGCAGCGTTACCTGAAAGTCTTGAGGGAAGTGA
AGGAGGAGTGTGGCGACACTGCCCTGTCGTCTGATGAGGAGGATCTCAGCTCATGGCTTCCAAG
CTCTCCAGCACGCTCTCCTAGTCCTGCGGTGCCCCTGAGGGTGGTGCCCACGCTTTCCACCACG
GATATGAAAACTGCAGATAAAATAGAACTGGGGGACAGTGACCTGAAGTTAATGTTAAAGAAAC
ACCATGAGAAGCGGAAACATCAACCAGATCACCCAGACCTTTTGACAGGGGATCTGACTCTCAG
CGACATCATGACTCGAGTAAATGCCGGCAGGAAGGGCTCTCTAGCAGCCTTGTATGATTTGGCT
GTTCTTAAAAAAAAGGTGAAGGAAAAGGAGGAGAAGAAAAAGAAGAAAATAAAGTTGATTAAAT
CGGAGGCAGAGGATCTGGCTGAGCCCCTAAGCAATACTGAAGGGGTCCCAACGCTCTCCCAGGC
CCCCTCTCCCCTGGCAATATCGTCTATCAAGGAAGAACCCCTGGAAGACATCAAGCCTTGTCTT
GGAATCAATGAAATATCTTCCAGTTTTTTCTCTCTTCTGTTAGAGATCTTGCTGCTGGAGAGTC
AGGCTAGCCTTCCTATGCTGGAGGACCGGGTTTTGGATTGGCAGTCTTCTCCAGCCAGCTCCCT
CAACAGCTGGTTCTCTGCTGCCCCCAACTGGGCTGAGTTGGTGTTGCCTGCTCTGCAGTATCTT
GCTGGAGAAAGCCGAGCAGTTCCTTCCAGTTTTTCTCCATTTGTTGAATTCAAAGAGAAAACCC
AGCAGTGGAAATTGCTTGGTCAATCTCAAGATAATGAAAAGGAATTAGCCGCTCTCTTCCACTT
GTGGCTAGAAACCAAAGACCAGGCTTTCTGTAAGCAGGAAAATGAAGACAGCTCAGATGCCATG
ACACCTGTGCCTCGAGTAAGAACTGACTATGTGGTTCGGCCTAGCACAGGAGAGGAGAAACGGG
TTTTTCAAGAGCAGGAGCGTTACAGGTATAGCCAACCCCATAAGGCATTCACCTTTCGCATGCA
TGGCTTTGAGTCTGTGGTGGGGCCAGTGAAGGGCGTGTTTGACAAGGAGACCTCCCTCAACAAG
GCTCGTGAGCACTCACTGCTGCGCTCTGACCGGCCTGCCTATGTCACCATTCTGTCTCTTGTTC
GGGATGCTGCGGCTCGGCTGCCTAATGGAGAAGGCACTCGGGCAGAGATCTGTGAGCTGCTCAA
GGACTCTCAGTTTCTTGCTCCTGATGTCACCAGCACTCAGGTGAACACGGTAGTGAGTGGCGCA
CTGGATCGATTGCATTATGAGAAGGACCCTTGTGTGAAATACGACATTGGTCGGAAGCTGTGGA
TCTACCTGCATCGTGACCGGAGTGAGGAAGAGTTTGAACGGATCCATCAAGCTCAAGCAGCAGC
AGCTAAAGCCAGAAAAGCTCTTCAGCAAAAACCCAAACCGCCATCCAAGGTGAAGTCCAGTAAT
AAGGAGGGCTCCGTGAAGGGCCTTAGTGGTCCTTCTGAGCCCAGCCAGATGAGCCTCAGTGACT
CCAGCATGCCACCTACCCCAGTTACGCCTGTAACCCCCACCACGCCAGCATTGCCTACCCCTAT
CTCTCCTCCACCTGTGTCAGCGGTGAGCAGAAGTGGCTCTACCACTGTCTCTGAGCCAGCCAAG
TCTAGTTCAGGTGTTCTTCTGGTGTCCTCACCAACAATGCCACAGCTAGGAACGATGCTTTCCC
CTGCTTCCATCCAGACTCCGCCCAGTTCTCAGACCACTGCTCGGGTTGTCAGCCATTCCAGCTC
AGCAGGACTGCCCCAGGTTCGGGTAGTAGCCCAGCCCAGCCTTCCTGCTGTTTCCCAGCAGTCA
GTAGGGCCAGCACAGCCACTACCCCAGATGCCAGCAGGACCACAGATCCGTGTGCCAGTCACCG
CTACCCAAACCAAAGTAGTACCCCAGGCAGTTGTGGCTACAGTTCCAGTCAAGGGGCAGACTAC
AGCGGCCTCTGTGCAACGGCCTGGACCTGCACAGACAGGACTTACAGTGACGAGTCTTCCTGCT
GCAGTTAGCCCCGGGAGCAAGACAGCCATGAGTTCTCCTGGGAGCTCTGCTCCAAGTGCCTCCA
CAACCGCCGTCATTCAGAATGTCACAGGACAGAACATCATCAAGCAGGTGTCAATCACTGGACA
GCTTGGTGTGAAGCCCCAGACAGGCAACAGCATTCCACTCACAGCCACAAACTTCCGTATCCAG
GGTAAAGATGTACTGCGCCTGCCGCCTTCTTCCATCACCACAGATGCCAAGGGCCAGACGGTTC
TGAGAATCACTCCAGACATGATGGCCACACTGGCCAAGTCTCAGGTCACCACAGTCAAGTTGAC
TCAGGACCTCTTTGGGGCAGGTAGCGGCACTGCAGGCAAAGGCATCTCTGCTACCTTGCATGTG
ACTTCCAACCCTGTCCATGCGGCTGACAGCCCTGCCAAGGCCCCTTCAGCCAGTGTTCCTTCAT
CAGCTCCAGCGGGCACTACCGTGGTCAAAGTAACTCCTGATCTCAAGCCAACAGAAACCTCCAG
TTCAGCTTTTCGCTTGATGCCAGCTCTTGGCGTGAGTGTGGCAGATCAGAAGGGGAAGAACACA
GTGGCCTCTTCAGAAGCAAAACCTGCTGCCACAATCCGCATTGTGCAGGGGCTGGGAGTGATGC
CTCCTAAAGCAGGCCAGACCATTACTGTTGCAGCACATGCAAAGCAAGGAGCCTCTGTTGCTGG
TGGGTCTGGAACTGTCCATTCTTCAACTGTGTCCTTACCCAGTATCAATGCCACTGTGTCTAAG
ACTGTGGCTGTGGCTTCTGGAGCAACAAGCACCCCCATCAGCATCGGGACTGGAGCCCCCACCG
TGCGACAGGTTCCTGTTAACACTACAGTTGTGTCCACATCCCAGTCTGGGAAGCTGCCTACCAG
GATCACAGTTCCTCTCTCTGTGATTAGCCAGCCAATGAAGGGCAAGAGCGTGGTCACAGCCCCC
ATCATCAAAGGCAACCTTGGAGCCAATCTCAGTGGGCTGGGTCGCAACATCATCCTCACAACCA
TGCCAGCGGGTGCTAAGCTCATTGCTGGCAATAAGCCAGTGAGTTTCCTCACCGCCCAGCAGTT
GCAGCAGCTTCAGCAGCAAGGTCAGGCTACACAGGTACGCATCCAGACTGTGCCAGCATCCCAT
CTGCAACAGGGCACAGCTTCCGGCTCCTCCAAAGCCGTGTCCACTGTTGTTGTGACCACAGCTC
CATCTCCTAAACAAGCACCTGAGCAGCAGTGACTGAGAAGAAAGGCGGCTTCTTTAAGAGACCA
GGCCTGGTTTATCTCGGCTGACAGAAAGGGAGCAGGGAGGCTGCACCATTCTTCTGAGCTGTCC
TGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAACTGTGGCCTAGATTGTGCTGCCACACTCCAG
AGTGAAGCCCTTTTTAGGGTTCCAGGGATGATCTGTTATCCTGGACTACCAGGAAGAGGGAAGG
AACATCAGAGTCTGGGGAGGTCACAGTCACACAAGCCGGGGTTACCTCCTGAATGTTGGGTTCC
CAGGGAGCAGGCCTGCCAGTTGGTGAGTGGACCGGCAGGGAATAAGCCTCATTCTGTGTGAGGA
TTTTACTTTTTAGTTTCTGATCTTCTCCGTGACTTGTTGAGATGTGAGTTTTGTGTCCAGAGAA
TTTTTGTGTAACTTATTTTTTTAAAGAACCTACTCTACGTCTTTTATCAAATAGAAACCTGGGC
TTCAGTGCCCCTAAACTGATCACTTACCCCTTCAACCAGAATGAGAGCATAGCAAGACTCTTAA
TAGTTTGGCGGCTTACTTGATAATGGAGAGGTTATATAGTAAGAAAATGTAGGCCTTGAGTTAG
CATGGACCCCCTCAAGTGGGACTAGTTCAATGCCGTGTACTAAATATGGGCATCTGAATCTCGG
TTGTCCCTATGTCTTCTCTTGTGGGCATTGTCCTTGACAAGCCTGTTCATGGAAGTTCAGAGCT
TTTGGACAGGAGTAGGGGAAGATGAGGTGCTGCTCTCACCGTGCACTTGCTTACAGCCCAGACA
TTGCACATTCTCCTTGCTGTAGAACAGCCATTGCTAACCAGACCCTTGGAGCTGGCCACTTGAC
TGGGACAGAGAAGAAATGGGGAGGTGGGGGCAGGGGTAGGCACTGCCTGGCAGTGCCATCTTGA
GGGGAAAGGATGTTTTTATTCTGGCCATTTCATATTTCTCAGCCACCACCAGCCACAGACAGGG
CTCAGAAGGGTACTTTACAAAGTCCAAGTACTTAATGTACTAGGTGTATCTTAACGTGTCTTGC
TGTGGTGCAGGGGTGGGTAGGAAAACCTTTCTGCAGGGATAGTGCTTCCCTGTCTCTTTGTGAA
AATATCCAAATTATTAAAAACATATCTTTAA

hide sequence

RefSeq Acc Id:

XM_006242760 ⟹ XP_006242822

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,089,574 - 38,121,503 (+)	NCBI
mRatBN7.2	8	29,831,802 - 29,863,360 (+)	NCBI
Rnor_6.0	8	32,530,417 - 32,561,952 (+)	NCBI
Rnor_5.0	8	32,555,212 - 32,586,756 (+)	NCBI

Sequence:

show sequence

GCCCCTACAGGTCCCGCCCCTTCCGCTGCCGGAGCCCGGAACGTGCGCGCACCCAAACTCCTTG
CGGGAGCGAGCGCGTCCGGGAGCCCACGGCCGGACGAGCCCCGGGTGAGACCCGCGGACCCGGC
TGAGGGTGTATTTTTAGGTAGTGTACCTGTGGAGAAGAAACAATGGATTCCTTGGATCACATGC
TGACAGATCCCCTAGAACTTGGTCCTTGTGGAGATGGTCACAGTACAGGGATCATGGAGGACTG
CCTTCTGGGTGGAACCAGGGTTAGTCTGCCTGAAGACCTGCTGGAGGATCCTGAAATATTCTTT
GACGTCGTCAGCCTCTCCACATGGCAGGAAGTACTAAGTGACTCTCAGCGTGAACATCTCCAGC
AGTTTCTGCCGCAGTTTCCTACAGACACTGTAGAGCAGCAGAATGAGCTCATCCTTGCCCTATT
CAGTGGGGAGAACTTCCGCTTCGGAAACCCTCTGCACATCGCCCAGAAGCTCTTCCGAGATGGA
CACTTTAACCCTGAGGTGGTCAAGTATCGGCAGCTCTGCTTCAAGTCACAGTACAAGCGGTACC
TCAGCTCCCAACAGCAGTATTTCCACCGGCTGCTGAGACAGATTCTTGCTTCCAGAAGTGATCT
CCTGGAGATGGCTCGCACGAGCGGCCCGGCTCTTCCCTTTCGACACAAGCACCATTCACCATCC
CGAAGCCCGGAGGAGCGGGAGTGGCGGACCCAGCAGCGTTACCTGAAAGTCTTGAGGGAAGTGA
AGGAGGAGTGTGGCGACACTGCCCTGTCGTCTGATGAGGAGGATCTCAGCTCATGGCTTCCAAG
CTCTCCAGCACGCTCTCCTAGTCCTGCGGTGCCCCTGAGGGTGGTGCCCACGCTTTCCACCACG
GATATGAAAACTGCAGATAAAATAGAACTGGGGGACAGTGACCTGAAGTTAATGTTAAAGAAAC
ACCATGAGAAGCGGAAACATCAACCAGATCACCCAGACCTTTTGACAGGGGATCTGACTCTCAG
CGACATCATGACTCGAGTAAATGCCGGCAGGAAGGGCTCTCTAGCAGCCTTGTATGATTTGGCT
GTTCTTAAAAAAAAGGTGAAGGAAAAGGAGGAGAAGAAAAAGAAGAAAATAAAGTTGATTAAAT
CGGAGGCAGAGGATCTGGCTGAGCCCCTAAGCAATACTGAAGGGGTCCCAACGCTCTCCCAGGC
CCCCTCTCCCCTGGCAATATCGTCTATCAAGGAAGAACCCCTGGAAGACATCAAGCCTTGTCTT
GGAATCAATGAAATATCTTCCAGTTTTTTCTCTCTTCTGTTAGAGATCTTGCTGCTGGAGAGTC
AGGCTAGCCTTCCTATGCTGGAGGACCGGGTTTTGGATTGGCAGTCTTCTCCAGCCAGCTCCCT
CAACAGCTGGTTCTCTGCTGCCCCCAACTGGGCTGAGTTGGTGTTGCCTGCTCTGCAGTATCTT
GCTGGAGAAAGCCGAGCAGTTCCTTCCAGTTTTTCTCCATTTGTTGAATTCAAAGAGAAAACCC
AGCAGTGGAAATTGCTTGGTCAATCTCAAGATAATGAAAAGGAATTAGCCGCTCTCTTCCACTT
GTGGCTAGAAACCAAAGACCAGGCTTTCTGTAAGGAAAATGAAGACAGCTCAGATGCCATGACA
CCTGTGCCTCGAGTAAGAACTGACTATGTGGTTCGGCCTAGCACAGGAGAGGAGAAACGGGTTT
TTCAAGAGCAGGAGCGTTACAGGTATAGCCAACCCCATAAGGCATTCACCTTTCGCATGCATGG
CTTTGAGTCTGTGGTGGGGCCAGTGAAGGGCGTGTTTGACAAGGAGACCTCCCTCAACAAGGCT
CGTGAGCACTCACTGCTGCGCTCTGACCGGCCTGCCTATGTCACCATTCTGTCTCTTGTTCGGG
ATGCTGCGGCTCGGCTGCCTAATGGAGAAGGCACTCGGGCAGAGATCTGTGAGCTGCTCAAGGA
CTCTCAGTTTCTTGCTCCTGATGTCACCAGCACTCAGGTGAACACGGTAGTGAGTGGCGCACTG
GATCGATTGCATTATGAGAAGGACCCTTGTGTGAAATACGACATTGGTCGGAAGCTGTGGATCT
ACCTGCATCGTGACCGGAGTGAGGAAGAGTTTGAACGGATCCATCAAGCTCAAGCAGCAGCAGC
TAAAGCCAGAAAAGCTCTTCAGCAAAAACCCAAACCGCCATCCAAGGTGAAGTCCAGTAATAAG
GAGGGCTCCGTGAAGGGCCTTAGTGGTCCTTCTGAGCCCAGCCAGATGAGCCTCAGTGACTCCA
GCATGCCACCTACCCCAGTTACGCCTGTAACCCCCACCACGCCAGCATTGCCTACCCCTATCTC
TCCTCCACCTGTGTCAGCGGTGAGCAGAAGTGGCTCTACCACTGTCTCTGAGCCAGCCAAGTCT
AGTTCAGGTGTTCTTCTGGTGTCCTCACCAACAATGCCACAGCTAGGAACGATGCTTTCCCCTG
CTTCCATCCAGACTCCGCCCAGTTCTCAGACCACTGCTCGGGTTGTCAGCCATTCCAGCTCAGC
AGGACTGCCCCAGGTTCGGGTAGTAGCCCAGCCCAGCCTTCCTGCTGTTTCCCAGCAGTCAGTA
GGGCCAGCACAGCCACTACCCCAGATGCCAGCAGGACCACAGATCCGTGTGCCAGTCACCGCTA
CCCAAACCAAAGTAGTACCCCAGGCAGTTGTGGCTACAGTTCCAGTCAAGGGGCAGACTACAGC
GGCCTCTGTGCAACGGCCTGGACCTGCACAGACAGGACTTACAGTGACGAGTCTTCCTGCTGCA
GTTAGCCCCGGGAGCAAGACAGCCATGAGTTCTCCTGGGAGCTCTGCTCCAAGTGCCTCCACAA
CCGCCGTCATTCAGAATGTCACAGGACAGAACATCATCAAGCAGGTGTCAATCACTGGACAGCT
TGGTGTGAAGCCCCAGACAGGCAACAGCATTCCACTCACAGCCACAAACTTCCGTATCCAGGGT
AAAGATGTACTGCGCCTGCCGCCTTCTTCCATCACCACAGATGCCAAGGGCCAGACGGTTCTGA
GAATCACTCCAGACATGATGGCCACACTGGCCAAGTCTCAGGTCACCACAGTCAAGTTGACTCA
GGACCTCTTTGGGGCAGGTAGCGGCACTGCAGGCAAAGGCATCTCTGCTACCTTGCATGTGACT
TCCAACCCTGTCCATGCGGCTGACAGCCCTGCCAAGGCCCCTTCAGCCAGTGTTCCTTCATCAG
CTCCAGCGGGCACTACCGTGGTCAAAGTAACTCCTGATCTCAAGCCAACAGAAACCTCCAGTTC
AGCTTTTCGCTTGATGCCAGCTCTTGGCGTGAGTGTGGCAGATCAGAAGGGGAAGAACACAGTG
GCCTCTTCAGAAGCAAAACCTGCTGCCACAATCCGCATTGTGCAGGGGCTGGGAGTGATGCCTC
CTAAAGCAGGCCAGACCATTACTGTTGCAGCACATGCAAAGCAAGGAGCCTCTGTTGCTGGTGG
GTCTGGAACTGTCCATTCTTCAACTGTGTCCTTACCCAGTATCAATGCCACTGTGTCTAAGACT
GTGGCTGTGGCTTCTGGAGCAACAAGCACCCCCATCAGCATCGGGACTGGAGCCCCCACCGTGC
GACAGGTTCCTGTTAACACTACAGTTGTGTCCACATCCCAGTCTGGGAAGCTGCCTACCAGGAT
CACAGTTCCTCTCTCTGTGATTAGCCAGCCAATGAAGGGCAAGAGCGTGGTCACAGCCCCCATC
ATCAAAGGCAACCTTGGAGCCAATCTCAGTGGGCTGGGTCGCAACATCATCCTCACAACCATGC
CAGCGGGTGCTAAGCTCATTGCTGGCAATAAGCCAGTGAGTTTCCTCACCGCCCAGCAGTTGCA
GCAGCTTCAGCAGCAAGGTCAGGCTACACAGGTACGCATCCAGACTGTGCCAGCATCCCATCTG
CAACAGGGCACAGCTTCCGGCTCCTCCAAAGCCGTGTCCACTGTTGTTGTGACCACAGCTCCAT
CTCCTAAACAAGCACCTGAGCAGCAGTGACTGAGAAGAAAGGCGGCTTCTTTAAGAGACCAGGC
CTGGTTTATCTCGGCTGACAGAAAGGGAGCAGGGAGGCTGCACCATTCTTCTGAGCTGTCCTGC
TTGAGGCAGGGTGGTGGAGAGTGATGGCAACTGTGGCCTAGATTGTGCTGCCACACTCCAGAGT
GAAGCCCTTTTTAGGGTTCCAGGGATGATCTGTTATCCTGGACTACCAGGAAGAGGGAAGGAAC
ATCAGAGTCTGGGGAGGTCACAGTCACACAAGCCGGGGTTACCTCCTGAATGTTGGGTTCCCAG
GGAGCAGGCCTGCCAGTTGGTGAGTGGACCGGCAGGGAATAAGCCTCATTCTGTGTGAGGATTT
TACTTTTTAGTTTCTGATCTTCTCCGTGACTTGTTGAGATGTGAGTTTTGTGTCCAGAGAATTT
TTGTGTAACTTATTTTTTTAAAGAACCTACTCTACGTCTTTTATCAAATAGAAACCTGGGCTTC
AGTGCCCCTAAACTGATCACTTACCCCTTCAACCAGAATGAGAGCATAGCAAGACTCTTAATAG
TTTGGCGGCTTACTTGATAATGGAGAGGTTATATAGTAAGAAAATGTAGGCCTTGAGTTAGCAT
GGACCCCCTCAAGTGGGACTAGTTCAATGCCGTGTACTAAATATGGGCATCTGAATCTCGGTTG
TCCCTATGTCTTCTCTTGTGGGCATTGTCCTTGACAAGCCTGTTCATGGAAGTTCAGAGCTTTT
GGACAGGAGTAGGGGAAGATGAGGTGCTGCTCTCACCGTGCACTTGCTTACAGCCCAGACATTG
CACATTCTCCTTGCTGTAGAACAGCCATTGCTAACCAGACCCTTGGAGCTGGCCACTTGACTGG
GACAGAGAAGAAATGGGGAGGTGGGGGCAGGGGTAGGCACTGCCTGGCAGTGCCATCTTGAGGG
GAAAGGATGTTTTTATTCTGGCCATTTCATATTTCTCAGCCACCACCAGCCACAGACAGGGCTC
AGAAGGGTACTTTACAAAGTCCAAGTACTTAATGTACTAGGTGTATCTTAACGTGTCTTGCTGT
GGTGCAGGGGTGGGTAGGAAAACCTTTCTGCAGGGATAGTGCTTCCCTGTCTCTTTGTGAAAAT
ATCCAAATTATTAAAAACATATCTTTAA

hide sequence

RefSeq Acc Id:

XM_063265377 ⟹ XP_063121447

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,090,275 - 38,121,503 (+)	NCBI

RefSeq Acc Id:

XM_063265378 ⟹ XP_063121448

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,089,574 - 38,121,503 (+)	NCBI

RefSeq Acc Id:

XM_063265379 ⟹ XP_063121449

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,090,275 - 38,121,503 (+)	NCBI

RefSeq Acc Id:

XM_063265380 ⟹ XP_063121450

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,089,574 - 38,121,503 (+)	NCBI

RefSeq Acc Id:

XM_063265381 ⟹ XP_063121451

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,090,275 - 38,121,503 (+)	NCBI

RefSeq Acc Id:

XM_063265382 ⟹ XP_063121452

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,089,574 - 38,121,503 (+)	NCBI

RefSeq Acc Id:

XM_063265383 ⟹ XP_063121453

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,089,574 - 38,121,503 (+)	NCBI

RefSeq Acc Id:

XM_063265384 ⟹ XP_063121454

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,089,574 - 38,121,503 (+)	NCBI

RefSeq Acc Id:

XM_063265387 ⟹ XP_063121457

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,090,235 - 38,121,503 (+)	NCBI

RefSeq Acc Id:

XM_063265388 ⟹ XP_063121458

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,089,574 - 38,121,503 (+)	NCBI

RefSeq Acc Id:

XM_063265389 ⟹ XP_063121459

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,089,574 - 38,121,503 (+)	NCBI

RefSeq Acc Id:

XM_063265390 ⟹ XP_063121460

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,090,235 - 38,121,503 (+)	NCBI

RefSeq Acc Id:

XM_063265391 ⟹ XP_063121461

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,090,235 - 38,121,503 (+)	NCBI

RefSeq Acc Id:

XM_063265392 ⟹ XP_063121462

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,089,574 - 38,121,503 (+)	NCBI

RefSeq Acc Id:

XM_063265393 ⟹ XP_063121463

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,089,574 - 38,121,503 (+)	NCBI

RefSeq Acc Id:

XM_063265394 ⟹ XP_063121464

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,092,796 - 38,121,503 (+)	NCBI

RefSeq Acc Id:

XM_063265396 ⟹ XP_063121466

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,099,783 - 38,121,503 (+)	NCBI

RefSeq Acc Id:

XM_063265397 ⟹ XP_063121467

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,099,783 - 38,121,503 (+)	NCBI

RefSeq Acc Id:

XM_063265398 ⟹ XP_063121468

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,099,783 - 38,121,503 (+)	NCBI

RefSeq Acc Id:

XM_063265399 ⟹ XP_063121469

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	38,106,595 - 38,121,503 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101603	(Get FASTA)	NCBI Sequence Viewer
	NP_001423420	(Get FASTA)	NCBI Sequence Viewer
	NP_001423421	(Get FASTA)	NCBI Sequence Viewer
	NP_001423422	(Get FASTA)	NCBI Sequence Viewer
	NP_001423423	(Get FASTA)	NCBI Sequence Viewer
	NP_001423424	(Get FASTA)	NCBI Sequence Viewer
	NP_001423425	(Get FASTA)	NCBI Sequence Viewer
	NP_001423426	(Get FASTA)	NCBI Sequence Viewer
	NP_001423427	(Get FASTA)	NCBI Sequence Viewer
	NP_001423428	(Get FASTA)	NCBI Sequence Viewer
	NP_001423429	(Get FASTA)	NCBI Sequence Viewer
	XP_006242815	(Get FASTA)	NCBI Sequence Viewer
	XP_006242818	(Get FASTA)	NCBI Sequence Viewer
	XP_006242821	(Get FASTA)	NCBI Sequence Viewer
	XP_006242822	(Get FASTA)	NCBI Sequence Viewer
	XP_063121447	(Get FASTA)	NCBI Sequence Viewer
	XP_063121448	(Get FASTA)	NCBI Sequence Viewer
	XP_063121449	(Get FASTA)	NCBI Sequence Viewer
	XP_063121450	(Get FASTA)	NCBI Sequence Viewer
	XP_063121451	(Get FASTA)	NCBI Sequence Viewer
	XP_063121452	(Get FASTA)	NCBI Sequence Viewer
	XP_063121453	(Get FASTA)	NCBI Sequence Viewer
	XP_063121454	(Get FASTA)	NCBI Sequence Viewer
	XP_063121457	(Get FASTA)	NCBI Sequence Viewer
	XP_063121458	(Get FASTA)	NCBI Sequence Viewer
	XP_063121459	(Get FASTA)	NCBI Sequence Viewer
	XP_063121460	(Get FASTA)	NCBI Sequence Viewer
	XP_063121461	(Get FASTA)	NCBI Sequence Viewer
	XP_063121462	(Get FASTA)	NCBI Sequence Viewer
	XP_063121463	(Get FASTA)	NCBI Sequence Viewer
	XP_063121464	(Get FASTA)	NCBI Sequence Viewer
	XP_063121466	(Get FASTA)	NCBI Sequence Viewer
	XP_063121467	(Get FASTA)	NCBI Sequence Viewer
	XP_063121468	(Get FASTA)	NCBI Sequence Viewer
	XP_063121469	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL83310	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000011223
	ENSRNOP00000011223.6
	ENSRNOP00000101400.1

RefSeq Acc Id:

NP_001101603 ⟸ NM_001108133

- UniProtKB:

A6JYG5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDSLDHMLTDPLELGPCGDGHSTGIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSLSTWQEVLSD
SQREHLQQFLPQFPTDTVEQQNELILALFSGENFRFGNPLHIAQKLFRDGHFNPEVVKYRQLCF
KSQYKRYLSSQQQYFHRLLRQILASRSDLLEMARTSGPALPFRHKHHSPSRSPEEREWRTQQRY
LKVLREVKEECGDTALSSDEEDLSSWLPSSPARSPSPAVPLRVVPTLSTTDMKTADKIELGDSD
LKLMLKKHHEKRKHQPDHPDLLTGDLTLSDIMTRVNAGRKGSLAALYDLAVLKKKVKEKEEKKK
KKIKLIKSEAEDLAEPLSNTEGVPTLSQAPSPLAISSIKEEPLEDIKPCLGINEISSSFFSLLL
EILLLESQASLPMLEDRVLDWQSSPASSLNSWFSAAPNWAELVLPALQYLAGESRAVPSSFSPF
VEFKEKTQQWKLLGQSQDNEKELAALFHLWLETKDQAFCKENEDSSDAMTPVPRVRTDYVVRPS
TGEEKRVFQEQERYRYSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYV
TILSLVRDAAARLPNGEGTRAEICELLKDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYD
IGRKLWIYLHRDRSEEEFERIHQAQAAAAKARKALQQKPKPPSKVKSSNKEGSVKGLSGPSEPS
QMSLSDSSMPPTPVTPVTPTTPALPTPISPPPVSAVSRSGSTTVSEPAKSSSGVLLVSSPTMPQ
LGTMLSPASIQTPPSSQTTARVVSHSSSAGLPQVRVVAQPSLPAVSQQSVGPAQPLPQMPAGPQ
IRVPVTATQTKVVPQAVVATVPVKGQTTAASVQRPGPAQTGLTVTSLPAAVSPGSKTAMSSPGS
SAPSASTTAVIQNVTGQNIIKQVSITGQLGVKPQTGNSIPLTATNFRIQGKDVLRLPPSSITTD
AKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGAGSGTAGKGISATLHVTSNPVHAADSPAKAP
SASVPSSAPAGTTVVKVTPDLKPTETSSSAFRLMPALGVSVADQKGKNTVASSEAKPAATIRIV
QGLGVMPPKAGQTITVAAHAKQGASVAGGSGTVHSSTVSLPSINATVSKTVAVASGATSTPISI
GTGAPTVRQVPVNTTVVSTSQSGKLPTRITVPLSVISQPMKGKSVVTAPIIKGNLGANLSGLGR
NIILTTMPAGAKLIAGNKPVSFLTAQQLQQLQQQGQATQVRIQTVPASHLQQGTASGSSKAVST
VVVTTAPSPKQAPEQQ

hide sequence

RefSeq Acc Id:

XP_006242818 ⟸ XM_006242756

- Peptide Label:

isoform X3

- Sequence:

show sequence

MDSLDHMLTDPLELGPCGDGHSTGIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSLSTWQEVLSD
SQREHLQQFLPQFPTDTVEQQNELILALFSGENFRFGNPLHIAQKLFRDGHFNPEVVKYRQLCF
KSQYKRYLSSQQQYFHRLLRQILASRSDLLEMARTSGPALPFRHKHHSPSRSPEEREWRTQQRY
LKVLREVKEECGDTALSSDEEATLDLQEKFSFEDLSSWLPSSPARSPSPAVPLRVVPTLSTTDM
KTADKIELGDSDLKLMLKKHHEKRKHQPDHPDLLTGDLTLSDIMTRVNAGRKGSLAALYDLAVL
KKKVKEKEEKKKKKIKLIKSEAEDLAEPLSNTEGVPTLSQAPSPLAISSIKEEPLEDIKPCLGI
NEISSSFFSLLLEILLLESQASLPMLEDRVLDWQSSPASSLNSWFSAAPNWAELVLPALQYLAG
ESRAVPSSFSPFVEFKEKTQQWKLLGQSQDNEKELAALFHLWLETKDQAFCKENEDSSDAMTPV
PRVRTDYVVRPSTGEEKRVFQEQERYRYSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKARE
HSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEICELLKDSQFLAPDVTSTQVNTVVSGALDR
LHYEKDPCVKYDIGRKLWIYLHRDRSEEEFERIHQAQAAAAKARKALQQKPKPPSKVKSSNKEG
SVKGLSGPSEPSQMSLSDSSMPPTPVTPVTPTTPALPTPISPPPVSAVSRSGSTTVSEPAKSSS
GVLLVSSPTMPQLGTMLSPASIQTPPSSQTTARVVSHSSSAGLPQVRVVAQPSLPAVSQQSVGP
AQPLPQMPAGPQIRVPVTATQTKVVPQAVVATVPVKGQTTAASVQRPGPAQTGLTVTSLPAAVS
PGSKTAMSSPGSSAPSASTTAVIQNVTGQNIIKQVSITGQLGVKPQTGNSIPLTATNFRIQGKD
VLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGAGSGTAGKGISATLHVTSN
PVHAADSPAKAPSASVPSSAPAGTTVVKVTPDLKPTETSSSAFRLMPALGVSVADQKGKNTVAS
SEAKPAATIRIVQGLGVMPPKAGQTITVAAHAKQGASVAGGSGTVHSSTVSLPSINATVSKTVA
VASGATSTPISIGTGAPTVRQVPVNTTVVSTSQSGKLPTRITVPLSVISQPMKGKSVVTAPIIK
GNLGANLSGLGRNIILTTMPAGAKLIAGNKPVSFLTAQQLQQLQQQGQATQVRIQTVPASHLQQ
GTASGSSKAVSTVVVTTAPSPKQAPEQQ

hide sequence

RefSeq Acc Id:

XP_006242815 ⟸ XM_006242753

- Peptide Label:

isoform X1

- Sequence:

show sequence

MDSLDHMLTDPLELGPCGDGHSTGIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSLSTWQEVLSD
SQREHLQQFLPQFPTDTVEQQNELILALFSGENFRFGNPLHIAQKLFRDGHFNPEVVKYRQLCF
KSQYKRYLSSQQQYFHRLLRQILASRSDLLEMARTSGPALPFRHKHHSPSRSPEEREWRTQQRY
LKVLREVKEECGDTALSSDEEATLDLQEKFSFEDLSSWLPSSPARSPSPAVPLRVVPTLSTTDM
KTADKIELGDSDLKLMLKKHHEKRKHQPDHPDLLTGDLTLSDIMTRVNAGRKGSLAALYDLAVL
KKKVKEKEEKKKKKIKLIKSEAEDLAEPLSNTEGVPTLSQAPSPLAISSIKEEPLEDIKPCLGI
NEISSSFFSLLLEILLLESQASLPMLEDRVLDWQSSPASSLNSWFSAAPNWAELVLPALQYLAG
ESRAVPSSFSPFVEFKEKTQQWKLLGQSQDNEKELAALFHLWLETKDQAFCKQENEDSSDAMTP
VPRVRTDYVVRPSTGEEKRVFQEQERYRYSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAR
EHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEICELLKDSQFLAPDVTSTQVNTVVSGALD
RLHYEKDPCVKYDIGRKLWIYLHRDRSEEEFERIHQAQAAAAKARKALQQKPKPPSKVKSSNKE
GSVKGLSGPSEPSQMSLSDSSMPPTPVTPVTPTTPALPTPISPPPVSAVSRSGSTTVSEPAKSS
SGVLLVSSPTMPQLGTMLSPASIQTPPSSQTTARVVSHSSSAGLPQVRVVAQPSLPAVSQQSVG
PAQPLPQMPAGPQIRVPVTATQTKVVPQAVVATVPVKGQTTAASVQRPGPAQTGLTVTSLPAAV
SPGSKTAMSSPGSSAPSASTTAVIQNVTGQNIIKQVSITGQLGVKPQTGNSIPLTATNFRIQGK
DVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGAGSGTAGKGISATLHVTS
NPVHAADSPAKAPSASVPSSAPAGTTVVKVTPDLKPTETSSSAFRLMPALGVSVADQKGKNTVA
SSEAKPAATIRIVQGLGVMPPKAGQTITVAAHAKQGASVAGGSGTVHSSTVSLPSINATVSKTV
AVASGATSTPISIGTGAPTVRQVPVNTTVVSTSQSGKLPTRITVPLSVISQPMKGKSVVTAPII
KGNLGANLSGLGRNIILTTMPAGAKLIAGNKPVSFLTAQQLQQLQQQGQATQVRIQTVPASHLQ
QGTASGSSKAVSTVVVTTAPSPKQAPEQQ

hide sequence

RefSeq Acc Id:	XP_006242821 ⟸ XM_006242759
- Peptide Label:	isoform X9
- UniProtKB:	A0A0G2K0N5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDSLDHMLTDPLELGPCGDGHSTGIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSLSTWQEVLSD SQREHLQQFLPQFPTDTVEQQNELILALFSGENFRFGNPLHIAQKLFRDGHFNPEVVKYRQLCF KSQYKRYLSSQQQYFHRLLRQILASRSDLLEMARTSGPALPFRHKHHSPSRSPEEREWRTQQRY LKVLREVKEECGDTALSSDEEDLSSWLPSSPARSPSPAVPLRVVPTLSTTDMKTADKIELGDSD LKLMLKKHHEKRKHQPDHPDLLTGDLTLSDIMTRVNAGRKGSLAALYDLAVLKKKVKEKEEKKK KKIKLIKSEAEDLAEPLSNTEGVPTLSQAPSPLAISSIKEEPLEDIKPCLGINEISSSFFSLLL EILLLESQASLPMLEDRVLDWQSSPASSLNSWFSAAPNWAELVLPALQYLAGESRAVPSSFSPF VEFKEKTQQWKLLGQSQDNEKELAALFHLWLETKDQAFCKQENEDSSDAMTPVPRVRTDYVVRP STGEEKRVFQEQERYRYSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAY VTILSLVRDAAARLPNGEGTRAEICELLKDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKY DIGRKLWIYLHRDRSEEEFERIHQAQAAAAKARKALQQKPKPPSKVKSSNKEGSVKGLSGPSEP SQMSLSDSSMPPTPVTPVTPTTPALPTPISPPPVSAVSRSGSTTVSEPAKSSSGVLLVSSPTMP QLGTMLSPASIQTPPSSQTTARVVSHSSSAGLPQVRVVAQPSLPAVSQQSVGPAQPLPQMPAGP QIRVPVTATQTKVVPQAVVATVPVKGQTTAASVQRPGPAQTGLTVTSLPAAVSPGSKTAMSSPG SSAPSASTTAVIQNVTGQNIIKQVSITGQLGVKPQTGNSIPLTATNFRIQGKDVLRLPPSSITT DAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGAGSGTAGKGISATLHVTSNPVHAADSPAKA PSASVPSSAPAGTTVVKVTPDLKPTETSSSAFRLMPALGVSVADQKGKNTVASSEAKPAATIRI VQGLGVMPPKAGQTITVAAHAKQGASVAGGSGTVHSSTVSLPSINATVSKTVAVASGATSTPIS IGTGAPTVRQVPVNTTVVSTSQSGKLPTRITVPLSVISQPMKGKSVVTAPIIKGNLGANLSGLG RNIILTTMPAGAKLIAGNKPVSFLTAQQLQQLQQQGQATQVRIQTVPASHLQQGTASGSSKAVS TVVVTTAPSPKQAPEQQ hide sequence

RefSeq Acc Id:

XP_006242822 ⟸ XM_006242760

- Peptide Label:

isoform X10

- Sequence:

show sequence

MDSLDHMLTDPLELGPCGDGHSTGIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSLSTWQEVLSD
SQREHLQQFLPQFPTDTVEQQNELILALFSGENFRFGNPLHIAQKLFRDGHFNPEVVKYRQLCF
KSQYKRYLSSQQQYFHRLLRQILASRSDLLEMARTSGPALPFRHKHHSPSRSPEEREWRTQQRY
LKVLREVKEECGDTALSSDEEDLSSWLPSSPARSPSPAVPLRVVPTLSTTDMKTADKIELGDSD
LKLMLKKHHEKRKHQPDHPDLLTGDLTLSDIMTRVNAGRKGSLAALYDLAVLKKKVKEKEEKKK
KKIKLIKSEAEDLAEPLSNTEGVPTLSQAPSPLAISSIKEEPLEDIKPCLGINEISSSFFSLLL
EILLLESQASLPMLEDRVLDWQSSPASSLNSWFSAAPNWAELVLPALQYLAGESRAVPSSFSPF
VEFKEKTQQWKLLGQSQDNEKELAALFHLWLETKDQAFCKENEDSSDAMTPVPRVRTDYVVRPS
TGEEKRVFQEQERYRYSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYV
TILSLVRDAAARLPNGEGTRAEICELLKDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYD
IGRKLWIYLHRDRSEEEFERIHQAQAAAAKARKALQQKPKPPSKVKSSNKEGSVKGLSGPSEPS
QMSLSDSSMPPTPVTPVTPTTPALPTPISPPPVSAVSRSGSTTVSEPAKSSSGVLLVSSPTMPQ
LGTMLSPASIQTPPSSQTTARVVSHSSSAGLPQVRVVAQPSLPAVSQQSVGPAQPLPQMPAGPQ
IRVPVTATQTKVVPQAVVATVPVKGQTTAASVQRPGPAQTGLTVTSLPAAVSPGSKTAMSSPGS
SAPSASTTAVIQNVTGQNIIKQVSITGQLGVKPQTGNSIPLTATNFRIQGKDVLRLPPSSITTD
AKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGAGSGTAGKGISATLHVTSNPVHAADSPAKAP
SASVPSSAPAGTTVVKVTPDLKPTETSSSAFRLMPALGVSVADQKGKNTVASSEAKPAATIRIV
QGLGVMPPKAGQTITVAAHAKQGASVAGGSGTVHSSTVSLPSINATVSKTVAVASGATSTPISI
GTGAPTVRQVPVNTTVVSTSQSGKLPTRITVPLSVISQPMKGKSVVTAPIIKGNLGANLSGLGR
NIILTTMPAGAKLIAGNKPVSFLTAQQLQQLQQQGQATQVRIQTVPASHLQQGTASGSSKAVST
VVVTTAPSPKQAPEQQ

hide sequence

Ensembl Acc Id:

ENSRNOP00000071517 ⟸ ENSRNOT00000083659

Ensembl Acc Id:

ENSRNOP00000011223 ⟸ ENSRNOT00000011223

RefSeq Acc Id:	XP_063121450 ⟸ XM_063265380
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063121453 ⟸ XM_063265383
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063121448 ⟸ XM_063265378
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063121452 ⟸ XM_063265382
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063121454 ⟸ XM_063265384
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063121459 ⟸ XM_063265389
- Peptide Label:	isoform X12

RefSeq Acc Id:	XP_063121463 ⟸ XM_063265393
- Peptide Label:	isoform X14

RefSeq Acc Id:	XP_063121458 ⟸ XM_063265388
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_063121462 ⟸ XM_063265392
- Peptide Label:	isoform X13

RefSeq Acc Id:	XP_063121457 ⟸ XM_063265387
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_063121460 ⟸ XM_063265390
- Peptide Label:	isoform X12

RefSeq Acc Id:	XP_063121461 ⟸ XM_063265391
- Peptide Label:	isoform X10
- UniProtKB:	A6JYG5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121447 ⟸ XM_063265377
- Peptide Label:	isoform X1
- UniProtKB:	D4A421 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121449 ⟸ XM_063265379
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063121451 ⟸ XM_063265381
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063121464 ⟸ XM_063265394
- Peptide Label:	isoform X15

RefSeq Acc Id:	XP_063121466 ⟸ XM_063265396
- Peptide Label:	isoform X16

RefSeq Acc Id:	XP_063121467 ⟸ XM_063265397
- Peptide Label:	isoform X17

RefSeq Acc Id:	XP_063121468 ⟸ XM_063265398
- Peptide Label:	isoform X18

RefSeq Acc Id:	XP_063121469 ⟸ XM_063265399
- Peptide Label:	isoform X19

Ensembl Acc Id:

ENSRNOP00000101400 ⟸ ENSRNOT00000152725

Protein Domains

DEUBAD

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K0N5-F1-model_v2	AlphaFold	A0A0G2K0N5	1-1297	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13695827

Promoter ID:

EPDNEW_R6351

Type:

initiation region

Name:

Nfrkb_1

Description:

nuclear factor related to kappa B binding protein

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	8	32,530,480 - 32,530,540	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310558	AgrOrtholog
BioCyc Gene	G2FUF-31255	BioCyc
Ensembl Genes	ENSRNOG00000008278	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000011223	ENTREZGENE
	ENSRNOT00000011223.8	UniProtKB/TrEMBL
	ENSRNOT00000152725.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.10.2430	UniProtKB/TrEMBL
InterPro	DEUBAD_dom	UniProtKB/TrEMBL
	NFRKB	UniProtKB/TrEMBL
	NFRKB_winged_dom	UniProtKB/TrEMBL
	NFRKB_winged_sf	UniProtKB/TrEMBL
KEGG Report	rno:315523	UniProtKB/TrEMBL
NCBI Gene	315523	ENTREZGENE
PANTHER	NUCLEAR FACTOR RELATED TO KAPPA-B-BINDING PROTEIN	UniProtKB/TrEMBL
	PTHR13052	UniProtKB/TrEMBL
Pfam	NFRKB_winged	UniProtKB/TrEMBL
	WH_2nd_NFRKB	UniProtKB/TrEMBL
PhenoGen	Nfrkb	PhenoGen
PROSITE	DEUBAD	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000008278	RatGTEx
UniProt	A0A0G2K0N5	ENTREZGENE
	A0ABK0L0B4_RAT	UniProtKB/TrEMBL
	A6JYG5	ENTREZGENE, UniProtKB/TrEMBL
	D4A421	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Nfrkb	nuclear factor related to kappa B binding protein	Nfrkb_predicted	nuclear factor related to kappa B binding protein (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Nfrkb_predicted	nuclear factor related to kappa B binding protein (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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RGD Manual Annotations