Cpm (carboxypeptidase M) - Rat Genome Database

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Gene: Cpm (carboxypeptidase M) Rattus norvegicus
Analyze
Symbol: Cpm
Name: carboxypeptidase M
RGD ID: 1310532
Description: Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in peptide metabolic process and protein processing. Predicted to be located in plasma membrane and side of membrane. Predicted to be active in extracellular space. Orthologous to human CPM (carboxypeptidase M); PARTICIPATES IN kallikrein-kinin cascade pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 3,4-methylenedioxymethamphetamine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC314855
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8755,111,599 - 55,172,114 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl755,111,599 - 55,172,114 (+)EnsemblGRCr8
mRatBN7.2753,225,647 - 53,286,220 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl753,225,696 - 53,286,220 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx755,132,408 - 55,192,931 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0757,335,524 - 57,396,045 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0757,113,401 - 57,173,922 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0760,654,350 - 60,714,620 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl760,654,350 - 60,714,620 (+)Ensemblrn6Rnor6.0
Rnor_5.0760,654,168 - 60,714,583 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4756,931,920 - 56,992,248 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera749,997,342 - 50,057,583 (+)NCBICelera
RGSC_v3.1756,952,660 - 57,008,965 (+)NCBI
Cytogenetic Map7q22NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-hydroxypropanoic acid  (ISO)
3,4-methylenedioxymethamphetamine  (EXP,ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
8-Br-cAMP  (ISO)
acetamide  (EXP)
actinomycin D  (ISO)
afimoxifene  (ISO)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (EXP)
amitrole  (EXP)
amphetamine  (EXP)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
cadmium dichloride  (ISO)
carbon nanotube  (ISO)
chlordecone  (ISO)
chloroprene  (ISO)
chlorpyrifos  (ISO)
ciglitazone  (EXP)
ciguatoxin CTX1B  (ISO)
cisplatin  (ISO)
cobalt dichloride  (EXP)
copper atom  (EXP)
copper(0)  (EXP)
Cuprizon  (EXP)
cyclosporin A  (ISO)
diethylstilbestrol  (ISO)
dimethyl sulfoxide  (EXP)
dimethylarsinic acid  (EXP)
dioxygen  (ISO)
diquat  (ISO)
dorsomorphin  (ISO)
entinostat  (ISO)
ethanol  (ISO)
furan  (EXP)
gardiquimod  (ISO)
glyphosate  (ISO)
hydrogen peroxide  (ISO)
ivermectin  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
nitrofen  (EXP)
Nutlin-3  (ISO)
okadaic acid  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
progesterone  (ISO)
protein kinase inhibitor  (ISO)
rac-lactic acid  (ISO)
raloxifene  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sulforaphane  (ISO)
tamoxifen  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (ISO)
theophylline  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
triclosan  (ISO)
triptonide  (ISO)
tungsten  (ISO)
valproic acid  (ISO)
vitamin E  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
proteolysis  (IEA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. The kallikrein-kinin system: current and future pharmacological targets. Moreau ME, etal., J Pharmacol Sci. 2005 Sep;99(1):6-38.
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:19581412   PMID:23376485   PMID:23533145  


Genomics

Comparative Map Data
Cpm
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8755,111,599 - 55,172,114 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl755,111,599 - 55,172,114 (+)EnsemblGRCr8
mRatBN7.2753,225,647 - 53,286,220 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl753,225,696 - 53,286,220 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx755,132,408 - 55,192,931 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0757,335,524 - 57,396,045 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0757,113,401 - 57,173,922 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0760,654,350 - 60,714,620 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl760,654,350 - 60,714,620 (+)Ensemblrn6Rnor6.0
Rnor_5.0760,654,168 - 60,714,583 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4756,931,920 - 56,992,248 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera749,997,342 - 50,057,583 (+)NCBICelera
RGSC_v3.1756,952,660 - 57,008,965 (+)NCBI
Cytogenetic Map7q22NCBI
CPM
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381268,842,197 - 68,963,469 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1268,842,197 - 68,971,570 (-)Ensemblhg38GRCh38
GRCh371269,235,977 - 69,357,249 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361267,531,222 - 67,643,287 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341267,531,224 - 67,613,246NCBI
Celera1268,908,769 - 69,020,812 (-)NCBICelera
Cytogenetic Map12q15NCBI
HuRef1266,295,534 - 66,407,539 (-)NCBIHuRef
CHM1_11269,213,548 - 69,325,636 (-)NCBICHM1_1
T2T-CHM13v2.01268,821,776 - 68,943,048 (-)NCBIT2T-CHM13v2.0
Cpm
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910117,465,405 - 117,523,257 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10117,465,405 - 117,523,257 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm3810117,629,500 - 117,687,352 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10117,629,500 - 117,687,352 (+)Ensemblmm10GRCm38
MGSCv3710117,066,556 - 117,124,408 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv3610117,032,084 - 117,090,343 (+)NCBIMGSCv36mm8
Celera10119,567,183 - 119,625,204 (+)NCBICelera
Cytogenetic Map10D2NCBI
cM Map1066.19NCBI
Cpm
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545815,296,783 - 15,360,753 (-)Ensembl
ChiLan1.0NW_00495545815,296,783 - 15,360,753 (-)NCBIChiLan1.0ChiLan1.0
CPM
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21076,868,706 - 76,951,136 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11276,858,348 - 76,947,533 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01266,367,023 - 66,445,801 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11269,147,579 - 69,225,596 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1269,147,579 - 69,225,283 (-)EnsemblpanPan2panpan1.1
CPM
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11010,968,830 - 10,999,887 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1010,900,937 - 10,974,726 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01011,092,652 - 11,165,951 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1011,085,709 - 11,165,621 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11010,960,274 - 11,033,677 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01011,206,263 - 11,279,965 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01011,328,446 - 11,402,120 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Cpm
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494547,306,534 - 47,371,888 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365456,737,851 - 6,803,662 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365456,739,658 - 6,803,501 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CPM
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl533,151,388 - 33,264,317 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1533,170,094 - 33,264,362 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
CPM
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11164,475,842 - 64,556,877 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1164,478,106 - 64,556,278 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666037181,146,800 - 181,226,452 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cpm
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624948369,612 - 437,375 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_004624948369,237 - 441,371 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Cpm
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11195,729,271 - 195,786,249 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Cpm
362 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:709
Count of miRNA genes:291
Interacting mature miRNAs:389
Transcripts:ENSRNOT00000044413
Prediction methods:Microtar, Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7411569Bw137Body weight QTL 1370.001body mass (VT:0001259)body weight gain (CMO:0000420)72380760668807606Rat
10053722Scort27Serum corticosterone level QTL 272.410.0083blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)74511390390113903Rat
1578652Bmd15Bone mineral density QTL 155.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)71051708662346019Rat
1549840Bss5Bone structure and strength QTL 59.8femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)72663805771638057Rat
1300127Srn1Serum renin concentration QTL 13.87blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)72417947886817926Rat
10059605Kidm47Kidney mass QTL 472.910.05kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)74913799967614020Rat
1357336Gluco6Glucose level QTL 63.4blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)75170064396700643Rat
1358361Sradr5Stress Responsive Adrenal Weight QTL 55.55adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)731770293110435881Rat
2298547Neuinf5Neuroinflammation QTL 53.7nervous system integrity trait (VT:0010566)spinal cord Cd74 protein level (CMO:0002131)71011291660150541Rat
631513Scl7Serum cholesterol level QTL 74.1blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)73984590284845902Rat
10755453Coatc12Coat color QTL 120coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)73299870277998702Rat
631504Cm27Cardiac mass QTL 273.45heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)746307490127866166Rat
2317059Aia15Adjuvant induced arthritis QTL 152.46joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)74968283263890004Rat
7411605Foco14Food consumption QTL 1424.10.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)73617876481178764Rat
1643004Pain2Pain QTL 21mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)71011291699900612Rat
738030Anxrr8Anxiety related response QTL 84.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)74847504993475049Rat
1300149Cm6Cardiac mass QTL 64.09heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)71104117804Rat
631534Lnnr1Liver neoplastic nodule remodeling QTL 13.850.001liver integrity trait (VT:0010547)liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)73617876481178764Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)71509236116977875Rat
61357Bp38Blood pressure QTL 381.60.052arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)740540077123682549Rat
2303629Vencon3Ventilatory control QTL 37.25respiration trait (VT:0001943)respiration rate (CMO:0000289)74299622658678836Rat
70190Mcs6Mammary carcinoma susceptibility QTL 62.29mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)72862457565788017Rat
2316947Rf58Renal function QTL 587.8kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)749682832115766396Rat
1300132Bp182Blood pressure QTL 1823.49arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)72154197786817926Rat
2316955Stl24Serum triglyceride level QTL 247.1blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)749682832115766396Rat
1300138Hrtrt9Heart rate QTL 94.72heart pumping trait (VT:2000009)heart rate (CMO:0000002)71049882055498820Rat
738033Anxrr6Anxiety related response QTL 64.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)71746044762460447Rat
2316952Pur22Proteinuria QTL 225.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)749682832115766396Rat
2303582Gluco53Glucose level QTL 533blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)74860308793603087Rat
70207Niddm31Non-insulin dependent diabetes mellitus QTL 313.9blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)72005723265057232Rat
61439Cia8Collagen induced arthritis QTL 85.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)72718291472182914Rat

Markers in Region
D7Rat167  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2753,106,096 - 53,106,333 (+)MAPPERmRatBN7.2
Rnor_6.0760,534,733 - 60,534,969NCBIRnor6.0
Rnor_5.0760,535,918 - 60,536,154UniSTSRnor5.0
RGSC_v3.4756,810,778 - 56,811,014UniSTSRGSC3.4
RGSC_v3.4756,810,777 - 56,811,014RGDRGSC3.4
RGSC_v3.1756,831,428 - 56,831,767RGD
FHH x ACI Map731.23RGD
FHH x ACI Map731.23UniSTS
Cytogenetic Map7q22UniSTS
BI282012  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2753,284,503 - 53,284,709 (+)MAPPERmRatBN7.2
Rnor_6.0760,712,905 - 60,713,110NCBIRnor6.0
Rnor_5.0760,712,868 - 60,713,073UniSTSRnor5.0
RGSC_v3.4756,990,533 - 56,990,738UniSTSRGSC3.4
Celera750,055,868 - 50,056,073UniSTS
RH 3.4 Map7483.0UniSTS
Cytogenetic Map7q22UniSTS
RH140619  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2753,285,993 - 53,286,173 (+)MAPPERmRatBN7.2
Rnor_6.0760,714,394 - 60,714,573NCBIRnor6.0
Rnor_5.0760,714,357 - 60,714,536UniSTSRnor5.0
RGSC_v3.4756,992,022 - 56,992,201UniSTSRGSC3.4
Celera750,057,357 - 50,057,536UniSTS
RH 3.4 Map7487.7UniSTS
Cytogenetic Map7q22UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 164 91 90 59 87 59 6 351 187 11 143 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000044413   ⟹   ENSRNOP00000040541
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl760,654,350 - 60,714,620 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000115341   ⟹   ENSRNOP00000078474
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl753,225,696 - 53,286,220 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000144094   ⟹   ENSRNOP00000106174
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl755,111,599 - 55,172,114 (+)Ensembl
RefSeq Acc Id: NM_001108098   ⟹   NP_001101568
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8755,111,599 - 55,172,114 (+)NCBI
mRatBN7.2753,225,696 - 53,286,220 (+)NCBI
Rnor_6.0760,654,350 - 60,714,620 (+)NCBI
Rnor_5.0760,654,168 - 60,714,583 (+)NCBI
RGSC_v3.4756,931,920 - 56,992,248 (+)RGD
Celera749,997,342 - 50,057,583 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001101568 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM16618 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000106174
  ENSRNOP00000106174.1
RefSeq Acc Id: NP_001101568   ⟸   NM_001108098
- Peptide Label: precursor
- UniProtKB: D4A9Q5 (UniProtKB/TrEMBL),   A6IGT0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000040541   ⟸   ENSRNOT00000044413
Ensembl Acc Id: ENSRNOP00000078474   ⟸   ENSRNOT00000115341
Ensembl Acc Id: ENSRNOP00000106174   ⟸   ENSRNOT00000144094
Protein Domains
Peptidase M14

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4A9Q5-F1-model_v2 AlphaFold D4A9Q5 1-443 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13695215
Promoter ID:EPDNEW_R5739
Type:single initiation site
Name:Cpm_1
Description:carboxypeptidase M
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0760,654,352 - 60,654,412EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1310532 AgrOrtholog
BioCyc Gene G2FUF-33986 BioCyc
Ensembl Genes ENSRNOG00000034134 Ensembl
  ENSRNOG00000066159 Ensembl
  ENSRNOG00000084862 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000144094 ENTREZGENE
  ENSRNOT00000144094.1 UniProtKB/TrEMBL
Gene3D-CATH Carboxypeptidase-like, regulatory domain UniProtKB/TrEMBL
  Zn peptidases UniProtKB/TrEMBL
InterPro CarboxyPept-like_regulatory UniProtKB/TrEMBL
  CARBOXYPEPT_ZN_1 UniProtKB/TrEMBL
  CARBOXYPEPT_ZN_2 UniProtKB/TrEMBL
  CPM_N UniProtKB/TrEMBL
  Peptidase_M14 UniProtKB/TrEMBL
  Peptidase_M14_domain UniProtKB/TrEMBL
KEGG Report rno:314855 UniProtKB/TrEMBL
NCBI Gene 314855 ENTREZGENE
PANTHER CARBOXYPEPTIDASE M UniProtKB/TrEMBL
  PROTEASE M14 CARBOXYPEPTIDASE UniProtKB/TrEMBL
Pfam CarboxypepD_reg UniProtKB/TrEMBL
  Peptidase_M14 UniProtKB/TrEMBL
PhenoGen Cpm PhenoGen
PRINTS CRBOXYPTASEA UniProtKB/TrEMBL
PROSITE CARBOXYPEPT_ZN_1 UniProtKB/TrEMBL
  CARBOXYPEPT_ZN_2 UniProtKB/TrEMBL
  PEPTIDASE_M14 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000034134 RatGTEx
  ENSRNOG00000066159 RatGTEx
  ENSRNOG00000084862 RatGTEx
SMART Zn_pept UniProtKB/TrEMBL
Superfamily-SCOP CarboxypepD_reg UniProtKB/TrEMBL
  Zn-dependent exopeptidases UniProtKB/TrEMBL
UniProt A0ABK0L7K6_RAT UniProtKB/TrEMBL
  A6IGT0 ENTREZGENE, UniProtKB/TrEMBL
  D4A9Q5 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Cpm  carboxypeptidase M   Cpm_predicted  carboxypeptidase M (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Cpm_predicted  carboxypeptidase M (predicted)      Symbol and Name status set to approved 70820 APPROVED