Zfp358 (zinc finger protein 358) - Rat Genome Database

Name: Zfp358
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Zfp358 (zinc finger protein 358) Rattus norvegicus

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Symbol:

Zfp358

Name:

zinc finger protein 358

RGD ID:

1310416

Description:

Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II; regulation of cytokine production; and regulation of immune system process. Predicted to be active in nucleoplasm. Orthologous to human ZNF358 (zinc finger protein 358); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine; acrylamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC360754

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ZNF358 (zinc finger protein 358)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Treefam
Mus musculus (house mouse):	Zfp358 (zinc finger protein 358)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Znf358 (zinc finger protein 358)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ZNF358 (zinc finger protein 358)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SAXO5 (stabilizer of axonemal microtubules 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Znf358 (zinc finger protein 358)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ZNF358 (zinc finger protein 358)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ZNF358 (zinc finger protein 358)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Znf358 (zinc finger protein 358)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	ZNF572 (zinc finger protein 572)	HGNC	Panther
Alliance orthologs ³
Homo sapiens (human):	ZNF358 (zinc finger protein 358)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Zfp358 (zinc finger protein 358)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	znf1007 (zinc finger protein 1007)	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Saccharomyces cerevisiae (baker's yeast):	ZAP1	Alliance	DIOPT (Hieranoid\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	6,350,266 - 6,354,359 (+)	NCBI		GRCr8
mRatBN7.2	12	1,552,367 - 1,556,460 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	1,552,366 - 1,556,460 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	2,216,693 - 2,220,785 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	2,840,263 - 2,844,355 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	1,612,277 - 1,616,370 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	2,046,472 - 2,050,565 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	2,046,472 - 2,050,565 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	4,209,518 - 4,213,613 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	2,658,623 - 2,662,716 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	2,658,625 - 2,662,716 (-)	NCBI
Celera	12	3,408,729 - 3,412,822 (+)	NCBI		Celera
Cytogenetic Map	12	p12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

hereditary spastic paraplegia 39 (ISO)

mucolipidosis type IV (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-palmitoylglycerol (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

acrylamide (EXP)

aflatoxin B1 (EXP)

antirheumatic drug (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium atom (ISO)

chlorpyrifos (ISO)

dexamethasone (ISO)

diethylstilbestrol (EXP)

elemental selenium (ISO)

endosulfan (EXP)

ethanol (ISO)

FR900359 (ISO)

indometacin (ISO)

mancozeb (ISO)

paracetamol (EXP)

selenium atom (ISO)

sodium arsenite (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

triptonide (ISO)

valproic acid (ISO)

vitamin E (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of transcription by RNA polymerase II (IBA)

regulation of cytokine production (IBA)

regulation of immune system process (IBA)

Cellular Component

nucleoplasm (IBA)

Molecular Function

DNA-binding transcription repressor activity, RNA polymerase II-specific (IBA)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Zfp358
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	6,350,266 - 6,354,359 (+)	NCBI		GRCr8
mRatBN7.2	12	1,552,367 - 1,556,460 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	1,552,366 - 1,556,460 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	2,216,693 - 2,220,785 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	2,840,263 - 2,844,355 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	1,612,277 - 1,616,370 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	2,046,472 - 2,050,565 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	2,046,472 - 2,050,565 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	4,209,518 - 4,213,613 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	2,658,623 - 2,662,716 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	2,658,625 - 2,662,716 (-)	NCBI
Celera	12	3,408,729 - 3,412,822 (+)	NCBI		Celera
Cytogenetic Map	12	p12	NCBI

ZNF358
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	7,513,880 - 7,521,025 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	7,515,292 - 7,521,025 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	7,580,989 - 7,585,911 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	7,487,004 - 7,491,911 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	7,487,074 - 7,491,911	NCBI
Celera	19	7,453,515 - 7,458,434 (+)	NCBI		Celera
Cytogenetic Map	19	p13.2	NCBI
HuRef	19	7,255,266 - 7,257,086 (+)	NCBI		HuRef
CHM1_1	19	7,584,011 - 7,585,831 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	7,514,603 - 7,521,761 (+)	NCBI		T2T-CHM13v2.0

Zfp358
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	3,543,138 - 3,547,208 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	3,543,138 - 3,547,208 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	3,493,138 - 3,497,208 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	3,493,138 - 3,497,208 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	3,493,138 - 3,497,208 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	3,493,171 - 3,497,208 (+)	NCBI		MGSCv36	mm8
Celera	8	3,719,112 - 3,723,182 (+)	NCBI		Celera
Cytogenetic Map	8	A1.1	NCBI
cM Map	8	1.92	NCBI

Znf358
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955563	1,714,393 - 1,716,499 (-)	NCBI	ChiLan1.0	ChiLan1.0

ZNF358
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	12,186,904 - 12,192,614 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	11,305,440 - 11,310,704 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	6,806,690 - 6,811,914 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	7,664,219 - 7,670,123 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	7,668,319 - 7,670,046 (+)	Ensembl	panpan1.1		panPan2

SAXO5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	52,297,373 - 52,304,400 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	52,101,541 - 52,108,348 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	52,826,937 - 52,833,752 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	52,810,257 - 52,845,852 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	52,030,490 - 52,037,288 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	52,474,070 - 52,480,878 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	52,705,000 - 52,711,807 (+)	NCBI		UU_Cfam_GSD_1.0

Znf358
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	213,236,010 - 213,245,945 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936588	4,597,045 - 4,598,700 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936588	4,592,060 - 4,598,775 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZNF358
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	71,615,551 - 71,619,865 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	71,615,475 - 71,619,683 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	72,153,917 - 72,158,957 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZNF358
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	7,011,795 - 7,017,516 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	7,015,733 - 7,017,439 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666081	851,029 - 856,800 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Znf358
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624828	629,530 - 632,986 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624828	629,686 - 632,799 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Zfp358
11 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	96
Count of miRNA genes:	88
Interacting mature miRNAs:	94
Transcripts:	ENSRNOT00000001289
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2312418	Kidm41	Kidney mass QTL 41	3.7	0.0001	kidney mass (VT:0002707)	single kidney wet weight to body weight ratio (CMO:0000622)	12	1	19611090	Rat
10755457	Coatc14	Coat color QTL 14		0.01759	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	12	1	22591684	Rat
634351	Apr5	Acute phase response QTL 5	6.7		blood interleukin-6 amount (VT:0008595)	plasma interleukin-6 level (CMO:0001927)	12	1	44503507	Rat
8694179	Bw150	Body weight QTL 150	2.9	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	12	1	42110980	Rat
634350	Apr4	Acute phase response QTL 4	6		orosomucoid 1 amount (VT:0010541)	plasma orosomucoid 1 level (CMO:0001467)	12	1172005	46172005	Rat
7411545	Bw128	Body weight QTL 128	5.2	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	12	1	42110980	Rat
7387292	Kidm42	Kidney mass QTL 42	3.03	0.0004	kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	12	1	36247923	Rat
737979	Pia22	Pristane induced arthritis QTL 22	53.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	12	1	44465750	Rat
9590147	Scort7	Serum corticosterone level QTL 7	13.61	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	12	1	42110980	Rat
7411586	Foco5	Food consumption QTL 5	5.4	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	1	42110980	Rat
1581516	Cm56	Cardiac mass QTL 56	4.2	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	12	1	29333307	Rat
9590086	Insglur6	Insulin/glucose ratio QTL 6	18.97	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	12	1	42110980	Rat
2303575	Insul14	Insulin level QTL 14	4		blood insulin amount (VT:0001560)	blood insulin level (CMO:0000349)	12	1	42450532	Rat
6893681	Bw109	Body weight QTL 109	2.3	0.004	body mass (VT:0001259)	body weight (CMO:0000012)	12	1	23297788	Rat
7243862	Mcs30	Mammary carcinoma susceptibility QTL 30	8.62		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	12	797729	8525593	Rat
2302042	Pia38	Pristane induced arthritis QTL 38	3.5	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G1 level (CMO:0002115)	12	1	44503507	Rat
7411595	Foco9	Food consumption QTL 9	4	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	1	42110980	Rat
1300174	Bw15	Body weight QTL 15	2.93		body mass (VT:0001259)	body weight loss (CMO:0001399)	12	1	9318387	Rat
7411660	Foco28	Food consumption QTL 28	10.9	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	1	42110980	Rat
1598855	Bp294	Blood pressure QTL 294	3.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	12	1	34851688	Rat

Markers in Region

RH133337

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	136,692,262 - 136,692,445 (+)	MAPPER	mRatBN7.2
mRatBN7.2	12	1,556,254 - 1,556,437 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	2,050,360 - 2,050,542	NCBI	Rnor6.0
Rnor_6.0	5	142,423,772 - 142,423,954	NCBI	Rnor6.0
Rnor_5.0	5	146,197,399 - 146,197,581	UniSTS	Rnor5.0
Rnor_5.0	12	4,213,406 - 4,213,588	UniSTS	Rnor5.0
RGSC_v3.4	12	2,658,646 - 2,658,828	UniSTS	RGSC3.4
Celera	12	3,412,617 - 3,412,799	UniSTS
Celera	5	135,217,076 - 135,217,258	UniSTS
Cytogenetic Map	12	p12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108328	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474084	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000001289 ⟹ ENSRNOP00000001289

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	12	1,552,366 - 1,556,460 (+)	Ensembl
Rnor_6.0 Ensembl	12	2,046,472 - 2,050,565 (+)	Ensembl

RefSeq Acc Id:

NM_001108328 ⟹ NP_001101798

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	6,350,266 - 6,354,359 (+)	NCBI
mRatBN7.2	12	1,552,367 - 1,556,460 (+)	NCBI
Rnor_6.0	12	2,046,472 - 2,050,565 (+)	NCBI
Rnor_5.0	12	4,209,518 - 4,213,613 (+)	NCBI
RGSC_v3.4	12	2,658,623 - 2,662,716 (-)	RGD
Celera	12	3,408,729 - 3,412,822 (+)	RGD

Sequence:

show sequence

ATGGCTCCGGCCGCCGAGGGCGCGGGCGAACTACAAGTCCCAGCAGCTCCCGCAGCGGCCCTCG
GCCGGCCCCTCTCGCTCCTCGGGAGCGCCTGGCGGGGCCGCTGGGCCGAGGGGGCCGCCAGCGG
GGCTGGTGAGCGGTGGGGTTTCCTGCAAGCCTGGGGCGGGGAGACGCCGGCTGGCCAGCCCGAG
TGCAGCCAGGCCGGGCAGGGGCGAGGGGCATCGGATCCCGTTCCGGAATCCGCACGCGGTTCTA
CTTCCAGGATGAGGCGCTCCGTCCTGGTTAGGAACCCGGGCCACAAGAGTCTTAGGCCCCTTTA
TGGAGACCTTCCTTCAGACCCAGAAGACCTGGACCCCAGTCCCAAAGCTCCAGATCGTATCTCT
GAAAGCCCCGAGCCAGAGCCGGAAGACCTCAACACTGTCTCAGAGGATGGGGACGCCAGCTTAG
AAGATCCCGAGCCTGAGGCAGAGGAAGCTCCACCGTCCATGTTGGGGAAGCCAGACTTGGATTC
TCGAGATCTGGATCCCACGTCTTCAAGTTTCGACCTGGATCCTGATGTGATTGGCCCGGTGCCA
CTAGTTCTCGACCCAAGCGATGACACCCTCAGCCCTGCTGCTCCACATGTGGATTCCCTTCCCT
CTAGCCTCACTGCCACCCCCGAAATCTTGGCCACCAGCTCAGCGGTGGTGCTTCCTGCCCCTGC
CAGTCCACCTCGTCCCTTCTCCTGTCCTGATTGCGGGCGAGCCTTCCGCCGCAGCTCTGGGCTG
AGCCAGCACCGACGCACGCACAGTGGAGAGAAGCCTTACCGCTGCCCTGACTGTGGCAAGTCAT
TCAGCCATGGTGCCACACTGGCCCAACATCGTGGCATCCACACTGGTGCACGGCCCTACCAGTG
TGCTGCCTGTGGCAAGGCCTTCGGCTGGCGGTCCACACTGCTCAAGCACCGCAGCAGCCACAGC
GGGGAGAAGCCACACCACTGCCCCGTGTGTGGCAAGGCCTTCGGTCACGGCTCGTTGCTGGCCC
AGCACCTGCGCACGCACGGTGGCCCTCGCCCCCACAAGTGCCCGGTGTGTGCTAAAGGCTTTGG
GCAGGGCTCTGCGCTCCTTAAACACCTGCGCACCCATACAGGCGAGCGCCCTTACCCGTGCCCG
CAGTGCGGCAAGGCCTTTGGGCAGAGCTCAGCGTTGCTCCAGCATCAGCGCACCCACACCGCTG
AGCGTCCCTATCGCTGTCCCCACTGCGGCAAGGCCTTTGGGCAGAGCTCCAACTTGCAGCACCA
CCTGCGCATCCACACTGGCGAGCGACCTTACGCCTGCCCACACTGCTCCAAGGCCTTTGGGCAG
AGTTCGGCACTCCTACAACACCTCCACGTGCATTCTGGCGAGCGCCCCTACCGTTGTCAGCTCT
GCGGCAAGGCCTTTGGCCAAGCCTCCAGCCTCACCAAACATAAGCGTGTGCATGAGGGAGCCGC
AGCTGCCGCCGCTGCCGCCGCTGCAGCCGCAGCCGGGCTGGGTCTTGGGCCTGGTTTGAGCCCA
GTATCTATGATGAGGCCAGGGCAGATCTCTTTCCTGGGTCCTGATGCTGTTTCTGTGCTGGGAT
CTGGCCTGGGCCTCAGTTCCGGTGCCAGCCCTGCCCGAAGTTCTGCCCCTACTTCTGTGCTGGG
TTCACTCCAAAACCCCCTCCTTCAGACCCACTCAGGATCTGTCTCCAGCCCTGACCTTGTTCTG
TCTTCTGACCCTAAGCCAGGCCTTGATGCTGATCCCGATGTGGTACCCAGTCCTGACCAAGAGT
TGGATCCCAACCCTAACCCCGATCTTGTCCCCAATCCTGACTCCAGACCCAAGTCCCAAACTGA
CCCCTATTCTCCCACTCACGACAGTCCCAGCCCAGCCCTTCCAGCTGGAGAAAGTCCCAAGTGG
GTAAAGGAGGAAGGGGCCCTGCTGGGGCCTGATGGGTAAAGGGGGCGCTGCGTCTGTGGTGATC
TGGGGAAGGTGTGTGCTATGTTCACAGTAAAATCCTCCTGCCTCCTG

hide sequence

Protein Sequences


Protein RefSeqs	NP_001101798	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL74930	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000001289.4

RefSeq Acc Id:

NP_001101798 ⟸ NM_001108328

- UniProtKB:

D3ZRG3 (UniProtKB/TrEMBL), A6KQ05 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAPAAEGAGELQVPAAPAAALGRPLSLLGSAWRGRWAEGAASGAGERWGFLQAWGGETPAGQPE
CSQAGQGRGASDPVPESARGSTSRMRRSVLVRNPGHKSLRPLYGDLPSDPEDLDPSPKAPDRIS
ESPEPEPEDLNTVSEDGDASLEDPEPEAEEAPPSMLGKPDLDSRDLDPTSSSFDLDPDVIGPVP
LVLDPSDDTLSPAAPHVDSLPSSLTATPEILATSSAVVLPAPASPPRPFSCPDCGRAFRRSSGL
SQHRRTHSGEKPYRCPDCGKSFSHGATLAQHRGIHTGARPYQCAACGKAFGWRSTLLKHRSSHS
GEKPHHCPVCGKAFGHGSLLAQHLRTHGGPRPHKCPVCAKGFGQGSALLKHLRTHTGERPYPCP
QCGKAFGQSSALLQHQRTHTAERPYRCPHCGKAFGQSSNLQHHLRIHTGERPYACPHCSKAFGQ
SSALLQHLHVHSGERPYRCQLCGKAFGQASSLTKHKRVHEGAAAAAAAAAAAAAGLGLGPGLSP
VSMMRPGQISFLGPDAVSVLGSGLGLSSGASPARSSAPTSVLGSLQNPLLQTHSGSVSSPDLVL
SSDPKPGLDADPDVVPSPDQELDPNPNPDLVPNPDSRPKSQTDPYSPTHDSPSPALPAGESPKW
VKEEGALLGPDG

hide sequence

Ensembl Acc Id:

ENSRNOP00000001289 ⟸ ENSRNOT00000001289

Protein Domains

C2H2-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZRG3-F1-model_v2	AlphaFold	D3ZRG3	1-652	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13698367

Promoter ID:

EPDNEW_R8892

Type:

initiation region

Name:

Zfp358_1

Description:

zinc finger protein 358

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	12	2,046,559 - 2,046,619	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310416	AgrOrtholog
BioCyc Gene	G2FUF-20399	BioCyc
Ensembl Genes	ENSRNOG00000000974	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000001289.6	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	Znf_C2H2/integrase_DNA-bd	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
KEGG Report	rno:360754	UniProtKB/TrEMBL
NCBI Gene	360754	ENTREZGENE
PANTHER	GENE 12845-RELATED	UniProtKB/TrEMBL
	TRANSCRIPTIONAL REPRESSOR PROTEIN YY	UniProtKB/TrEMBL
Pfam	zf-C2H2	UniProtKB/TrEMBL
PhenoGen	Zfp358	PhenoGen
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000000974	RatGTEx
SMART	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57667	UniProtKB/TrEMBL
UniProt	A6KQ05	ENTREZGENE, UniProtKB/TrEMBL
	D3ZRG3	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Zfp358	zinc finger protein 358	Zfp358_predicted	zinc finger protein 358 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Zfp358_predicted	zinc finger protein 358 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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