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Gene: Fktn (fukutin) Rattus norvegicus

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Symbol:

Fktn

Name:

fukutin

RGD ID:

1310087

Description:

Predicted to enable phosphotransferase activity, for other substituted phosphate groups. Predicted to be involved in several processes, including negative regulation of JNK cascade; protein O-linked glycosylation via mannose; and protein glycosylation. Predicted to act upstream of or within basement membrane organization; brain development; and skeletal muscle fiber differentiation. Predicted to be located in cis-Golgi network; endoplasmic reticulum; and nucleus. Predicted to be active in Golgi membrane. Human ortholog(s) of this gene implicated in dilated cardiomyopathy (multiple) and muscular dystrophy (multiple). Orthologous to human FKTN (fukutin); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Fcmd; Fukuyama type congenital muscular dystrophy (fukutin); Fukuyama type congenital muscular dystrophy homolog; Fukuyama type congenital muscular dystrophy homolog (human); LOC362520; ribitol-5-phosphate transferase FKTN

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	FKTN (fukutin)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Fktn (fukutin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Fktn (fukutin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	FKTN (fukutin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	FKTN (fukutin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Fktn (fukutin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	FKTN (fukutin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	FKTN (fukutin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Fktn (fukutin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Fktn (fukutin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	MTHFD1L (methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	FKTN (fukutin)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Fktn (fukutin)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	fktn (fukutin)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	T07A5.1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	T07D3.4	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	W02B3.4	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	Y22D7AL.11	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	MNN14	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Saccharomyces cerevisiae (baker's yeast):	MNN4	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Caenorhabditis elegans (roundworm):	W02B3.7	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	fktn	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	fktn	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	73,134,746 - 73,191,772 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	73,135,361 - 73,189,181 (+)	Ensembl				GRCr8
mRatBN7.2	5	68,339,803 - 68,396,412 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	68,340,028 - 68,396,409 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	70,227,762 - 70,281,805 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	72,044,733 - 72,098,826 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	72,016,575 - 72,070,620 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	70,522,001 - 70,578,270 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	70,528,688 - 70,578,273 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	74,697,518 - 74,754,106 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	71,155,051 - 71,208,525 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	67,234,078 - 67,287,987 (+)	NCBI		Celera
RGSC_v3.1	5	71,168,040 - 71,211,945 (+)	NCBI
Cytogenetic Map	5	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal recessive limb-girdle muscular dystrophy type 2L (ISO)

autosomal recessive limb-girdle muscular dystrophy type 2M (ISO)

cardiomyopathy (ISO)

Congenital Muscular Dystrophy with Central Nervous System Involvement (ISO)

congenital muscular dystrophy-dystroglycanopathy type A1 (ISO)

Developmental Disabilities (ISO)

dilated cardiomyopathy (ISO)

dilated cardiomyopathy 1B (ISO)

dilated cardiomyopathy 1X (ISO)

Fukuyama congenital muscular dystrophy (ISO,ISS)

hypertrophic cardiomyopathy (ISO)

muscular dystrophy (ISO)

muscular dystrophy-dystroglycanopathy (ISO)

muscular dystrophy-dystroglycanopathy type B1 (ISS)

muscular dystrophy-dystroglycanopathy type B4 (ISO)

Ventricular Tachycardia (ISO)

Walker-Warburg syndrome (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dichloroethane (ISO)

17beta-estradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

2-methylcholine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

acrolein (ISO)

acrylamide (EXP,ISO)

aflatoxin B1 (ISO)

aflatoxin M1 (ISO)

alpha-pinene (ISO)

amitrole (EXP)

amphetamine (EXP)

aristolochic acid A (ISO)

Aroclor 1254 (ISO)

arsenite(3-) (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butanal (ISO)

cadmium dichloride (ISO)

CGP 52608 (ISO)

chloropicrin (ISO)

chlorpyrifos (EXP)

cyclosporin A (ISO)

DDT (EXP)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

doxorubicin (ISO)

epoxiconazole (ISO)

fenthion (ISO)

folic acid (ISO)

formaldehyde (ISO)

hydrogen peroxide (ISO)

hypochlorous acid (ISO)

inulin (ISO)

lipopolysaccharide (ISO)

methimazole (EXP)

methylmercury chloride (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

pentachlorophenol (ISO)

pentanal (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenate (ISO)

sulfadimethoxine (EXP)

sunitinib (ISO)

tetrachloromethane (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

triphenyl phosphate (EXP,ISO)

troglitazone (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

basement membrane organization (ISO)

biological_process (ND)

brain development (ISO)

cerebellar cortex development (ISO)

cerebral cortex development (ISO)

glycoprotein biosynthetic process (ISO)

negative regulation of cell population proliferation (ISO)

negative regulation of JNK cascade (ISO)

protein deglycosylation (ISO)

protein O-linked glycosylation (ISO)

protein O-linked glycosylation via mannose (ISO)

skeletal muscle fiber differentiation (ISO)

Cellular Component

cis-Golgi network (ISO)

endoplasmic reticulum (ISO)

Golgi apparatus (ISO)

Golgi membrane (IBA,ISO)

membrane (IEA)

nucleus (ISO)

Molecular Function

phosphotransferase activity, for other substituted phosphate groups (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Founder Fukutin mutation causes Walker-Warburg syndrome in four Ashkenazi Jewish families.	Chang W, etal., Prenat Diagn. 2009 Jun;29(6):560-9. doi: 10.1002/pd.2238.
2.	Development of rabbit monoclonal antibodies for detection of alpha-dystroglycan in normal and dystrophic tissue.	Fortunato MJ, etal., PLoS One. 2014 May 13;9(5):e97567. doi: 10.1371/journal.pone.0097567. eCollection 2014.
3.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
5.	Fukutin gene mutations in steroid-responsive limb girdle muscular dystrophy.	Godfrey C, etal., Ann Neurol. 2006 Nov;60(5):603-10.
6.	Selective deficiency of alpha-dystroglycan in Fukuyama-type congenital muscular dystrophy.	Hayashi YK, etal., Neurology. 2001 Jul 10;57(1):115-21.
7.	An ancient retrotransposal insertion causes Fukuyama-type congenital muscular dystrophy.	Kobayashi K, etal., Nature. 1998 Jul 23;394(6691):388-92.
8.	Novel mutations and genotype-phenotype relationships in 107 families with Fukuyama-type congenital muscular dystrophy (FCMD).	Kondo-Iida E, etal., Hum Mol Genet. 1999 Nov;8(12):2303-9.
9.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
10.	Fukutin gene mutations cause dilated cardiomyopathy with minimal muscle weakness.	Murakami T, etal., Ann Neurol. 2006 Nov;60(5):597-602.
11.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
12.	Further evidence of Fukutin mutations as a cause of childhood onset limb-girdle muscular dystrophy without mental retardation.	Puckett RL, etal., Neuromuscul Disord. 2009 May;19(5):352-6. doi: 10.1016/j.nmd.2009.03.001. Epub 2009 Apr 1.
13.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
14.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
15.	Comprehensive gene review and curation	RGD comprehensive gene curation
16.	Fukutin protein is expressed in neurons of the normal developing human brain but is reduced in Fukuyama-type congenital muscular dystrophy brain.	Saito Y, etal., Ann Neurol. 2000 Jun;47(6):756-64.
17.	Four Caucasian patients with mutations in the fukutin gene and variable clinical phenotype.	Vuillaumier-Barrot S, etal., Neuromuscul Disord. 2009 Mar;19(3):182-8. doi: 10.1016/j.nmd.2008.12.005.
18.	Fukutin mutations in non-Japanese patients with congenital muscular dystrophy: less severe mutations predominate in patients with a non-Walker-Warburg phenotype.	Yis U, etal., Neuromuscul Disord. 2011 Jan;21(1):20-30. doi: 10.1016/j.nmd.2010.08.007. Epub 2010 Oct 18.

Additional References at PubMed

PMID:12471058	PMID:15213246	PMID:17034757	PMID:18808525	PMID:25279699

Genomics

Comparative Map Data

Fktn
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	73,134,746 - 73,191,772 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	73,135,361 - 73,189,181 (+)	Ensembl				GRCr8
mRatBN7.2	5	68,339,803 - 68,396,412 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	68,340,028 - 68,396,409 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	70,227,762 - 70,281,805 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	72,044,733 - 72,098,826 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	72,016,575 - 72,070,620 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	70,522,001 - 70,578,270 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	70,528,688 - 70,578,273 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	74,697,518 - 74,754,106 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	71,155,051 - 71,208,525 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	67,234,078 - 67,287,987 (+)	NCBI		Celera
RGSC_v3.1	5	71,168,040 - 71,211,945 (+)	NCBI
Cytogenetic Map	5	q24	NCBI

FKTN
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	105,558,130 - 105,641,118 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	105,558,122 - 105,653,820 (+)	Ensembl			hg38	GRCh38
GRCh37	9	108,320,411 - 108,403,399 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	107,360,232 - 107,443,220 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	9	105,399,978 - 105,482,953	NCBI
Celera	9	78,825,571 - 78,908,566 (+)	NCBI		Celera
Cytogenetic Map	9	q31.2	NCBI
HuRef	9	77,921,830 - 78,004,880 (+)	NCBI		HuRef
CHM1_1	9	108,467,406 - 108,550,392 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	117,732,799 - 117,815,798 (+)	NCBI		T2T-CHM13v2.0

Fktn
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	53,713,745 - 53,765,785 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	53,713,998 - 53,777,890 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	4	53,714,107 - 53,765,785 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	53,713,998 - 53,777,890 (+)	Ensembl			mm10	GRCm38
MGSCv37	4	53,727,054 - 53,776,143 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	4	53,735,282 - 53,784,371 (+)	NCBI		MGSCv36	mm8
Celera	4	53,671,147 - 53,720,238 (+)	NCBI		Celera
Cytogenetic Map	4	B2	NCBI
cM Map	4	28.74	NCBI

Fktn
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955419	20,933,662 - 20,994,793 (-)	Ensembl
ChiLan1.0	NW_004955419	20,933,662 - 20,994,793 (-)	NCBI	ChiLan1.0	ChiLan1.0

FKTN
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	33,736,875 - 33,835,805 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	33,739,744 - 33,839,021 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	76,723,071 - 76,821,611 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	104,849,447 - 104,926,414 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	104,849,496 - 104,925,422 (+)	Ensembl			panPan2	panpan1.1

FKTN
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	61,394,002 - 61,462,056 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	61,405,034 - 61,461,396 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	59,854,900 - 59,922,736 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	62,541,606 - 62,598,262 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	62,530,493 - 62,597,602 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	61,048,756 - 61,131,662 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	61,079,051 - 61,135,687 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	61,760,632 - 61,835,969 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Fktn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	176,585,787 - 176,685,702 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936559	6,581,622 - 6,581,948 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0 Ensembl	NW_004936559	6,619,531 - 6,670,727 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936559	6,612,318 - 6,680,690 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FKTN
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	246,853,166 - 246,916,644 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	246,852,387 - 246,916,650 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	276,542,569 - 276,576,326 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FKTN
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	33,872,165 - 33,964,105 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	33,900,362 - 33,953,377 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666035	8,677,300 - 8,770,035 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fktn
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624758	5,792,514 - 5,877,709 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624758	5,750,804 - 5,877,797 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Fktn
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	97,478,841 - 97,530,576 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Fktn
292 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	176
Count of miRNA genes:	119
Interacting mature miRNAs:	152
Transcripts:	ENSRNOT00000036799
Prediction methods:	Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578776	Stresp18	Stress response QTL 18	2.9		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	5	32751649	77751649	Rat
1298067	Scl15	Serum cholesterol level QTL 15	4.8	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	38011670	83011670	Rat
1300115	Hrtrt7	Heart rate QTL 7	2.76		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	5	52665372	94894052	Rat
6907115	Mcs29	Mammary carcinoma susceptibility QTL 29			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	38004331	83004331	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	44924861	153890773	Rat
1358353	Srcrtb2	Stress Responsive Cort Basal QTL 2	3.48	0.003	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	23671493	79046465	Rat
70212	Niddm25	Non-insulin dependent diabetes mellitus QTL 25	3.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	38207390	136631402	Rat
61386	Bp49	Blood pressure QTL 49	16.6		cerebrum integrity trait (VT:0010549)	brain infarction volume (CMO:0001013)	5	65089051	103648916	Rat
1331801	Rf33	Renal function QTL 33	4.149		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	48523123	134369373	Rat
1598807	Glom12	Glomerulus QTL 12	2.7		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	5	38011670	83011670	Rat
1302786	Kidm8	Kidney mass QTL 8	28.15		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	5	38011670	83011670	Rat
61393	Bp7	Blood pressure QTL 7	4.5	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	65089051	166764498	Rat
1331782	Rf36	Renal function QTL 36	3.296		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	39019942	102105896	Rat
6903292	Stl28	Serum triglyceride level QTL 28	2.6	0.0073	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	5	33311673	78311673	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	51657967	166600247	Rat
1578767	Stresp17	Stress response QTL 17	4.3	0.01	blood aldosterone amount (VT:0005346)	plasma aldosterone level (CMO:0000551)	5	32751649	77751649	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	55124766	172190305	Rat
1641912	Alcrsp18	Alcohol response QTL 18			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	39985948	84985948	Rat
1576314	Eutr1	Estrogen induced uterine response QTL 1			uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	6922282	81330203	Rat
6903306	Scl35	Serum cholesterol QTL 35	2.6	0.0073	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	33311673	78311673	Rat
7394708	Emca11	Estrogen-induced mammary cancer QTL 11			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	73176602	118176602	Rat
1576317	Eutr2	Estrogen induced uterine response QTL 2		0.01	uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	39526924	84526924	Rat
1331773	Scl26	Serum cholesterol level QTL 26	3.065		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	48523123	91770353	Rat
1578673	Bmd13	Bone mineral density QTL 13	4.9		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	5	69474415	114474415	Rat
70189	Mcs5	Mammary carcinoma susceptibility QTL 5	10.51		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	60601597	137492949	Rat
1331771	Rf35	Renal function QTL 35	4.36965		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	91770353	Rat
61359	Eaex	Experimental allergic encephalomyelitis QTL x	3		nervous system integrity trait (VT:0010566)	post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)	5	60511627	105511627	Rat
8662454	Vetf3	Vascular elastic tissue fragility QTL 3	27.4		artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	5	7065535	74335773	Rat
2290448	Scl54	Serum cholesterol level QTL 54	2.93		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	36460764	136631402	Rat
61426	Scl2	Serum cholesterol level QTL 2	7.3	0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	64589016	109589016	Rat
2290005	Mcs24	Mammary carcinoma susceptibility QTL 24			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	69835120	114835120	Rat
1331756	Rf34	Renal function QTL 34	4.16275		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	87027358	Rat
2306971	Anxrr21	Anxiety related response QTL 21	9.47		fear/anxiety-related behavior trait (VT:1000241)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	5	70969494	136328156	Rat
2316954	Rf57	Renal function QTL 57	0		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	5	64589016	93503770	Rat
2316959	Gluco59	Glucose level QTL 59	4.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	56546393	101546393	Rat
2316957	Pur21	Proteinuria QTL 21	6.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	5	64589016	91762830	Rat

Markers in Region

RH135333

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	68,339,107 - 68,339,304 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	70,521,306 - 70,521,502	NCBI	Rnor6.0
Rnor_5.0	5	74,697,162 - 74,697,358	UniSTS	Rnor5.0
RGSC_v3.4	5	71,154,357 - 71,154,553	UniSTS	RGSC3.4
Celera	5	67,233,384 - 67,233,580	UniSTS
RH 3.4 Map	5	466.8	UniSTS
Cytogenetic Map	5	q24	UniSTS

RH140020

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	68,393,312 - 68,393,493 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	70,575,169 - 70,575,349	NCBI	Rnor6.0
Rnor_5.0	5	74,751,005 - 74,751,185	UniSTS	Rnor5.0
RGSC_v3.4	5	71,208,015 - 71,208,195	UniSTS	RGSC3.4
Celera	5	67,287,477 - 67,287,657	UniSTS
RH 3.4 Map	5	467.4	UniSTS
Cytogenetic Map	5	q24	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108667	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238166	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238168	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763712	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763713	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763714	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763715	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110244	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110247	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110248	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287921	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287925	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287926	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287927	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287928	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287929	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005504477	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005504478	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC118841	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474039	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ225476	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ228029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ228107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ230457	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000036799 ⟹ ENSRNOP00000032995

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	73,135,361 - 73,188,893 (+)	Ensembl
mRatBN7.2 Ensembl	5	68,340,028 - 68,396,409 (+)	Ensembl
Rnor_6.0 Ensembl	5	70,528,688 - 70,578,273 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000127827 ⟹ ENSRNOP00000108834

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	73,135,558 - 73,189,181 (+)	Ensembl

RefSeq Acc Id:

NM_001108667 ⟹ NP_001102137

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	73,135,162 - 73,189,181 (+)	NCBI
mRatBN7.2	5	68,339,803 - 68,393,823 (+)	NCBI
Rnor_6.0	5	70,522,001 - 70,575,679 (+)	NCBI
Rnor_5.0	5	74,697,518 - 74,754,106 (+)	NCBI
RGSC_v3.4	5	71,155,051 - 71,208,525 (+)	RGD
Celera	5	67,234,078 - 67,287,987 (+)	RGD

Sequence:

show sequence

GTTTTTCCTAAACCTCAGGCAGCCTCAGGACGCTGCTGGAGGGATGGCTGACTGCAGATTTCTA
AAGGCCAGACAAATAGAAGGGCTCCGAGAACTTGGCAGCAGACGTTGGCAAACCTGTACGGCCA
AAGGCTACTCGGGCTAGCGAACGCAGCTGTGCGCTTGACGGTTTCTTTGCGACAGTCGTCGTGA
CTGCCGTAAAGCGAGGCTTCCGCCGCAGCTCTAGAGTTAGAAGTACCTCTGTTGACAGGAAACA
AGATTCTGTTTCATAAAGAAGATGAAAACAACTGGGTTCCTGTTAACAAACACCCAAGAGACCA
GCATAGACCAATGAGCAGAGTCAATAAGAACGTGGTCTTGGCCCTTCTAACACTGATGAGCTGT
GCCTTCCTGCTGTTTCAGCTGTACTACTACAAGCACTACTTGTCAGCACGGAATGGAACGGGTT
CATCAAAATCCAAAGGAAATCGAGTTGGATTTGATAGCACACAATGGCGTGCAGTTAAGAAATT
TATTATGCTGACATCCAGCCAAAATGTGCCGGTGTTCCTTATTGACCCTTGGATTCTGGAATCA
ATTAATAAAAATTTCGAACAAGTGAAAAATGCCTCTCAAGGCTCGGCCTCAGAATGCAGATTTT
TCTGTGTTCCGAGAGACTTCACTGCGTTCGCGCTGCAGTATCACCTGTGGAAGAATGAGGATGG
ATGGTTTCAGATGGCTGAGAACATGGGATTCCAGTGCCTGAAGATTGAAAGCAAAGATCCTCGG
CTGGATGGAATAGACTCGCTTTCCGGAACTGAGATCCCTCTGCACTATGTCTGTAAGCTGGCCA
CTCACGCCATCCACTTGGTCGTCTTTCACGAGAGGAGTGGCAACTACCTCTGGCATGGTCACCT
ACGACTCAAAGGGCACATGGATAGGAAGTTTGTTCCTTTTCGAAGGCTACAATTTGGTCGTTAT
CCTGGAGCCTTTGACAGGCCGGAGTTACAGCAGGTTACTGTTGATGGACTCGACATGCTTATTC
CAAAAGACCCAGGGCGCTTTCTAGAAGAAGTACCTCACTCCAGATTTATCGAGTGCAGGTATAA
AGAAGCCCGGGCATTCCTTCAGCAGTACGTCGATGACAACACTGTGGATGCCATGGCCTTTCGG
AAGAGGGCAAAGGAGTTACTGCAACTAGCGGCCAAGACGCTGAAGGCGCTGGGAGTGCCCTTCT
GGCTGAGCAGTGGGACGTGTCTAGGATGGTATCGGCAATGCAGTATCATTCCTTATAGCAAAGA
TGTCGACCTAGGAATTTTCATTCAAGATTACAAACCTGATATTGTTTTGGCATTTCAGGATGCA
GGACTTCCACTCAAACACAAGTTTGGGAAGGTGGAGGACAGCTTGGAACTCTCCTTCCAGGGAC
AAGCTGATGTAAAACTTGATATTTTTTTCTTCTATGAAGAGACTGACCATATGTGGAATGGAGG
CACGCAGGCCAGAACAGGAAAGAAGTTTAAGTATCTGTTCCCCAAGTTTACACTGTGCTGGACG
GAGTTTGTAGACATAAAAGTCCATGTTCCCTGTGAAACAGTTGACTACATTGAAGCCAACTATG
GCAAGGCCTGGAAGATCCCTGTCAAGACCTGGGACTGGAAGAGCTCACCCCCGAATGTGCAGCC
CAATGGGGTCTGGCCTATTTCGGAGTGGGATGAAGTTATCCAGTTGTACTGAGAACACTGAGCT
CATGTGGGACGTTTCCCAGAAAGAAGGTAGGCAGCTGTTGAAAGCACTATGTTTTCTGCCTGAT
GTGAGAGCCAAAGAGGAGAAATGACGAGTTGGAAGACAGAAAAGGTTTTCTGACTCATGGGCCA
TCTAATCAGTTCTGCCACTCAGCATTTACTGAGGAGTTTATACACCAGGTGAAGTACTAGGATC
TGGTGAACAGGCAGAGAGGAATGAGAGGCCAGCTTCTCTCTTGCCCTGTTGGTAAGCACTACAA
TTTTATGTTAAGGGAAACTAACCCACTCTCTGAAGAGGTGTACAGTAGAATGTATTCCATAATG
ATTTTTAAAATGTTAATTAATGTTTAAACCGGAAAGTGAGCTCATCAGACAAAGCTAACAAAGG
ATGTGTTAGTTGAGAGTAGTTCATTTCTGCCTGCCCTCGGGATTTAAGCTGCTGTGTTAGTGTT
AAGGTTGTGGGATATGAGTTAATATTCCAGTGAGTGATTAGACTTTGTCTCACAGAGAAAAGAC
AGTGGCCAACTCATTTTACAAGCAGTGTGATACACAGTTGACTTCAAGCACTGGGCATTCTATA
AGGGAGGATGAGAGCCGATAGCAGCTCTTGTCAAGACGTACACTGTTTTCATCTTTGAGATGAA
CATGGATGCTTAGATGGTGCTTGAATCCCTGACATCATAAGGATATTTTCACTGACCTGCAGTA
GTACTTCCTGATAAATCATTCAGTCGTGCTATCCAAAAGTTGTGACATCTCAAAGCTTCCGTTC
CTTATTTCATTCTTAGTCACTCTTAAACTCAAAAATGGAAGTTACTCATGAATATTTTTATATT
TTATGAATGTATAACTTTTCTGCCTTTAATTTTAATATTGACACTAAGTAATAATAGACATACC
TCTTAATTTTTTAAAAATACCCTTTATTTATTTATCAACCATAGTTCCATGTGTTTAATTTATG
GCCTACACACTAATTTATTTAGCACAAGATATGCCTGTTCTTCTATCCAATATTACTTCACGGT
TCCAAAATGAAGGGTTAACGTGAACCTGGCCATTACTCCTTTTCCCAGATTACTGTCTTTAAAG
CCTGTGTCCATCTCTAGATTTTCATTCTGCTGAGTGTAATAGGGCAAGGGCTTCCTACCCACAA
GTACTGCACAAGTGGGACCCTTGACCTACACTCCTGAGTCCATTGTAGTGGCTGCACATAAGCC
ATGCAGTCTCAGAGAGAGATGACACAGTGAGTGCCTGCCTGCCTTGCCTGGGAGGGGAGGGTCC
ACTCCCTGCTGCTTAGGGATGTGCTTCATGGCAACCTGGCAGATTTCCCTTGGCACGTGTAGTT
ACTACAGCAGAAACCAGGATAGATGAGAGAATGGGCTGGCAGAAAGAAAAGAAAAAAGAAAGAA
AAAGAAAAACTTGGAGGAAGTAACTTGAAGCCACCTATTTCCAAATTTAAACTTCAACATGAAA
ACTGTCTTTGTTGGATGATATGCAGCAGTCTCCATGCAGCCTCCAAGTAGGAATATTGTCTCTC
CATAAGCATCATCTAATCAGAGTGTTACAGTTATTAGCACACATGTACCCAAATGACAAATCAT
AATCAGCTCTTTCCTAGAAAATAAGTCCATAGAATACGTACCCAAGTTGTAGATACCCAACCCT
ACATATTTTT

hide sequence

RefSeq Acc Id:

XM_006238166 ⟹ XP_006238228

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	73,134,746 - 73,191,772 (+)	NCBI
mRatBN7.2	5	68,339,899 - 68,396,412 (+)	NCBI
Rnor_6.0	5	70,522,177 - 70,578,270 (+)	NCBI
Rnor_5.0	5	74,697,518 - 74,754,106 (+)	NCBI

Sequence:

show sequence

GCGACAGTCGTCGTGACTGCCGTAAAGCGAGGCTTCCGCCGCAGCTCTAGAGTTAGATTCAGAT
TGTGTGTGTGGATTGTTTCAAAGCTCCGCACAAAGACTTAGGACTTTAATTAAAATGGCAGAGT
GAAAATACTTGTACTTTATTCAATCTGAAGTTACCCTGAAAAAAACATGAAAAATGGAAGATGG
ATCTTAACACAGCTTCCCCAACGCAAATATTGCTGTGACCCCAAACTGAAATGTTTGAGAGGTG
GTTGCCACAGCTGCAGAGGTGAGTGGGCAAAGAGTATGGCAATAGAGTCACCGTGGGACACTGG
AGTAAAAGCGAAATAACAGAAGTACCTCTGTTGACAGGAAACAAGATTCTGTTTCATAAAGAAG
ATGAAAACAACTGGGTTCCTGTTAACAAACACCCAAGAGACCAGCATAGACCAATGAGCAGAGT
CAATAAGAACGTGGTCTTGGCCCTTCTAACACTGATGAGCTGTGCCTTCCTGCTGTTTCAGCTG
TACTACTACAAGCACTACTTGTCAGCACGGAATGGAACGGGTTCATCAAAATCCAAAGGAAATC
GAGTTGGATTTGATAGCACACAATGGCGTGCAGTTAAGAAATTTATTATGCTGACATCCAGCCA
AAATGTGCCGGTGTTCCTTATTGACCCTTGGATTCTGGAATCAATTAATAAAAATTTCGAACAA
GTGAAAAATGCCTCTCAAGGCTCGGCCTCAGAATGCAGATTTTTCTGTGTTCCGAGAGACTTCA
CTGCGTTCGCGCTGCAGTATCACCTGTGGAAGAATGAGGATGGATGGTTTCAGATGGCTGAGAA
CATGGGATTCCAGTGCCTGAAGATTGAAAGCAAAGATCCTCGGCTGGATGGAATAGACTCGCTT
TCCGGAACTGAGATCCCTCTGCACTATGTCTGTAAGCTGGCCACTCACGCCATCCACTTGGTCG
TCTTTCACGAGAGGAGTGGCAACTACCTCTGGCATGGTCACCTACGACTCAAAGGGCACATGGA
TAGGAAGTTTGTTCCTTTTCGAAGGCTACAATTTGGTCGTTATCCTGGAGCCTTTGACAGGCCG
GAGTTACAGCAGGTTACTGTTGATGGACTCGACATGCTTATTCCAAAAGACCCAGGGCGCTTTC
TAGAAGAAGTACCTCACTCCAGATTTATCGAGTGCAGGTATAAAGAAGCCCGGGCATTCCTTCA
GCAGTACGTCGATGACAACACTGTGGATGCCATGGCCTTTCGGAAGAGGGCAAAGGAGTTACTG
CAACTAGCGGCCAAGACGCTGAAGGCGCTGGGAGTGCCCTTCTGGCTGAGCAGTGGGACGTGTC
TAGGATGGTATCGGCAATGCAGTATCATTCCTTATAGCAAAGATGTCGACCTAGGAATTTTCAT
TCAAGATTACAAACCTGATATTGTTTTGGCATTTCAGGATGCAGGACTTCCACTCAAACACAAG
TTTGGGAAGGTGGAGGACAGCTTGGAACTCTCCTTCCAGGGACAAGCTGATGTAAAACTTGATA
TTTTTTTCTTCTATGAAGAGACTGACCATATGTGGAATGGAGGCACGCAGGCCAGAACAGGAAA
GAAGTTTAAGTATCTGTTCCCCAAGTTTACACTGTGCTGGACGGAGTTTGTAGACATAAAAGTC
CATGTTCCCTGTGAAACAGTTGACTACATTGAAGCCAACTATGGCAAGGCCTGGAAGATCCCTG
TCAAGACCTGGGACTGGAAGAGCTCACCCCCGAATGTGCAGCCCAATGGGGTCTGGCCTATTTC
GGAGTGGGATGAAGTTATCCAGTTGTACTGAGAACACTGAGCTCATGTGGGACGTTTCCCAGAA
AGAAGGTAGGCAGCTGTTGAAAGCACTATGTTTTCTGCCTGATGTGAGAGCCAAAGAGGAGAAA
TGACGAGTTGGAAGACAGAAAAGGTTTTCTGACTCATGGGCCATCTAATCAGTTCTGCCACTCA
GCATTTACTGAGGAGTTTATACACCAGGTGAAGTACTAGGATCTGGTGAACAGGCAGAGAGGAA
TGAGAGGCCAGCTTCTCTCTTGCCCTGTTGGTAAGCACTACAATTTTATGTTAAGGGAAACTAA
CCCACTCTCTGAAGAGGTGTACAGTAGAATGTATTCCATAATGATTTTTAAAATGTTAATTAAT
GTTTAAACCGGAAAGTGAGCTCATCAGACAAAGCTAACAAAGGATGTGTTAGTTGAGAGTAGTT
CATTTCTGCCTGCCCTCGGGATTTAAGCTGCTGTGTTAGTGTTAAGGTTGTGGGATATGAGTTA
ATATTCCAGTGAGTGATTAGACTTTGTCTCACAGAGAAAAGACAGTGGCCAACTCATTTTACAA
GCAGTGTGATACACAGTTGACTTCAAGCACTGGGCATTCTATAAGGGAGGATGAGAGCCGATAG
CAGCTCTTGTCAAGACGTACACTGTTTTCATCTTTGAGATGAACATGGATGCTTAGATGGTGCT
TGAATCCCTGACATCATAAGGATATTTTCACTGACCTGCAGTAGTACTTCCTGATAAATCATTC
AGTCGTGCTATCCAAAAGTTGTGACATCTCAAAGCTTCCGTTCCTTATTTCATTCTTAGTCACT
CTTAAACTCAAAAATGGAAGTTACTCATGAATATTTTTATATTTTATGAATGTATAACTTTTCT
GCCTTTAATTTTAATATTGACACTAAGTAATAATAGACATACCTCTTAATTTTTTAAAAATACC
CTTTATTTATTTATCAACCATAGTTCCATGTGTTTAATTTATGGCCTACACACTAATTTATTTA
GCACAAGATATGCCTGTTCTTCTATCCAATATTACTTCACGGTTCCAAAATGAAGGGTTAACGT
GAACCTGGCCATTACTCCTTTTCCCAGATTACTGTCTTTAAAGCCTGTGTCCATCTCTAGATTT
TCATTCTGCTGAGTGTAATAGGGCAAGGGCTTCCTACCCACAAGTACTGCACAAGTGGGACCCT
TGACCTACACTCCTGAGTCCATTGTAGTGGCTGCACATAAGCCATGCAGTCTCAGAGAGAGATG
ACACAGTGAGTGCCTGCCTGCCTTGCCTGGGAGGGGAGGGTCCACTCCCTGCTGCTTAGGGATG
TGCTTCATGGCAACCTGGCAGATTTCCCTTGGCACGTGTAGTTACTACAGCAGAAACCAGGATA
GATGAGAGAATGGGCTGGCAGAAAGAAAAGAAAAAAGAAAGAAAAAGAAAAACTTGGAGGAAGT
AACTTGAAGCCACCTATTTCCAAATTTAAACTTCAACATGAAAACTGTCTTTGTTGGATGATAT
GCAGCAGTCTCCATGCAGCCTCCAAGTAGGAATATTGTCTCTCCATAAGCATCATCTAATCAGA
GTGTTACAGTTATTAGCACACATGTACCCAAATGACAAATCATAATCAGCTCTTTCCTAGAAAA
TAAGTCCATAGAATACGTACCCAAGTTGTAGATACCCAACCCTACATATTTTTCTGTGTGCGCA
TGCGTGTGCACGCACACACCCCCACTCGCACACACCAGATAATAGTGTTTTTGAGGACAAACCC
ACCCTACCTGGAGAGGATCATTTACTTGTACTCAATATCAAGAAGTATGTTTATATCGTGTTCC
TTGAGAGCTCCCACCTTCTGCCAGGAGATCTTACCCACCCCTGTTTAAGTTTCTTCTCTCATAC
CTGTCGTTGGAGTGCAAGGTCTGCCAGTGTCCATAATACAAGCTCTTGGTCCTGGGCACAGAGG
TTCTGTAGTCTTCCCTTCATAGAGGATGGGTACCTGTTTTCCCTCTGGTTTGGCTTTAGGTTTT
AGGTTCCGCCCACCGTGGAGAAATTTTCCCAGAATTTGCAGGTGAGGTTTACCTCTAAAAATGA
CTCCATGATTCAGTCATACTGAAGTCAGTGCTTCTTAACTCTTGAACTCTGCTGAGTGTCCCGA
GATCTTGGGTCAGGTCTGCCCACCACCTGAACCTTTTCAGATCACTTCTCTTCCCTCCCTGAAT
ATGCTAACTGTTATTCTCCTAATATGAGTGCTTTCTGGTCCCATTTGCCTGGACTGCTTGAAGA
TACCTTTACATTAACTCATTGGTAGTTCTGCTGCCGAGGATCTTTCAGAGGGACCCTGAGAAGC
AGATGCTTTCTCGGTTTACGACAGCCATCTACTTCCCTAAGCGTGGAGGACTTGCCCCGCTCTT
GGTTACAGTTACTGACATTGGCCACTGAGATGAAATAATAGTAACTAAAACTGGCCTCCCTGAG
AGTACCTGAGATCCGTTCTTAGTGTGGCCTCCATGACACTCCAGTGCTTGGTGAGTCCTCCAGT
GCCTCAGTGCCTGCCATTCCCCACGGAAGGCCTGAGGCGACAGAAAATGCTGAGGAGGGATGTT
TCCTCTTGTCCAGAATTCTCAGGCTACCGTCTCACCTTTGTCTGGGGAGGGTTCAGGAGGTGGG
CCAAGGGAGGGGAAGCCTTATCTACAAAAAATAGAACAGTTTATGTCTGAAGACATCACCAGAA
GTCAGTTTCTGACTCTTGAAATGTTTAAAGGATTTAATGATGCATACAGTGCTTCCATTCAGGC
CCAGCGTTAAGTAAGTACTCGCCATTTCCTAGTTCTCGGTTCCTTTGTAACGTGGAAGGCTGCA
CGACAGAGTTGCTTAGAACTAAAATTGGGGCACTGCTGAGATGGCTTAGCAGGCAAAAGCCCTT
GTCACCAAAAGTGACATGAGTTTGATTCCCAGGACCCATGTAATGGAAGGAAAGAATCTCAAAT
TGCTTGTCATCCAATACACAGACTCTGATGTGCTTGGAGCTCCTCTCTAGCATGAGAGGACACC
ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACTAAG
TAAATATAATGGAAAGTTTTTATTTTATCTAAGCATTACAGGTCGAATTATGTGATTTTTGAGT
CATTGCCATATTCCCTCCACCTGAAACAGAGCTGGTTCTCACTTAGTTGACCAAGTGGTTGTCT
TCTAATCCTATCCTATTGTACTATACCCTTTAAGCACAGTCAGATTGCTCTTAAGTTTTGTGCC
TTGATTTTCAATAGTCCAGCTTTGGGCAGCTAACATCACTATATATAATGATTTGGAGAACCAA
AGATTTTGGAATGCTTAGTTTTATTTACCTGCCTAGTCTGTATAGAAATGTGGGCTAGTTAGTC
TAATTGCCCAGCATGTGTGAGGTCTGGATTCAGTACAAAGCACCAGAAGTCTGAGACAGAAGAC
TTAGCACATGCTGAAGGCCAGCTTGGGCTACCTAGTGAGTACCAGCCTATCCTGGGCTACAGTG
TAAGACCCTATATTGATTGAGGACACAGGAGGGAAGAGAGAAACAGAGACAGAATGAGAATATA
CTCCTGTCAGCCATCTGCCCATAGATGTATGTTTTAATCTAAGCGAGGCAAAATCAGGATATAT
AGTGTGGATTTTTAAATAGTTAATTGTAGACAATTAACAGCCAATTCGATATTGATGCTTTTTG
TATAGGACCAATAGGCAAGTGTAATGTGTTGAGAAACGTATTTCCAAACACTCAGAACACCTAG
GCTAAAGCCTGCTCCTGTAACTCCTGGACCTAACGTAGAAGGATCGAAGAATCTCTGTGAGGGA
GGGCCCATGTAGTGACGCAGACTTCCGTCTACTTATGAGTAACTTTCGCGGAAGGGAAAGCTTT
GTCATATAAAGTATTCTGTCAAGCGCTTTAAGAATGATAAGCCTGTACAAACTTATGACAATGT
GTTCTAAGCATGGGAACCAGTTCATGAGTTTGTTAAATGTAGTTCTGTCAACATGGGACATATG
ACGATGACATGTGTATTGTATGTGAACTTTCTAGACAAAGTTATGTTTTAAACAAGATAAAACT
GGTATATGCTTACCAGGTTAAGATTTGGTTTTGTCCTCAGGTATAGTTTATGGTACTACTGAAA
TAGTTTTAATGTTATTACTCTGATCTGAATTTGTAATATATAGTCTACTTTGGGATGATTAATA
AAAATTTTTAATCTCTTGTG

hide sequence

RefSeq Acc Id:

XM_006238169 ⟹ XP_006238231

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	73,135,371 - 73,191,772 (+)	NCBI
mRatBN7.2	5	68,340,041 - 68,396,412 (+)	NCBI
Rnor_6.0	5	70,522,239 - 70,578,270 (+)	NCBI
Rnor_5.0	5	74,697,518 - 74,754,106 (+)	NCBI

Sequence:

show sequence

TGAGGGCCTCCGGGCTGTGTATCTGAGCCTGGGCGTGGGCGGGTTCCCTCAGGCATGAGTCGCT
GGTCTACTCGTACCCTGGCCGGCGGTCCGCCACCCTTTGGGTGCCCGCCCTACGGCGGCGGGGA
GGAGTCCGACGTCGGCCGCAGAAGTACCTCTGTTGACAGGAAACAAGATTCTGTTTCATAAAGA
AGATGAAAACAACTGGGTTCCTGTTAACAAACACCCAAGAGACCAGCATAGACCAATGAGCAGA
GTCAATAAGAACGTGGTCTTGGCCCTTCTAACACTGATGAGCTGTGCCTTCCTGCTGTTTCAGC
TGTACTACTACAAGCACTACTTGTCAGCACGGAATGGAACGGGTTCATCAAAATCCAAAGGAAA
TCGAGTTGGATTTGATAGCACACAATGGCGTGCAGTTAAGAAATTTATTATGCTGACATCCAGC
CAAAATGTGCCGGTGTTCCTTATTGACCCTTGGATTCTGGAATCAATTAATAAAAATTTCGAAC
AAGTGAAAAATGCCTCTCAAGGCTCGGCCTCAGAATGCAGATTTTTCTGTGTTCCGAGAGACTT
CACTGCGTTCGCGCTGCAGTATCACCTGTGGAAGAATGAGGATGGATGGTTTCAGATGGCTGAG
AACATGGGATTCCAGTGCCTGAAGATTGAAAGCAAAGATCCTCGGCTGGATGGAATAGACTCGC
TTTCCGGAACTGAGATCCCTCTGCACTATGTCTGTAAGCTGGCCACTCACGCCATCCACTTGGT
CGTCTTTCACGAGAGGAGTGGCAACTACCTCTGGCATGGTCACCTACGACTCAAAGGGCACATG
GATAGGAAGTTTGTTCCTTTTCGAAGGCTACAATTTGGTCGTTATCCTGGAGCCTTTGACAGGC
CGGAGTTACAGCAGGTTACTGTTGATGGACTCGACATGCTTATTCCAAAAGACCCAGGGCGCTT
TCTAGAAGAAGTACCTCACTCCAGATTTATCGAGTGCAGGTATAAAGAAGCCCGGGCATTCCTT
CAGCAGTACGTCGATGACAACACTGTGGATGCCATGGCCTTTCGGAAGAGGGCAAAGGAGTTAC
TGCAACTAGCGGCCAAGACGCTGAAGGCGCTGGGAGTGCCCTTCTGGCTGAGCAGTGGGACGTG
TCTAGGATGGTATCGGCAATGCAGTATCATTCCTTATAGCAAAGATGTCGACCTAGGAATTTTC
ATTCAAGATTACAAACCTGATATTGTTTTGGCATTTCAGGATGCAGGACTTCCACTCAAACACA
AGTTTGGGAAGGTGGAGGACAGCTTGGAACTCTCCTTCCAGGGACAAGCTGATGTAAAACTTGA
TATTTTTTTCTTCTATGAAGAGACTGACCATATGTGGAATGGAGGCACGCAGGCCAGAACAGGA
AAGAAGTTTAAGTATCTGTTCCCCAAGTTTACACTGTGCTGGACGGAGTTTGTAGACATAAAAG
TCCATGTTCCCTGTGAAACAGTTGACTACATTGAAGCCAACTATGGCAAGGCCTGGAAGATCCC
TGTCAAGACCTGGGACTGGAAGAGCTCACCCCCGAATGTGCAGCCCAATGGGGTCTGGCCTATT
TCGGAGTGGGATGAAGTTATCCAGTTGTACTGAGAACACTGAGCTCATGTGGGACGTTTCCCAG
AAAGAAGGTAGGCAGCTGTTGAAAGCACTATGTTTTCTGCCTGATGTGAGAGCCAAAGAGGAGA
AATGACGAGTTGGAAGACAGAAAAGGTTTTCTGACTCATGGGCCATCTAATCAGTTCTGCCACT
CAGCATTTACTGAGGAGTTTATACACCAGGTGAAGTACTAGGATCTGGTGAACAGGCAGAGAGG
AATGAGAGGCCAGCTTCTCTCTTGCCCTGTTGGTAAGCACTACAATTTTATGTTAAGGGAAACT
AACCCACTCTCTGAAGAGGTGTACAGTAGAATGTATTCCATAATGATTTTTAAAATGTTAATTA
ATGTTTAAACCGGAAAGTGAGCTCATCAGACAAAGCTAACAAAGGATGTGTTAGTTGAGAGTAG
TTCATTTCTGCCTGCCCTCGGGATTTAAGCTGCTGTGTTAGTGTTAAGGTTGTGGGATATGAGT
TAATATTCCAGTGAGTGATTAGACTTTGTCTCACAGAGAAAAGACAGTGGCCAACTCATTTTAC
AAGCAGTGTGATACACAGTTGACTTCAAGCACTGGGCATTCTATAAGGGAGGATGAGAGCCGAT
AGCAGCTCTTGTCAAGACGTACACTGTTTTCATCTTTGAGATGAACATGGATGCTTAGATGGTG
CTTGAATCCCTGACATCATAAGGATATTTTCACTGACCTGCAGTAGTACTTCCTGATAAATCAT
TCAGTCGTGCTATCCAAAAGTTGTGACATCTCAAAGCTTCCGTTCCTTATTTCATTCTTAGTCA
CTCTTAAACTCAAAAATGGAAGTTACTCATGAATATTTTTATATTTTATGAATGTATAACTTTT
CTGCCTTTAATTTTAATATTGACACTAAGTAATAATAGACATACCTCTTAATTTTTTAAAAATA
CCCTTTATTTATTTATCAACCATAGTTCCATGTGTTTAATTTATGGCCTACACACTAATTTATT
TAGCACAAGATATGCCTGTTCTTCTATCCAATATTACTTCACGGTTCCAAAATGAAGGGTTAAC
GTGAACCTGGCCATTACTCCTTTTCCCAGATTACTGTCTTTAAAGCCTGTGTCCATCTCTAGAT
TTTCATTCTGCTGAGTGTAATAGGGCAAGGGCTTCCTACCCACAAGTACTGCACAAGTGGGACC
CTTGACCTACACTCCTGAGTCCATTGTAGTGGCTGCACATAAGCCATGCAGTCTCAGAGAGAGA
TGACACAGTGAGTGCCTGCCTGCCTTGCCTGGGAGGGGAGGGTCCACTCCCTGCTGCTTAGGGA
TGTGCTTCATGGCAACCTGGCAGATTTCCCTTGGCACGTGTAGTTACTACAGCAGAAACCAGGA
TAGATGAGAGAATGGGCTGGCAGAAAGAAAAGAAAAAAGAAAGAAAAAGAAAAACTTGGAGGAA
GTAACTTGAAGCCACCTATTTCCAAATTTAAACTTCAACATGAAAACTGTCTTTGTTGGATGAT
ATGCAGCAGTCTCCATGCAGCCTCCAAGTAGGAATATTGTCTCTCCATAAGCATCATCTAATCA
GAGTGTTACAGTTATTAGCACACATGTACCCAAATGACAAATCATAATCAGCTCTTTCCTAGAA
AATAAGTCCATAGAATACGTACCCAAGTTGTAGATACCCAACCCTACATATTTTTCTGTGTGCG
CATGCGTGTGCACGCACACACCCCCACTCGCACACACCAGATAATAGTGTTTTTGAGGACAAAC
CCACCCTACCTGGAGAGGATCATTTACTTGTACTCAATATCAAGAAGTATGTTTATATCGTGTT
CCTTGAGAGCTCCCACCTTCTGCCAGGAGATCTTACCCACCCCTGTTTAAGTTTCTTCTCTCAT
ACCTGTCGTTGGAGTGCAAGGTCTGCCAGTGTCCATAATACAAGCTCTTGGTCCTGGGCACAGA
GGTTCTGTAGTCTTCCCTTCATAGAGGATGGGTACCTGTTTTCCCTCTGGTTTGGCTTTAGGTT
TTAGGTTCCGCCCACCGTGGAGAAATTTTCCCAGAATTTGCAGGTGAGGTTTACCTCTAAAAAT
GACTCCATGATTCAGTCATACTGAAGTCAGTGCTTCTTAACTCTTGAACTCTGCTGAGTGTCCC
GAGATCTTGGGTCAGGTCTGCCCACCACCTGAACCTTTTCAGATCACTTCTCTTCCCTCCCTGA
ATATGCTAACTGTTATTCTCCTAATATGAGTGCTTTCTGGTCCCATTTGCCTGGACTGCTTGAA
GATACCTTTACATTAACTCATTGGTAGTTCTGCTGCCGAGGATCTTTCAGAGGGACCCTGAGAA
GCAGATGCTTTCTCGGTTTACGACAGCCATCTACTTCCCTAAGCGTGGAGGACTTGCCCCGCTC
TTGGTTACAGTTACTGACATTGGCCACTGAGATGAAATAATAGTAACTAAAACTGGCCTCCCTG
AGAGTACCTGAGATCCGTTCTTAGTGTGGCCTCCATGACACTCCAGTGCTTGGTGAGTCCTCCA
GTGCCTCAGTGCCTGCCATTCCCCACGGAAGGCCTGAGGCGACAGAAAATGCTGAGGAGGGATG
TTTCCTCTTGTCCAGAATTCTCAGGCTACCGTCTCACCTTTGTCTGGGGAGGGTTCAGGAGGTG
GGCCAAGGGAGGGGAAGCCTTATCTACAAAAAATAGAACAGTTTATGTCTGAAGACATCACCAG
AAGTCAGTTTCTGACTCTTGAAATGTTTAAAGGATTTAATGATGCATACAGTGCTTCCATTCAG
GCCCAGCGTTAAGTAAGTACTCGCCATTTCCTAGTTCTCGGTTCCTTTGTAACGTGGAAGGCTG
CACGACAGAGTTGCTTAGAACTAAAATTGGGGCACTGCTGAGATGGCTTAGCAGGCAAAAGCCC
TTGTCACCAAAAGTGACATGAGTTTGATTCCCAGGACCCATGTAATGGAAGGAAAGAATCTCAA
ATTGCTTGTCATCCAATACACAGACTCTGATGTGCTTGGAGCTCCTCTCTAGCATGAGAGGACA
CCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACTA
AGTAAATATAATGGAAAGTTTTTATTTTATCTAAGCATTACAGGTCGAATTATGTGATTTTTGA
GTCATTGCCATATTCCCTCCACCTGAAACAGAGCTGGTTCTCACTTAGTTGACCAAGTGGTTGT
CTTCTAATCCTATCCTATTGTACTATACCCTTTAAGCACAGTCAGATTGCTCTTAAGTTTTGTG
CCTTGATTTTCAATAGTCCAGCTTTGGGCAGCTAACATCACTATATATAATGATTTGGAGAACC
AAAGATTTTGGAATGCTTAGTTTTATTTACCTGCCTAGTCTGTATAGAAATGTGGGCTAGTTAG
TCTAATTGCCCAGCATGTGTGAGGTCTGGATTCAGTACAAAGCACCAGAAGTCTGAGACAGAAG
ACTTAGCACATGCTGAAGGCCAGCTTGGGCTACCTAGTGAGTACCAGCCTATCCTGGGCTACAG
TGTAAGACCCTATATTGATTGAGGACACAGGAGGGAAGAGAGAAACAGAGACAGAATGAGAATA
TACTCCTGTCAGCCATCTGCCCATAGATGTATGTTTTAATCTAAGCGAGGCAAAATCAGGATAT
ATAGTGTGGATTTTTAAATAGTTAATTGTAGACAATTAACAGCCAATTCGATATTGATGCTTTT
TGTATAGGACCAATAGGCAAGTGTAATGTGTTGAGAAACGTATTTCCAAACACTCAGAACACCT
AGGCTAAAGCCTGCTCCTGTAACTCCTGGACCTAACGTAGAAGGATCGAAGAATCTCTGTGAGG
GAGGGCCCATGTAGTGACGCAGACTTCCGTCTACTTATGAGTAACTTTCGCGGAAGGGAAAGCT
TTGTCATATAAAGTATTCTGTCAAGCGCTTTAAGAATGATAAGCCTGTACAAACTTATGACAAT
GTGTTCTAAGCATGGGAACCAGTTCATGAGTTTGTTAAATGTAGTTCTGTCAACATGGGACATA
TGACGATGACATGTGTATTGTATGTGAACTTTCTAGACAAAGTTATGTTTTAAACAAGATAAAA
CTGGTATATGCTTACCAGGTTAAGATTTGGTTTTGTCCTCAGGTATAGTTTATGGTACTACTGA
AATAGTTTTAATGTTATTACTCTGATCTGAATTTGTAATATATAGTCTACTTTGGGATGATTAA
TAAAAATTTTTAATCTCTTGTG

hide sequence

RefSeq Acc Id:

XM_008763712 ⟹ XP_008761934

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	73,135,366 - 73,191,772 (+)	NCBI
mRatBN7.2	5	68,340,041 - 68,396,412 (+)	NCBI
Rnor_6.0	5	70,522,239 - 70,578,270 (+)	NCBI

Sequence:

show sequence

TGAGGGCCTCCGGGCTGTGTATCTGAGCCTGGGCGTGGGCGGGTTCCCTCAGGCATGAGTCGCT
GGTCTACTCGTACCCTGGCCGGCGGTCCGCCACCCTTTGGGTGCCCGCCCTACGGCGGCGGGGA
GGAGTCCGACGTCGGCCGCAGATTCAGATTGTGTGTGTGGATTGTTTCAAAGCTCCGCACAAAG
ACTTAGGACTTTAATTAAAATGGCAGAGTGAAAATACTTGTACTTTATTCAATCTGAAGTTACC
CTGAAAAAAACATGAAAAATGGAAGATGGATCTTAACACAGCTTCCCCAACGCAAATATTGCTG
TGACCCCAAACTGAAATGTTTGAGAGGTGGTTGCCACAGAAGTACCTCTGTTGACAGGAAACAA
GATTCTGTTTCATAAAGAAGATGAAAACAACTGGGTTCCTGTTAACAAACACCCAAGAGACCAG
CATAGACCAATGAGCAGAGTCAATAAGAACGTGGTCTTGGCCCTTCTAACACTGATGAGCTGTG
CCTTCCTGCTGTTTCAGCTGTACTACTACAAGCACTACTTGTCAGCACGGAATGGAACGGGTTC
ATCAAAATCCAAAGGAAATCGAGTTGGATTTGATAGCACACAATGGCGTGCAGTTAAGAAATTT
ATTATGCTGACATCCAGCCAAAATGTGCCGGTGTTCCTTATTGACCCTTGGATTCTGGAATCAA
TTAATAAAAATTTCGAACAAGTGAAAAATGCCTCTCAAGGCTCGGCCTCAGAATGCAGATTTTT
CTGTGTTCCGAGAGACTTCACTGCGTTCGCGCTGCAGTATCACCTGTGGAAGAATGAGGATGGA
TGGTTTCAGATGGCTGAGAACATGGGATTCCAGTGCCTGAAGATTGAAAGCAAAGATCCTCGGC
TGGATGGAATAGACTCGCTTTCCGGAACTGAGATCCCTCTGCACTATGTCTGTAAGCTGGCCAC
TCACGCCATCCACTTGGTCGTCTTTCACGAGAGGAGTGGCAACTACCTCTGGCATGGTCACCTA
CGACTCAAAGGGCACATGGATAGGAAGTTTGTTCCTTTTCGAAGGCTACAATTTGGTCGTTATC
CTGGAGCCTTTGACAGGCCGGAGTTACAGCAGGTTACTGTTGATGGACTCGACATGCTTATTCC
AAAAGACCCAGGGCGCTTTCTAGAAGAAGTACCTCACTCCAGATTTATCGAGTGCAGGTATAAA
GAAGCCCGGGCATTCCTTCAGCAGTACGTCGATGACAACACTGTGGATGCCATGGCCTTTCGGA
AGAGGGCAAAGGAGTTACTGCAACTAGCGGCCAAGACGCTGAAGGCGCTGGGAGTGCCCTTCTG
GCTGAGCAGTGGGACGTGTCTAGGATGGTATCGGCAATGCAGTATCATTCCTTATAGCAAAGAT
GTCGACCTAGGAATTTTCATTCAAGATTACAAACCTGATATTGTTTTGGCATTTCAGGATGCAG
GACTTCCACTCAAACACAAGTTTGGGAAGGTGGAGGACAGCTTGGAACTCTCCTTCCAGGGACA
AGCTGATGTAAAACTTGATATTTTTTTCTTCTATGAAGAGACTGACCATATGTGGAATGGAGGC
ACGCAGGCCAGAACAGGAAAGAAGTTTAAGTATCTGTTCCCCAAGTTTACACTGTGCTGGACGG
AGTTTGTAGACATAAAAGTCCATGTTCCCTGTGAAACAGTTGACTACATTGAAGCCAACTATGG
CAAGGCCTGGAAGATCCCTGTCAAGACCTGGGACTGGAAGAGCTCACCCCCGAATGTGCAGCCC
AATGGGGTCTGGCCTATTTCGGAGTGGGATGAAGTTATCCAGTTGTACTGAGAACACTGAGCTC
ATGTGGGACGTTTCCCAGAAAGAAGGTAGGCAGCTGTTGAAAGCACTATGTTTTCTGCCTGATG
TGAGAGCCAAAGAGGAGAAATGACGAGTTGGAAGACAGAAAAGGTTTTCTGACTCATGGGCCAT
CTAATCAGTTCTGCCACTCAGCATTTACTGAGGAGTTTATACACCAGGTGAAGTACTAGGATCT
GGTGAACAGGCAGAGAGGAATGAGAGGCCAGCTTCTCTCTTGCCCTGTTGGTAAGCACTACAAT
TTTATGTTAAGGGAAACTAACCCACTCTCTGAAGAGGTGTACAGTAGAATGTATTCCATAATGA
TTTTTAAAATGTTAATTAATGTTTAAACCGGAAAGTGAGCTCATCAGACAAAGCTAACAAAGGA
TGTGTTAGTTGAGAGTAGTTCATTTCTGCCTGCCCTCGGGATTTAAGCTGCTGTGTTAGTGTTA
AGGTTGTGGGATATGAGTTAATATTCCAGTGAGTGATTAGACTTTGTCTCACAGAGAAAAGACA
GTGGCCAACTCATTTTACAAGCAGTGTGATACACAGTTGACTTCAAGCACTGGGCATTCTATAA
GGGAGGATGAGAGCCGATAGCAGCTCTTGTCAAGACGTACACTGTTTTCATCTTTGAGATGAAC
ATGGATGCTTAGATGGTGCTTGAATCCCTGACATCATAAGGATATTTTCACTGACCTGCAGTAG
TACTTCCTGATAAATCATTCAGTCGTGCTATCCAAAAGTTGTGACATCTCAAAGCTTCCGTTCC
TTATTTCATTCTTAGTCACTCTTAAACTCAAAAATGGAAGTTACTCATGAATATTTTTATATTT
TATGAATGTATAACTTTTCTGCCTTTAATTTTAATATTGACACTAAGTAATAATAGACATACCT
CTTAATTTTTTAAAAATACCCTTTATTTATTTATCAACCATAGTTCCATGTGTTTAATTTATGG
CCTACACACTAATTTATTTAGCACAAGATATGCCTGTTCTTCTATCCAATATTACTTCACGGTT
CCAAAATGAAGGGTTAACGTGAACCTGGCCATTACTCCTTTTCCCAGATTACTGTCTTTAAAGC
CTGTGTCCATCTCTAGATTTTCATTCTGCTGAGTGTAATAGGGCAAGGGCTTCCTACCCACAAG
TACTGCACAAGTGGGACCCTTGACCTACACTCCTGAGTCCATTGTAGTGGCTGCACATAAGCCA
TGCAGTCTCAGAGAGAGATGACACAGTGAGTGCCTGCCTGCCTTGCCTGGGAGGGGAGGGTCCA
CTCCCTGCTGCTTAGGGATGTGCTTCATGGCAACCTGGCAGATTTCCCTTGGCACGTGTAGTTA
CTACAGCAGAAACCAGGATAGATGAGAGAATGGGCTGGCAGAAAGAAAAGAAAAAAGAAAGAAA
AAGAAAAACTTGGAGGAAGTAACTTGAAGCCACCTATTTCCAAATTTAAACTTCAACATGAAAA
CTGTCTTTGTTGGATGATATGCAGCAGTCTCCATGCAGCCTCCAAGTAGGAATATTGTCTCTCC
ATAAGCATCATCTAATCAGAGTGTTACAGTTATTAGCACACATGTACCCAAATGACAAATCATA
ATCAGCTCTTTCCTAGAAAATAAGTCCATAGAATACGTACCCAAGTTGTAGATACCCAACCCTA
CATATTTTTCTGTGTGCGCATGCGTGTGCACGCACACACCCCCACTCGCACACACCAGATAATA
GTGTTTTTGAGGACAAACCCACCCTACCTGGAGAGGATCATTTACTTGTACTCAATATCAAGAA
GTATGTTTATATCGTGTTCCTTGAGAGCTCCCACCTTCTGCCAGGAGATCTTACCCACCCCTGT
TTAAGTTTCTTCTCTCATACCTGTCGTTGGAGTGCAAGGTCTGCCAGTGTCCATAATACAAGCT
CTTGGTCCTGGGCACAGAGGTTCTGTAGTCTTCCCTTCATAGAGGATGGGTACCTGTTTTCCCT
CTGGTTTGGCTTTAGGTTTTAGGTTCCGCCCACCGTGGAGAAATTTTCCCAGAATTTGCAGGTG
AGGTTTACCTCTAAAAATGACTCCATGATTCAGTCATACTGAAGTCAGTGCTTCTTAACTCTTG
AACTCTGCTGAGTGTCCCGAGATCTTGGGTCAGGTCTGCCCACCACCTGAACCTTTTCAGATCA
CTTCTCTTCCCTCCCTGAATATGCTAACTGTTATTCTCCTAATATGAGTGCTTTCTGGTCCCAT
TTGCCTGGACTGCTTGAAGATACCTTTACATTAACTCATTGGTAGTTCTGCTGCCGAGGATCTT
TCAGAGGGACCCTGAGAAGCAGATGCTTTCTCGGTTTACGACAGCCATCTACTTCCCTAAGCGT
GGAGGACTTGCCCCGCTCTTGGTTACAGTTACTGACATTGGCCACTGAGATGAAATAATAGTAA
CTAAAACTGGCCTCCCTGAGAGTACCTGAGATCCGTTCTTAGTGTGGCCTCCATGACACTCCAG
TGCTTGGTGAGTCCTCCAGTGCCTCAGTGCCTGCCATTCCCCACGGAAGGCCTGAGGCGACAGA
AAATGCTGAGGAGGGATGTTTCCTCTTGTCCAGAATTCTCAGGCTACCGTCTCACCTTTGTCTG
GGGAGGGTTCAGGAGGTGGGCCAAGGGAGGGGAAGCCTTATCTACAAAAAATAGAACAGTTTAT
GTCTGAAGACATCACCAGAAGTCAGTTTCTGACTCTTGAAATGTTTAAAGGATTTAATGATGCA
TACAGTGCTTCCATTCAGGCCCAGCGTTAAGTAAGTACTCGCCATTTCCTAGTTCTCGGTTCCT
TTGTAACGTGGAAGGCTGCACGACAGAGTTGCTTAGAACTAAAATTGGGGCACTGCTGAGATGG
CTTAGCAGGCAAAAGCCCTTGTCACCAAAAGTGACATGAGTTTGATTCCCAGGACCCATGTAAT
GGAAGGAAAGAATCTCAAATTGCTTGTCATCCAATACACAGACTCTGATGTGCTTGGAGCTCCT
CTCTAGCATGAGAGGACACCACACACACACACACACACACACACACACACACACACACACACAC
ACACACACACACACACTAAGTAAATATAATGGAAAGTTTTTATTTTATCTAAGCATTACAGGTC
GAATTATGTGATTTTTGAGTCATTGCCATATTCCCTCCACCTGAAACAGAGCTGGTTCTCACTT
AGTTGACCAAGTGGTTGTCTTCTAATCCTATCCTATTGTACTATACCCTTTAAGCACAGTCAGA
TTGCTCTTAAGTTTTGTGCCTTGATTTTCAATAGTCCAGCTTTGGGCAGCTAACATCACTATAT
ATAATGATTTGGAGAACCAAAGATTTTGGAATGCTTAGTTTTATTTACCTGCCTAGTCTGTATA
GAAATGTGGGCTAGTTAGTCTAATTGCCCAGCATGTGTGAGGTCTGGATTCAGTACAAAGCACC
AGAAGTCTGAGACAGAAGACTTAGCACATGCTGAAGGCCAGCTTGGGCTACCTAGTGAGTACCA
GCCTATCCTGGGCTACAGTGTAAGACCCTATATTGATTGAGGACACAGGAGGGAAGAGAGAAAC
AGAGACAGAATGAGAATATACTCCTGTCAGCCATCTGCCCATAGATGTATGTTTTAATCTAAGC
GAGGCAAAATCAGGATATATAGTGTGGATTTTTAAATAGTTAATTGTAGACAATTAACAGCCAA
TTCGATATTGATGCTTTTTGTATAGGACCAATAGGCAAGTGTAATGTGTTGAGAAACGTATTTC
CAAACACTCAGAACACCTAGGCTAAAGCCTGCTCCTGTAACTCCTGGACCTAACGTAGAAGGAT
CGAAGAATCTCTGTGAGGGAGGGCCCATGTAGTGACGCAGACTTCCGTCTACTTATGAGTAACT
TTCGCGGAAGGGAAAGCTTTGTCATATAAAGTATTCTGTCAAGCGCTTTAAGAATGATAAGCCT
GTACAAACTTATGACAATGTGTTCTAAGCATGGGAACCAGTTCATGAGTTTGTTAAATGTAGTT
CTGTCAACATGGGACATATGACGATGACATGTGTATTGTATGTGAACTTTCTAGACAAAGTTAT
GTTTTAAACAAGATAAAACTGGTATATGCTTACCAGGTTAAGATTTGGTTTTGTCCTCAGGTAT
AGTTTATGGTACTACTGAAATAGTTTTAATGTTATTACTCTGATCTGAATTTGTAATATATAGT
CTACTTTGGGATGATTAATAAAAATTTTTAATCTCTTGTG

hide sequence

RefSeq Acc Id:

XM_039110244 ⟹ XP_038966172

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	73,135,386 - 73,191,772 (+)	NCBI
mRatBN7.2	5	68,340,041 - 68,396,412 (+)	NCBI

RefSeq Acc Id:

XM_039110247 ⟹ XP_038966175

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	73,135,373 - 73,191,772 (+)	NCBI
mRatBN7.2	5	68,340,041 - 68,392,141 (+)	NCBI

RefSeq Acc Id:

XM_039110248 ⟹ XP_038966176

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	73,135,365 - 73,191,772 (+)	NCBI
mRatBN7.2	5	68,340,041 - 68,392,110 (+)	NCBI

RefSeq Acc Id:

XM_039110249 ⟹ XP_038966177

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	73,135,373 - 73,191,772 (+)	NCBI
mRatBN7.2	5	68,340,041 - 68,392,141 (+)	NCBI

RefSeq Acc Id:

XM_063287921 ⟹ XP_063143991

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	73,134,746 - 73,191,772 (+)	NCBI

RefSeq Acc Id:

XM_063287923 ⟹ XP_063143993

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	73,135,400 - 73,191,772 (+)	NCBI

RefSeq Acc Id:

XM_063287924 ⟹ XP_063143994

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	73,140,508 - 73,191,772 (+)	NCBI

RefSeq Acc Id:

XM_063287925 ⟹ XP_063143995

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	73,134,746 - 73,191,772 (+)	NCBI

RefSeq Acc Id:

XM_063287926 ⟹ XP_063143996

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	73,134,746 - 73,191,772 (+)	NCBI

RefSeq Acc Id:

XM_063287927 ⟹ XP_063143997

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	73,134,746 - 73,191,772 (+)	NCBI

RefSeq Acc Id:

XM_063287928 ⟹ XP_063143998

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	73,135,382 - 73,191,772 (+)	NCBI

RefSeq Acc Id:

XM_063287929 ⟹ XP_063143999

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	73,134,746 - 73,191,772 (+)	NCBI

RefSeq Acc Id:

XR_005504477

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	73,135,400 - 73,169,531 (+)	NCBI
mRatBN7.2	5	68,340,041 - 68,374,268 (+)	NCBI

RefSeq Acc Id:

XR_005504478

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	73,135,400 - 73,187,420 (+)	NCBI
mRatBN7.2	5	68,340,041 - 68,392,056 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001102137	(Get FASTA)	NCBI Sequence Viewer
	NP_001423932	(Get FASTA)	NCBI Sequence Viewer
	NP_001423934	(Get FASTA)	NCBI Sequence Viewer
	NP_001423935	(Get FASTA)	NCBI Sequence Viewer
	NP_001423936	(Get FASTA)	NCBI Sequence Viewer
	NP_001423937	(Get FASTA)	NCBI Sequence Viewer
	NP_001423939	(Get FASTA)	NCBI Sequence Viewer
	NP_001423940	(Get FASTA)	NCBI Sequence Viewer
	NP_001423941	(Get FASTA)	NCBI Sequence Viewer
	NP_001423942	(Get FASTA)	NCBI Sequence Viewer
	NP_001423943	(Get FASTA)	NCBI Sequence Viewer
	XP_006238228	(Get FASTA)	NCBI Sequence Viewer
	XP_006238231	(Get FASTA)	NCBI Sequence Viewer
	XP_008761934	(Get FASTA)	NCBI Sequence Viewer
	XP_038966172	(Get FASTA)	NCBI Sequence Viewer
	XP_038966175	(Get FASTA)	NCBI Sequence Viewer
	XP_038966176	(Get FASTA)	NCBI Sequence Viewer
	XP_038966177	(Get FASTA)	NCBI Sequence Viewer
	XP_063143991	(Get FASTA)	NCBI Sequence Viewer
	XP_063143993	(Get FASTA)	NCBI Sequence Viewer
	XP_063143994	(Get FASTA)	NCBI Sequence Viewer
	XP_063143995	(Get FASTA)	NCBI Sequence Viewer
	XP_063143996	(Get FASTA)	NCBI Sequence Viewer
	XP_063143997	(Get FASTA)	NCBI Sequence Viewer
	XP_063143998	(Get FASTA)	NCBI Sequence Viewer
	XP_063143999	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL91708	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000032995
	ENSRNOP00000032995.4
	ENSRNOP00000108834
	ENSRNOP00000108834.1

RefSeq Acc Id:

NP_001102137 ⟸ NM_001108667

- UniProtKB:

D3ZI33 (UniProtKB/TrEMBL), A6KDP7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSRVNKNVVLALLTLMSCAFLLFQLYYYKHYLSARNGTGSSKSKGNRVGFDSTQWRAVKKFIML
TSSQNVPVFLIDPWILESINKNFEQVKNASQGSASECRFFCVPRDFTAFALQYHLWKNEDGWFQ
MAENMGFQCLKIESKDPRLDGIDSLSGTEIPLHYVCKLATHAIHLVVFHERSGNYLWHGHLRLK
GHMDRKFVPFRRLQFGRYPGAFDRPELQQVTVDGLDMLIPKDPGRFLEEVPHSRFIECRYKEAR
AFLQQYVDDNTVDAMAFRKRAKELLQLAAKTLKALGVPFWLSSGTCLGWYRQCSIIPYSKDVDL
GIFIQDYKPDIVLAFQDAGLPLKHKFGKVEDSLELSFQGQADVKLDIFFFYEETDHMWNGGTQA
RTGKKFKYLFPKFTLCWTEFVDIKVHVPCETVDYIEANYGKAWKIPVKTWDWKSSPPNVQPNGV
WPISEWDEVIQLY

hide sequence

RefSeq Acc Id:

XP_006238228 ⟸ XM_006238166

- Peptide Label:

isoform X1

- Sequence:

show sequence

MSRVNKNVVLALLTLMSCAFLLFQLYYYKHYLSARNGTGSSKSKGNRVGFDSTQWRAVKKFIML
TSSQNVPVFLIDPWILESINKNFEQVKNASQGSASECRFFCVPRDFTAFALQYHLWKNEDGWFQ
MAENMGFQCLKIESKDPRLDGIDSLSGTEIPLHYVCKLATHAIHLVVFHERSGNYLWHGHLRLK
GHMDRKFVPFRRLQFGRYPGAFDRPELQQVTVDGLDMLIPKDPGRFLEEVPHSRFIECRYKEAR
AFLQQYVDDNTVDAMAFRKRAKELLQLAAKTLKALGVPFWLSSGTCLGWYRQCSIIPYSKDVDL
GIFIQDYKPDIVLAFQDAGLPLKHKFGKVEDSLELSFQGQADVKLDIFFFYEETDHMWNGGTQA
RTGKKFKYLFPKFTLCWTEFVDIKVHVPCETVDYIEANYGKAWKIPVKTWDWKSSPPNVQPNGV
WPISEWDEVIQLY

hide sequence

RefSeq Acc Id:

XP_006238231 ⟸ XM_006238169

- Peptide Label:

isoform X1

- Sequence:

show sequence

MSRVNKNVVLALLTLMSCAFLLFQLYYYKHYLSARNGTGSSKSKGNRVGFDSTQWRAVKKFIML
TSSQNVPVFLIDPWILESINKNFEQVKNASQGSASECRFFCVPRDFTAFALQYHLWKNEDGWFQ
MAENMGFQCLKIESKDPRLDGIDSLSGTEIPLHYVCKLATHAIHLVVFHERSGNYLWHGHLRLK
GHMDRKFVPFRRLQFGRYPGAFDRPELQQVTVDGLDMLIPKDPGRFLEEVPHSRFIECRYKEAR
AFLQQYVDDNTVDAMAFRKRAKELLQLAAKTLKALGVPFWLSSGTCLGWYRQCSIIPYSKDVDL
GIFIQDYKPDIVLAFQDAGLPLKHKFGKVEDSLELSFQGQADVKLDIFFFYEETDHMWNGGTQA
RTGKKFKYLFPKFTLCWTEFVDIKVHVPCETVDYIEANYGKAWKIPVKTWDWKSSPPNVQPNGV
WPISEWDEVIQLY

hide sequence

RefSeq Acc Id:

XP_008761934 ⟸ XM_008763712

- Peptide Label:

isoform X1

- Sequence:

show sequence

MSRVNKNVVLALLTLMSCAFLLFQLYYYKHYLSARNGTGSSKSKGNRVGFDSTQWRAVKKFIML
TSSQNVPVFLIDPWILESINKNFEQVKNASQGSASECRFFCVPRDFTAFALQYHLWKNEDGWFQ
MAENMGFQCLKIESKDPRLDGIDSLSGTEIPLHYVCKLATHAIHLVVFHERSGNYLWHGHLRLK
GHMDRKFVPFRRLQFGRYPGAFDRPELQQVTVDGLDMLIPKDPGRFLEEVPHSRFIECRYKEAR
AFLQQYVDDNTVDAMAFRKRAKELLQLAAKTLKALGVPFWLSSGTCLGWYRQCSIIPYSKDVDL
GIFIQDYKPDIVLAFQDAGLPLKHKFGKVEDSLELSFQGQADVKLDIFFFYEETDHMWNGGTQA
RTGKKFKYLFPKFTLCWTEFVDIKVHVPCETVDYIEANYGKAWKIPVKTWDWKSSPPNVQPNGV
WPISEWDEVIQLY

hide sequence

Ensembl Acc Id:

ENSRNOP00000032995 ⟸ ENSRNOT00000036799

RefSeq Acc Id:	XP_038966172 ⟸ XM_039110244
- Peptide Label:	isoform X1
- UniProtKB:	D3ZI33 (UniProtKB/TrEMBL), A6KDP7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038966175 ⟸ XM_039110247
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038966177 ⟸ XM_039110249
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038966176 ⟸ XM_039110248
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063143995 ⟸ XM_063287925
- Peptide Label:	isoform X1
- UniProtKB:	A6KDP7 (UniProtKB/TrEMBL), D3ZI33 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063143991 ⟸ XM_063287921
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063143996 ⟸ XM_063287926
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063143997 ⟸ XM_063287927
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063143999 ⟸ XM_063287929
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063143998 ⟸ XM_063287928
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063143993 ⟸ XM_063287923
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063143994 ⟸ XM_063287924
- Peptide Label:	isoform X1
- UniProtKB:	A6KDP7 (UniProtKB/TrEMBL), D3ZI33 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000108834 ⟸ ENSRNOT00000127827

Protein Domains

LicD/FKTN/FKRP nucleotidyltransferase Ribitol-5-phosphate transferase FKTN N-terminal

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZI33-F1-model_v2	AlphaFold	D3ZI33	1-461	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310087	AgrOrtholog
BioCyc Gene	G2FUF-41265	BioCyc
Ensembl Genes	ENSRNOG00000028129	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000036799	ENTREZGENE
	ENSRNOT00000036799.7	UniProtKB/TrEMBL
	ENSRNOT00000127827	ENTREZGENE
	ENSRNOT00000127827.1	UniProtKB/TrEMBL
InterPro	FKTN_N	UniProtKB/TrEMBL
	Fukutin-related	UniProtKB/TrEMBL
	LicD	UniProtKB/TrEMBL
KEGG Report	rno:362520	UniProtKB/TrEMBL
NCBI Gene	362520	ENTREZGENE
PANTHER	FUKUTIN	UniProtKB/TrEMBL
	Fukutin-related	UniProtKB/TrEMBL
Pfam	FKTN_N	UniProtKB/TrEMBL
	LicD	UniProtKB/TrEMBL
PhenoGen	Fktn	PhenoGen
PROSITE	PROKAR_LIPOPROTEIN	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000028129	RatGTEx
UniProt	A0ABK0LS56_RAT	UniProtKB/TrEMBL
	A6KDP7	ENTREZGENE, UniProtKB/TrEMBL
	D3ZI33	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-25	Fktn	fukutin	Fcmd_predicted	Fukuyama type congenital muscular dystrophy homolog (human) (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-30	Fcmd_predicted	Fukuyama type congenital muscular dystrophy homolog (human) (predicted)		Fukuyama type congenital muscular dystrophy (fukutin) (predicted)	Name updated	1299863	APPROVED
2005-01-12	Fcmd_predicted	Fukuyama type congenital muscular dystrophy (fukutin) (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

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