R3hdm2 (R3H domain containing 2) - Rat Genome Database

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Gene: R3hdm2 (R3H domain containing 2) Rattus norvegicus
Analyze
Symbol: R3hdm2
Name: R3H domain containing 2
RGD ID: 1310066
Description: Predicted to enable nucleic acid binding activity. Orthologous to human R3HDM2 (R3H domain containing 2); INTERACTS WITH 1-naphthyl isothiocyanate; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC362894; R3H domain-containing protein 2; RGD1310066; similar to mKIAA1002 protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8765,097,685 - 65,225,863 (+)NCBIGRCr8
mRatBN7.2763,212,519 - 63,340,574 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl763,232,346 - 63,340,540 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx765,121,615 - 65,229,838 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0767,324,036 - 67,432,265 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0767,125,283 - 67,233,480 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0770,677,226 - 70,805,255 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl770,697,050 - 70,805,221 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0770,850,447 - 70,978,640 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4767,364,886 - 67,475,880 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1767,442,533 - 67,496,606 (+)NCBI
Celera760,371,508 - 60,479,475 (+)NCBICelera
Cytogenetic Map7q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
1-naphthyl isothiocyanate  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (EXP)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (EXP)
acrolein  (ISO)
aflatoxin B1  (ISO)
alpha-pinene  (ISO)
amitrole  (EXP)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
benzo[b]fluoranthene  (ISO)
benzo[e]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
buspirone  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (ISO)
cocaine  (EXP)
coumarin  (EXP)
coumestrol  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP)
dicrotophos  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
enzyme inhibitor  (ISO)
ethanol  (ISO)
FR900359  (ISO)
fulvestrant  (ISO)
furan  (EXP)
hydrogen peroxide  (ISO)
indometacin  (ISO)
lead(0)  (ISO)
leflunomide  (EXP)
menadione  (ISO)
methapyrilene  (EXP,ISO)
methimazole  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodimethylamine  (EXP)
nefazodone  (EXP)
niclosamide  (ISO)
nimesulide  (EXP)
ozone  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
rotenone  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sulfadimethoxine  (EXP)
sunitinib  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloromethane  (EXP)
thioacetamide  (EXP)
trichloroethene  (EXP)
triptonide  (ISO)
tungsten  (ISO)
valdecoxib  (EXP)
valproic acid  (ISO)
vinclozolin  (EXP)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:22658674  


Genomics

Comparative Map Data
R3hdm2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8765,097,685 - 65,225,863 (+)NCBIGRCr8
mRatBN7.2763,212,519 - 63,340,574 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl763,232,346 - 63,340,540 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx765,121,615 - 65,229,838 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0767,324,036 - 67,432,265 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0767,125,283 - 67,233,480 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0770,677,226 - 70,805,255 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl770,697,050 - 70,805,221 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0770,850,447 - 70,978,640 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4767,364,886 - 67,475,880 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1767,442,533 - 67,496,606 (+)NCBI
Celera760,371,508 - 60,479,475 (+)NCBICelera
Cytogenetic Map7q22NCBI
R3HDM2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381257,253,764 - 57,431,141 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1257,253,762 - 57,431,043 (-)EnsemblGRCh38hg38GRCh38
GRCh371257,647,547 - 57,824,826 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361255,933,814 - 55,977,083 (-)NCBINCBI36Build 36hg18NCBI36
Celera1257,301,742 - 57,358,703 (-)NCBICelera
Cytogenetic Map12q13.3NCBI
HuRef1254,686,409 - 54,742,604 (-)NCBIHuRef
CHM1_11257,615,659 - 57,672,355 (-)NCBICHM1_1
T2T-CHM13v2.01257,221,992 - 57,399,417 (-)NCBIT2T-CHM13v2.0
R3hdm2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910127,216,201 - 127,335,253 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10127,216,196 - 127,335,253 (+)EnsemblGRCm39 Ensembl
GRCm3810127,380,332 - 127,499,384 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10127,380,327 - 127,499,384 (+)EnsemblGRCm38mm10GRCm38
MGSCv3710126,827,367 - 126,936,440 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3610126,823,816 - 126,902,329 (+)NCBIMGSCv36mm8
Celera10129,782,901 - 129,890,901 (+)NCBICelera
Cytogenetic Map10D3NCBI
cM Map1074.5NCBI
R3hdm2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554584,981,968 - 5,127,390 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554584,981,967 - 5,127,409 (-)NCBIChiLan1.0ChiLan1.0
R3HDM2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21036,909,060 - 37,086,655 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11236,905,831 - 37,083,424 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01231,494,789 - 31,672,343 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11231,784,823 - 31,923,910 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1231,868,368 - 31,923,910 (+)Ensemblpanpan1.1panPan2
R3HDM2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1101,377,664 - 1,504,008 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl101,370,350 - 1,504,017 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha101,441,640 - 1,607,075 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0101,388,352 - 1,552,863 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl101,380,736 - 1,552,848 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1101,364,935 - 1,530,961 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0101,606,926 - 1,772,486 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0101,731,870 - 1,897,782 (-)NCBIUU_Cfam_GSD_1.0
R3hdm2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494557,298,889 - 57,422,845 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366461,448,362 - 1,494,637 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366461,447,704 - 1,571,363 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
R3HDM2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl522,549,010 - 22,719,054 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1522,558,645 - 22,714,250 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2524,392,777 - 24,541,400 (-)NCBISscrofa10.2Sscrofa10.2susScr3
R3HDM2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11153,165,259 - 53,340,627 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1153,164,779 - 53,224,708 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037192,624,737 - 192,805,448 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
R3hdm2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462480210,522,075 - 10,694,396 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in R3hdm2
338 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:86
Count of miRNA genes:65
Interacting mature miRNAs:80
Transcripts:ENSRNOT00000045964
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)7924703115097879Rat
1643004Pain2Pain QTL 21mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)7946224698011544Rat
1300132Bp182Blood pressure QTL 1823.49arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)71965431784928080Rat
7411569Bw137Body weight QTL 1370.001body mass (VT:0001259)body weight gain (CMO:0000420)72192119566921195Rat
1641885Alcrsp9Alcohol response QTL 9alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)72409960669099606Rat
1549840Bss5Bone structure and strength QTL 59.8femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)72475184169751841Rat
70190Mcs6Mammary carcinoma susceptibility QTL 62.29mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)72673740163902784Rat
10402855Bp379Blood pressure QTL 3790.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)72940968374409683Rat
1300127Srn1Serum renin concentration QTL 13.87blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)72940968384928080Rat
10755453Coatc12Coat color QTL 120coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)73111283276112832Rat
7411605Foco14Food consumption QTL 1424.10.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)73429328279293282Rat
631534Lnnr1Liver neoplastic nodule remodeling QTL 13.850.001liver integrity trait (VT:0010547)liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)73429328279293282Rat
631513Scl7Serum cholesterol level QTL 74.1blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)73796056982960569Rat
61357Bp38Blood pressure QTL 381.60.052arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)741333674119109060Rat
634326Hc3Hypercalciuria QTL 32.1urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)74278731487787314Rat
10053722Scort27Serum corticosterone level QTL 272.410.0083blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)74322875088228750Rat
1358361Sradr5Stress Responsive Adrenal Weight QTL 55.55adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)743747012108555253Rat
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)743747012135012528Rat
1300149Cm6Cardiac mass QTL 64.09heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)743747099102228765Rat
631504Cm27Cardiac mass QTL 273.45heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)744421311118198041Rat
61428Scl3Serum cholesterol level QTL 33.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)74486753389867533Rat
738030Anxrr8Anxiety related response QTL 84.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)74659007091590070Rat
10059605Kidm47Kidney mass QTL 472.910.05kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)74725178365728867Rat
2293696Bmd32Bone mineral density QTL 325.10.0001femur strength trait (VT:0010010)femoral neck polar moment of inertia (CMO:0001670)74765143992651439Rat
2293707Bss32Bone structure and strength QTL 327.640.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)74765143992651439Rat
2300178Bmd54Bone mineral density QTL 545.30.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)74765143992651439Rat
2293644Bmd29Bone mineral density QTL 295.40.0001femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)74765143992651439Rat
2293667Bss42Bone structure and strength QTL 427.250.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)74765143992651439Rat
2293678Bss24Bone structure and strength QTL 246.710.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)74765143992651439Rat
2293685Bmd21Bone mineral density QTL 214.20.0003femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)74765143992651439Rat
1300151Bp181Blood pressure QTL 1813.36arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)753612714103945643Rat
2317035Aia16Adjuvant induced arthritis QTL 162.71joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)759238038104238038Rat
1298528Bp169Blood pressure QTL 1690.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)761074194106074194Rat
1559283Emca4Estrogen-induced mammary cancer QTL 43.7mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)762004452101773158Rat
1576303Ept7Estrogen-induced pituitary tumorigenesis QTL 73.7pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)762004452101773158Rat

Markers in Region
D7Rat230  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2763,294,367 - 63,294,498 (+)MAPPERmRatBN7.2
Rnor_6.0770,759,424 - 70,759,568NCBIRnor6.0
Rnor_5.0770,932,760 - 70,932,904UniSTSRnor5.0
RGSC_v3.4767,428,165 - 67,428,310RGDRGSC3.4
RGSC_v3.4767,428,166 - 67,428,310UniSTSRGSC3.4
RGSC_v3.1767,448,895 - 67,449,040RGD
Celera760,433,366 - 60,433,510UniSTS
FHH x ACI Map733.46RGD
FHH x ACI Map733.46UniSTS
Cytogenetic Map7q22UniSTS
RH141287  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2763,340,216 - 63,340,410 (+)MAPPERmRatBN7.2
Rnor_6.0770,804,898 - 70,805,091NCBIRnor6.0
Rnor_5.0770,978,283 - 70,978,476UniSTSRnor5.0
RGSC_v3.4767,475,537 - 67,475,730UniSTSRGSC3.4
Celera760,479,132 - 60,479,325UniSTS
Cytogenetic Map7q22UniSTS
fc22b03.x1  
Rat AssemblyChrPosition (strand)SourceJBrowse
Celera760,467,826 - 60,468,229UniSTS
Cytogenetic Map7q22UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 38 57 41 19 41 6 9 74 35 39 11 6
Low 5 2 2 2 2
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001130557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006241469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006241472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006241473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006241483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008765413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039079496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039079497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039079498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039079499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039079500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039079501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039079502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039079504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039079505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039079506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039079507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039079508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039079509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039079510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039079511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC122965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC088320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ227506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000045964   ⟹   ENSRNOP00000046983
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl763,232,346 - 63,340,540 (+)Ensembl
Rnor_6.0 Ensembl770,697,050 - 70,805,221 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000090001   ⟹   ENSRNOP00000073015
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl763,232,346 - 63,340,540 (+)Ensembl
Rnor_6.0 Ensembl770,753,101 - 70,804,778 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000097324   ⟹   ENSRNOP00000096190
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl763,232,346 - 63,340,540 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000107753   ⟹   ENSRNOP00000078773
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl763,232,346 - 63,340,540 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000110189   ⟹   ENSRNOP00000078234
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl763,232,346 - 63,340,540 (+)Ensembl
RefSeq Acc Id: NM_001130557   ⟹   NP_001124029
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,117,630 - 65,225,849 (+)NCBI
mRatBN7.2763,232,346 - 63,340,560 (+)NCBI
Rnor_6.0770,697,050 - 70,805,241 (+)NCBI
Rnor_5.0770,850,447 - 70,978,640 (+)NCBI
RGSC_v3.4767,364,886 - 67,475,880 (+)RGD
Celera760,371,508 - 60,479,475 (+)RGD
Sequence:
RefSeq Acc Id: XM_006241472   ⟹   XP_006241534
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,145,534 - 65,225,863 (+)NCBI
mRatBN7.2763,260,255 - 63,340,574 (+)NCBI
Rnor_6.0770,725,305 - 70,805,255 (+)NCBI
Rnor_5.0770,850,447 - 70,978,640 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006241483   ⟹   XP_006241545
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,097,685 - 65,225,863 (+)NCBI
mRatBN7.2763,212,551 - 63,340,574 (+)NCBI
Rnor_6.0770,687,777 - 70,805,255 (+)NCBI
Rnor_5.0770,850,447 - 70,978,640 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008765413   ⟹   XP_008763635
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,097,805 - 65,225,863 (+)NCBI
mRatBN7.2763,212,519 - 63,340,574 (+)NCBI
Rnor_6.0770,677,226 - 70,805,255 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017594931   ⟹   XP_017450420
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,097,685 - 65,225,863 (+)NCBI
mRatBN7.2763,212,550 - 63,340,574 (+)NCBI
Rnor_6.0770,677,304 - 70,805,255 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017594935   ⟹   XP_017450424
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,144,693 - 65,225,863 (+)NCBI
mRatBN7.2763,259,420 - 63,340,574 (+)NCBI
Rnor_6.0770,724,274 - 70,805,255 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017594936   ⟹   XP_017450425
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,131,387 - 65,225,863 (+)NCBI
mRatBN7.2763,288,044 - 63,340,574 (+)NCBI
Rnor_6.0770,687,776 - 70,805,255 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017594940   ⟹   XP_017450429
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,131,387 - 65,225,863 (+)NCBI
mRatBN7.2763,288,044 - 63,340,574 (+)NCBI
Rnor_6.0770,687,776 - 70,805,255 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017594943   ⟹   XP_017450432
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,131,390 - 65,225,863 (+)NCBI
mRatBN7.2763,288,044 - 63,340,574 (+)NCBI
Rnor_6.0770,687,776 - 70,805,255 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039079496   ⟹   XP_038935424
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,097,685 - 65,225,863 (+)NCBI
mRatBN7.2763,212,550 - 63,340,574 (+)NCBI
RefSeq Acc Id: XM_039079497   ⟹   XP_038935425
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,097,685 - 65,225,863 (+)NCBI
mRatBN7.2763,212,550 - 63,340,574 (+)NCBI
RefSeq Acc Id: XM_039079498   ⟹   XP_038935426
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,097,685 - 65,225,863 (+)NCBI
mRatBN7.2763,212,550 - 63,340,574 (+)NCBI
RefSeq Acc Id: XM_039079499   ⟹   XP_038935427
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,097,847 - 65,225,863 (+)NCBI
mRatBN7.2763,212,550 - 63,340,574 (+)NCBI
RefSeq Acc Id: XM_039079500   ⟹   XP_038935428
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,097,847 - 65,225,863 (+)NCBI
mRatBN7.2763,212,550 - 63,340,574 (+)NCBI
RefSeq Acc Id: XM_039079501   ⟹   XP_038935429
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,131,384 - 65,225,863 (+)NCBI
mRatBN7.2763,288,044 - 63,340,574 (+)NCBI
RefSeq Acc Id: XM_039079502   ⟹   XP_038935430
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,131,388 - 65,225,863 (+)NCBI
mRatBN7.2763,288,044 - 63,340,574 (+)NCBI
RefSeq Acc Id: XM_039079504   ⟹   XP_038935432
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,131,385 - 65,225,863 (+)NCBI
mRatBN7.2763,288,044 - 63,340,574 (+)NCBI
RefSeq Acc Id: XM_039079505   ⟹   XP_038935433
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,131,389 - 65,225,863 (+)NCBI
mRatBN7.2763,288,044 - 63,340,574 (+)NCBI
RefSeq Acc Id: XM_039079506   ⟹   XP_038935434
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,131,383 - 65,225,863 (+)NCBI
mRatBN7.2763,288,044 - 63,340,574 (+)NCBI
RefSeq Acc Id: XM_039079507   ⟹   XP_038935435
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,131,387 - 65,225,863 (+)NCBI
mRatBN7.2763,288,044 - 63,340,574 (+)NCBI
RefSeq Acc Id: XM_039079508   ⟹   XP_038935436
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,131,388 - 65,225,863 (+)NCBI
mRatBN7.2763,288,044 - 63,340,574 (+)NCBI
RefSeq Acc Id: XM_039079509   ⟹   XP_038935437
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,173,325 - 65,225,863 (+)NCBI
mRatBN7.2763,288,044 - 63,340,574 (+)NCBI
RefSeq Acc Id: XM_039079510   ⟹   XP_038935438
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,188,020 - 65,225,863 (+)NCBI
mRatBN7.2763,302,725 - 63,340,574 (+)NCBI
RefSeq Acc Id: XM_039079511   ⟹   XP_038935439
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,131,367 - 65,221,890 (+)NCBI
mRatBN7.2763,288,044 - 63,335,576 (+)NCBI
RefSeq Acc Id: XM_063263806   ⟹   XP_063119876
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,131,380 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263807   ⟹   XP_063119877
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,097,685 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263808   ⟹   XP_063119878
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,097,685 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263809   ⟹   XP_063119879
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,097,685 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263810   ⟹   XP_063119880
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,097,685 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263811   ⟹   XP_063119881
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,097,847 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263812   ⟹   XP_063119882
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,131,365 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263813   ⟹   XP_063119883
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,131,381 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263814   ⟹   XP_063119884
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,131,373 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263815   ⟹   XP_063119885
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,097,685 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263816   ⟹   XP_063119886
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,144,694 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263817   ⟹   XP_063119887
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,097,805 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263818   ⟹   XP_063119888
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,131,386 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263819   ⟹   XP_063119889
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,097,685 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263820   ⟹   XP_063119890
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,097,685 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263821   ⟹   XP_063119891
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,097,718 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263822   ⟹   XP_063119892
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,131,386 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263823   ⟹   XP_063119893
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,131,387 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263824   ⟹   XP_063119894
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,097,685 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263825   ⟹   XP_063119895
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,131,367 - 65,221,890 (+)NCBI
RefSeq Acc Id: XM_063263826   ⟹   XP_063119896
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,193,687 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263827   ⟹   XP_063119897
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,193,838 - 65,225,863 (+)NCBI
RefSeq Acc Id: XM_063263828   ⟹   XP_063119898
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8765,193,687 - 65,225,863 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001124029 (Get FASTA)   NCBI Sequence Viewer  
  XP_006241534 (Get FASTA)   NCBI Sequence Viewer  
  XP_006241545 (Get FASTA)   NCBI Sequence Viewer  
  XP_008763635 (Get FASTA)   NCBI Sequence Viewer  
  XP_017450420 (Get FASTA)   NCBI Sequence Viewer  
  XP_017450424 (Get FASTA)   NCBI Sequence Viewer  
  XP_017450425 (Get FASTA)   NCBI Sequence Viewer  
  XP_017450429 (Get FASTA)   NCBI Sequence Viewer  
  XP_017450432 (Get FASTA)   NCBI Sequence Viewer  
  XP_038935424 (Get FASTA)   NCBI Sequence Viewer  
  XP_038935425 (Get FASTA)   NCBI Sequence Viewer  
  XP_038935426 (Get FASTA)   NCBI Sequence Viewer  
  XP_038935427 (Get FASTA)   NCBI Sequence Viewer  
  XP_038935428 (Get FASTA)   NCBI Sequence Viewer  
  XP_038935429 (Get FASTA)   NCBI Sequence Viewer  
  XP_038935430 (Get FASTA)   NCBI Sequence Viewer  
  XP_038935432 (Get FASTA)   NCBI Sequence Viewer  
  XP_038935433 (Get FASTA)   NCBI Sequence Viewer  
  XP_038935434 (Get FASTA)   NCBI Sequence Viewer  
  XP_038935435 (Get FASTA)   NCBI Sequence Viewer  
  XP_038935436 (Get FASTA)   NCBI Sequence Viewer  
  XP_038935437 (Get FASTA)   NCBI Sequence Viewer  
  XP_038935438 (Get FASTA)   NCBI Sequence Viewer  
  XP_038935439 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119876 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119877 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119878 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119879 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119880 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119881 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119882 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119883 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119884 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119885 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119886 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119887 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119888 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119889 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119890 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119891 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119892 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119893 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119894 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119895 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119896 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119897 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119898 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH88320 (Get FASTA)   NCBI Sequence Viewer  
  EDM16466 (Get FASTA)   NCBI Sequence Viewer  
  EDM16467 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000046983.3
  ENSRNOP00000073015.1
  ENSRNOP00000078234.1
  ENSRNOP00000078773.1
  ENSRNOP00000096190.1
RefSeq Acc Id: NP_001124029   ⟸   NM_001130557
- UniProtKB: A6HQV5 (UniProtKB/TrEMBL),   A0A8I5ZKH5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006241545   ⟸   XM_006241483
- Peptide Label: isoform X21
- UniProtKB: A6HQV5 (UniProtKB/TrEMBL),   A0A8I5ZKH5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006241534   ⟸   XM_006241472
- Peptide Label: isoform X3
- UniProtKB: A0A0G2K4E8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008763635   ⟸   XM_008765413
- Peptide Label: isoform X3
- UniProtKB: A0A0G2K4E8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017450420   ⟸   XM_017594931
- Peptide Label: isoform X3
- UniProtKB: A0A0G2K4E8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017450425   ⟸   XM_017594936
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017450429   ⟸   XM_017594940
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_017450432   ⟸   XM_017594943
- Peptide Label: isoform X20
- Sequence:
RefSeq Acc Id: XP_017450424   ⟸   XM_017594935
- Peptide Label: isoform X3
- UniProtKB: A0A0G2K4E8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000046983   ⟸   ENSRNOT00000045964
RefSeq Acc Id: ENSRNOP00000073015   ⟸   ENSRNOT00000090001
RefSeq Acc Id: XP_038935426   ⟸   XM_039079498
- Peptide Label: isoform X3
- UniProtKB: A0A0G2K4E8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038935424   ⟸   XM_039079496
- Peptide Label: isoform X3
- UniProtKB: A0A0G2K4E8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038935425   ⟸   XM_039079497
- Peptide Label: isoform X3
- UniProtKB: A0A0G2K4E8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038935427   ⟸   XM_039079499
- Peptide Label: isoform X3
- UniProtKB: A0A0G2K4E8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038935428   ⟸   XM_039079500
- Peptide Label: isoform X3
- UniProtKB: A0A0G2K4E8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038935432   ⟸   XM_039079504
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038935433   ⟸   XM_039079505
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038935429   ⟸   XM_039079501
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038935430   ⟸   XM_039079502
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038935435   ⟸   XM_039079507
- Peptide Label: isoform X14
RefSeq Acc Id: XP_038935434   ⟸   XM_039079506
- Peptide Label: isoform X13
RefSeq Acc Id: XP_038935436   ⟸   XM_039079508
- Peptide Label: isoform X16
RefSeq Acc Id: XP_038935437   ⟸   XM_039079509
- Peptide Label: isoform X25
- UniProtKB: A0A8I5ZLX2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038935439   ⟸   XM_039079511
- Peptide Label: isoform X28
RefSeq Acc Id: XP_038935438   ⟸   XM_039079510
- Peptide Label: isoform X27
RefSeq Acc Id: ENSRNOP00000078234   ⟸   ENSRNOT00000110189
RefSeq Acc Id: ENSRNOP00000078773   ⟸   ENSRNOT00000107753
RefSeq Acc Id: ENSRNOP00000096190   ⟸   ENSRNOT00000097324
RefSeq Acc Id: XP_063119880   ⟸   XM_063263810
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063119877   ⟸   XM_063263807
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063119879   ⟸   XM_063263809
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063119878   ⟸   XM_063263808
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063119889   ⟸   XM_063263819
- Peptide Label: isoform X18
RefSeq Acc Id: XP_063119890   ⟸   XM_063263820
- Peptide Label: isoform X19
RefSeq Acc Id: XP_063119894   ⟸   XM_063263824
- Peptide Label: isoform X24
RefSeq Acc Id: XP_063119885   ⟸   XM_063263815
- Peptide Label: isoform X12
RefSeq Acc Id: XP_063119891   ⟸   XM_063263821
- Peptide Label: isoform X19
RefSeq Acc Id: XP_063119887   ⟸   XM_063263817
- Peptide Label: isoform X15
- UniProtKB: G3V9G7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119881   ⟸   XM_063263811
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063119882   ⟸   XM_063263812
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063119895   ⟸   XM_063263825
- Peptide Label: isoform X26
RefSeq Acc Id: XP_063119884   ⟸   XM_063263814
- Peptide Label: isoform X10
RefSeq Acc Id: XP_063119876   ⟸   XM_063263806
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063119883   ⟸   XM_063263813
- Peptide Label: isoform X7
RefSeq Acc Id: XP_063119892   ⟸   XM_063263822
- Peptide Label: isoform X22
RefSeq Acc Id: XP_063119888   ⟸   XM_063263818
- Peptide Label: isoform X17
RefSeq Acc Id: XP_063119893   ⟸   XM_063263823
- Peptide Label: isoform X23
RefSeq Acc Id: XP_063119886   ⟸   XM_063263816
- Peptide Label: isoform X12
RefSeq Acc Id: XP_063119896   ⟸   XM_063263826
- Peptide Label: isoform X29
RefSeq Acc Id: XP_063119898   ⟸   XM_063263828
- Peptide Label: isoform X30
RefSeq Acc Id: XP_063119897   ⟸   XM_063263827
- Peptide Label: isoform X29
Protein Domains
R3H   SUZ

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K4E8-F1-model_v2 AlphaFold A0A0G2K4E8 1-1045 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1310066 AgrOrtholog
BioCyc Gene G2FUF-33743 BioCyc
Ensembl Genes ENSRNOG00000007801 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000045964.5 UniProtKB/TrEMBL
  ENSRNOT00000090001.2 UniProtKB/TrEMBL
  ENSRNOT00000097324.1 UniProtKB/TrEMBL
  ENSRNOT00000107753.1 UniProtKB/TrEMBL
  ENSRNOT00000110189.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.1370.50 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7325813 IMAGE-MGC_LOAD
InterPro R3H_dom_sf UniProtKB/TrEMBL
  R3H_ss-bd UniProtKB/TrEMBL
  SUZ UniProtKB/TrEMBL
KEGG Report rno:362894 UniProtKB/TrEMBL
MGC_CLONE MGC:109558 IMAGE-MGC_LOAD
NCBI Gene 362894 ENTREZGENE
PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN UniProtKB/TrEMBL
  R3H DOMAIN-CONTAINING PROTEIN 2 UniProtKB/TrEMBL
Pfam R3H UniProtKB/TrEMBL
  SUZ UniProtKB/TrEMBL
PhenoGen R3hdm2 PhenoGen
PROSITE R3H UniProtKB/TrEMBL
  SUZ UniProtKB/TrEMBL
RatGTEx ENSRNOG00000007801 RatGTEx
SMART R3H UniProtKB/TrEMBL
Superfamily-SCOP SSF82708 UniProtKB/TrEMBL
UniProt A0A0G2K4E8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZKH5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZLX2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ASW9_RAT UniProtKB/TrEMBL
  A6HQV5 ENTREZGENE, UniProtKB/TrEMBL
  G3V9G7 ENTREZGENE, UniProtKB/TrEMBL
  Q5M814_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-02-27 R3hdm2  R3H domain containing 2  RGD1310066  similar to mKIAA1002 protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 RGD1310066  similar to mKIAA1002 protein  RGD1310066_predicted  similar to mKIAA1002 protein (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-20 RGD1310066_predicted  similar to mKIAA1002 protein (predicted)  LOC362894_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC362894_predicted  similar to mKIAA1002 protein (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL