Upk1a (uroplakin 1A) - Rat Genome Database

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Gene: Upk1a (uroplakin 1A) Rattus norvegicus
Analyze
Symbol: Upk1a
Name: uroplakin 1A
RGD ID: 1309849
Description: Predicted to be involved in epithelial cell differentiation. Predicted to be located in apical plasma membrane and cell surface. Predicted to be active in apical plasma membrane urothelial plaque. Orthologous to human UPK1A (uroplakin 1A); INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Cox6b; cytochrome c oxidase, subunit VIb; LOC365227; uroplakin 1a variant X2; uroplakin-1a
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8194,987,110 - 94,998,083 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl194,987,108 - 94,997,787 (-)EnsemblGRCr8
mRatBN7.2185,859,672 - 85,870,147 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl185,859,671 - 85,870,354 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx191,276,296 - 91,286,720 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0199,742,465 - 99,752,893 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0193,034,580 - 93,045,010 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0189,060,581 - 89,071,579 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl189,060,581 - 89,068,348 (-)Ensemblrn6Rnor6.0
Rnor_5.0190,215,600 - 90,226,385 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4185,654,294 - 85,662,252 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera180,231,387 - 80,239,144 (-)NCBICelera
RGSC_v3.1185,732,415 - 85,743,346 (-)NCBI
Cytogenetic Map1q21NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8175808   PMID:10514386   PMID:11739641   PMID:19056867   PMID:21301865   PMID:22323295   PMID:23376485   PMID:28228557  


Genomics

Comparative Map Data
Upk1a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8194,987,110 - 94,998,083 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl194,987,108 - 94,997,787 (-)EnsemblGRCr8
mRatBN7.2185,859,672 - 85,870,147 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl185,859,671 - 85,870,354 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx191,276,296 - 91,286,720 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0199,742,465 - 99,752,893 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0193,034,580 - 93,045,010 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0189,060,581 - 89,071,579 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl189,060,581 - 89,068,348 (-)Ensemblrn6Rnor6.0
Rnor_5.0190,215,600 - 90,226,385 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4185,654,294 - 85,662,252 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera180,231,387 - 80,239,144 (-)NCBICelera
RGSC_v3.1185,732,415 - 85,743,346 (-)NCBI
Cytogenetic Map1q21NCBI
UPK1A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381935,666,517 - 35,678,481 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1935,666,517 - 35,678,481 (+)Ensemblhg38GRCh38
GRCh371936,157,419 - 36,169,383 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361940,849,555 - 40,861,207 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341940,849,554 - 40,861,207NCBI
Celera1932,871,189 - 32,882,842 (+)NCBICelera
Cytogenetic Map19q13.12NCBI
HuRef1932,662,926 - 32,674,516 (+)NCBIHuRef
CHM1_11936,158,949 - 36,170,840 (+)NCBICHM1_1
T2T-CHM13v2.01938,211,498 - 38,223,458 (+)NCBIT2T-CHM13v2.0
Upk1a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39730,302,517 - 30,312,159 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl730,302,517 - 30,312,272 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38730,603,092 - 30,612,734 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl730,603,092 - 30,612,847 (-)Ensemblmm10GRCm38
MGSCv37731,388,111 - 31,397,753 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36730,311,852 - 30,321,494 (-)NCBIMGSCv36mm8
Celera725,194,627 - 25,204,370 (-)NCBICelera
Cytogenetic Map7B1NCBI
cM Map718.78NCBI
Upk1a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554682,868,806 - 2,877,605 (-)Ensembl
ChiLan1.0NW_0049554682,868,839 - 2,878,518 (-)NCBIChiLan1.0ChiLan1.0
UPK1A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22041,661,750 - 41,674,544 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11943,645,856 - 43,660,361 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01932,596,034 - 32,608,228 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11941,331,732 - 41,343,396 (+)NCBIPanPan1.1PanPan1.1panPan2
UPK1A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11116,937,895 - 116,947,457 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1116,938,647 - 116,947,104 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1116,343,866 - 116,352,668 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01117,541,809 - 117,550,650 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1117,542,278 - 117,551,556 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11117,104,877 - 117,113,706 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01116,728,766 - 116,737,612 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01117,784,207 - 117,793,049 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Upk1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934911,003,275 - 11,011,971 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936570634,067 - 642,605 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936570633,933 - 641,429 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UPK1A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl645,104,021 - 45,114,122 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1645,105,118 - 45,113,631 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2640,561,492 - 40,570,005 (+)NCBISscrofa10.2Sscrofa10.2susScr3
UPK1A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1630,587,684 - 30,600,729 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl630,588,394 - 30,600,780 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660738,376,182 - 8,389,623 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Upk1a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247949,981,755 - 9,991,496 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247949,981,740 - 9,991,512 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Upk1a
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v12165,392,964 - 165,403,742 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Upk1a
16 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:213
Count of miRNA genes:138
Interacting mature miRNAs:154
Transcripts:ENSRNOT00000033621
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578649Bmd8Bone mineral density QTL 84.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)151940904101229020Rat
1582234Gluco18Glucose level QTL 183.40.0003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)187889942132889942Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)139728272132889942Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)151941022208479811Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)151940904168768703Rat
2300324Fetw1Fetal weight QTL 112.10.005fetal growth trait (VT:0004201)fetal body weight (CMO:0002080)192963855109494029Rat
1331800Scl25Serum cholesterol level QTL 253.013blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)187785026142582336Rat
7421628Bp361Blood pressure QTL 3610.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183019780128019780Rat
631495Bp96Blood pressure QTL 964.52arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)166404680111404680Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134184556172281316Rat
631512Scl6Serum cholesterol level QTL 69.6blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)18126986099645535Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)166009857160501508Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134565911208798288Rat
631519Pia11Pristane induced arthritis QTL 115.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)193903998191260518Rat
1302788Scl19Serum cholesterol QTL 194.60.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)166400974132889942Rat
1549903Bp267Blood pressure QTL 267arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)184107164115183752Rat
2313083Bmd74Bone mineral density QTL 7440.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)191302413136302413Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)151511344153680016Rat
61342Bp27Blood pressure QTL 273.40.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16540563796805205Rat
1358192Ept13Estrogen-induced pituitary tumorigenesis QTL 133.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)186622262131622262Rat
6903308Scl36Serum cholesterol QTL 3620.0125blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)158769992103769992Rat
2300164Bmd44Bone mineral density QTL 445.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)166077886111077886Rat
738022Anxrr13Anxiety related response QTL 134.60.00039locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of, or within a discrete space in an open field apparatus (CMO:0001514)192683681137683681Rat
152025249Scl82Serum cholesterol level QTL 824.77blood cholesterol amount (VT:0000180)152891222109116986Rat
10054135Gmadr2Adrenal mass QTL 21.970.0129adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)186993904131993904Rat
7411712Strs4Sensitivity to stroke QTL 48.7cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)187558587132558587Rat
1331749Hrtrt11Heart rate QTL 112.973heart pumping trait (VT:2000009)heart rate (CMO:0000002)192683681137683681Rat

Markers in Region
BM391788  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2185,868,874 - 85,869,049 (+)MAPPERmRatBN7.2
Rnor_6.0189,069,782 - 89,069,956NCBIRnor6.0
Rnor_5.0190,224,632 - 90,224,806UniSTSRnor5.0
RGSC_v3.4185,663,686 - 85,663,860UniSTSRGSC3.4
Celera180,240,578 - 80,240,752UniSTS
RH 3.4 Map1843.0UniSTS
Cytogenetic Map1q21UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 3 58 119 84 87 56 76 56 6 302 151 1 106 76 89 31 7 7

Sequence


Ensembl Acc Id: ENSRNOT00000033621   ⟹   ENSRNOP00000036268
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl194,987,108 - 94,995,959 (-)Ensembl
mRatBN7.2 Ensembl185,859,671 - 85,868,530 (-)Ensembl
Rnor_6.0 Ensembl189,060,581 - 89,068,348 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000105462   ⟹   ENSRNOP00000097413
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl194,987,108 - 94,997,787 (-)Ensembl
mRatBN7.2 Ensembl185,859,672 - 85,870,354 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000115298   ⟹   ENSRNOP00000083363
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl194,987,108 - 94,997,787 (-)Ensembl
mRatBN7.2 Ensembl185,859,672 - 85,870,354 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000141071   ⟹   ENSRNOP00000103035
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl194,987,121 - 94,997,787 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000157664   ⟹   ENSRNOP00000105414
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl194,988,417 - 94,997,787 (-)Ensembl
RefSeq Acc Id: NM_001108911   ⟹   NP_001102381
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8194,987,113 - 94,997,580 (-)NCBI
mRatBN7.2185,859,677 - 85,870,147 (-)NCBI
Rnor_6.0189,060,581 - 89,068,348 (-)NCBI
Rnor_5.0190,215,600 - 90,226,385 (-)NCBI
RGSC_v3.4185,654,294 - 85,662,252 (-)RGD
Celera180,231,387 - 80,239,144 (-)RGD
Sequence:
RefSeq Acc Id: XM_039084978   ⟹   XP_038940906
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8194,987,110 - 94,997,005 (-)NCBI
mRatBN7.2185,859,672 - 85,867,713 (-)NCBI
RefSeq Acc Id: XM_063269116   ⟹   XP_063125186
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8194,987,110 - 94,997,005 (-)NCBI
RefSeq Acc Id: XM_063269118   ⟹   XP_063125188
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8194,987,110 - 94,998,083 (-)NCBI
RefSeq Acc Id: XM_063269121   ⟹   XP_063125191
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8194,987,110 - 94,997,907 (-)NCBI
RefSeq Acc Id: XM_063269122   ⟹   XP_063125192
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8194,987,110 - 94,996,994 (-)NCBI
RefSeq Acc Id: XM_063269124   ⟹   XP_063125194
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8194,987,110 - 94,998,083 (-)NCBI
RefSeq Acc Id: NP_001102381   ⟸   NM_001108911
- UniProtKB: A0A1L2C162 (UniProtKB/TrEMBL),   A0A8I5ZVR2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000036268   ⟸   ENSRNOT00000033621
RefSeq Acc Id: XP_038940906   ⟸   XM_039084978
- Peptide Label: isoform X5
- UniProtKB: D3ZDW5 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000097413   ⟸   ENSRNOT00000105462
Ensembl Acc Id: ENSRNOP00000083363   ⟸   ENSRNOT00000115298
RefSeq Acc Id: XP_063125194   ⟸   XM_063269124
- Peptide Label: isoform X4
- UniProtKB: A0A1L2C162 (UniProtKB/TrEMBL),   A0A8I5ZVR2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063125188   ⟸   XM_063269118
- Peptide Label: isoform X2
- UniProtKB: D3ZDW5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063125191   ⟸   XM_063269121
- Peptide Label: isoform X2
- UniProtKB: D3ZDW5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063125186   ⟸   XM_063269116
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063125192   ⟸   XM_063269122
- Peptide Label: isoform X3
- UniProtKB: D3ZDW5 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000105414   ⟸   ENSRNOT00000157664
Ensembl Acc Id: ENSRNOP00000103035   ⟸   ENSRNOT00000141071

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309849 AgrOrtholog
BioCyc Gene G2FUF-60090 BioCyc
Ensembl Genes ENSRNOG00000024331 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000033621.6 UniProtKB/TrEMBL
  ENSRNOT00000105462 ENTREZGENE
  ENSRNOT00000105462.2 UniProtKB/TrEMBL
  ENSRNOT00000115298.2 UniProtKB/TrEMBL
  ENSRNOT00000141071 ENTREZGENE
  ENSRNOT00000141071.1 UniProtKB/TrEMBL
  ENSRNOT00000157664.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.1450.10 UniProtKB/TrEMBL
InterPro Tetraspanin UniProtKB/TrEMBL
  Tetraspanin UniProtKB/TrEMBL
  Tetraspanin_EC2 UniProtKB/TrEMBL
KEGG Report rno:365227 UniProtKB/TrEMBL
NCBI Gene 365227 ENTREZGENE
PANTHER PTHR19282 UniProtKB/TrEMBL
  PTHR19282:SF25 UniProtKB/TrEMBL
  TESTIS-SPECIFIC EXPRESSED PROTEIN 55 UniProtKB/TrEMBL
  UROPLAKIN-1B UniProtKB/TrEMBL
Pfam Tetraspannin UniProtKB/TrEMBL
PhenoGen Upk1a PhenoGen
PIRSF Tetraspanin UniProtKB/TrEMBL
PRINTS TMFOUR UniProtKB/TrEMBL
RatGTEx ENSRNOG00000024331 RatGTEx
Superfamily-SCOP Tetraspanin UniProtKB/TrEMBL
UniProt A0A1L2C162 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZVR2 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0L654_RAT UniProtKB/TrEMBL
  A0ABK0LE96_RAT UniProtKB/TrEMBL
  A6JA03_RAT UniProtKB/TrEMBL
  D3ZDW5 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-03-03 Upk1a  uroplakin 1A  Cox6b_predicted  cytochrome c oxidase, subunit VIb (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-12 Cox6b_predicted  cytochrome c oxidase, subunit VIb (predicted)      Symbol and Name status set to approved 70820 APPROVED