Caps2 (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 7 | 49,467,320 - 49,525,465 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 7 | 49,464,885 - 49,525,465 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | 7 | 47,580,636 - 47,641,598 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 47,581,137 - 47,639,229 (+) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 7 | 49,483,391 - 49,547,407 (+) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 51,686,478 - 51,750,497 (+) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 51,464,306 - 51,528,323 (+) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 54,858,841 - 54,917,406 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 54,859,104 - 54,917,323 (+) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 54,878,735 - 54,939,800 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 7 | 51,180,547 - 51,239,062 (+) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 7 | 44,376,718 - 44,434,527 (+) | NCBI | | Celera | | | RGSC_v3.1 | 7 | 51,212,317 - 51,258,552 (+) | NCBI | | | | | Cytogenetic Map | 7 | q22 | NCBI | | | | |
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CAPS2 (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 12 | 75,275,979 - 75,390,901 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 75,275,979 - 75,390,950 (-) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 12 | 75,669,759 - 75,784,681 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 73,957,276 - 74,070,969 (-) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 12 | 73,957,275 - 74,070,969 | NCBI | | | | | Celera | 12 | 75,337,122 - 75,391,273 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | q21.1-q21.2 | NCBI | | | | | HuRef | 12 | 72,719,309 - 72,773,367 (-) | NCBI | | HuRef | | | CHM1_1 | 12 | 75,635,051 - 75,689,107 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 75,250,589 - 75,365,485 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Caps2 (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 10 | 111,999,254 - 112,052,466 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 111,999,526 - 112,052,460 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 10 | 112,163,349 - 112,216,561 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 112,163,621 - 112,216,555 (+) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 10 | 111,602,732 - 111,653,611 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 10 | 111,567,731 - 111,620,665 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 10 | 114,112,594 - 114,155,779 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | D2 | NCBI | | | | | cM Map | 10 | 60.18 | NCBI | | | | |
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Caps2 (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955405 | 14,655,801 - 14,674,199 (-) | Ensembl | | | | | ChiLan1.0 | NW_004955405 | 14,658,335 - 14,761,708 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CAPS2 (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 10 | 83,318,262 - 83,433,266 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 83,314,654 - 83,429,693 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 72,802,285 - 72,917,195 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 75,655,635 - 75,708,879 (-) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 75,654,845 - 75,708,879 (-) | Ensembl | | | panPan2 | panpan1.1 |
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CAPS2 (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 10 | 15,843,765 - 15,924,473 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 10 | 15,843,975 - 15,888,355 (-) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 10 | 15,788,378 - 15,871,219 (-) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 10 | 16,033,162 - 16,116,044 (-) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 10 | 16,031,573 - 16,078,339 (-) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 10 | 15,842,740 - 15,925,592 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 10 | 16,096,976 - 16,179,794 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 10 | 16,221,854 - 16,304,848 (-) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Caps2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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CAPS2 (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 5 | 38,573,320 - 38,625,070 (-) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 5 | 38,577,308 - 38,625,878 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 5 | 42,097,902 - 42,118,739 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CAPS2 (Chlorocebus sabaeus - green monkey) |
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Caps2 (Heterocephalus glaber - naked mole-rat) |
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Caps2 (Rattus rattus - black rat) |
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