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Gene: Resf1 (retroelement silencing factor 1) Rattus norvegicus

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Symbol:

Resf1

Name:

retroelement silencing factor 1

RGD ID:

1309621

Description:

Predicted to enable histone methyltransferase binding activity. Predicted to be involved in transposable element silencing by heterochromatin formation. Predicted to act upstream of or within response to bacterium. Predicted to be active in nucleus. Orthologous to human RESF1 (retroelement silencing factor 1); INTERACTS WITH 1,3-dinitrobenzene; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC316982; RGD1309621; similar to hypothetical protein FLJ10652; uncharacterized protein KIAA1551 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RESF1 (retroelement silencing factor 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Resf1 (retroelement silencing factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Resf1 (retroelement silencing factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RESF1 (retroelement silencing factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RESF1 (retroelement silencing factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Resf1 (retroelement silencing factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RESF1 (retroelement silencing factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RESF1 (retroelement silencing factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Resf1 (retroelement silencing factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Resf1 (retroelement silencing factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Resf1 (retroelement silencing factor 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	RESF1 (retroelement silencing factor 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	resf1	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	resf1	Alliance	DIOPT (Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	184,057,165 - 184,093,374 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	184,057,010 - 184,098,429 (+)	Ensembl				GRCr8
mRatBN7.2	4	182,325,913 - 182,362,054 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	182,335,454 - 182,362,054 (+)	Ensembl				mRatBN7.2
Rnor_6.0	4	183,879,177 - 183,905,807 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	183,896,303 - 183,905,297 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	247,998,508 - 248,024,196 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	186,780,191 - 186,789,644 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	170,801,085 - 170,827,810 (+)	NCBI		Celera
RGSC_v3.1	4	187,025,314 - 187,029,613 (+)	NCBI
Cytogenetic Map	4	q44	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,3-dinitrobenzene (EXP)

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-palmitoylglycerol (ISO)

all-trans-retinoic acid (EXP,ISO)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

azoxystrobin (EXP)

bisphenol A (EXP,ISO)

caffeine (ISO)

chloroprene (EXP)

chlorpyrifos (EXP)

cisplatin (ISO)

copper atom (ISO)

copper(0) (ISO)

copper(II) sulfate (ISO)

crocidolite asbestos (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

doxorubicin (ISO)

endosulfan (EXP)

entinostat (ISO)

epoxiconazole (ISO)

formaldehyde (ISO)

FR900359 (ISO)

fulvestrant (ISO)

geldanamycin (ISO)

glyphosate (EXP)

hydrogen cyanide (ISO)

imidacloprid (EXP)

indometacin (ISO)

nickel atom (ISO)

nickel sulfate (ISO)

paracetamol (EXP)

perfluorooctane-1-sulfonic acid (ISO)

potassium cyanide (ISO)

quercetin (ISO)

tetrachloromethane (ISO)

thiabendazole (EXP)

thioacetamide (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

triptonide (ISO)

tris(2-butoxyethyl) phosphate (ISO)

urethane (ISO)

valproic acid (EXP,ISO)

vinclozolin (EXP)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

response to bacterium (ISO)

transposable element silencing by heterochromatin formation (ISO)

Cellular Component

nucleolus (ISO)

nucleus (IBA,ISO)

Molecular Function

histone methyltransferase binding (IBA,ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:23012479	PMID:29728365

Genomics

Comparative Map Data

Resf1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	184,057,165 - 184,093,374 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	184,057,010 - 184,098,429 (+)	Ensembl				GRCr8
mRatBN7.2	4	182,325,913 - 182,362,054 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	182,335,454 - 182,362,054 (+)	Ensembl				mRatBN7.2
Rnor_6.0	4	183,879,177 - 183,905,807 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	183,896,303 - 183,905,297 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	247,998,508 - 248,024,196 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	186,780,191 - 186,789,644 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	170,801,085 - 170,827,810 (+)	NCBI		Celera
RGSC_v3.1	4	187,025,314 - 187,029,613 (+)	NCBI
Cytogenetic Map	4	q44	NCBI

RESF1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	31,959,415 - 31,993,107 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	31,959,370 - 31,993,114 (+)	Ensembl			hg38	GRCh38
GRCh37	12	32,112,349 - 32,146,041 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	32,003,620 - 32,037,308 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	12	11,934,148 - 11,967,834 (+)	NCBI		Celera
Cytogenetic Map	12	p11.21	NCBI
HuRef	12	31,863,530 - 31,897,223 (+)	NCBI		HuRef
CHM1_1	12	32,078,356 - 32,112,040 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	31,835,397 - 31,869,084 (+)	NCBI		T2T-CHM13v2.0

Resf1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	149,210,907 - 149,237,161 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	149,210,912 - 149,237,161 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	6	149,309,409 - 149,335,663 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	149,309,414 - 149,335,663 (+)	Ensembl			mm10	GRCm38
MGSCv37	6	149,257,936 - 149,284,185 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	6	149,266,601 - 149,292,826 (+)	NCBI		MGSCv36	mm8
Celera	6	152,343,904 - 152,370,153 (+)	NCBI		Celera
Cytogenetic Map	6	G3	NCBI
cM Map	6	78.89	NCBI

Resf1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955505	3,684,848 - 3,709,624 (-)	NCBI	ChiLan1.0	ChiLan1.0

RESF1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	64,767,476 - 64,800,905 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	64,763,870 - 64,798,167 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	54,238,276 - 54,272,288 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	56,829,272 - 56,863,360 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	56,829,272 - 56,863,359 (-)	Ensembl			panPan2	panpan1.1

RESF1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	16,829,611 - 16,856,960 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	16,829,968 - 16,839,166 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	29,560,294 - 29,589,056 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	17,009,033 - 17,037,820 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	17,009,052 - 17,037,829 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	16,819,667 - 16,848,433 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	16,852,789 - 16,881,527 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	29,714,347 - 29,743,126 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Resf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	77,414,879 - 77,441,069 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936607	4,247,824 - 4,274,410 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RESF1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	42,261,304 - 42,299,514 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	5	42,263,560 - 42,299,596 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	45,546,617 - 45,582,617 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RESF1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	31,402,505 - 31,436,527 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	31,402,760 - 31,436,533 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666069	3,503,661 - 3,537,420 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Resf1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624778	4,192,168 - 4,224,027 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Resf1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	6	6,986,830 - 7,013,659 (+)	NCBI		Rrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	137
Count of miRNA genes:	115
Interacting mature miRNAs:	118
Transcripts:	ENSRNOT00000055437
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
6478754	Anxrr43	Anxiety related response QTL 43		0.14035	locomotor behavior trait (VT:0001392)	distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)	4	146370897	184426481	Rat
6478720	Alc23	Alcohol consumption QTL 23		0.00509	drinking behavior trait (VT:0001422)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	155834926	184426481	Rat
6478785	Anxrr53	Anxiety related response QTL 53		0.01397	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
6478693	Anxrr32	Anxiety related response QTL 32		0.00092	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)	4	146370897	184426481	Rat
6478757	Anxrr44	Anxiety related response QTL 44		0.01087	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
6478728	Anxrr36	Anxiety related response QTL 36		0.01061	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
738016	Alc16	Alcohol consumption QTL 16	3.6	0.00015	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	60916264	184426481	Rat
6478700	Anxrr33	Anxiety related response QTL 33		0.00896	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	146370897	184426481	Rat
1298524	Oia8	Oil induced arthritis QTL 8			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	140059299	184426481	Rat
6478733	Anxrr37	Anxiety related response QTL 37		0.00095	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
10053718	Scort25	Serum corticosterone level QTL 25	2.15	0.0097	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	157292416	184426481	Rat
738009	Sach4	Saccharine consumption QTL 4	4.9	0.000016	consumption behavior trait (VT:0002069)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	4	60916264	184426481	Rat
61362	Oia2	Oil induced arthritis QTL 2		0.001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	140059299	184426481	Rat
6478737	Anxrr38	Anxiety related response QTL 38		0.00159	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
2293659	Bmd35	Bone mineral density QTL 35	4.5	0.0001	femur strength trait (VT:0010010)	femoral neck ultimate force (CMO:0001703)	4	160623982	184426481	Rat
10401796	Kidm48	Kidney mass QTL 48			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	4	147299608	184426481	Rat
6478718	Anxrr34	Anxiety related response QTL 34		0.00896	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	146370897	184426481	Rat
6478782	Anxrr52	Anxiety related response QTL 52		0.02091	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
6478748	Anxrr42	Anxiety related response QTL 42		0.28008	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	146370897	184426481	Rat

Markers in Region

BE628502

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	182,353,533 - 182,353,654 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	183,897,294 - 183,897,414	NCBI	Rnor6.0
Rnor_5.0	4	248,015,678 - 248,015,798	UniSTS	Rnor5.0
RGSC_v3.4	4	186,781,131 - 186,781,251	UniSTS	RGSC3.4
Celera	4	170,819,297 - 170,819,417	UniSTS
Cytogenetic Map	4	q44	UniSTS

RH143657

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	182,361,625 - 182,361,731 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	183,905,384 - 183,905,489	NCBI	Rnor6.0
Rnor_5.0	4	248,023,768 - 248,023,873	UniSTS	Rnor5.0
RGSC_v3.4	4	186,789,221 - 186,789,326	UniSTS	RGSC3.4
Celera	4	170,827,387 - 170,827,492	UniSTS
RH 3.4 Map	4	1133.75	UniSTS
Cytogenetic Map	4	q44	UniSTS

BE105191

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	182,355,872 - 182,356,040 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	183,899,633 - 183,899,800	NCBI	Rnor6.0
Rnor_5.0	4	248,018,017 - 248,018,184	UniSTS	Rnor5.0
RGSC_v3.4	4	186,783,470 - 186,783,637	UniSTS	RGSC3.4
Celera	4	170,821,636 - 170,821,803	UniSTS
RH 3.4 Map	4	1132.85	UniSTS
Cytogenetic Map	4	q44	UniSTS

RH136867

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	182,361,711 - 182,361,902 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	183,905,470 - 183,905,660	NCBI	Rnor6.0
Rnor_5.0	4	248,023,854 - 248,024,044	UniSTS	Rnor5.0
RGSC_v3.4	4	186,789,307 - 186,789,497	UniSTS	RGSC3.4
Celera	4	170,827,473 - 170,827,663	UniSTS
Cytogenetic Map	4	q44	UniSTS

UniSTS:471005

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	182,355,380 - 182,356,165 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	183,899,141 - 183,899,925	NCBI	Rnor6.0
Rnor_5.0	4	248,017,525 - 248,018,309	UniSTS	Rnor5.0
RGSC_v3.4	4	186,782,978 - 186,783,762	UniSTS	RGSC3.4
Celera	4	170,821,144 - 170,821,928	UniSTS
Cytogenetic Map	4	q44	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001427734	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237708	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763457	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008775874	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008775875	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602890	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602891	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039108930	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039108932	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039108933	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039108935	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039108936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039108937	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286199	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286200	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286201	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286202	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286203	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286204	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286205	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286206	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286207	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286209	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286210	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286211	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286212	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010065651	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_353788	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_600908	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_600909	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC086522	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ231061	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000055437 ⟹ ENSRNOP00000052305

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	184,066,771 - 184,093,524 (+)	Ensembl
mRatBN7.2 Ensembl	4	182,335,495 - 182,362,054 (+)	Ensembl
Rnor_6.0 Ensembl	4	183,896,303 - 183,905,297 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000094270 ⟹ ENSRNOP00000082777

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	184,066,605 - 184,093,524 (+)	Ensembl
mRatBN7.2 Ensembl	4	182,335,454 - 182,361,987 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000148390 ⟹ ENSRNOP00000104323

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	184,066,736 - 184,096,800 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000157652 ⟹ ENSRNOP00000109202

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	184,067,157 - 184,093,368 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000160202 ⟹ ENSRNOP00000112748

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	184,057,010 - 184,098,429 (+)	Ensembl

RefSeq Acc Id:

NM_001427734 ⟹ NP_001414663

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,066,780 - 184,093,374 (+)	NCBI

RefSeq Acc Id:

XM_006237708 ⟹ XP_006237770

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,067,106 - 184,093,374 (+)	NCBI
mRatBN7.2	4	182,335,779 - 182,362,054 (+)	NCBI
Rnor_6.0	4	183,879,177 - 183,905,807 (+)	NCBI
Rnor_5.0	4	247,998,508 - 248,024,196 (+)	NCBI

Sequence:

show sequence

GAGCCAGCTAGACCCGCCCCGACAGAGGCCGCCACCAAACCTCTTGCGCGCTCTACGCTCGTCT
GAGGCCTCGTTCGGTGCTATTGGCTTGTAAGCGCTCGCCGTGCGGCAGGGCCGCTTCGGGTCGG
GCTTTTTGTTCTGCGCCCTGGACTCGGGGCTGGGTTTCGTTCACCTCTGTTCTGGCGGAGGGCC
GCCACCCGGGCCCTCGCTATACCGCGGGTGTCGCTGCGCGCTGAGCGGGCGCGGTCTGCGGTTC
TTGGCCAGAGGTGGCAGGCGGGCTTGTTGCAGCTTCGCGTTCCTTCCGGTTTCGGAAGGAGAAG
CAGAGCTTTGTTTTGCTTTTCGGTTTCTTTCTGTGTCGGTCTTCCGCGCCTGGCCTCTGCGACC
CAGTGGAATTTGCCTTCCACTGCCTCCCAGGAGCGCCCAGGCCTGGGTTTGCGCCGCGGCCCGC
AGCATCTCCGAAGCTGTTTGCATTAAGAGTGCCTTCCTAGAAAAATGGAAAAACAGGATTAGAG
GCATGAATATACTCACTGTGGGAGAGACTAAAAGATTTATGACATTCAAAACCACAGACTTTAC
AATACTGCTAAGCCAGATCAACTATGAGTTGGAATGCAAAACCAGAGAATGCTGTTGCCAAACC
CCCAAAGTTTTCTAAAACGCAGTCATCTATATTACAACAGTTTTTAATGACTTCTACAACTTCT
CAAAGTTCTTTTAGCTATCCTGCCCATAACCAAGAAGCATGCATGTATTCCAGTAACTCAAATT
CAGTTTCCCAGCCACTTCTGAGCGGCAGAAATTATATGACTCCTCAGACTCAGATCTCTGTTTC
TAACATGCCTAGTAGGACAATTGTGACCTCACAGTCTTCAATGGAAGGAGTTGTATGTACAAAT
GTTAAAGGGCCCCAACAACCAAACCACAATTTGCAGACAGTGTCTTCAGGAGTTATGCAGAATG
TCTGGTTTGGCTCATCCGTGAAGAATTTTATGCCTTCCCATACAGAAGCAACCATATCCCATAA
TCCTGATGGAAGGACTAATATGCCTTACATGCAAACACCACAGAGTCAGCTCGTCACATCAGAT
ACCTATTCTATGCAACTGCAAATGGTTCCTTTTAATTCTGGAAAAGTTCCTGTAGCGTATCAAG
GAAATCAGGGACTCAATCACTTCATACCAGATCAGCTGGCTGACTGGACACAGTATACATCCAG
TGAACTAACTTATCCAGAATACAGGCCACCTCTGAAGCAATACTCCCGCATACTGCCAGCCACT
ACATCATTACAAGTTAAAAATAATCCGCTTCCAACTTACACACAGGCCTTACAGTCAAAGCATT
CTGCACCTTTGTCTTCACATCCATATGCTGCAGAAACCAGCAAAAGACTCTCTGCCCTTCCTTA
CAGCTGTAGATATGGAAGCCAACATGTACAAAATACTCAGCCTGTTTCTAAACACTTGCCTATG
GAAGTCCCTCAGAGTCCAGAAGTGCACTCATCTGAAAAAAAGCAAGATTCTTACAGAGGCTTTA
AACAGCAGTGGCAGAACCCCAATGAATCATTCACCATTGGAAAATTCTCTGATTTGAAAATAAA
TGCCAAGCAGTCTTATAGTGACACTGTTAGATCTTCTGGGGATGGTGTTCAGGCGCTTGTTCAA
AATAATCAAGAGAAAAGAAAATATCCCTACAGTCCAAGTACAAATCAAGTAATAGACACAAATG
CCACAAAAGAAAAACTGGCGAGGGATATTAAATCACTAGTAGAAATAAAAAAGAAGTTTACAGA
ACTTGCAAGAAAAATTAAAATTAATAAAAGTCTTTTGATGGCAGCTGGTTGTAGTAAAACAGCC
AATACTTCTTATACTGAACCAATTCAGCATTCTGAATTTTCAGCAAAAGAAATGTCTGCTAAAA
ATGGCAACGACTGCTCCATGGAATTGCTAGCAACATGCCTTTCTCTTTGGAAAAACCAACCTCC
AAAAACCACAGAAGAAAATGTCCCAAAACCTTTAGAAGAAAAACAGTGTAACACCTCACGAATC
AGTACAACGGTAGTTGGCAGTTCACATCCCACAAACGAAGTTCACGTTAAGAGTTTTTGTTCTG
GTGTTGGGAATTCTCAGAAACTGCTGAGCTCATCACAAACAATATTGTCAGTTCTCACTCCGAG
TGGTGAGTCTTCAGGTGTAGCTGTTGGAAAAGGAACAGAGCTTCAGATTGCTGTGGTGTCACCT
TTAGTTCTTGCAGATACTAATCCCTTACCTGGAAAAGAGTTAGCGCCTGAAGTTTTACCAGAAC
CGCCGTATCCAGTTGTTAAGGAAGGTAGTATTTGTAGCTTACAACACCAACAGGCAGAAACTGC
TGCTTTACCTTTTCACATTACAGGAGTAGTAGCAGATAGTAACCTGTCAGTGGAGATGTCTCTG
CCTGCTCAAAAGGAAAAGCAGCATAAACCAACACAGGGTGATCCAGACATAGCTGATCATGGTT
TAGGAAAACTTTCTCCCCTGGGTACCGAAGCTGTGCCTAACTCTGTGGATAGCACCACAGTGAG
TGGACCCATGTTACAGATTGAAAGTATCTGTTCTCTTGCAGAAGGGGATGTATCTTACAATTCC
CAGATAGCAGAGATATTCAACTCTGTACAAAATGAGCCCGAGAAACCTTCACCTAATCAGGTAA
TTAATAATCAACAAGAACAAGTAGATGGCACCACTGAAAATAAAGACTTTAGCCTTCAGAAAGA
TAAGAAGTATATACGGTATACATATGTTCCTCGTGAGATCACTGAGCAGCCAGAGGTGCTGCAG
CCTGAAGAGCCAGCATCTTGTGAGTACGTGGAAGCAAACACAGAAACCATAGAGGAAAGCGGTA
GGGAATGCAGTGGTGGAAAAGAAAGCACAGCTGAGGATGTCTGTTCACCGGCTGGTTTTCAGCA
GGATCCTCACCCTCAGGAAACTGATAGTTTAAGCAATAAGTCAGCCCACTGTCTGCCTGCAGTA
AACGAGATTAATGATGAAAGTGAACCTGTCTCATACCTACATGACCAGCTGTCAGAACTTTTAA
AAGAGTTCCCTTATGGCATTGAAACTGTTAGCAGGCATGAAGTGTCTGTGGACCAAAAAAAGAC
ACACAAAATCTTAGAAAATGAAACTGGCGATAAGACTAGTAACGTGTTTGGGGATAGCACAGAC
CAAATAAAAATTACAGTGTTAAACTCTGAACAAATCAAAGAACTGTTTCCCGAAGAGGATCAGC
CCTGTGACTTAGACAAGTTGGCAGAACCTGAGGGGAAAAATGTTGCAGAAGTGAAGAGCCCATG
TGACTCACAGGTCCCCAGAGAAGAAAGCCATGACTTTGGAATGTTGGACCCAGAGAAAGACAAA
ATCCATTGCTGTGCCTTGGGTTGGCTCTCAATGGTTTATGAGGGTGTGCCAAAGTGTCATTGCA
GTTCCAATGAAGAGAAGGGGAAAGACCAGTGTTTGGATATGAACAGCTGCAAACAAGGAGAGCA
GCCCTGTAATAATGGAATCACTATTTTTGAAATTAATCCTGTTTCTAATAACCCCAAAACTCCT
CTGACCCAAGCAGCTGAGAAAGGCCATTTTTCTGAAATGCATGGTGATAAGACCAAAGGATCTA
AAACAAAAGACAGCAGAGAGGAACAGCAACATTTTTCAGCTAAATGTTACAAAAAAGATAAAGA
TAATTTAAAAATGAGACATGATAGCTCACTGAAAATGGAGCAAAAACTAAAAAATACTTCATCT
GAATGTGACAGACTAAATCCCTCAAAAAGCAGTAAAATAGCAACCCCCGAAATACTTCATGTAA
AAACTTCCAATTCTGATAAAAATATGTCATTTTTTAAACAAGCTTCTCAGGAAAGCCTACAGAG
AAAACCCACTTCCCAAGATTCGAATCCAGTAAAAGCACCTGTAGAACTTCCTTCAAATACAGAT
CCATGCAGGAGGAACACCTCATTGGTACAGTTTGTGTCACCAGAAAAGAAAAAACTAAAATTCA
AAGCAGGTGGCTCCAGACTGAAATATTTTGAAAAAAGAAAGACAGACAACATGATTATACCAGA
TGTGGAGATAAAAAAGAAGAAATATGAAAAGCAAGAGCAGAACAAAAACGCTGGAGAGACACTC
AAATTGTGCAGTGCTCTGAGGGAATCCAATGAAAGAGCCAGTGTTCAAGAGAACGCTATCCCAA
GTCCTGAGTCCTCAGACTCTAAGGGCAGCTCCTTGAAGAGTACTAGAGTTATAACAGTGCAGGA
GTATTTACAACGGCGGAAAGACAAACATGTAACTGGGAGTGACGCTTCCGGAAACATTTGTGTA
GAAAATGTGTTGTGTAACTCTGAACACATGAAGACCAGCAAGGATTCTGCAGAAATAAGCTGGG
AAAAGTCAGCTGACGGGCAGAGCATCCGTGCAGAGACCTCAAAAGAACCAGGACATAATTCTAC
CATCCATGGTAAAGCTTTCAAGATCCACCATTCTGAAGTGTCTAGAACACACAGTGTGTCAAGT
AATAGTAAAGGGAAGCAGCCTGACAAAATCTATAAGGCCCGTACGAGTAATGAGCACAGCCAGG
TGCCTCTTCAGGTAAAGGAACAAAGGAAACAGTACTTGAATCGAGTTGCATTTAAATGCACGGA
ACGGGAAAGCATATGTCTCACAAAGTTGGACAGTGCATCCAAGAAGCTTAGTACAGAGAAAAAG
GAGAGTGAGGCACATACACTCAAGACAAAAAACATAGACAAACCTAGTATGCTAGAGTTTAAAT
TATGTCCAGACGTACTATTGAAGAACACAAGCTCTGTTGACAAGCAGGATGAGCCTGAGCCTAA
GAAAGAGAAAGCACCTGTGCAAGTTTCAGGAATAAAAAGTACAAAAGAAGACTGGTTAAAGTGC
ATCCCTACAAGGACAAAGATGCCTGAATCAAGCCAAGAAATAGATAGTGCTGGCTCAAGACTTT
CTAAGAGAAGCTTCAGCGCAGATGAATTTGAAACACTACAAAACCCAGTAAAAGACTCAAATGT
CATGTTCCGGACCTACAAAAAGATGTACCTTGAGAAGAGAAGCAGAAGCCTCGGGAGTAGTCCA
GTTAAATAGTCACATGAGGGTAGCGGTTTTTGTTTTTACCACCAGGACATCTCTAGTTTTTGCT
TTTAAGGCTCGCTTGCTGAAAATAACTCAGGACTGCCGTTTGGATTTCTCAGCTAAGGAATTCA
GTTACAGCTCATGTTATATTTTTCACTGATAACCGTGTGGATTAGCTGTTGGTGTGCAGGCAAA
AGAATGATTGCGTTTGTCTGGGAACTACAAAGTGTGTGATCTGCGTTATTGAACTACGTTTACT
GTTTTAAGTCTTGCTGGCACTGTGGTGCACACCTGTGACCCTAACATTTGACGCCTGGAGACAA
GGATCAAGAATTGAAGGTCATTCTCAGCAACATAGTAAGTCCAGTGACCTCTCTAAAAGCAAAG
CAACAGCAACCAGAAAGAATATGAAGGTGGCTTGCACAAACCTTACTTTTAAATGCTGTTGTCC
CGAGGTAACTTCATTCACCAAGAACTTGGTTATTTGACTGAGGCTGTAAATAGATTCTTGTTTC
TAAGCACATTAGCAAAATTTATTTTTCAGAAAGTGCCCACTGTGAATGGCAAAGCATATTACTA
AATATTTTGTACCTCATTGTAAAGGTTTTTTTTTTTTTTTCAGAAATCTTGTTTTATACTTTTG
TTAAACTGAATGGAGTTTTTGGAAGATGTCTTTACTTTACTTTTCATACTTGAAATAAACATTT
ATTTTTTAAAGAA

hide sequence

RefSeq Acc Id:

XM_008763457 ⟹ XP_008761679

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,067,106 - 184,093,374 (+)	NCBI
mRatBN7.2	4	182,335,779 - 182,361,407 (+)	NCBI
Rnor_6.0	4	183,879,177 - 183,905,111 (+)	NCBI

Sequence:

show sequence

GAGCCAGCTAGACCCGCCCCGACAGAGGCCGCCACCAAACCTCTTGCGCGCTCTACGCTCGTCT
GAGGCCTCGTTCGGTGCTATTGGCTTGTAAGCGCTCGCCGTGCGGCAGGGCCGCTTCGGGTCGG
GCTTTTTGTTCTGCGCCCTGGACTCGGGGCTGGGTTTCGTTCACCTCTGTTCTGGCGGAGGGCC
GCCACCCGGGCCCTCGCTATACCGCGGGTGTCGCTGCGCGCTGAGCGGGCGCGGTCTGCGGTTC
TTGGCCAGAGGTGGCAGGCGGGCTTGTTGCAGCTTCGCGTTCCTTCCGGTTTCGGAAGGAGAAG
CAGAGCTTTGTTTTGCTTTTCGGTTTCTTTCTGTGTCGGTCTTCCGCGCCTGGCCTCTGCGACC
CAGTGGAATTTGCCTTCCACTGCCTCCCAGGAGCGCCCAGGCCTGGGTTTGCGCCGCGGCCCGC
AGCATCTCCGAAGCTGTTTGCATTAAGAGTGCCTTCCTAGAAAAATGGAAAAACAGGATTAGAG
GCATGAATATACTCACTGTGGGAGAGACTAAAAGGTAAAATTGTATTCAGATTTATGACATTCA
AAACCACAGACTTTACAATACTGCTAAGCCAGATCAACTATGAGTTGGAATGCAAAACCAGAGA
ATGCTGTTGCCAAACCCCCAAAGTTTTCTAAAACGCAGTCATCTATATTACAACAGTTTTTAAT
GACTTCTACAACTTCTCAAAGTTCTTTTAGCTATCCTGCCCATAACCAAGAAGCATGCATGTAT
TCCAGTAACTCAAATTCAGTTTCCCAGCCACTTCTGAGCGGCAGAAATTATATGACTCCTCAGA
CTCAGATCTCTGTTTCTAACATGCCTAGTAGGACAATTGTGACCTCACAGTCTTCAATGGAAGG
AGTTGTATGTACAAATGTTAAAGGGCCCCAACAACCAAACCACAATTTGCAGACAGTGTCTTCA
GGAGTTATGCAGAATGTCTGGTTTGGCTCATCCGTGAAGAATTTTATGCCTTCCCATACAGAAG
CAACCATATCCCATAATCCTGATGGAAGGACTAATATGCCTTACATGCAAACACCACAGAGTCA
GCTCGTCACATCAGATACCTATTCTATGCAACTGCAAATGGTTCCTTTTAATTCTGGAAAAGTT
CCTGTAGCGTATCAAGGAAATCAGGGACTCAATCACTTCATACCAGATCAGCTGGCTGACTGGA
CACAGTATACATCCAGTGAACTAACTTATCCAGAATACAGGCCACCTCTGAAGCAATACTCCCG
CATACTGCCAGCCACTACATCATTACAAGTTAAAAATAATCCGCTTCCAACTTACACACAGGCC
TTACAGTCAAAGCATTCTGCACCTTTGTCTTCACATCCATATGCTGCAGAAACCAGCAAAAGAC
TCTCTGCCCTTCCTTACAGCTGTAGATATGGAAGCCAACATGTACAAAATACTCAGCCTGTTTC
TAAACACTTGCCTATGGAAGTCCCTCAGAGTCCAGAAGTGCACTCATCTGAAAAAAAGCAAGAT
TCTTACAGAGGCTTTAAACAGCAGTGGCAGAACCCCAATGAATCATTCACCATTGGAAAATTCT
CTGATTTGAAAATAAATGCCAAGCAGTCTTATAGTGACACTGTTAGATCTTCTGGGGATGGTGT
TCAGGCGCTTGTTCAAAATAATCAAGAGAAAAGAAAATATCCCTACAGTCCAAGTACAAATCAA
GTAATAGACACAAATGCCACAAAAGAAAAACTGGCGAGGGATATTAAATCACTAGTAGAAATAA
AAAAGAAGTTTACAGAACTTGCAAGAAAAATTAAAATTAATAAAAGTCTTTTGATGGCAGCTGG
TTGTAGTAAAACAGCCAATACTTCTTATACTGAACCAATTCAGCATTCTGAATTTTCAGCAAAA
GAAATGTCTGCTAAAAATGGCAACGACTGCTCCATGGAATTGCTAGCAACATGCCTTTCTCTTT
GGAAAAACCAACCTCCAAAAACCACAGAAGAAAATGTCCCAAAACCTTTAGAAGAAAAACAGTG
TAACACCTCACGAATCAGTACAACGGTAGTTGGCAGTTCACATCCCACAAACGAAGTTCACGTT
AAGAGTTTTTGTTCTGGTGTTGGGAATTCTCAGAAACTGCTGAGCTCATCACAAACAATATTGT
CAGTTCTCACTCCGAGTGGTGAGTCTTCAGGTGTAGCTGTTGGAAAAGGAACAGAGCTTCAGAT
TGCTGTGGTGTCACCTTTAGTTCTTGCAGATACTAATCCCTTACCTGGAAAAGAGTTAGCGCCT
GAAGTTTTACCAGAACCGCCGTATCCAGTTGTTAAGGAAGGTAGTATTTGTAGCTTACAACACC
AACAGGCAGAAACTGCTGCTTTACCTTTTCACATTACAGGAGTAGTAGCAGATAGTAACCTGTC
AGTGGAGATGTCTCTGCCTGCTCAAAAGGAAAAGCAGCATAAACCAACACAGGGTGATCCAGAC
ATAGCTGATCATGGTTTAGGAAAACTTTCTCCCCTGGGTACCGAAGCTGTGCCTAACTCTGTGG
ATAGCACCACAGTGAGTGGACCCATGTTACAGATTGAAAGTATCTGTTCTCTTGCAGAAGGGGA
TGTATCTTACAATTCCCAGATAGCAGAGATATTCAACTCTGTACAAAATGAGCCCGAGAAACCT
TCACCTAATCAGGTAATTAATAATCAACAAGAACAAGTAGATGGCACCACTGAAAATAAAGACT
TTAGCCTTCAGAAAGATAAGAAGTATATACGGTATACATATGTTCCTCGTGAGATCACTGAGCA
GCCAGAGGTGCTGCAGCCTGAAGAGCCAGCATCTTGTGAGTACGTGGAAGCAAACACAGAAACC
ATAGAGGAAAGCGGTAGGGAATGCAGTGGTGGAAAAGAAAGCACAGCTGAGGATGTCTGTTCAC
CGGCTGGTTTTCAGCAGGATCCTCACCCTCAGGAAACTGATAGTTTAAGCAATAAGTCAGCCCA
CTGTCTGCCTGCAGTAAACGAGATTAATGATGAAAGTGAACCTGTCTCATACCTACATGACCAG
CTGTCAGAACTTTTAAAAGAGTTCCCTTATGGCATTGAAACTGTTAGCAGGCATGAAGTGTCTG
TGGACCAAAAAAAGACACACAAAATCTTAGAAAATGAAACTGGCGATAAGACTAGTAACGTGTT
TGGGGATAGCACAGACCAAATAAAAATTACAGTGTTAAACTCTGAACAAATCAAAGAACTGTTT
CCCGAAGAGGATCAGCCCTGTGACTTAGACAAGTTGGCAGAACCTGAGGGGAAAAATGTTGCAG
AAGTGAAGAGCCCATGTGACTCACAGGTCCCCAGAGAAGAAAGCCATGACTTTGGAATGTTGGA
CCCAGAGAAAGACAAAATCCATTGCTGTGCCTTGGGTTGGCTCTCAATGGTTTATGAGGGTGTG
CCAAAGTGTCATTGCAGTTCCAATGAAGAGAAGGGGAAAGACCAGTGTTTGGATATGAACAGCT
GCAAACAAGGAGAGCAGCCCTGTAATAATGGAATCACTATTTTTGAAATTAATCCTGTTTCTAA
TAACCCCAAAACTCCTCTGACCCAAGCAGCTGAGAAAGGCCATTTTTCTGAAATGCATGGTGAT
AAGACCAAAGGATCTAAAACAAAAGACAGCAGAGAGGAACAGCAACATTTTTCAGCTAAATGTT
ACAAAAAAGATAAAGATAATTTAAAAATGAGACATGATAGCTCACTGAAAATGGAGCAAAAACT
AAAAAATACTTCATCTGAATGTGACAGACTAAATCCCTCAAAAAGCAGTAAAATAGCAACCCCC
GAAATACTTCATGTAAAAACTTCCAATTCTGATAAAAATATGTCATTTTTTAAACAAGCTTCTC
AGGAAAGCCTACAGAGAAAACCCACTTCCCAAGATTCGAATCCAGTAAAAGCACCTGTAGAACT
TCCTTCAAATACAGATCCATGCAGGAGGAACACCTCATTGGTACAGTTTGTGTCACCAGAAAAG
AAAAAACTAAAATTCAAAGCAGGTGGCTCCAGACTGAAATATTTTGAAAAAAGAAAGACAGACA
ACATGATTATACCAGATGTGGAGATAAAAAAGAAGAAATATGAAAAGCAAGAGCAGAACAAAAA
CGCTGGAGAGACACTCAAATTGTGCAGTGCTCTGAGGGAATCCAATGAAAGAGCCAGTGTTCAA
GAGAACGCTATCCCAAGTCCTGAGTCCTCAGACTCTAAGGGCAGCTCCTTGAAGAGTACTAGAG
TTATAACAGTGCAGGAGTATTTACAACGGCGGAAAGACAAACATGTAACTGGGAGTGACGCTTC
CGGAAACATTTGTGTAGAAAATGTGTTGTGTAACTCTGAACACATGAAGACCAGCAAGGATTCT
GCAGAAATAAGCTGGGAAAAGTCAGCTGACGGGCAGAGCATCCGTGCAGAGACCTCAAAAGAAC
CAGGACATAATTCTACCATCCATGGTAAAGCTTTCAAGATCCACCATTCTGAAGTGTCTAGAAC
ACACAGTGTGTCAAGTAATAGTAAAGGGAAGCAGCCTGACAAAATCTATAAGGCCCGTACGAGT
AATGAGCACAGCCAGGTGCCTCTTCAGGTAAAGGAACAAAGGAAACAGTACTTGAATCGAGTTG
CATTTAAATGCACGGAACGGGAAAGCATATGTCTCACAAAGTTGGACAGTGCATCCAAGAAGCT
TAGTACAGAGAAAAAGGAGAGTGAGGCACATACACTCAAGACAAAAAACATAGACAAACCTAGT
ATGCTAGAGTTTAAATTATGTCCAGACGTACTATTGAAGAACACAAGCTCTGTTGACAAGCAGG
ATGAGCCTGAGCCTAAGAAAGAGAAAGCACCTGTGCAAGTTTCAGGAATAAAAAGTACAAAAGA
AGACTGGTTAAAGTGCATCCCTACAAGGACAAAGATGCCTGAATCAAGCCAAGAAATAGTGCTG
GCTCAAGACTTTCTAAGAGAAGCTTCAGCGCAGATGAATTTGAAACACTACAAAACCCAGTAAA
AGACTCAAATGTCATGTTCCGGACCTACAAAAAGATGTACCTTGAGAAGAGAAGCAGAAGCCTC
GGGAGTAGTCCAGTTAAATAGTCACATGAGGGT

hide sequence

RefSeq Acc Id:

XM_039108930 ⟹ XP_038964858

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,057,178 - 184,093,374 (+)	NCBI
mRatBN7.2	4	182,325,913 - 182,362,054 (+)	NCBI

RefSeq Acc Id:

XM_039108932 ⟹ XP_038964860

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,067,106 - 184,093,374 (+)	NCBI
mRatBN7.2	4	182,335,779 - 182,362,054 (+)	NCBI

RefSeq Acc Id:

XM_039108933 ⟹ XP_038964861

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,067,106 - 184,093,374 (+)	NCBI
mRatBN7.2	4	182,335,779 - 182,362,054 (+)	NCBI

RefSeq Acc Id:

XM_039108935 ⟹ XP_038964863

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,057,191 - 184,093,374 (+)	NCBI
mRatBN7.2	4	182,325,916 - 182,362,054 (+)	NCBI

RefSeq Acc Id:

XM_039108936 ⟹ XP_038964864

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,067,106 - 184,093,374 (+)	NCBI
mRatBN7.2	4	182,335,779 - 182,362,054 (+)	NCBI

RefSeq Acc Id:

XM_039108937 ⟹ XP_038964865

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,067,106 - 184,093,374 (+)	NCBI
mRatBN7.2	4	182,335,779 - 182,361,407 (+)	NCBI

RefSeq Acc Id:

XM_063286199 ⟹ XP_063142269

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,067,106 - 184,093,374 (+)	NCBI

RefSeq Acc Id:

XM_063286200 ⟹ XP_063142270

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,067,106 - 184,093,374 (+)	NCBI

RefSeq Acc Id:

XM_063286201 ⟹ XP_063142271

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,067,106 - 184,093,374 (+)	NCBI

RefSeq Acc Id:

XM_063286202 ⟹ XP_063142272

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,067,106 - 184,093,374 (+)	NCBI

RefSeq Acc Id:

XM_063286203 ⟹ XP_063142273

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,067,106 - 184,093,374 (+)	NCBI

RefSeq Acc Id:

XM_063286204 ⟹ XP_063142274

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,057,238 - 184,093,374 (+)	NCBI

RefSeq Acc Id:

XM_063286205 ⟹ XP_063142275

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,067,106 - 184,093,374 (+)	NCBI

RefSeq Acc Id:

XM_063286206 ⟹ XP_063142276

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,067,106 - 184,093,374 (+)	NCBI

RefSeq Acc Id:

XM_063286207 ⟹ XP_063142277

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,057,165 - 184,093,374 (+)	NCBI

RefSeq Acc Id:

XM_063286208 ⟹ XP_063142278

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,057,165 - 184,093,374 (+)	NCBI

RefSeq Acc Id:

XM_063286209 ⟹ XP_063142279

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,057,169 - 184,093,374 (+)	NCBI

RefSeq Acc Id:

XM_063286210 ⟹ XP_063142280

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,057,178 - 184,093,374 (+)	NCBI

RefSeq Acc Id:

XM_063286211 ⟹ XP_063142281

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,057,169 - 184,093,374 (+)	NCBI

RefSeq Acc Id:

XM_063286212 ⟹ XP_063142282

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,067,106 - 184,089,710 (+)	NCBI

RefSeq Acc Id:

XR_010065651

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,067,106 - 184,089,771 (+)	NCBI

RefSeq Acc Id:

XR_353788

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	184,067,106 - 184,089,771 (+)	NCBI
mRatBN7.2	4	182,335,779 - 182,362,054 (+)	NCBI
Rnor_6.0	4	183,879,177 - 183,905,807 (+)	NCBI
Rnor_5.0	4	247,998,508 - 248,024,196 (+)	NCBI

Sequence:

show sequence

GAGCCAGCTAGACCCGCCCCGACAGAGGCCGCCACCAAACCTCTTGCGCGCTCTACGCTCGTCT
GAGGCCTCGTTCGGTGCTATTGGCTTGTAAGCGCTCGCCGTGCGGCAGGGCCGCTTCGGGTCGG
GCTTTTTGTTCTGCGCCCTGGACTCGGGGCTGGGTTTCGTTCACCTCTGTTCTGGCGGAGGGCC
GCCACCCGGGCCCTCGCTATACCGCGGGTGTCGCTGCGCGCTGAGCGGGCGCGGTCTGCGGTTC
TTGGCCAGAGGTGGCAGGCGGGCTTGTTGCAGCTTCGCGTTCCTTCCGGTTTCGGAAGGAGAAG
CAGAGCTTTGTTTTGCTTTTCGGTTTCTTTCTGTGTCGGTCTTCCGCGCCTGGCCTCTGCGACC
CAGTGGAATTTGCCTTCCACTGCCTCCCAGGAGCGCCCAGGCCTGGGTTTGCGCCGCGGCCCGC
AGCATCTCCGAAGCTGTTTGCATTAAGAGTGCCTTCCTAGAAAAATGGAAAAACAGGATTAGAG
GCATGAATATACTCACTGTGGGAGAGACTAAAAGGTAAAATTGTATTCAGATTTATGACATTCA
AAACCACAGACTTTACAATACTGCTAAGCCAGATCAACTATGAGTTGGAATGCAAAACCAGAGA
ATGCTGTTGCCAAACCCCCAAAGTTTTCTAAAACGCAGTCATCTATATTACAACAGTTTTTAAT
GACTTCTACAACTTCTCAAAGTTCTTTTAGCTATCCTGCCCATAACCAAGAAGCATGCATGTAT
TCCAGTAACTCAAATTCAGTTTCCCAGCCACTTCTGAGCGGCAGAAATTATATGACTCCTCAGA
CTCAGATCTCTGTTTCTAACATGCCTAGTAGGACAATTGTGACCTCACAGTCTTCAATGGAAGG
AGTTGTATGTACAAATGTTAAAGGGCCCCAACAACCAAACCACAATTTGCAGACAGTGTCTTCA
GGAGTTATGCAGAATGTCTGGTTTGGCTCATCCGTGAAGAATTTTATGCCTTCCCATACAGAAG
CAACCATATCCCATAATCCTGATGGAAGGACTAATATGCCTTACATGCAAACACCACAGAGTCA
GCTCGTCACATCAGATACCTATTCTATGCAACTGCAAATGGTTCCTTTTAATTCTGGAAAAGTT
CCTGTAGCGTATCAAGGAAATCAGGGACTCAATCACTTCATACCAGATCAGCTGGCTGACTGGA
CACAGTATACATCCAGTGAACTAACTTATCCAGAATACAGGCCACCTCTGAAGCAATACTCCCG
CATACTGCCAGCCACTACATCATTACAAGTTAAAAATAATCCGCTTCCAACTTACACACAGGCC
TTACAGTCAAAGCATTCTGCACCTTTGTCTTCACATCCATATGCTGCAGAAACCAGCAAAAGAC
TCTCTGCCCTTCCTTACAGCTGTAGATATGGAAGCCAACATGTACAAAATACTCAGCCTGTTTC
TAAACACTTGCCTATGGAAGTCCCTCAGAGTCCAGAAGTGCACTCATCTGAAAAAAAGCAAGAT
TCTTACAGAGGCTTTAAACAGCAGTGGCAGAACCCCAATGAATCATTCACCATTGGAAAATTCT
CTGATTTGAAAATAAATGCCAAGCAGTCTTATAGTGACACTGTTAGATCTTCTGGGGATGGTGT
TCAGGCGCTTGTTCAAAATAATCAAGAGAAAAGAAAATATCCCTACAGTCCAAGTACAAATCAA
GTAATAGACACAAATGCCACAAAAGAAAAACTGGCGAGGGATATTAAATCACTAGTAGAAATAA
AAAAGAAGTTTACAGAACTTGCAAGAAAAATTAAAATTAATAAAAGTCTTTTGATGGCAGCTGG
TTGTAGTAAAACAGCCAATACTTCTTATACTGAACCAATTCAGCATTCTGAATTTTCAGCAAAA
GAAATGTCTGCTAAAAATGGCAACGACTGCTCCATGGAATTGCTAGCAACATGCCTTTCTCTTT
GGAAAAACCAACCTCCAAAAACCACAGAAGAAAATGTCCCAAAACCTTTAGAAGAAAAACAGTG
TAACACCTCACGAATCAGTACAACGGTAGTTGGCAGTTCACATCCCACAAACGAAGTTCACGTT
AAGAGTTTTTGTTCTGGTGTTGGGAATTCTCAGAAACTGCTGAGCTCATCACAAACAATATTGT
CAGTTCTCACTCCGAGTGGTGAGTCTTCAGGTGTAGCTGTTGGAAAAGGAACAGAGCTTCAGAT
TGCTGTGGTGTCACCTTTAGTTCTTGCAGATACTAATCCCTTACCTGGAAAAGAGTTAGCGCCT
GAAGTTTTACCAGAACCGCCGTATCCAGTTGTTAAGGAAGGTAGTATTTGTAGCTTACAACACC
AACAGGCAGAAACTGCTGCTTTACCTTTTCACATTACAGGAGTAGTAGCAGATAGTAACCTGTC
AGTGGAGATGTCTCTGCCTGCTCAAAAGGAAAAGCAGCATAAACCAACACAGGGTGATCCAGAC
ATAGCTGATCATGGTTTAGGAAAACTTTCTCCCCTGGGTACCGAAGCTGTGCCTAACTCTGTGG
ATAGCACCACAGTGAGTGGACCCATGTTACAGATTGAAAGTATCTGTTCTCTTGCAGAAGGGGA
TGTATCTTACAATTCCCAGATAGCAGAGATATTCAACTCTGTACAAAATGAGCCCGAGAAACCT
TCACCTAATCAGGTAATTAATAATCAACAAGAACAAGTAGATGGCACCACTGAAAATAAAGACT
TTAGCCTTCAGAAAGATAAGAAGTATATACGGTATACATATGTTCCTCGTGAGATCACTGAGCA
GCCAGAGGTGCTGCAGCCTGAAGAGCCAGCATCTTGTGAGTACGTGGAAGCAAACACAGAAACC
ATAGAGGAAAGCGGTAGGGAATGCAGTGGTGGAAAAGAAAGCACAGCTGAGGATGTCTGTTCAC
CGGCTGGTTTTCAGCAGGATCCTCACCCTCAGGAAACTGATAGTTTAAGCAATAAGTCAGCCCA
CTGTCTGCCTGCAGTAAACGAGATTAATGATGAAAGTGAACCTGTCTCATACCTACATGACCAG
CTGTCAGAACTTTTAAAAGAGTTCCCTTATGGCATTGAAACTGTTAGCAGGCATGAAGTGTCTG
TGGACCAAAAAAAGACACACAAAATCTTAGAAAATGAAACTGGCGATAAGACTAGTAACGTGTT
TGGGGATAGCACAGACCAAATAAAAATTACAGTGTTAAACTCTGAACAAATCAAAGAACTGTTT
CCCGAAGAGGATCAGCCCTGTGACTTAGACAAGTTGGCAGAACCTGAGGGGAAAAATGTTGCAG
AAGTGAAGAGCCCATGTGACTCACAGGTCCCCAGAGAAGAAAGCCATGACTTTGGAATGTTGGA
CCCAGAGAAAGACAAAATCCATTGCTGTGCCTTGGGTTGGCTCTCAATGGTTTATGAGGGTGTG
CCAAAGTGTCATTGCAGTTCCAATGAAGAGAAGGGGAAAGACCAGTGTTTGGATATGAACAGCT
GCAAACAAGGAGAGCAGCCCTGTAATAATGGAATCACTATTTTTGAAATTAATCCTGTTTCTAA
TAACCCCAAAACTCCTCTGACCCAAGCAGCTGAGAAAGGCCATTTTTCTGAAATGCATGGTGAT
AAGACCAAAGGATCTAAAACAAAAGACAGCAGAGAGGAACAGCAACATTTTTCAGCTAAATGTT
ACAAAAAAGATAAAGATAATTTAAAAATGAGACATGATAGCTCACTGAAAATGGAGCAAAAACT
AAAAAATACTTCATCTGAATGTGACAGACTAAATCCCTCAAAAAGCAGTAAAATAGCAACCCCC
GAAATACTTCATGTAAAAACTTCCAATTCTGATAAAAATATGTCATTTTTTAAACAAGCTTCTC
AGGAAAGCCTACAGAGAAAACCCACTTCCCAAGATTCGAATCCAGTAAAAGCACCTGTAGAACT
TCCTTCAAATACAGATCCATGCAGGAGGAACACCTCATTGGTACAGTTTGTGTCACCAGAAAAG
AAAAAACTAAAATTCAAAGCAGGTGGCTCCAGACTGAAATATTTTGAAAAAAGAAAGACAGACA
ACATGATTATACCAGATGTGGAGATAAAAAAGAAGAAATATGAAAAGCAAGAGCAGAACAAAAA
CGCTGGAGAGACACTCAAATTGTGCAGTGCTCTGAGGGAATCCAATGAAAGAGCCAGTGTTCAA
GAGAACGCTATCCCAAGTCCTGAGTCCTCAGACTCTAAGGGCAGCTCCTTGAAGAGTACTAGAG
TTATAACAGTGCAGGAGTATTTACAACGGCGGAAAGACAAACATGTAACTGGGAGTGACGCTTC
CGGAAACATTTGTGTAGAAAATGTGTTGTGTAACTCTGAACACATGAAGACCAGCAAGGATTCT
GCAGAAATAAGCTGGGAAAAGTCAGCTGACGGGCAGAGCATCCGTGCAGAGACCTCAAAAGAAC
CAGGACATAATTCTACCATCCATGGTAAAGCTTTCAAGATCCACCATTCTGAAGTGTCTAGAAC
ACACAGTGTGTCAAGTAATAGTAAAGGGAAGCAGCCTGACAAAATCTATAAGGCCCGTACGAGT
AATGAGCACAGCCAGGTGCCTCTTCAGGTAAAGGAACAAAGGAAACAGTACTTGAATCGAGTTG
CATTTAAATGCACGGAACGGGAAAGCATATGTCTCACAAAGTTGGACAGTGCATCCAAGAAGCT
TAGTACAGAGAAAAAGGAGAGTGAGGCACATACACTCAAGACAAAAAACATAGACAAACCTAGT
ATGCTAGAGTTTAAATTATGTCCAGACGTACTATTGAAGAACACAAGCTCTGTTGACAAGCAGG
ATGAGCCTGAGCCTAAGAAAGAGAAAGCACCTGTGCAAGTGAAACTACTAGTGTAATTTCAGAG
GCTCTTACGTGAAACCGTTCCAAACACTGGGAGGTACTGTACCTGTTGCATTTGTTACTTTGAC
ACTGAGGATGAAGATGCTATCCCCAAACATAAAAGTTTCAGGAATAAAAAGTACAAAAGAAGAC
TGGTTAAAGTGCATCCCTACAAGGACAAAGATGCCTGAATCAAGCCAAGAAATAGATAGTGCTG
GCTCAAGACTTTCTAAGAGAAGCTTCAGCGCAGATGAATTTGAAACACTACAAAACCCAGTAAA
AGACTCAAATGTCATGTTCCGGACCTACAAAAAGATGTACCTTGAGAAGAGAAGCAGAAGCCTC
GGGAGTAGTCCAGTTAAATAGTCACATGAGGGTAGCGGTTTTTGTTTTTACCACCAGGACATCT
CTAGTTTTTGCTTTTAAGGCTCGCTTGCTGAAAATAACTCAGGACTGCCGTTTGGATTTCTCAG
CTAAGGAATTCAGTTACAGCTCATGTTATATTTTTCACTGATAACCGTGTGGATTAGCTGTTGG
TGTGCAGGCAAAAGAATGATTGCGTTTGTCTGGGAACTACAAAGTGTGTGATCTGCGTTATTGA
ACTACGTTTACTGTTTTAAGTCTTGCTGGCACTGTGGTGCACACCTGTGACCCTAACATTTGAC
GCCTGGAGACAAGGATCAAGAATTGAAGGTCATTCTCAGCAACATAGTAAGTCCAGTGACCTCT
CTAAAAGCAAAGCAACAGCAACCAGAAAGAATATGAAGGTGGCTTGCACAAACCTTACTTTTAA
ATGCTGTTGTCCCGAGGTAACTTCATTCACCAAGAACTTGGTTATTTGACTGAGGCTGTAAATA
GATTCTTGTTTCTAAGCACATTAGCAAAATTTATTTTTCAGAAAGTGCCCACTGTGAATGGCAA
AGCATATTACTAAATATTTTGTACCTCATTGTAAAGGTTTTTTTTTTTTTTTCAGAAATCTTGT
TTTATACTTTTGTTAAACTGAATGGAGTTTTTGGAAGATGTCTTTACTTTACTTTTCATACTTG
AAATAAACATTTATTTTTTAAAGAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001414663	(Get FASTA)	NCBI Sequence Viewer
	XP_006237770	(Get FASTA)	NCBI Sequence Viewer
	XP_008761679	(Get FASTA)	NCBI Sequence Viewer
	XP_038964858	(Get FASTA)	NCBI Sequence Viewer
	XP_038964860	(Get FASTA)	NCBI Sequence Viewer
	XP_038964861	(Get FASTA)	NCBI Sequence Viewer
	XP_038964863	(Get FASTA)	NCBI Sequence Viewer
	XP_038964864	(Get FASTA)	NCBI Sequence Viewer
	XP_038964865	(Get FASTA)	NCBI Sequence Viewer
	XP_063142269	(Get FASTA)	NCBI Sequence Viewer
	XP_063142270	(Get FASTA)	NCBI Sequence Viewer
	XP_063142271	(Get FASTA)	NCBI Sequence Viewer
	XP_063142272	(Get FASTA)	NCBI Sequence Viewer
	XP_063142273	(Get FASTA)	NCBI Sequence Viewer
	XP_063142274	(Get FASTA)	NCBI Sequence Viewer
	XP_063142275	(Get FASTA)	NCBI Sequence Viewer
	XP_063142276	(Get FASTA)	NCBI Sequence Viewer
	XP_063142277	(Get FASTA)	NCBI Sequence Viewer
	XP_063142278	(Get FASTA)	NCBI Sequence Viewer
	XP_063142279	(Get FASTA)	NCBI Sequence Viewer
	XP_063142280	(Get FASTA)	NCBI Sequence Viewer
	XP_063142281	(Get FASTA)	NCBI Sequence Viewer
	XP_063142282	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH86522	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000052305.6
	ENSRNOP00000082777.1
	ENSRNOP00000104323.1
	ENSRNOP00000109202
	ENSRNOP00000109202.1
	ENSRNOP00000112748.1

RefSeq Acc Id:	XP_006237770 ⟸ XM_006237708
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSWNAKPENAVAKPPKFSKTQSSILQQFLMTSTTSQSSFSYPAHNQEACMYSSNSNSVSQPLLS GRNYMTPQTQISVSNMPSRTIVTSQSSMEGVVCTNVKGPQQPNHNLQTVSSGVMQNVWFGSSVK NFMPSHTEATISHNPDGRTNMPYMQTPQSQLVTSDTYSMQLQMVPFNSGKVPVAYQGNQGLNHF IPDQLADWTQYTSSELTYPEYRPPLKQYSRILPATTSLQVKNNPLPTYTQALQSKHSAPLSSHP YAAETSKRLSALPYSCRYGSQHVQNTQPVSKHLPMEVPQSPEVHSSEKKQDSYRGFKQQWQNPN ESFTIGKFSDLKINAKQSYSDTVRSSGDGVQALVQNNQEKRKYPYSPSTNQVIDTNATKEKLAR DIKSLVEIKKKFTELARKIKINKSLLMAAGCSKTANTSYTEPIQHSEFSAKEMSAKNGNDCSME LLATCLSLWKNQPPKTTEENVPKPLEEKQCNTSRISTTVVGSSHPTNEVHVKSFCSGVGNSQKL LSSSQTILSVLTPSGESSGVAVGKGTELQIAVVSPLVLADTNPLPGKELAPEVLPEPPYPVVKE GSICSLQHQQAETAALPFHITGVVADSNLSVEMSLPAQKEKQHKPTQGDPDIADHGLGKLSPLG TEAVPNSVDSTTVSGPMLQIESICSLAEGDVSYNSQIAEIFNSVQNEPEKPSPNQVINNQQEQV DGTTENKDFSLQKDKKYIRYTYVPREITEQPEVLQPEEPASCEYVEANTETIEESGRECSGGKE STAEDVCSPAGFQQDPHPQETDSLSNKSAHCLPAVNEINDESEPVSYLHDQLSELLKEFPYGIE TVSRHEVSVDQKKTHKILENETGDKTSNVFGDSTDQIKITVLNSEQIKELFPEEDQPCDLDKLA EPEGKNVAEVKSPCDSQVPREESHDFGMLDPEKDKIHCCALGWLSMVYEGVPKCHCSSNEEKGK DQCLDMNSCKQGEQPCNNGITIFEINPVSNNPKTPLTQAAEKGHFSEMHGDKTKGSKTKDSREE QQHFSAKCYKKDKDNLKMRHDSSLKMEQKLKNTSSECDRLNPSKSSKIATPEILHVKTSNSDKN MSFFKQASQESLQRKPTSQDSNPVKAPVELPSNTDPCRRNTSLVQFVSPEKKKLKFKAGGSRLK YFEKRKTDNMIIPDVEIKKKKYEKQEQNKNAGETLKLCSALRESNERASVQENAIPSPESSDSK GSSLKSTRVITVQEYLQRRKDKHVTGSDASGNICVENVLCNSEHMKTSKDSAEISWEKSADGQS IRAETSKEPGHNSTIHGKAFKIHHSEVSRTHSVSSNSKGKQPDKIYKARTSNEHSQVPLQVKEQ RKQYLNRVAFKCTERESICLTKLDSASKKLSTEKKESEAHTLKTKNIDKPSMLEFKLCPDVLLK NTSSVDKQDEPEPKKEKAPVQVSGIKSTKEDWLKCIPTRTKMPESSQEIDSAGSRLSKRSFSAD EFETLQNPVKDSNVMFRTYKKMYLEKRSRSLGSSPVK hide sequence

RefSeq Acc Id:	XP_008761679 ⟸ XM_008763457
- Peptide Label:	isoform X2
- UniProtKB:	E9PU57 (UniProtKB/TrEMBL), A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSWNAKPENAVAKPPKFSKTQSSILQQFLMTSTTSQSSFSYPAHNQEACMYSSNSNSVSQPLLS GRNYMTPQTQISVSNMPSRTIVTSQSSMEGVVCTNVKGPQQPNHNLQTVSSGVMQNVWFGSSVK NFMPSHTEATISHNPDGRTNMPYMQTPQSQLVTSDTYSMQLQMVPFNSGKVPVAYQGNQGLNHF IPDQLADWTQYTSSELTYPEYRPPLKQYSRILPATTSLQVKNNPLPTYTQALQSKHSAPLSSHP YAAETSKRLSALPYSCRYGSQHVQNTQPVSKHLPMEVPQSPEVHSSEKKQDSYRGFKQQWQNPN ESFTIGKFSDLKINAKQSYSDTVRSSGDGVQALVQNNQEKRKYPYSPSTNQVIDTNATKEKLAR DIKSLVEIKKKFTELARKIKINKSLLMAAGCSKTANTSYTEPIQHSEFSAKEMSAKNGNDCSME LLATCLSLWKNQPPKTTEENVPKPLEEKQCNTSRISTTVVGSSHPTNEVHVKSFCSGVGNSQKL LSSSQTILSVLTPSGESSGVAVGKGTELQIAVVSPLVLADTNPLPGKELAPEVLPEPPYPVVKE GSICSLQHQQAETAALPFHITGVVADSNLSVEMSLPAQKEKQHKPTQGDPDIADHGLGKLSPLG TEAVPNSVDSTTVSGPMLQIESICSLAEGDVSYNSQIAEIFNSVQNEPEKPSPNQVINNQQEQV DGTTENKDFSLQKDKKYIRYTYVPREITEQPEVLQPEEPASCEYVEANTETIEESGRECSGGKE STAEDVCSPAGFQQDPHPQETDSLSNKSAHCLPAVNEINDESEPVSYLHDQLSELLKEFPYGIE TVSRHEVSVDQKKTHKILENETGDKTSNVFGDSTDQIKITVLNSEQIKELFPEEDQPCDLDKLA EPEGKNVAEVKSPCDSQVPREESHDFGMLDPEKDKIHCCALGWLSMVYEGVPKCHCSSNEEKGK DQCLDMNSCKQGEQPCNNGITIFEINPVSNNPKTPLTQAAEKGHFSEMHGDKTKGSKTKDSREE QQHFSAKCYKKDKDNLKMRHDSSLKMEQKLKNTSSECDRLNPSKSSKIATPEILHVKTSNSDKN MSFFKQASQESLQRKPTSQDSNPVKAPVELPSNTDPCRRNTSLVQFVSPEKKKLKFKAGGSRLK YFEKRKTDNMIIPDVEIKKKKYEKQEQNKNAGETLKLCSALRESNERASVQENAIPSPESSDSK GSSLKSTRVITVQEYLQRRKDKHVTGSDASGNICVENVLCNSEHMKTSKDSAEISWEKSADGQS IRAETSKEPGHNSTIHGKAFKIHHSEVSRTHSVSSNSKGKQPDKIYKARTSNEHSQVPLQVKEQ RKQYLNRVAFKCTERESICLTKLDSASKKLSTEKKESEAHTLKTKNIDKPSMLEFKLCPDVLLK NTSSVDKQDEPEPKKEKAPVQVSGIKSTKEDWLKCIPTRTKMPESSQEIVLAQDFLREASAQMN LKHYKTQ hide sequence

Ensembl Acc Id:

ENSRNOP00000052305 ⟸ ENSRNOT00000055437

RefSeq Acc Id:	XP_038964858 ⟸ XM_039108930
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038964863 ⟸ XM_039108935
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038964860 ⟸ XM_039108932
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038964861 ⟸ XM_039108933
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038964864 ⟸ XM_039108936
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038964865 ⟸ XM_039108937
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000082777 ⟸ ENSRNOT00000094270

RefSeq Acc Id:	XP_063142277 ⟸ XM_063286207
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142278 ⟸ XM_063286208
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142281 ⟸ XM_063286211
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142279 ⟸ XM_063286209
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142280 ⟸ XM_063286210
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142274 ⟸ XM_063286204
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001414663 ⟸ NM_001427734
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142270 ⟸ XM_063286200
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142272 ⟸ XM_063286202
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142273 ⟸ XM_063286203
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142275 ⟸ XM_063286205
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142271 ⟸ XM_063286201
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142269 ⟸ XM_063286199
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142276 ⟸ XM_063286206
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142282 ⟸ XM_063286212
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I5ZXS0 (UniProtKB/TrEMBL), A6IN75 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000104323 ⟸ ENSRNOT00000148390

Ensembl Acc Id:

ENSRNOP00000109202 ⟸ ENSRNOT00000157652

Ensembl Acc Id:

ENSRNOP00000112748 ⟸ ENSRNOT00000160202

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-E9PU57-F1-model_v2	AlphaFold	E9PU57	1-1509	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309621	AgrOrtholog
BioCyc Gene	G2FUF-42352	BioCyc
Ensembl Genes	ENSRNOG00000036913	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000055437	ENTREZGENE
	ENSRNOT00000055437.6	UniProtKB/TrEMBL
	ENSRNOT00000094270.2	UniProtKB/TrEMBL
	ENSRNOT00000148390.1	UniProtKB/TrEMBL
	ENSRNOT00000157652	ENTREZGENE
	ENSRNOT00000157652.1	UniProtKB/TrEMBL
	ENSRNOT00000160202.1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7302977	IMAGE-MGC_LOAD
InterPro	DUF4617	UniProtKB/TrEMBL
MGC_CLONE	MGC:105661	IMAGE-MGC_LOAD
NCBI Gene	316982	ENTREZGENE
PANTHER	PTHR21604	UniProtKB/TrEMBL
	RETROELEMENT SILENCING FACTOR 1	UniProtKB/TrEMBL
Pfam	DUF4617	UniProtKB/TrEMBL
PhenoGen	Resf1	PhenoGen
RatGTEx	ENSRNOG00000036913	RatGTEx
UniProt	A0A8I5ZXS0	ENTREZGENE
	A0ABK0LW17_RAT	UniProtKB/TrEMBL
	A6IN75	ENTREZGENE, UniProtKB/TrEMBL
	E9PU57	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A8I5ZXS0	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-06-29	Resf1	retroelement silencing factor 1	RGD1309621	similar to hypothetical protein FLJ10652	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	RGD1309621	similar to hypothetical protein FLJ10652	RGD1309621_predicted	similar to hypothetical protein FLJ10652 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1309621_predicted	similar to hypothetical protein FLJ10652 (predicted)	LOC316982_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC316982_predicted	similar to hypothetical protein FLJ10652 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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