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Gene: Aopep (aminopeptidase O) Rattus norvegicus

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Symbol:

Aopep

Name:

aminopeptidase O

RGD ID:

1309592

Description:

Predicted to enable metalloaminopeptidase activity and zinc ion binding activity. Predicted to be involved in proteolysis. Predicted to be located in nucleus. Predicted to be active in nucleolus. Human ortholog(s) of this gene implicated in dystonia 31. Orthologous to human AOPEP (aminopeptidase O (putative)); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 3,3',4,4',5-pentachlorobiphenyl.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

AP-O; Apo; LOC290963; Npepo; RGD1309592; similar to hypothetical protein FLJ14675

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	AOPEP (aminopeptidase O (putative))	HGNC	EggNOG, Ensembl, HomoloGene, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Aopep (aminopeptidase O)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Aopep (aminopeptidase O (putative))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	AOPEP (aminopeptidase O (putative))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	AOPEP (aminopeptidase O (putative))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Aopep (aminopeptidase O (putative))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	AOPEP (aminopeptidase O (putative))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	AOPEP (aminopeptidase O (putative))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Aopep (aminopeptidase O (putative))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Aopep (aminopeptidase O (putative))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	AOPEP (aminopeptidase O (putative))	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Aopep (aminopeptidase O)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	aopep (aminopeptidase O (putative))	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	aopep	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	1,817,001 - 2,133,008 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	1,817,001 - 2,133,104 (-)	Ensembl				GRCr8
mRatBN7.2	17	1,811,281 - 2,127,316 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	1,811,980 - 2,127,331 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	1,829,980 - 2,145,965 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	3,372,578 - 3,688,561 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	1,827,430 - 2,143,418 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	507,389 - 825,062 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	507,377 - 821,582 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	550,168 - 550,965 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Rnor_5.0	17	568,777 - 814,393 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	7,353,426 - 7,624,936 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	446,696 - 707,342 (+)	NCBI		Celera
RGSC_v3.1	17	7,353,425 - 7,624,936 (-)	NCBI
Cytogenetic Map	17	p14	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

atrial fibrillation (ISO)

breast cancer (ISO)

dystonia 31 (ISO)

Fanconi anemia (ISO)

Fanconi anemia complementation group C (ISO)

genetic disease (ISO)

hereditary breast ovarian cancer syndrome (ISO)

Hereditary Neoplastic Syndromes (ISO)

juvenile rheumatoid arthritis (ISO)

pre-malignant neoplasm (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2-hydroxypropanoic acid (ISO)

3,3',4,4',5-pentachlorobiphenyl (EXP)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

8-Br-cAMP (ISO)

acrolein (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

avobenzone (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

Butylbenzyl phthalate (ISO)

cadmium dichloride (ISO)

chromium(6+) (ISO)

cisplatin (EXP)

Cuprizon (EXP)

cyclosporin A (ISO)

diarsenic trioxide (ISO)

dibutyl phthalate (EXP)

dorsomorphin (ISO)

doxorubicin (ISO)

entinostat (ISO)

folic acid (ISO)

fulvestrant (ISO)

gentamycin (EXP)

glyphosate (EXP)

manganese(II) chloride (EXP)

methapyrilene (EXP,ISO)

methoxychlor (EXP)

methylmercury chloride (ISO)

Muraglitazar (EXP)

N,N-diethyl-m-toluamide (EXP)

nimesulide (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

permethrin (EXP)

potassium chromate (ISO)

rac-lactic acid (ISO)

raloxifene (ISO)

resveratrol (ISO)

rotenone (ISO)

SB 431542 (ISO)

sevoflurane (ISO)

sirolimus (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

thioacetamide (EXP)

thiram (ISO)

trichostatin A (ISO)

tris(2-butoxyethyl) phosphate (ISO)

troglitazone (EXP)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

proteolysis (IEA)

Cellular Component

nucleolus (IBA,IEA,ISO,ISS)

Molecular Function

aminopeptidase activity (IEA)

hydrolase activity (IEA)

metal ion binding (IEA)

metalloaminopeptidase activity (IEA)

metallopeptidase activity (IEA)

peptidase activity (IEA)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Identification of human aminopeptidase O, a novel metalloprotease with structural similarity to aminopeptidase B and leukotriene A4 hydrolase.	Diaz-Perales A, etal., J Biol Chem. 2005 Apr 8;280(14):14310-7. Epub 2005 Feb 1.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	GOA pipeline	RGD automated data pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:17803194

Genomics

Comparative Map Data

Aopep
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	1,817,001 - 2,133,008 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	1,817,001 - 2,133,104 (-)	Ensembl				GRCr8
mRatBN7.2	17	1,811,281 - 2,127,316 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	1,811,980 - 2,127,331 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	1,829,980 - 2,145,965 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	3,372,578 - 3,688,561 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	1,827,430 - 2,143,418 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	507,389 - 825,062 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	507,377 - 821,582 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	550,168 - 550,965 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Rnor_5.0	17	568,777 - 814,393 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	7,353,426 - 7,624,936 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	446,696 - 707,342 (+)	NCBI		Celera
RGSC_v3.1	17	7,353,425 - 7,624,936 (-)	NCBI
Cytogenetic Map	17	p14	NCBI

AOPEP
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	94,726,699 - 95,150,224 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	94,726,604 - 95,151,793 (+)	Ensembl			hg38	GRCh38
GRCh37	9	97,488,981 - 97,849,441 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	96,528,815 - 96,889,262 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	9	94,568,548 - 94,928,995	NCBI
Celera	9	67,929,905 - 68,290,531 (+)	NCBI		Celera
Cytogenetic Map	9	q22.32	NCBI
HuRef	9	67,097,489 - 67,459,053 (+)	NCBI		HuRef
CHM1_1	9	97,635,390 - 97,995,978 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	106,896,013 - 107,317,676 (+)	NCBI		T2T-CHM13v2.0

Aopep
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	63,112,707 - 63,473,910 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	63,112,707 - 63,473,910 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	13	62,964,893 - 63,326,096 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	62,964,893 - 63,326,096 (+)	Ensembl			mm10	GRCm38
MGSCv37	13	63,116,294 - 63,400,964 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	13	62,974,516 - 63,309,939 (+)	NCBI		MGSCv36	mm8
Celera	13	64,682,940 - 64,953,836 (+)	NCBI		Celera
Cytogenetic Map	13	B3	NCBI
cM Map	13	32.8	NCBI

Aopep
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	21,680,488 - 21,920,775 (+)	Ensembl
ChiLan1.0	NW_004955422	21,680,488 - 22,020,935 (+)	NCBI	ChiLan1.0	ChiLan1.0

AOPEP
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	44,299,187 - 44,728,355 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	44,301,567 - 44,730,736 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	65,825,138 - 66,188,001 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	93,953,844 - 94,315,510 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	93,986,951 - 94,311,201 (+)	Ensembl			panPan2	panpan1.1

AOPEP
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	71,770,687 - 72,009,374 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	71,677,068 - 72,009,395 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	72,438,651 - 72,771,366 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	71,981,049 - 72,313,890 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	71,981,051 - 72,313,868 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	71,792,454 - 72,124,878 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	71,556,523 - 71,890,575 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	72,262,807 - 72,595,715 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Aopep
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	4,466,607 - 4,745,317 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936626	3,667,123 - 3,970,433 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936626	3,704,474 - 3,973,913 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AOPEP
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	27,078,113 - 27,472,310 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	10	27,078,115 - 27,472,347 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	31,342,998 - 31,670,377 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

AOPEP
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	108,007,895 - 108,360,361 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	108,171,743 - 108,360,041 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666038	96,390,611 - 96,723,601 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Aopep
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624753	16,188,323 - 16,588,989 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Aopep
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	14	76,233,649 - 76,540,744 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Aopep
472 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	98
Count of miRNA genes:	87
Interacting mature miRNAs:	94
Transcripts:	ENSRNOT00000023638
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10401807	Kidm52	Kidney mass QTL 52			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	17	1	31706603	Rat
1354613	Kidm14	Kidney mass QTL 14	6.2		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	17	1	36045694	Rat
1354581	Bp247	Blood pressure QTL 247	4.5		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	17	1	43999106	Rat
1354662	Rf49	Renal function QTL 49	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	17	1	43999106	Rat
1354658	Spl8	Serum phospholipid level QTL 8	3.8		blood VLDL phospholipid amount (VT:0010507)	blood very low density lipoprotein phospholipid level (CMO:0001571)	17	1	43999106	Rat
1641902	Colcr7	Colorectal carcinoma resistance QTL 7	3.35	0.0044	intestine integrity trait (VT:0010554)	benign colorectal tumor surface area measurement (CMO:0001799)	17	2120843	22087569	Rat
2324619	Coatc4	Coat color QTL 4		0.001	coat/hair pigmentation trait (VT:0010463)	pigmented dorsal coat/hair area to total dorsal coat/hair area ratio (CMO:0001811)	17	1	21499218	Rat
1300123	Bp194	Blood pressure QTL 194	2.82		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	2120843	42054133	Rat
1549900	Iddm20	Insulin dependent diabetes mellitus QTL 20	3.7		pancreas integrity trait (VT:0010560)	percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)	17	1	22181410	Rat
9590316	Scort21	Serum corticosterone level QTL 21	4.75	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	17	1	22877318	Rat
631207	Niddm41	Non-insulin dependent diabetes mellitus QTL 41			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	17	1	38037084	Rat

Markers in Region

D17Got1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	1,957,814 - 1,958,035 (-)	MAPPER	mRatBN7.2
Rnor_6.0	17	677,347 - 677,567	NCBI	Rnor6.0
Rnor_5.0	17	671,509 - 671,729	UniSTS	Rnor5.0
RGSC_v3.4	17	7,505,126 - 7,505,347	RGD	RGSC3.4
RGSC_v3.4	17	7,505,127 - 7,505,347	UniSTS	RGSC3.4
Celera	17	565,615 - 565,835	UniSTS
RGSC_v3.1	17	7,505,127 - 7,505,347	RGD
RH 3.4 Map	17	0.0	RGD
RH 3.4 Map	17	0.0	UniSTS
Cytogenetic Map	17	p14	UniSTS

RH133549

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	1,831,529 - 1,831,709 (-)	MAPPER	mRatBN7.2
Rnor_6.0	17	805,275 - 805,454	NCBI	Rnor6.0
Rnor_5.0	17	798,088 - 798,267	UniSTS	Rnor5.0
RGSC_v3.4	17	7,369,552 - 7,369,731	UniSTS	RGSC3.4
Celera	17	691,037 - 691,216	UniSTS
RH 3.4 Map	17	21.3	UniSTS
Cytogenetic Map	17	p14	UniSTS

BF399621

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	2,011,959 - 2,012,089 (-)	MAPPER	mRatBN7.2
Rnor_6.0	17	623,260 - 623,389	NCBI	Rnor6.0
Rnor_5.0	17	617,422 - 617,551	UniSTS	Rnor5.0
RGSC_v3.4	17	7,559,715 - 7,559,844	UniSTS	RGSC3.4
Celera	17	511,519 - 511,648	UniSTS
RH 3.4 Map	17	16.0	UniSTS
Cytogenetic Map	17	p14	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	91	90	59	91	59	6	355	191	11	143	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001012346	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008771429	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008771431	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008771432	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600471	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600473	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276125	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276126	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276127	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276129	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276130	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276131	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276132	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276133	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010058813	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010058814	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010058815	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010058816	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AJ810421	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ209395	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ211205	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000023638 ⟹ ENSRNOP00000023638

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	1,817,001 - 2,133,104 (-)	Ensembl
mRatBN7.2 Ensembl	17	1,811,980 - 2,127,331 (-)	Ensembl
Rnor_6.0 Ensembl	17	507,377 - 821,582 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000129167 ⟹ ENSRNOP00000102309

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	1,817,001 - 2,132,979 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000153177 ⟹ ENSRNOP00000101943

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	1,817,001 - 2,132,979 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000160757 ⟹ ENSRNOP00000107620

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	1,817,001 - 2,132,979 (-)	Ensembl

RefSeq Acc Id:

NM_001012346 ⟹ NP_001012346

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	1,817,001 - 2,132,979 (-)	NCBI
mRatBN7.2	17	1,811,281 - 2,127,286 (-)	NCBI
Rnor_6.0	17	558,184 - 821,580 (+)	NCBI
Rnor_5.0	17	550,168 - 550,965 (+)	NCBI
Rnor_5.0	17	568,777 - 814,393 (+)	NCBI
RGSC_v3.4	17	7,353,426 - 7,624,936 (-)	RGD
Celera	17	446,696 - 707,342 (+)	RGD

Sequence:

show sequence

ATGGACATAAACCTGGACCCTTCTCGGGATGATCTGCCTCTCATGGCCAACACCAGCCACCTGC
TTGTGAAGCACTACGTACTGGATTTGGATGTGGACTTTGGAAGTCGAGTCCTTGAGGGCAACAT
AGTGCTTTTCTTTGGAGATGGAAACAGATGTAAAAAACAATCGAGTTCCTCCCAGGAAACCTTC
CAGATGGAGTCAGAGGAAGCCTACATACTTAGGACAGCTGAACCCTGCCATGTTCCAAAGATGG
ATTCAAATACTTTCTCACCTAAGATGGGACATAGAGAATTTGCAGTCTTTGGTAAAAGTGATCA
AGATGCCTTTGATAATGATGGTAACCATGACAACAAGGAACATGATTCTGAGAGCTCTAGCTCA
AAGTACTGCTGTGACACAGGGAATCATGGGAGAGAGGATTTCTTGCTAGTGTTGGACTGCTGTG
ATTTGTCTGTGCTAAAGGTAGAGGAGGTGGATGTAGCTGCTGTGCCAGATCTTGAGAAATTTAC
AAAAGCTCCAAACCTCACAGCTGCTCCTGAGAAGCGCAGGTGTGAGATTGTCCGTGACCTTGTG
GCTCTGCCTGCAGATGCTTGGAGGGAGCAGTTAGACTGCTACACTCGCTGCAGCCAGGCTCCTG
GCTGTGGGGAGCTCTTGTTTGACTCTGACAAGTGGAGCTTACAGATCAGGAAGAAGGGGGTTCC
GACAGCTGCTGACTTTCCTCATGCCATCAGGATATGGTATAAAACTAAACCTGAGGGGCAGTCA
GTGACTTGGACCTCAGACCAGGATGGCAGGCCATGTGTTTATACTATGGGATCCCCCATCAACA
ACAGGGCCCTTTTTCCATGCCAGGAACCACCGGTTGCCATGTCAACATGGCAGGCTACAGTTCG
AGCAGCTGCATCTTTTGTTGTTTTAATGAGTGGGGAAAAGTCTGCCAAGCCCACACCACTTCGA
GAAAGCTGGCATTACTATGTGACCATGCCAATGCCTGCCTCTACCTTCACAATTGCAGTGGGAT
GCTGGACAGAAATGAAGCCCAAGACATCCCCATTAGATGATCTGACTGAGCACACCCTCCCCCT
CCGACCATCAGACGCTGACTTCAGGTTTGTGTTTGGGAATTGCAGTCATATGGAATACCCCTGC
CGGTTCCAGAGTGCGTCTGCTGCCACCCAGAACATCATTCCTTATCGAGTGTTTGCCCCAGTGT
GCCTTGAGGGTGCCTGCCGAGAGGCCCTGCTGTGGCTGATCCCCTCTTGCCTCTCAGCTGCACA
CTCTGTCCTGGGAACACACCCTTTCTCCAGGCTGGACATACTTATTGTCCCCACCAACTTCCCA
AGTCTGGGAATGGCCAGCCCACACATCATCTTCCTCTCTCAGAGCACCTTGACAGGCACAAGCC
ATCTCTGCGGGACCCGTCTTTGCCATGAAATTGCTCATGCCTGGTTTGGCCTAGCCATAGGGGC
CCGAGACTGGACAGAGGAGTGGCTCAGCGAAGGATTTGCCACTCACTTGGAAGATATATTTTGG
GCTGAAGCACAGCAGCTGCCCCCACATGAGGCCCTGGAGCAGCAAGAGCTGAGGGCTTGCCTGC
GCTGGCACCGCCTGCAGGATGAGCTTCAGAACTCCCCAGAGGGAATGCAGGTGTTAAGACCCAA
CAAAGAGAAGACTGGTCACGTGAGTGCTTCAGGTGCCTCTGTTGTCAAGAATGGACTCAACCCA
GAGAAGGGCTTCATGCAGGTTCATTACTTAAAGGGCTACTTCCTTCTTCGATTCCTAGCCAGAA
CACTTGGAGAGGAAACTTATTTTCCATTTTTAAGAAAATTTGTGCACCTGTTTCATGGGCAGTT
GATTCTTTCCCAGGATTTTCTTCAAATGCTGTTGGAGAGCATTCCAGAAAACAAAAGGTTCGGC
CTGTCTGTTGAGAACATCGTCGGTGATTGGCTTGAGTGTCCCGGAATACCCAAGGCACTGCAGG
AGGAGCGCAAGGCCAAGGACTGCTCGCCGAGTAGGCTGGTACGGCAGGTGGCCAAATGGATTCG
AGTGAACCGAAGACCCGGAAAACGCCAACGAAGGAAACGTGAAGCCGCCTTTGAAAAGCTTTCT
CCAGACCAGATCGTGTTGCTTTTGGAGTGGCTCTTAGAGCAGAAGACCCTGAGCCCCCAGACAT
TGCATCGTCTCCAGCAGACGTACCATCTCCAGGAGCAGGATGCAGAGGTTCGCCATCGATGGTG
TGAACTGGTTATTAAGCACAAGTACACAAAGGCATATGATCAGGTCAAGAGGTTCCTACAGGAG
GATCAGGCCATGGGCATATACCTCTACGGGGAGCTGATGGTGAGTGAGGATGCCAGGCTGCAGC
AGCTTGCCCACCGGTGCTTTGAGCTGGTAAAGGGACACATGGACAAAGCATCCGCCCAGGTGGT
GACCGAAATGCTGTTCTAA

hide sequence

RefSeq Acc Id:

XM_008771429 ⟹ XP_008769651

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	1,817,637 - 2,133,002 (-)	NCBI
mRatBN7.2	17	1,811,922 - 2,127,306 (-)	NCBI
Rnor_6.0	17	507,389 - 825,062 (+)	NCBI

Sequence:

show sequence

CCGTGGTAACCCGGAGTCTGCGGAAGTGTAGCTGCAGCACGGTGGCCGACAGGTAACCCGCAGC
TCGGCTGTCAACCAGCCACTCCGGGTTATGGGGATCGGCGACCTCTGATGAGGTGAGCAGGGAG
CAGAGGAAGTACCGAGTGGATGTATTCTGTTGACATGGACACAGACATGACAAGGACCTTCAGA
ACTATGAGAACTGACAAAACCTTTCACCGTATATATGTATGGGTCAGGGTTAAAGTTGACACAG
AGCCTTCTTCCTCTGGTACAAGGAATTGGAAGTTGTGGAAAGACAACCTATGCCAGTGGGTGCT
TCTTATTTGGTAAGCCAGCCATTTGTGATTCTGAGCTGCTAGAGGAGATAAGAAGCCTCAGCTG
CGATTCAGCAAAGCTACCAACTGCAAACTACACCATGGACATAAACCTGGACCCTTCTCGGGAT
GATCTGCCTCTCATGGCCAACACCAGCCACCTGCTTGTGAAGCACTACGTACTGGATTTGGATG
TGGACTTTGGAAGTCGAGTCCTTGAGGGCAACATAGTGCTTTTCTTTGGAGATGGAAACAGATG
TAAAAAACAATCGAGTTCCTCCCAGGAAACCTTCCAGATGGAGTCAGAGGAAGCCTACATACTT
AGGACAGCTGAACCCTGCCATGTTCCAAAGATGGATTCAAATACTTTCTCACCTAAGATGGGAC
ATAGAGAATTTGCAGTCTTTGGTAAAAGTGATCAAGATGCCTTTGATAATGATGGTAACCATGA
CAACAAGGAACATGATTCTGAGAGCTCTAGCTCAAAGTACTGCTGTGACACAGGGAATCATGGG
AGAGAGGATTTCTTGCTAGTGTTGGACTGCTGTGATTTGTCTGTGCTAAAGGTAGAGGAGGTGG
ATGTAGCTGCTGTGCCAGATCTTGAGAAATTTACAAAAGCTCCAAACCTCACAGCTGCTCCTGA
GAAGCGCAGGTGTGAGATTGTCCGTGACCTTGTGGCTCTGCCTGCAGATGCTTGGAGGGAGCAG
TTAGACTGCTACACTCGCTGCAGCCAGGCTCCTGGCTGTGGGGAGCTCTTGTTTGACTCTGACA
AGTGGAGCTTACAGATCAGGAAGAAGGGGGTTCCGACAGCTGCTGACTTTCCTCATGCCATCAG
GATATGGTATAAAACTAAACCTGAGGGGCAGTCAGTGACTTGGACCTCAGACCAGGATGGCAGG
CCATGTGTTTATACTATGGGATCCCCCATCAACAACAGGGCCCTTTTTCCATGCCAGGAACCAC
CGGTTGCCATGTCAACATGGCAGGCTACAGTTCGAGCAGCTGCATCTTTTGTTGTTTTAATGAG
TGGGGAAAAGTCTGCCAAGCCCACACCACTTCGAGAAGGATACATGAGCTGGCATTACTATGTG
ACCATGCCAATGCCTGCCTCTACCTTCACAATTGCAGTGGGATGCTGGACAGAAATGAAGCCCA
AGACATCCCCATTAGATGATCTGACTGAGCACACCCTCCCCCTCCGACCATCAGACGCTGACTT
CAGGTATGGTAACACCTGCAGTCATATGGAATACCCCTGCCGGTTCCAGAGTGCGTCTGCTGCC
ACCCAGAACATCATTCCTTATCGAGTGTTTGCCCCAGTGTGCCTTGAGGGTGCCTGCCGAGAGG
CCCTGCTGTGGCTGATCCCCTCTTGCCTCTCAGCTGCACACTCTGTCCTGGGAACACACCCTTT
CTCCAGGCTGGACATACTTATTGTCCCCACCAACTTCCCAAGTCTGGGAATGGCCAGCCCACAC
ATCATCTTCCTCTCTCAGAGCACCTTGACAGGCACAAGCCATCTCTGCGGGACCCGTCTTTGCC
ATGAAATTGCTCATGCCTGGTTTGGCCTAGCCATAGGGGCCCGAGACTGGACAGAGGAGTGGCT
CAGCGAAGGATTTGCCACTCACTTGGAAGATATATTTTGGGCTGAAGCACAGCAGCTGCCCCCA
CATGAGGCCCTGGAGCAGCAAGAGCTGAGGGCTTGCCTGCGCTGGCACCGCCTGCAGGATGAGC
TTCAGAACTCCCCAGAGGGAATGCAGGTGTTAAGACCCAACAAAGAGAAGACTGGTCACGTGAG
TGCTTCAGGTGCCTCTGTTGTCAAGAATGGACTCAACCCAGAGAAGGGCTTCATGCAGGTTCAT
TACTTAAAGGGCTACTTCCTTCTTCGATTCCTAGCCAGAACACTTGGAGAGGAAACTTATTTTC
CATTTTTAAGAAAATTTGTGCACCTGTTTCATGGGCAGTTGATTCTTTCCCAGGATTTTCTTCA
AATGCTGTTGGAGAGCATTCCAGAAAACAAAAGGTTCGGCCTGTCTGTTGAGAACATCGTCGGT
GATTGGCTTGAGTGTCCCGGAATACCCAAGGCACTGCAGGAGGAGCGCAAGGCCAAGGACTGCT
CGCCGAGTAGGCTGGTACGGCAAGTGGGCTCCGAGGTGGCCAAATGGATTCGAGTGAACCGAAG
ACCCGGAAAACGCCAACGAAGGAAACGTGAAGCCGCCTTTGAAAAGCTTTCTCCAGACCAGATC
GTGTTGCTTTTGGAGTGGCTCTTAGAGCAGAAGACCCTGAGCCCCCAGACATTGCATCGTCTCC
AGCAGACGTACCATCTCCAGGAGCAGGATGCAGAGGTTCGCCATCGATGGTGTGAACTGGTTAT
TAAGCACAAGTACACAAAGGCATATGATCAGGTCAAGAGGTTCCTACAGGAGGATCAGGCCATG
GGCATATACCTCTACGGGGAGCTGATGGTGAGTGAGGATGCCAGGCTGCAGCAGCTTGCCCACC
GGTGCTTTGAGCTGGTAAAGGGACACATGGACAAAGCATCCGCCCAGGTGGTGACCGAAATGCT
GTTCTAAAGAGGTAATTTTCTTTCTTTCTCCTCCTAACCCTCCATGTTGATTTGAAAGCCACAG
ATGAGCCAAGGCCGCCACAGCACCAGAGGGCTGCCAAGCGGTCTTGGGGAGCAAGCAGGGTGGG
TCCCCAAGAACAGGAAGGCTCAGGATCTCTGGAGCCACCTCGTCTTCTGGATATACTGGTGTAA
AACAGGTTCCTACTAAAGGAGGAACAGCCCCCTGGTACCTTGGATTCTGCACAGATCCACAGGC
TTCTCAGGGTCAAGGTCAGCACAGTGGTCCGCAGCCTCGCTGCTCCAAGCTTCGGCCTGCAGGC
GTTTCTCCTAGAGGCTGTGTAAACCTGAGACTCCTTGGCCTCTTGTCTCCCCGACCTGTAAAGT
AGGCAGCAGCGTGTTCTTACACATCCCCCTTGCTCAGTGACCGGTGAGGTAGACAGCAGGTCTT
CTTTGCCTGTCCACCCAGGTGACACTGGCATCCTAAGGGCAAGTCTGTTTCCATCTGGTGCTGG
AACAGGGTTTACCCTGGCTCCCAGAGTCCTTGCCTGTGCTGTTACCTTCCCCCTCTAGCCAACT
TGTTGACCAGTAGTGTAGTTGAGCCACAAAGCATGGAGTTCTGGGACACAAGTGTGGGTTAGTG
TGTTTCTTTCACAGTCATGTCATCTCTGCATCTTCTTTCTCAGTTATTGTCATGGTGGTACATA
TGATGTTTACTTTTCGTATATTTTTTAAATTTTACATCAATCACTGTGTTACTGTTGTTCTCTG
TGAGTACTATTATGAATGTTTAGAATTGTGTTGCTAATCTTAACTCTTGGTCAGGCATTAAATT
TACATTTTCACATTTCACTTTTACAAAACCCACTCCTGTGTACTATGTTTATTTTGTTTATGTG
AAAGAACTAATCTTATGAAGGGGAAGCATGTTTACTGAAATATGATGGTGTTCTTGCGGAAATG
CTGGGGACCGCCATAGTTGAGCAGAGGAGAGTGTGGGGTGGAGTAAGCCTGCACACCACGACCT
AGGACGGTGGCCTGTGCAAGCAGGCAGGTTCGGCTGGGCTCCTCTCCACTGCCTGCTGCAGGCA
TTTCTCTAGGAACTTGTAAGCTCAGGGATTGTTGGTGTGGTGTGTAAGGTCACAATAAAGCCAC
TATTCTGTCTTCCGGTCCTTTGGCCTTCACTTTGGAGAGCCAGAGTCAGATAGTGGTACGAGCG
ACTCTTCTAAGGGTATTTTTGGCCCCTGTGCAAGCAAATCCTCAACTTCCAAGCTCCCCTGAGA
ACTCTATGCTGTACCCCAGCTCATCCAACCAAATGCTTGGTCACAGCAGCTCCAGAAACTCTCT
GCACACCATGCCTACTGAGAAGAGTTTCCTATCCAAGGGGCCCATAGACATCTCAGGCCATTAA
AAATCTGCAGTTTGAGAACAGGGTGTGTCCCCAGGGTTAAAGGTCACATACTCAGAGCGAGGAT
TGGTCATGTAGCTGATAAGTGTGTCCTTTGTCTCCTGGTTCCCTATGCTCCTCTATACAGTGCA
GCTAGCATGCTGGATGACAGCAGGCTACATACACTGCTAGCGTGGTGGGCTCAGAGGCGGTGTG
GAGGACACTCAGCGCATGTGGATGGGAGTGGTTGGGCATGGCGCTGCCCTCACCTGCTCTGGCT
GCTTGGGTTCCTGGCATGCTGATTTGTGACTTGAGATTAAAATCACATTGCCAGGGATTACCAC
GCAACCATGACCTTGGCTGCTCCTGCAGAACCGTGGCTACTTTCTCTCTGCAGTTTGGAGAACA
GAGGCACCTTGTGGCTCTTTGGGAAAAAAAAAAAAAAAAAAGAAGCCACCAGCCTTCGAAGATG
CTCACCAGCCCTTTAATTATGGCCGGCGATGACCTCTCTAACAAGGTGCAGAGCTTAGCTGATT
GGTGAACAGTGATTGGTTTCCGCTTTGTTCACAGTGGCTAAGTTCTGCACCTGAAGAGAAGGTG
AGATGGGGACAGTTAACTTGCAGCTGCCAGGCAGAGGCCACTGCCTGGTGGTCACTCCAGAGGA
GGAGAGACCAGCCTGCCTCAAGGCTGTGTTGTCAAGAGTGCAAGCAGCGTGCTGACCACCCTTA
AATGTGCCTACAGAAAATACAGATCTACTGCTAATTAGTCCACTGTAATATCAAGTGTATTGGA
GTCACAGAAAACTAAAACCAGATGCATCACAAAAGCTGAGCGGAGTCTCAGCTGATGCCACACG
TGAGGGTGGGGTTGGGGGTGGTTCTTTTGTCCCTGCTGGGCGTGGTGAACTCTTTCTTGTATTT
GCAGTCCAGGTCTCCATGTCTTCACAGTCGCTGGCAGGATGATGCCCAGGGCACGCCAGGAGGC
ACTGCCCAGCTGTGATTGGACCCGCCCTCCGGTGCCTACTGAGCTGATATCAGTTCTCATTTCA
CACACTGGCTCAGTTCAGCAGGAACAGGAGTCGAGCCCTTGAGCAAAAAGCCTACCCATCTGTA
AGTGCCTGAGGCAGGCCTCCCACGGACAAGAAGATGAAGGGCCTTGAGTGTCTGGTACCAGACC
CAACAGCAGTGGTATCCCTCTGTATGTGCTCTTGAGGTGGGGATTTATAGAGTGCAGATCAAAC
TTTGGAAAGATTGCATTCCCTAGAAGTAAGGCAGAGCAGAAGCCGAGCGTTTGCCATGTGTTTG
AGACAGAGCACACCCTGTTGTCTGCTGCCTTGAGCAGTGTGAATGCTGTCTTAAGGGCTTTCTG
TAGAGCCGCCTTCCATTGAATCTCTCTGGGCTTCACAGCCCTGCATGGCCTATGCTGTGACTGT
GCACCCCAGGTCGAGGATTGTGAGGCGTGGCTTCAGTCTTGTCCCTGTCCTCCCTGAAAGTTCC
CTCTCAAGTGGAGGTCAGAGGCTAGGAGAACTCCTGTCAGAATGACTGTGGTGACTGGGTAATA
AATTTTATTGCTGTTTCCTTCACAGGACAGATCACAGTGAGATTCTCTTTCATACACCTTCTCC
TAGCCCTGGTGGGGCCAGGACTGCATTGACCCTGGACATCAAAGGGAAGATTATGTGGCTGCTA
AGGCCATCAGCCCACAGCAGCGGTTGGTCCAGCTTGGGCTTCTGGCTCCCAGAGCCCGGGCTCC
CGTGGCATATATAAAAGGCGGAGCCTCATAAACTGTTGCACCTGGCAGCTGCCTTTGTCCCCAG
TCCTAGAGACCGAGTCTACACACTGGAATTGAGCTGTGACTTGAAGGCAGTCCTTCAAAAGAAT
GAAGGATACCCTCCCCTAGGCAGATGGAGAACCGACTGCCTGCTTCCTGTGATTGCAAGCACTA
GCTGCCATGCTCTGGGACTGCAGAATCACATGACACCTCCTGTGGCTGGCCCCCAAGGACTCTG
CAGAGACCCTTTGATGTGTTCAGTCAATAGAGCATTCCTGTTTTTGAAAATGCAGGGAAGCCTA
AGATGTCTTAATAAAGTACCGGATTTGCTGGTG

hide sequence

RefSeq Acc Id:

XM_008771431 ⟹ XP_008769653

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	1,817,637 - 2,133,007 (-)	NCBI
mRatBN7.2	17	1,811,922 - 2,127,315 (-)	NCBI
Rnor_6.0	17	507,389 - 825,062 (+)	NCBI

Sequence:

show sequence

CCGTGGTAACCCGGAGTCTGCGGAAGTGTAGCTGCAGCACGGTGGCCGACAGGTAACCCGCAGC
TCGGCTGTCAACCAGCCACTCCGGGTTATGGGGATCGGCGACCTCTGATGAGGTGAGCAGGGAA
TTGGAAGTTGTGGAAAGACAACCTATGCCAGTGGGTGCTTCTTATTTGGTAAGCCAGCCATTTG
TGATTCTGAGCTGCTAGAGGAGATAAGAAGCCTCAGCTGCGATTCAGCAAAGCTACCAACTGCA
AACTACACCATGGACATAAACCTGGACCCTTCTCGGGATGATCTGCCTCTCATGGCCAACACCA
GCCACCTGCTTGTGAAGCACTACGTACTGGATTTGGATGTGGACTTTGGAAGTCGAGTCCTTGA
GGGCAACATAGTGCTTTTCTTTGGAGATGGAAACAGATGTAAAAAACAATCGAGTTCCTCCCAG
GAAACCTTCCAGATGGAGTCAGAGGAAGCCTACATACTTAGGACAGCTGAACCCTGCCATGTTC
CAAAGATGGATTCAAATACTTTCTCACCTAAGATGGGACATAGAGAATTTGCAGTCTTTGGTAA
AAGTGATCAAGATGCCTTTGATAATGATGGTAACCATGACAACAAGGAACATGATTCTGAGAGC
TCTAGCTCAAAGTACTGCTGTGACACAGGGAATCATGGGAGAGAGGATTTCTTGCTAGTGTTGG
ACTGCTGTGATTTGTCTGTGCTAAAGGTAGAGGAGGTGGATGTAGCTGCTGTGCCAGATCTTGA
GAAATTTACAAAAGCTCCAAACCTCACAGCTGCTCCTGAGAAGCGCAGGTGTGAGATTGTCCGT
GACCTTGTGGCTCTGCCTGCAGATGCTTGGAGGGAGCAGTTAGACTGCTACACTCGCTGCAGCC
AGGCTCCTGGCTGTGGGGAGCTCTTGTTTGACTCTGACAAGTGGAGCTTACAGATCAGGAAGAA
GGGGGTTCCGACAGCTGCTGACTTTCCTCATGCCATCAGGATATGGTATAAAACTAAACCTGAG
GGGCAGTCAGTGACTTGGACCTCAGACCAGGATGGCAGGCCATGTGTTTATACTATGGGATCCC
CCATCAACAACAGGGCCCTTTTTCCATGCCAGGAACCACCGGTTGCCATGTCAACATGGCAGGC
TACAGTTCGAGCAGCTGCATCTTTTGTTGTTTTAATGAGTGGGGAAAAGTCTGCCAAGCCCACA
CCACTTCGAGAAGGATACATGAGCTGGCATTACTATGTGACCATGCCAATGCCTGCCTCTACCT
TCACAATTGCAGTGGGATGCTGGACAGAAATGAAGCCCAAGACATCCCCATTAGATGATCTGAC
TGAGCACACCCTCCCCCTCCGACCATCAGACGCTGACTTCAGGTATGGTAACACCTGCAGTCAT
ATGGAATACCCCTGCCGGTTCCAGAGTGCGTCTGCTGCCACCCAGAACATCATTCCTTATCGAG
TGTTTGCCCCAGTGTGCCTTGAGGGTGCCTGCCGAGAGGCCCTGCTGTGGCTGATCCCCTCTTG
CCTCTCAGCTGCACACTCTGTCCTGGGAACACACCCTTTCTCCAGGCTGGACATACTTATTGTC
CCCACCAACTTCCCAAGTCTGGGAATGGCCAGCCCACACATCATCTTCCTCTCTCAGAGCACCT
TGACAGGCACAAGCCATCTCTGCGGGACCCGTCTTTGCCATGAAATTGCTCATGCCTGGTTTGG
CCTAGCCATAGGGGCCCGAGACTGGACAGAGGAGTGGCTCAGCGAAGGATTTGCCACTCACTTG
GAAGATATATTTTGGGCTGAAGCACAGCAGCTGCCCCCACATGAGGCCCTGGAGCAGCAAGAGC
TGAGGGCTTGCCTGCGCTGGCACCGCCTGCAGGATGAGCTTCAGAACTCCCCAGAGGGAATGCA
GGTGTTAAGACCCAACAAAGAGAAGACTGGTCACGTGAGTGCTTCAGGTGCCTCTGTTGTCAAG
AATGGACTCAACCCAGAGAAGGGCTTCATGCAGGTTCATTACTTAAAGGGCTACTTCCTTCTTC
GATTCCTAGCCAGAACACTTGGAGAGGAAACTTATTTTCCATTTTTAAGAAAATTTGTGCACCT
GTTTCATGGGCAGTTGATTCTTTCCCAGGATTTTCTTCAAATGCTGTTGGAGAGCATTCCAGAA
AACAAAAGGTTCGGCCTGTCTGTTGAGAACATCGTCGGTGATTGGCTTGAGTGTCCCGGAATAC
CCAAGGCACTGCAGGAGGAGCGCAAGGCCAAGGACTGCTCGCCGAGTAGGCTGGTACGGCAAGT
GGGCTCCGAGGTGGCCAAATGGATTCGAGTGAACCGAAGACCCGGAAAACGCCAACGAAGGAAA
CGTGAAGCCGCCTTTGAAAAGCTTTCTCCAGACCAGATCGTGTTGCTTTTGGAGTGGCTCTTAG
AGCAGAAGACCCTGAGCCCCCAGACATTGCATCGTCTCCAGCAGACGTACCATCTCCAGGAGCA
GGATGCAGAGGTTCGCCATCGATGGTGTGAACTGGTTATTAAGCACAAGTACACAAAGGCATAT
GATCAGGTCAAGAGGTTCCTACAGGAGGATCAGGCCATGGGCATATACCTCTACGGGGAGCTGA
TGGTGAGTGAGGATGCCAGGCTGCAGCAGCTTGCCCACCGGTGCTTTGAGCTGGTAAAGGGACA
CATGGACAAAGCATCCGCCCAGGTGGTGACCGAAATGCTGTTCTAAAGAGGTAATTTTCTTTCT
TTCTCCTCCTAACCCTCCATGTTGATTTGAAAGCCACAGATGAGCCAAGGCCGCCACAGCACCA
GAGGGCTGCCAAGCGGTCTTGGGGAGCAAGCAGGGTGGGTCCCCAAGAACAGGAAGGCTCAGGA
TCTCTGGAGCCACCTCGTCTTCTGGATATACTGGTGTAAAACAGGTTCCTACTAAAGGAGGAAC
AGCCCCCTGGTACCTTGGATTCTGCACAGATCCACAGGCTTCTCAGGGTCAAGGTCAGCACAGT
GGTCCGCAGCCTCGCTGCTCCAAGCTTCGGCCTGCAGGCGTTTCTCCTAGAGGCTGTGTAAACC
TGAGACTCCTTGGCCTCTTGTCTCCCCGACCTGTAAAGTAGGCAGCAGCGTGTTCTTACACATC
CCCCTTGCTCAGTGACCGGTGAGGTAGACAGCAGGTCTTCTTTGCCTGTCCACCCAGGTGACAC
TGGCATCCTAAGGGCAAGTCTGTTTCCATCTGGTGCTGGAACAGGGTTTACCCTGGCTCCCAGA
GTCCTTGCCTGTGCTGTTACCTTCCCCCTCTAGCCAACTTGTTGACCAGTAGTGTAGTTGAGCC
ACAAAGCATGGAGTTCTGGGACACAAGTGTGGGTTAGTGTGTTTCTTTCACAGTCATGTCATCT
CTGCATCTTCTTTCTCAGTTATTGTCATGGTGGTACATATGATGTTTACTTTTCGTATATTTTT
TAAATTTTACATCAATCACTGTGTTACTGTTGTTCTCTGTGAGTACTATTATGAATGTTTAGAA
TTGTGTTGCTAATCTTAACTCTTGGTCAGGCATTAAATTTACATTTTCACATTTCACTTTTACA
AAACCCACTCCTGTGTACTATGTTTATTTTGTTTATGTGAAAGAACTAATCTTATGAAGGGGAA
GCATGTTTACTGAAATATGATGGTGTTCTTGCGGAAATGCTGGGGACCGCCATAGTTGAGCAGA
GGAGAGTGTGGGGTGGAGTAAGCCTGCACACCACGACCTAGGACGGTGGCCTGTGCAAGCAGGC
AGGTTCGGCTGGGCTCCTCTCCACTGCCTGCTGCAGGCATTTCTCTAGGAACTTGTAAGCTCAG
GGATTGTTGGTGTGGTGTGTAAGGTCACAATAAAGCCACTATTCTGTCTTCCGGTCCTTTGGCC
TTCACTTTGGAGAGCCAGAGTCAGATAGTGGTACGAGCGACTCTTCTAAGGGTATTTTTGGCCC
CTGTGCAAGCAAATCCTCAACTTCCAAGCTCCCCTGAGAACTCTATGCTGTACCCCAGCTCATC
CAACCAAATGCTTGGTCACAGCAGCTCCAGAAACTCTCTGCACACCATGCCTACTGAGAAGAGT
TTCCTATCCAAGGGGCCCATAGACATCTCAGGCCATTAAAAATCTGCAGTTTGAGAACAGGGTG
TGTCCCCAGGGTTAAAGGTCACATACTCAGAGCGAGGATTGGTCATGTAGCTGATAAGTGTGTC
CTTTGTCTCCTGGTTCCCTATGCTCCTCTATACAGTGCAGCTAGCATGCTGGATGACAGCAGGC
TACATACACTGCTAGCGTGGTGGGCTCAGAGGCGGTGTGGAGGACACTCAGCGCATGTGGATGG
GAGTGGTTGGGCATGGCGCTGCCCTCACCTGCTCTGGCTGCTTGGGTTCCTGGCATGCTGATTT
GTGACTTGAGATTAAAATCACATTGCCAGGGATTACCACGCAACCATGACCTTGGCTGCTCCTG
CAGAACCGTGGCTACTTTCTCTCTGCAGTTTGGAGAACAGAGGCACCTTGTGGCTCTTTGGGAA
AAAAAAAAAAAAAAAAGAAGCCACCAGCCTTCGAAGATGCTCACCAGCCCTTTAATTATGGCCG
GCGATGACCTCTCTAACAAGGTGCAGAGCTTAGCTGATTGGTGAACAGTGATTGGTTTCCGCTT
TGTTCACAGTGGCTAAGTTCTGCACCTGAAGAGAAGGTGAGATGGGGACAGTTAACTTGCAGCT
GCCAGGCAGAGGCCACTGCCTGGTGGTCACTCCAGAGGAGGAGAGACCAGCCTGCCTCAAGGCT
GTGTTGTCAAGAGTGCAAGCAGCGTGCTGACCACCCTTAAATGTGCCTACAGAAAATACAGATC
TACTGCTAATTAGTCCACTGTAATATCAAGTGTATTGGAGTCACAGAAAACTAAAACCAGATGC
ATCACAAAAGCTGAGCGGAGTCTCAGCTGATGCCACACGTGAGGGTGGGGTTGGGGGTGGTTCT
TTTGTCCCTGCTGGGCGTGGTGAACTCTTTCTTGTATTTGCAGTCCAGGTCTCCATGTCTTCAC
AGTCGCTGGCAGGATGATGCCCAGGGCACGCCAGGAGGCACTGCCCAGCTGTGATTGGACCCGC
CCTCCGGTGCCTACTGAGCTGATATCAGTTCTCATTTCACACACTGGCTCAGTTCAGCAGGAAC
AGGAGTCGAGCCCTTGAGCAAAAAGCCTACCCATCTGTAAGTGCCTGAGGCAGGCCTCCCACGG
ACAAGAAGATGAAGGGCCTTGAGTGTCTGGTACCAGACCCAACAGCAGTGGTATCCCTCTGTAT
GTGCTCTTGAGGTGGGGATTTATAGAGTGCAGATCAAACTTTGGAAAGATTGCATTCCCTAGAA
GTAAGGCAGAGCAGAAGCCGAGCGTTTGCCATGTGTTTGAGACAGAGCACACCCTGTTGTCTGC
TGCCTTGAGCAGTGTGAATGCTGTCTTAAGGGCTTTCTGTAGAGCCGCCTTCCATTGAATCTCT
CTGGGCTTCACAGCCCTGCATGGCCTATGCTGTGACTGTGCACCCCAGGTCGAGGATTGTGAGG
CGTGGCTTCAGTCTTGTCCCTGTCCTCCCTGAAAGTTCCCTCTCAAGTGGAGGTCAGAGGCTAG
GAGAACTCCTGTCAGAATGACTGTGGTGACTGGGTAATAAATTTTATTGCTGTTTCCTTCACAG
GACAGATCACAGTGAGATTCTCTTTCATACACCTTCTCCTAGCCCTGGTGGGGCCAGGACTGCA
TTGACCCTGGACATCAAAGGGAAGATTATGTGGCTGCTAAGGCCATCAGCCCACAGCAGCGGTT
GGTCCAGCTTGGGCTTCTGGCTCCCAGAGCCCGGGCTCCCGTGGCATATATAAAAGGCGGAGCC
TCATAAACTGTTGCACCTGGCAGCTGCCTTTGTCCCCAGTCCTAGAGACCGAGTCTACACACTG
GAATTGAGCTGTGACTTGAAGGCAGTCCTTCAAAAGAATGAAGGATACCCTCCCCTAGGCAGAT
GGAGAACCGACTGCCTGCTTCCTGTGATTGCAAGCACTAGCTGCCATGCTCTGGGACTGCAGAA
TCACATGACACCTCCTGTGGCTGGCCCCCAAGGACTCTGCAGAGACCCTTTGATGTGTTCAGTC
AATAGAGCATTCCTGTTTTTGAAAATGCAGGGAAGCCTAAGATGTCTTAATAAAGTACCGGATT
TGCTGGTG

hide sequence

RefSeq Acc Id:

XM_008771432 ⟹ XP_008769654

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	1,817,637 - 2,133,006 (-)	NCBI
mRatBN7.2	17	1,811,922 - 2,127,316 (-)	NCBI
Rnor_6.0	17	507,389 - 825,062 (+)	NCBI

Sequence:

show sequence

CCGTGGTAACCCGGAGTCTGCGGAAGTGTAGCTGCAGCACGGTGGCCGACAGGTAACCCGCAGC
TCGGCTGTCAACCAGCCACTCCGGGTTATGGGGATCGGCGACCTCTGATGAGGGAATTGGAAGT
TGTGGAAAGACAACCTATGCCAGTGGGTGCTTCTTATTTGGTAAGCCAGCCATTTGTGATTCTG
AGCTGCTAGAGGAGATAAGAAGCCTCAGCTGCGATTCAGCAAAGCTACCAACTGCAAACTACAC
CATGGACATAAACCTGGACCCTTCTCGGGATGATCTGCCTCTCATGGCCAACACCAGCCACCTG
CTTGTGAAGCACTACGTACTGGATTTGGATGTGGACTTTGGAAGTCGAGTCCTTGAGGGCAACA
TAGTGCTTTTCTTTGGAGATGGAAACAGATGTAAAAAACAATCGAGTTCCTCCCAGGAAACCTT
CCAGATGGAGTCAGAGGAAGCCTACATACTTAGGACAGCTGAACCCTGCCATGTTCCAAAGATG
GATTCAAATACTTTCTCACCTAAGATGGGACATAGAGAATTTGCAGTCTTTGGTAAAAGTGATC
AAGATGCCTTTGATAATGATGGTAACCATGACAACAAGGAACATGATTCTGAGAGCTCTAGCTC
AAAGTACTGCTGTGACACAGGGAATCATGGGAGAGAGGATTTCTTGCTAGTGTTGGACTGCTGT
GATTTGTCTGTGCTAAAGGTAGAGGAGGTGGATGTAGCTGCTGTGCCAGATCTTGAGAAATTTA
CAAAAGCTCCAAACCTCACAGCTGCTCCTGAGAAGCGCAGGTGTGAGATTGTCCGTGACCTTGT
GGCTCTGCCTGCAGATGCTTGGAGGGAGCAGTTAGACTGCTACACTCGCTGCAGCCAGGCTCCT
GGCTGTGGGGAGCTCTTGTTTGACTCTGACAAGTGGAGCTTACAGATCAGGAAGAAGGGGGTTC
CGACAGCTGCTGACTTTCCTCATGCCATCAGGATATGGTATAAAACTAAACCTGAGGGGCAGTC
AGTGACTTGGACCTCAGACCAGGATGGCAGGCCATGTGTTTATACTATGGGATCCCCCATCAAC
AACAGGGCCCTTTTTCCATGCCAGGAACCACCGGTTGCCATGTCAACATGGCAGGCTACAGTTC
GAGCAGCTGCATCTTTTGTTGTTTTAATGAGTGGGGAAAAGTCTGCCAAGCCCACACCACTTCG
AGAAGGATACATGAGCTGGCATTACTATGTGACCATGCCAATGCCTGCCTCTACCTTCACAATT
GCAGTGGGATGCTGGACAGAAATGAAGCCCAAGACATCCCCATTAGATGATCTGACTGAGCACA
CCCTCCCCCTCCGACCATCAGACGCTGACTTCAGGTATGGTAACACCTGCAGTCATATGGAATA
CCCCTGCCGGTTCCAGAGTGCGTCTGCTGCCACCCAGAACATCATTCCTTATCGAGTGTTTGCC
CCAGTGTGCCTTGAGGGTGCCTGCCGAGAGGCCCTGCTGTGGCTGATCCCCTCTTGCCTCTCAG
CTGCACACTCTGTCCTGGGAACACACCCTTTCTCCAGGCTGGACATACTTATTGTCCCCACCAA
CTTCCCAAGTCTGGGAATGGCCAGCCCACACATCATCTTCCTCTCTCAGAGCACCTTGACAGGC
ACAAGCCATCTCTGCGGGACCCGTCTTTGCCATGAAATTGCTCATGCCTGGTTTGGCCTAGCCA
TAGGGGCCCGAGACTGGACAGAGGAGTGGCTCAGCGAAGGATTTGCCACTCACTTGGAAGATAT
ATTTTGGGCTGAAGCACAGCAGCTGCCCCCACATGAGGCCCTGGAGCAGCAAGAGCTGAGGGCT
TGCCTGCGCTGGCACCGCCTGCAGGATGAGCTTCAGAACTCCCCAGAGGGAATGCAGGTGTTAA
GACCCAACAAAGAGAAGACTGGTCACGTGAGTGCTTCAGGTGCCTCTGTTGTCAAGAATGGACT
CAACCCAGAGAAGGGCTTCATGCAGGTTCATTACTTAAAGGGCTACTTCCTTCTTCGATTCCTA
GCCAGAACACTTGGAGAGGAAACTTATTTTCCATTTTTAAGAAAATTTGTGCACCTGTTTCATG
GGCAGTTGATTCTTTCCCAGGATTTTCTTCAAATGCTGTTGGAGAGCATTCCAGAAAACAAAAG
GTTCGGCCTGTCTGTTGAGAACATCGTCGGTGATTGGCTTGAGTGTCCCGGAATACCCAAGGCA
CTGCAGGAGGAGCGCAAGGCCAAGGACTGCTCGCCGAGTAGGCTGGTACGGCAAGTGGGCTCCG
AGGTGGCCAAATGGATTCGAGTGAACCGAAGACCCGGAAAACGCCAACGAAGGAAACGTGAAGC
CGCCTTTGAAAAGCTTTCTCCAGACCAGATCGTGTTGCTTTTGGAGTGGCTCTTAGAGCAGAAG
ACCCTGAGCCCCCAGACATTGCATCGTCTCCAGCAGACGTACCATCTCCAGGAGCAGGATGCAG
AGGTTCGCCATCGATGGTGTGAACTGGTTATTAAGCACAAGTACACAAAGGCATATGATCAGGT
CAAGAGGTTCCTACAGGAGGATCAGGCCATGGGCATATACCTCTACGGGGAGCTGATGGTGAGT
GAGGATGCCAGGCTGCAGCAGCTTGCCCACCGGTGCTTTGAGCTGGTAAAGGGACACATGGACA
AAGCATCCGCCCAGGTGGTGACCGAAATGCTGTTCTAAAGAGGTAATTTTCTTTCTTTCTCCTC
CTAACCCTCCATGTTGATTTGAAAGCCACAGATGAGCCAAGGCCGCCACAGCACCAGAGGGCTG
CCAAGCGGTCTTGGGGAGCAAGCAGGGTGGGTCCCCAAGAACAGGAAGGCTCAGGATCTCTGGA
GCCACCTCGTCTTCTGGATATACTGGTGTAAAACAGGTTCCTACTAAAGGAGGAACAGCCCCCT
GGTACCTTGGATTCTGCACAGATCCACAGGCTTCTCAGGGTCAAGGTCAGCACAGTGGTCCGCA
GCCTCGCTGCTCCAAGCTTCGGCCTGCAGGCGTTTCTCCTAGAGGCTGTGTAAACCTGAGACTC
CTTGGCCTCTTGTCTCCCCGACCTGTAAAGTAGGCAGCAGCGTGTTCTTACACATCCCCCTTGC
TCAGTGACCGGTGAGGTAGACAGCAGGTCTTCTTTGCCTGTCCACCCAGGTGACACTGGCATCC
TAAGGGCAAGTCTGTTTCCATCTGGTGCTGGAACAGGGTTTACCCTGGCTCCCAGAGTCCTTGC
CTGTGCTGTTACCTTCCCCCTCTAGCCAACTTGTTGACCAGTAGTGTAGTTGAGCCACAAAGCA
TGGAGTTCTGGGACACAAGTGTGGGTTAGTGTGTTTCTTTCACAGTCATGTCATCTCTGCATCT
TCTTTCTCAGTTATTGTCATGGTGGTACATATGATGTTTACTTTTCGTATATTTTTTAAATTTT
ACATCAATCACTGTGTTACTGTTGTTCTCTGTGAGTACTATTATGAATGTTTAGAATTGTGTTG
CTAATCTTAACTCTTGGTCAGGCATTAAATTTACATTTTCACATTTCACTTTTACAAAACCCAC
TCCTGTGTACTATGTTTATTTTGTTTATGTGAAAGAACTAATCTTATGAAGGGGAAGCATGTTT
ACTGAAATATGATGGTGTTCTTGCGGAAATGCTGGGGACCGCCATAGTTGAGCAGAGGAGAGTG
TGGGGTGGAGTAAGCCTGCACACCACGACCTAGGACGGTGGCCTGTGCAAGCAGGCAGGTTCGG
CTGGGCTCCTCTCCACTGCCTGCTGCAGGCATTTCTCTAGGAACTTGTAAGCTCAGGGATTGTT
GGTGTGGTGTGTAAGGTCACAATAAAGCCACTATTCTGTCTTCCGGTCCTTTGGCCTTCACTTT
GGAGAGCCAGAGTCAGATAGTGGTACGAGCGACTCTTCTAAGGGTATTTTTGGCCCCTGTGCAA
GCAAATCCTCAACTTCCAAGCTCCCCTGAGAACTCTATGCTGTACCCCAGCTCATCCAACCAAA
TGCTTGGTCACAGCAGCTCCAGAAACTCTCTGCACACCATGCCTACTGAGAAGAGTTTCCTATC
CAAGGGGCCCATAGACATCTCAGGCCATTAAAAATCTGCAGTTTGAGAACAGGGTGTGTCCCCA
GGGTTAAAGGTCACATACTCAGAGCGAGGATTGGTCATGTAGCTGATAAGTGTGTCCTTTGTCT
CCTGGTTCCCTATGCTCCTCTATACAGTGCAGCTAGCATGCTGGATGACAGCAGGCTACATACA
CTGCTAGCGTGGTGGGCTCAGAGGCGGTGTGGAGGACACTCAGCGCATGTGGATGGGAGTGGTT
GGGCATGGCGCTGCCCTCACCTGCTCTGGCTGCTTGGGTTCCTGGCATGCTGATTTGTGACTTG
AGATTAAAATCACATTGCCAGGGATTACCACGCAACCATGACCTTGGCTGCTCCTGCAGAACCG
TGGCTACTTTCTCTCTGCAGTTTGGAGAACAGAGGCACCTTGTGGCTCTTTGGGAAAAAAAAAA
AAAAAAAAGAAGCCACCAGCCTTCGAAGATGCTCACCAGCCCTTTAATTATGGCCGGCGATGAC
CTCTCTAACAAGGTGCAGAGCTTAGCTGATTGGTGAACAGTGATTGGTTTCCGCTTTGTTCACA
GTGGCTAAGTTCTGCACCTGAAGAGAAGGTGAGATGGGGACAGTTAACTTGCAGCTGCCAGGCA
GAGGCCACTGCCTGGTGGTCACTCCAGAGGAGGAGAGACCAGCCTGCCTCAAGGCTGTGTTGTC
AAGAGTGCAAGCAGCGTGCTGACCACCCTTAAATGTGCCTACAGAAAATACAGATCTACTGCTA
ATTAGTCCACTGTAATATCAAGTGTATTGGAGTCACAGAAAACTAAAACCAGATGCATCACAAA
AGCTGAGCGGAGTCTCAGCTGATGCCACACGTGAGGGTGGGGTTGGGGGTGGTTCTTTTGTCCC
TGCTGGGCGTGGTGAACTCTTTCTTGTATTTGCAGTCCAGGTCTCCATGTCTTCACAGTCGCTG
GCAGGATGATGCCCAGGGCACGCCAGGAGGCACTGCCCAGCTGTGATTGGACCCGCCCTCCGGT
GCCTACTGAGCTGATATCAGTTCTCATTTCACACACTGGCTCAGTTCAGCAGGAACAGGAGTCG
AGCCCTTGAGCAAAAAGCCTACCCATCTGTAAGTGCCTGAGGCAGGCCTCCCACGGACAAGAAG
ATGAAGGGCCTTGAGTGTCTGGTACCAGACCCAACAGCAGTGGTATCCCTCTGTATGTGCTCTT
GAGGTGGGGATTTATAGAGTGCAGATCAAACTTTGGAAAGATTGCATTCCCTAGAAGTAAGGCA
GAGCAGAAGCCGAGCGTTTGCCATGTGTTTGAGACAGAGCACACCCTGTTGTCTGCTGCCTTGA
GCAGTGTGAATGCTGTCTTAAGGGCTTTCTGTAGAGCCGCCTTCCATTGAATCTCTCTGGGCTT
CACAGCCCTGCATGGCCTATGCTGTGACTGTGCACCCCAGGTCGAGGATTGTGAGGCGTGGCTT
CAGTCTTGTCCCTGTCCTCCCTGAAAGTTCCCTCTCAAGTGGAGGTCAGAGGCTAGGAGAACTC
CTGTCAGAATGACTGTGGTGACTGGGTAATAAATTTTATTGCTGTTTCCTTCACAGGACAGATC
ACAGTGAGATTCTCTTTCATACACCTTCTCCTAGCCCTGGTGGGGCCAGGACTGCATTGACCCT
GGACATCAAAGGGAAGATTATGTGGCTGCTAAGGCCATCAGCCCACAGCAGCGGTTGGTCCAGC
TTGGGCTTCTGGCTCCCAGAGCCCGGGCTCCCGTGGCATATATAAAAGGCGGAGCCTCATAAAC
TGTTGCACCTGGCAGCTGCCTTTGTCCCCAGTCCTAGAGACCGAGTCTACACACTGGAATTGAG
CTGTGACTTGAAGGCAGTCCTTCAAAAGAATGAAGGATACCCTCCCCTAGGCAGATGGAGAACC
GACTGCCTGCTTCCTGTGATTGCAAGCACTAGCTGCCATGCTCTGGGACTGCAGAATCACATGA
CACCTCCTGTGGCTGGCCCCCAAGGACTCTGCAGAGACCCTTTGATGTGTTCAGTCAATAGAGC
ATTCCTGTTTTTGAAAATGCAGGGAAGCCTAAGATGTCTTAATAAAGTACCGGATTTGCTGGTG

hide sequence

RefSeq Acc Id:

XM_017600471 ⟹ XP_017455960

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	1,817,637 - 2,133,008 (-)	NCBI
mRatBN7.2	17	1,811,922 - 2,127,314 (-)	NCBI
Rnor_6.0	17	507,389 - 825,062 (+)	NCBI

Sequence:

show sequence

CCGTGGTAACCCGGAGTCTGCGGAAGTGTAGCTGCAGCACGGTGGCCGACAGGTAACCCGCAGC
TCGGCTGTCAACCAGCCACTCCGGGTTATGGGGATCGGCGACCTCTGATGAGGGAGCAGAGGAA
GTACCGAGTGGATGTATTCTGTTGACATGGACACAGACATGACAAGGACCTTCAGAACTATGAG
AACTGACAAAACCTTTCACCGTATATATGTATGGGTCAGGGTTAAAGTTGACACAGAGCCTTCT
TCCTCTGGTACAAGGAATTGGAAGTTGTGGAAAGACAACCTATGCCAGTGGGTGCTTCTTATTT
GGTAAGCCAGCCATTTGTGATTCTGAGCTGCTAGAGGAGATAAGAAGCCTCAGCTGCGATTCAG
CAAAGCTACCAACTGCAAACTACACCATGGACATAAACCTGGACCCTTCTCGGGATGATCTGCC
TCTCATGGCCAACACCAGCCACCTGCTTGTGAAGCACTACGTACTGGATTTGGATGTGGACTTT
GGAAGTCGAGTCCTTGAGGGCAACATAGTGCTTTTCTTTGGAGATGGAAACAGATGTAAAAAAC
AATCGAGTTCCTCCCAGGAAACCTTCCAGATGGAGTCAGAGGAAGCCTACATACTTAGGACAGC
TGAACCCTGCCATGTTCCAAAGATGGATTCAAATACTTTCTCACCTAAGATGGGACATAGAGAA
TTTGCAGTCTTTGGTAAAAGTGATCAAGATGCCTTTGATAATGATGGTAACCATGACAACAAGG
AACATGATTCTGAGAGCTCTAGCTCAAAGTACTGCTGTGACACAGGGAATCATGGGAGAGAGGA
TTTCTTGCTAGTGTTGGACTGCTGTGATTTGTCTGTGCTAAAGGTAGAGGAGGTGGATGTAGCT
GCTGTGCCAGATCTTGAGAAATTTACAAAAGCTCCAAACCTCACAGCTGCTCCTGAGAAGCGCA
GGTGTGAGATTGTCCGTGACCTTGTGGCTCTGCCTGCAGATGCTTGGAGGGAGCAGTTAGACTG
CTACACTCGCTGCAGCCAGGCTCCTGGCTGTGGGGAGCTCTTGTTTGACTCTGACAAGTGGAGC
TTACAGATCAGGAAGAAGGGGGTTCCGACAGCTGCTGACTTTCCTCATGCCATCAGGATATGGT
ATAAAACTAAACCTGAGGGGCAGTCAGTGACTTGGACCTCAGACCAGGATGGCAGGCCATGTGT
TTATACTATGGGATCCCCCATCAACAACAGGGCCCTTTTTCCATGCCAGGAACCACCGGTTGCC
ATGTCAACATGGCAGGCTACAGTTCGAGCAGCTGCATCTTTTGTTGTTTTAATGAGTGGGGAAA
AGTCTGCCAAGCCCACACCACTTCGAGAAGGATACATGAGCTGGCATTACTATGTGACCATGCC
AATGCCTGCCTCTACCTTCACAATTGCAGTGGGATGCTGGACAGAAATGAAGCCCAAGACATCC
CCATTAGATGATCTGACTGAGCACACCCTCCCCCTCCGACCATCAGACGCTGACTTCAGGTATG
GTAACACCTGCAGTCATATGGAATACCCCTGCCGGTTCCAGAGTGCGTCTGCTGCCACCCAGAA
CATCATTCCTTATCGAGTGTTTGCCCCAGTGTGCCTTGAGGGTGCCTGCCGAGAGGCCCTGCTG
TGGCTGATCCCCTCTTGCCTCTCAGCTGCACACTCTGTCCTGGGAACACACCCTTTCTCCAGGC
TGGACATACTTATTGTCCCCACCAACTTCCCAAGTCTGGGAATGGCCAGCCCACACATCATCTT
CCTCTCTCAGAGCACCTTGACAGGCACAAGCCATCTCTGCGGGACCCGTCTTTGCCATGAAATT
GCTCATGCCTGGTTTGGCCTAGCCATAGGGGCCCGAGACTGGACAGAGGAGTGGCTCAGCGAAG
GATTTGCCACTCACTTGGAAGATATATTTTGGGCTGAAGCACAGCAGCTGCCCCCACATGAGGC
CCTGGAGCAGCAAGAGCTGAGGGCTTGCCTGCGCTGGCACCGCCTGCAGGATGAGCTTCAGAAC
TCCCCAGAGGGAATGCAGGTGTTAAGACCCAACAAAGAGAAGACTGGTCACGTGAGTGCTTCAG
GTGCCTCTGTTGTCAAGAATGGACTCAACCCAGAGAAGGGCTTCATGCAGGTTCATTACTTAAA
GGGCTACTTCCTTCTTCGATTCCTAGCCAGAACACTTGGAGAGGAAACTTATTTTCCATTTTTA
AGAAAATTTGTGCACCTGTTTCATGGGCAGTTGATTCTTTCCCAGGATTTTCTTCAAATGCTGT
TGGAGAGCATTCCAGAAAACAAAAGGTTCGGCCTGTCTGTTGAGAACATCGTCGGTGATTGGCT
TGAGTGTCCCGGAATACCCAAGGCACTGCAGGAGGAGCGCAAGGCCAAGGACTGCTCGCCGAGT
AGGCTGGTACGGCAAGTGGGCTCCGAGGTGGCCAAATGGATTCGAGTGAACCGAAGACCCGGAA
AACGCCAACGAAGGAAACGTGAAGCCGCCTTTGAAAAGCTTTCTCCAGACCAGATCGTGTTGCT
TTTGGAGTGGCTCTTAGAGCAGAAGACCCTGAGCCCCCAGACATTGCATCGTCTCCAGCAGACG
TACCATCTCCAGGAGCAGGATGCAGAGGTTCGCCATCGATGGTGTGAACTGGTTATTAAGCACA
AGTACACAAAGGCATATGATCAGGTCAAGAGGTTCCTACAGGAGGATCAGGCCATGGGCATATA
CCTCTACGGGGAGCTGATGGTGAGTGAGGATGCCAGGCTGCAGCAGCTTGCCCACCGGTGCTTT
GAGCTGGTAAAGGGACACATGGACAAAGCATCCGCCCAGGTGGTGACCGAAATGCTGTTCTAAA
GAGGTAATTTTCTTTCTTTCTCCTCCTAACCCTCCATGTTGATTTGAAAGCCACAGATGAGCCA
AGGCCGCCACAGCACCAGAGGGCTGCCAAGCGGTCTTGGGGAGCAAGCAGGGTGGGTCCCCAAG
AACAGGAAGGCTCAGGATCTCTGGAGCCACCTCGTCTTCTGGATATACTGGTGTAAAACAGGTT
CCTACTAAAGGAGGAACAGCCCCCTGGTACCTTGGATTCTGCACAGATCCACAGGCTTCTCAGG
GTCAAGGTCAGCACAGTGGTCCGCAGCCTCGCTGCTCCAAGCTTCGGCCTGCAGGCGTTTCTCC
TAGAGGCTGTGTAAACCTGAGACTCCTTGGCCTCTTGTCTCCCCGACCTGTAAAGTAGGCAGCA
GCGTGTTCTTACACATCCCCCTTGCTCAGTGACCGGTGAGGTAGACAGCAGGTCTTCTTTGCCT
GTCCACCCAGGTGACACTGGCATCCTAAGGGCAAGTCTGTTTCCATCTGGTGCTGGAACAGGGT
TTACCCTGGCTCCCAGAGTCCTTGCCTGTGCTGTTACCTTCCCCCTCTAGCCAACTTGTTGACC
AGTAGTGTAGTTGAGCCACAAAGCATGGAGTTCTGGGACACAAGTGTGGGTTAGTGTGTTTCTT
TCACAGTCATGTCATCTCTGCATCTTCTTTCTCAGTTATTGTCATGGTGGTACATATGATGTTT
ACTTTTCGTATATTTTTTAAATTTTACATCAATCACTGTGTTACTGTTGTTCTCTGTGAGTACT
ATTATGAATGTTTAGAATTGTGTTGCTAATCTTAACTCTTGGTCAGGCATTAAATTTACATTTT
CACATTTCACTTTTACAAAACCCACTCCTGTGTACTATGTTTATTTTGTTTATGTGAAAGAACT
AATCTTATGAAGGGGAAGCATGTTTACTGAAATATGATGGTGTTCTTGCGGAAATGCTGGGGAC
CGCCATAGTTGAGCAGAGGAGAGTGTGGGGTGGAGTAAGCCTGCACACCACGACCTAGGACGGT
GGCCTGTGCAAGCAGGCAGGTTCGGCTGGGCTCCTCTCCACTGCCTGCTGCAGGCATTTCTCTA
GGAACTTGTAAGCTCAGGGATTGTTGGTGTGGTGTGTAAGGTCACAATAAAGCCACTATTCTGT
CTTCCGGTCCTTTGGCCTTCACTTTGGAGAGCCAGAGTCAGATAGTGGTACGAGCGACTCTTCT
AAGGGTATTTTTGGCCCCTGTGCAAGCAAATCCTCAACTTCCAAGCTCCCCTGAGAACTCTATG
CTGTACCCCAGCTCATCCAACCAAATGCTTGGTCACAGCAGCTCCAGAAACTCTCTGCACACCA
TGCCTACTGAGAAGAGTTTCCTATCCAAGGGGCCCATAGACATCTCAGGCCATTAAAAATCTGC
AGTTTGAGAACAGGGTGTGTCCCCAGGGTTAAAGGTCACATACTCAGAGCGAGGATTGGTCATG
TAGCTGATAAGTGTGTCCTTTGTCTCCTGGTTCCCTATGCTCCTCTATACAGTGCAGCTAGCAT
GCTGGATGACAGCAGGCTACATACACTGCTAGCGTGGTGGGCTCAGAGGCGGTGTGGAGGACAC
TCAGCGCATGTGGATGGGAGTGGTTGGGCATGGCGCTGCCCTCACCTGCTCTGGCTGCTTGGGT
TCCTGGCATGCTGATTTGTGACTTGAGATTAAAATCACATTGCCAGGGATTACCACGCAACCAT
GACCTTGGCTGCTCCTGCAGAACCGTGGCTACTTTCTCTCTGCAGTTTGGAGAACAGAGGCACC
TTGTGGCTCTTTGGGAAAAAAAAAAAAAAAAAAGAAGCCACCAGCCTTCGAAGATGCTCACCAG
CCCTTTAATTATGGCCGGCGATGACCTCTCTAACAAGGTGCAGAGCTTAGCTGATTGGTGAACA
GTGATTGGTTTCCGCTTTGTTCACAGTGGCTAAGTTCTGCACCTGAAGAGAAGGTGAGATGGGG
ACAGTTAACTTGCAGCTGCCAGGCAGAGGCCACTGCCTGGTGGTCACTCCAGAGGAGGAGAGAC
CAGCCTGCCTCAAGGCTGTGTTGTCAAGAGTGCAAGCAGCGTGCTGACCACCCTTAAATGTGCC
TACAGAAAATACAGATCTACTGCTAATTAGTCCACTGTAATATCAAGTGTATTGGAGTCACAGA
AAACTAAAACCAGATGCATCACAAAAGCTGAGCGGAGTCTCAGCTGATGCCACACGTGAGGGTG
GGGTTGGGGGTGGTTCTTTTGTCCCTGCTGGGCGTGGTGAACTCTTTCTTGTATTTGCAGTCCA
GGTCTCCATGTCTTCACAGTCGCTGGCAGGATGATGCCCAGGGCACGCCAGGAGGCACTGCCCA
GCTGTGATTGGACCCGCCCTCCGGTGCCTACTGAGCTGATATCAGTTCTCATTTCACACACTGG
CTCAGTTCAGCAGGAACAGGAGTCGAGCCCTTGAGCAAAAAGCCTACCCATCTGTAAGTGCCTG
AGGCAGGCCTCCCACGGACAAGAAGATGAAGGGCCTTGAGTGTCTGGTACCAGACCCAACAGCA
GTGGTATCCCTCTGTATGTGCTCTTGAGGTGGGGATTTATAGAGTGCAGATCAAACTTTGGAAA
GATTGCATTCCCTAGAAGTAAGGCAGAGCAGAAGCCGAGCGTTTGCCATGTGTTTGAGACAGAG
CACACCCTGTTGTCTGCTGCCTTGAGCAGTGTGAATGCTGTCTTAAGGGCTTTCTGTAGAGCCG
CCTTCCATTGAATCTCTCTGGGCTTCACAGCCCTGCATGGCCTATGCTGTGACTGTGCACCCCA
GGTCGAGGATTGTGAGGCGTGGCTTCAGTCTTGTCCCTGTCCTCCCTGAAAGTTCCCTCTCAAG
TGGAGGTCAGAGGCTAGGAGAACTCCTGTCAGAATGACTGTGGTGACTGGGTAATAAATTTTAT
TGCTGTTTCCTTCACAGGACAGATCACAGTGAGATTCTCTTTCATACACCTTCTCCTAGCCCTG
GTGGGGCCAGGACTGCATTGACCCTGGACATCAAAGGGAAGATTATGTGGCTGCTAAGGCCATC
AGCCCACAGCAGCGGTTGGTCCAGCTTGGGCTTCTGGCTCCCAGAGCCCGGGCTCCCGTGGCAT
ATATAAAAGGCGGAGCCTCATAAACTGTTGCACCTGGCAGCTGCCTTTGTCCCCAGTCCTAGAG
ACCGAGTCTACACACTGGAATTGAGCTGTGACTTGAAGGCAGTCCTTCAAAAGAATGAAGGATA
CCCTCCCCTAGGCAGATGGAGAACCGACTGCCTGCTTCCTGTGATTGCAAGCACTAGCTGCCAT
GCTCTGGGACTGCAGAATCACATGACACCTCCTGTGGCTGGCCCCCAAGGACTCTGCAGAGACC
CTTTGATGTGTTCAGTCAATAGAGCATTCCTGTTTTTGAAAATGCAGGGAAGCCTAAGATGTCT
TAATAAAGTACCGGATTTGCTGGTG

hide sequence

RefSeq Acc Id:

XM_017600473 ⟹ XP_017455962

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	1,817,637 - 2,083,259 (-)	NCBI
mRatBN7.2	17	1,811,922 - 2,077,548 (-)	NCBI
Rnor_6.0	17	556,489 - 825,062 (+)	NCBI

Sequence:

show sequence

TTGTTTTGTTTTGTTTTGTTTTCTATTCTGGTTGTATTTAAATTCACTACCAAGCCAAGCCTGG
AGGCCCACACCTACAACCCCAGAAGGCAGAGGCAGGAGAATTACTGCAAATGTGAGGCTAGTTT
GTCTGAAAGCAAAATAAACTCCAAGATAAAATATTTTGGTTACTGAGAAGAGGGATCCAGGAAG
GATTTTGAGGCATTTGAACTGAGGTTTAGAGGGAGAACAGGATTTAACAAATTGGGCATGAAGA
GGTGGGAGCCAGACTGAAGAGCTCTGGAAGAAAGCCTATGCAGAAGGAGGGGAGGAGCCAGGAA
CATGCCAGCCCTAAAGGCAGGCAGATCTGCCGTGAACAGTTACAACTGTTCCATAGGAGGTCAG
GCTTCCTGAGGTTAGGTGAGATTTTGATGGGAAATCAATCACTAGGGACAAGGTAGAAACTCAG
GTTGTTTGCTGAAAGGAAATTCTAGCAGGAGATGCTTTAATAAGGTCTAATAGGGGCAGATAAA
CTTGGAAAGTAAGGGGCACAGTAGAAATGGGGGACAGCGCTCAATTTATGTAAAGTCAAGCAAA
TAATGGTTGACAAAGTGGTTGAGAAGAAGTACCTCTAGGGAGTTTACAATACAAAGTTTAAATA
CTGTCCTCTGTCATCATTGGGTTTTAGTTCTTCCCCCTGATATTTGTTTTTCATCTTTTGGTAA
AAGAGAAGCAGCATATGCTAAAAGAAATCAGGTGCATGTCAGGGACCGAAATGGTTCAGATAAT
CCTCCTTTTAGCTGGATTGTTATCAGGTAGGAATACATTTTGATTCAGATCTTTTCTGAAGAAC
TCGTACATTGTATTGTAACATCTGCTTCTACATTTTAATCTCTCTCCTTCCTTTTATAGATATT
TGCATACTTTTTTTCCAAATAAGACCTTTTGTTTGCCACAAGAAAGCTATTACCCAGAATGCTA
ATGGTTTTCAGCTATTAAGTTGTAATGTATACCTTGAGTATTTAACTATAAATTTGAAAAGTCT
CCATGAGCAATCTCAAAGGAATACTTAGAATGCACTCCTGGTAAATTGGCTCATTTTCCTGTAA
TTTACTGGAAGTGCTGATAGGAGAGCAGGCCTAATGTGAAAAGTGCATTAATCCCTGGAGTTAT
ATTGTGTGGATTAAATTATTACTCTCAAAGAATACAATGTATGAAGCCATTCAGCCCTCATTCA
CACTTGTTACTTAGAATCACAGTGGAAAAAAAAATCACTTAGGTTTTGATGCACAAAATTAGAA
AGTGATACATTTAATATCTTTTAAAACAAGAGTCAGTAATAGTTGTAGTTTTACATAAGAATTG
CTCTTTTGAAACAAGGACTGTGTCCCTTAGCAGCTTAGAAGTCAGTAATGTGGCTTCTCTCCTG
TCAGAAAGATGATCCTTCACTCTTCCCTGAGCAGCTGCCACCTTGTGGATTGCTAGGGAATTGG
AAGTTGTGGAAAGACAACCTATGCCAGTGGGTGCTTCTTATTTGGTAAGCCAGCCATTTGTGAT
TCTGAGCTGCTAGAGGAGATAAGAAGCCTCAGCTGCGATTCAGCAAAGCTACCAACTGCAAACT
ACACCATGGACATAAACCTGGACCCTTCTCGGGATGATCTGCCTCTCATGGCCAACACCAGCCA
CCTGCTTGTGAAGCACTACGTACTGGATTTGGATGTGGACTTTGGAAGTCGAGTCCTTGAGGGC
AACATAGTGCTTTTCTTTGGAGATGGAAACAGATGTAAAAAACAATCGAGTTCCTCCCAGGAAA
CCTTCCAGATGGAGTCAGAGGAAGCCTACATACTTAGGACAGCTGAACCCTGCCATGTTCCAAA
GATGGATTCAAATACTTTCTCACCTAAGATGGGACATAGAGAATTTGCAGTCTTTGGTAAAAGT
GATCAAGATGCCTTTGATAATGATGGTAACCATGACAACAAGGAACATGATTCTGAGAGCTCTA
GCTCAAAGTACTGCTGTGACACAGGGAATCATGGGAGAGAGGATTTCTTGCTAGTGTTGGACTG
CTGTGATTTGTCTGTGCTAAAGGTAGAGGAGGTGGATGTAGCTGCTGTGCCAGATCTTGAGAAA
TTTACAAAAGCTCCAAACCTCACAGCTGCTCCTGAGAAGCGCAGGTGTGAGATTGTCCGTGACC
TTGTGGCTCTGCCTGCAGATGCTTGGAGGGAGCAGTTAGACTGCTACACTCGCTGCAGCCAGGC
TCCTGGCTGTGGGGAGCTCTTGTTTGACTCTGACAAGTGGAGCTTACAGATCAGGAAGAAGGGG
GTTCCGACAGCTGCTGACTTTCCTCATGCCATCAGGATATGGTATAAAACTAAACCTGAGGGGC
AGTCAGTGACTTGGACCTCAGACCAGGATGGCAGGCCATGTGTTTATACTATGGGATCCCCCAT
CAACAACAGGGCCCTTTTTCCATGCCAGGAACCACCGGTTGCCATGTCAACATGGCAGGCTACA
GTTCGAGCAGCTGCATCTTTTGTTGTTTTAATGAGTGGGGAAAAGTCTGCCAAGCCCACACCAC
TTCGAGAAGGATACATGAGCTGGCATTACTATGTGACCATGCCAATGCCTGCCTCTACCTTCAC
AATTGCAGTGGGATGCTGGACAGAAATGAAGCCCAAGACATCCCCATTAGATGATCTGACTGAG
CACACCCTCCCCCTCCGACCATCAGACGCTGACTTCAGGTATGGTAACACCTGCAGTCATATGG
AATACCCCTGCCGGTTCCAGAGTGCGTCTGCTGCCACCCAGAACATCATTCCTTATCGAGTGTT
TGCCCCAGTGTGCCTTGAGGGTGCCTGCCGAGAGGCCCTGCTGTGGCTGATCCCCTCTTGCCTC
TCAGCTGCACACTCTGTCCTGGGAACACACCCTTTCTCCAGGCTGGACATACTTATTGTCCCCA
CCAACTTCCCAAGTCTGGGAATGGCCAGCCCACACATCATCTTCCTCTCTCAGAGCACCTTGAC
AGGCACAAGCCATCTCTGCGGGACCCGTCTTTGCCATGAAATTGCTCATGCCTGGTTTGGCCTA
GCCATAGGGGCCCGAGACTGGACAGAGGAGTGGCTCAGCGAAGGATTTGCCACTCACTTGGAAG
ATATATTTTGGGCTGAAGCACAGCAGCTGCCCCCACATGAGGCCCTGGAGCAGCAAGAGCTGAG
GGCTTGCCTGCGCTGGCACCGCCTGCAGGATGAGCTTCAGAACTCCCCAGAGGGAATGCAGGTG
TTAAGACCCAACAAAGAGAAGACTGGTCACGTGAGTGCTTCAGGTGCCTCTGTTGTCAAGAATG
GACTCAACCCAGAGAAGGGCTTCATGCAGGTTCATTACTTAAAGGGCTACTTCCTTCTTCGATT
CCTAGCCAGAACACTTGGAGAGGAAACTTATTTTCCATTTTTAAGAAAATTTGTGCACCTGTTT
CATGGGCAGTTGATTCTTTCCCAGGATTTTCTTCAAATGCTGTTGGAGAGCATTCCAGAAAACA
AAAGGTTCGGCCTGTCTGTTGAGAACATCGTCGGTGATTGGCTTGAGTGTCCCGGAATACCCAA
GGCACTGCAGGAGGAGCGCAAGGCCAAGGACTGCTCGCCGAGTAGGCTGGTACGGCAAGTGGGC
TCCGAGGTGGCCAAATGGATTCGAGTGAACCGAAGACCCGGAAAACGCCAACGAAGGAAACGTG
AAGCCGCCTTTGAAAAGCTTTCTCCAGACCAGATCGTGTTGCTTTTGGAGTGGCTCTTAGAGCA
GAAGACCCTGAGCCCCCAGACATTGCATCGTCTCCAGCAGACGTACCATCTCCAGGAGCAGGAT
GCAGAGGTTCGCCATCGATGGTGTGAACTGGTTATTAAGCACAAGTACACAAAGGCATATGATC
AGGTCAAGAGGTTCCTACAGGAGGATCAGGCCATGGGCATATACCTCTACGGGGAGCTGATGGT
GAGTGAGGATGCCAGGCTGCAGCAGCTTGCCCACCGGTGCTTTGAGCTGGTAAAGGGACACATG
GACAAAGCATCCGCCCAGGTGGTGACCGAAATGCTGTTCTAAAGAGGTAATTTTCTTTCTTTCT
CCTCCTAACCCTCCATGTTGATTTGAAAGCCACAGATGAGCCAAGGCCGCCACAGCACCAGAGG
GCTGCCAAGCGGTCTTGGGGAGCAAGCAGGGTGGGTCCCCAAGAACAGGAAGGCTCAGGATCTC
TGGAGCCACCTCGTCTTCTGGATATACTGGTGTAAAACAGGTTCCTACTAAAGGAGGAACAGCC
CCCTGGTACCTTGGATTCTGCACAGATCCACAGGCTTCTCAGGGTCAAGGTCAGCACAGTGGTC
CGCAGCCTCGCTGCTCCAAGCTTCGGCCTGCAGGCGTTTCTCCTAGAGGCTGTGTAAACCTGAG
ACTCCTTGGCCTCTTGTCTCCCCGACCTGTAAAGTAGGCAGCAGCGTGTTCTTACACATCCCCC
TTGCTCAGTGACCGGTGAGGTAGACAGCAGGTCTTCTTTGCCTGTCCACCCAGGTGACACTGGC
ATCCTAAGGGCAAGTCTGTTTCCATCTGGTGCTGGAACAGGGTTTACCCTGGCTCCCAGAGTCC
TTGCCTGTGCTGTTACCTTCCCCCTCTAGCCAACTTGTTGACCAGTAGTGTAGTTGAGCCACAA
AGCATGGAGTTCTGGGACACAAGTGTGGGTTAGTGTGTTTCTTTCACAGTCATGTCATCTCTGC
ATCTTCTTTCTCAGTTATTGTCATGGTGGTACATATGATGTTTACTTTTCGTATATTTTTTAAA
TTTTACATCAATCACTGTGTTACTGTTGTTCTCTGTGAGTACTATTATGAATGTTTAGAATTGT
GTTGCTAATCTTAACTCTTGGTCAGGCATTAAATTTACATTTTCACATTTCACTTTTACAAAAC
CCACTCCTGTGTACTATGTTTATTTTGTTTATGTGAAAGAACTAATCTTATGAAGGGGAAGCAT
GTTTACTGAAATATGATGGTGTTCTTGCGGAAATGCTGGGGACCGCCATAGTTGAGCAGAGGAG
AGTGTGGGGTGGAGTAAGCCTGCACACCACGACCTAGGACGGTGGCCTGTGCAAGCAGGCAGGT
TCGGCTGGGCTCCTCTCCACTGCCTGCTGCAGGCATTTCTCTAGGAACTTGTAAGCTCAGGGAT
TGTTGGTGTGGTGTGTAAGGTCACAATAAAGCCACTATTCTGTCTTCCGGTCCTTTGGCCTTCA
CTTTGGAGAGCCAGAGTCAGATAGTGGTACGAGCGACTCTTCTAAGGGTATTTTTGGCCCCTGT
GCAAGCAAATCCTCAACTTCCAAGCTCCCCTGAGAACTCTATGCTGTACCCCAGCTCATCCAAC
CAAATGCTTGGTCACAGCAGCTCCAGAAACTCTCTGCACACCATGCCTACTGAGAAGAGTTTCC
TATCCAAGGGGCCCATAGACATCTCAGGCCATTAAAAATCTGCAGTTTGAGAACAGGGTGTGTC
CCCAGGGTTAAAGGTCACATACTCAGAGCGAGGATTGGTCATGTAGCTGATAAGTGTGTCCTTT
GTCTCCTGGTTCCCTATGCTCCTCTATACAGTGCAGCTAGCATGCTGGATGACAGCAGGCTACA
TACACTGCTAGCGTGGTGGGCTCAGAGGCGGTGTGGAGGACACTCAGCGCATGTGGATGGGAGT
GGTTGGGCATGGCGCTGCCCTCACCTGCTCTGGCTGCTTGGGTTCCTGGCATGCTGATTTGTGA
CTTGAGATTAAAATCACATTGCCAGGGATTACCACGCAACCATGACCTTGGCTGCTCCTGCAGA
ACCGTGGCTACTTTCTCTCTGCAGTTTGGAGAACAGAGGCACCTTGTGGCTCTTTGGGAAAAAA
AAAAAAAAAAAAGAAGCCACCAGCCTTCGAAGATGCTCACCAGCCCTTTAATTATGGCCGGCGA
TGACCTCTCTAACAAGGTGCAGAGCTTAGCTGATTGGTGAACAGTGATTGGTTTCCGCTTTGTT
CACAGTGGCTAAGTTCTGCACCTGAAGAGAAGGTGAGATGGGGACAGTTAACTTGCAGCTGCCA
GGCAGAGGCCACTGCCTGGTGGTCACTCCAGAGGAGGAGAGACCAGCCTGCCTCAAGGCTGTGT
TGTCAAGAGTGCAAGCAGCGTGCTGACCACCCTTAAATGTGCCTACAGAAAATACAGATCTACT
GCTAATTAGTCCACTGTAATATCAAGTGTATTGGAGTCACAGAAAACTAAAACCAGATGCATCA
CAAAAGCTGAGCGGAGTCTCAGCTGATGCCACACGTGAGGGTGGGGTTGGGGGTGGTTCTTTTG
TCCCTGCTGGGCGTGGTGAACTCTTTCTTGTATTTGCAGTCCAGGTCTCCATGTCTTCACAGTC
GCTGGCAGGATGATGCCCAGGGCACGCCAGGAGGCACTGCCCAGCTGTGATTGGACCCGCCCTC
CGGTGCCTACTGAGCTGATATCAGTTCTCATTTCACACACTGGCTCAGTTCAGCAGGAACAGGA
GTCGAGCCCTTGAGCAAAAAGCCTACCCATCTGTAAGTGCCTGAGGCAGGCCTCCCACGGACAA
GAAGATGAAGGGCCTTGAGTGTCTGGTACCAGACCCAACAGCAGTGGTATCCCTCTGTATGTGC
TCTTGAGGTGGGGATTTATAGAGTGCAGATCAAACTTTGGAAAGATTGCATTCCCTAGAAGTAA
GGCAGAGCAGAAGCCGAGCGTTTGCCATGTGTTTGAGACAGAGCACACCCTGTTGTCTGCTGCC
TTGAGCAGTGTGAATGCTGTCTTAAGGGCTTTCTGTAGAGCCGCCTTCCATTGAATCTCTCTGG
GCTTCACAGCCCTGCATGGCCTATGCTGTGACTGTGCACCCCAGGTCGAGGATTGTGAGGCGTG
GCTTCAGTCTTGTCCCTGTCCTCCCTGAAAGTTCCCTCTCAAGTGGAGGTCAGAGGCTAGGAGA
ACTCCTGTCAGAATGACTGTGGTGACTGGGTAATAAATTTTATTGCTGTTTCCTTCACAGGACA
GATCACAGTGAGATTCTCTTTCATACACCTTCTCCTAGCCCTGGTGGGGCCAGGACTGCATTGA
CCCTGGACATCAAAGGGAAGATTATGTGGCTGCTAAGGCCATCAGCCCACAGCAGCGGTTGGTC
CAGCTTGGGCTTCTGGCTCCCAGAGCCCGGGCTCCCGTGGCATATATAAAAGGCGGAGCCTCAT
AAACTGTTGCACCTGGCAGCTGCCTTTGTCCCCAGTCCTAGAGACCGAGTCTACACACTGGAAT
TGAGCTGTGACTTGAAGGCAGTCCTTCAAAAGAATGAAGGATACCCTCCCCTAGGCAGATGGAG
AACCGACTGCCTGCTTCCTGTGATTGCAAGCACTAGCTGCCATGCTCTGGGACTGCAGAATCAC
ATGACACCTCCTGTGGCTGGCCCCCAAGGACTCTGCAGAGACCCTTTGATGTGTTCAGTCAATA
GAGCATTCCTGTTTTTGAAAATGCAGGGAAGCCTAAGATGTCTTAATAAAGTACCGGATTTGCT
GGTG

hide sequence

RefSeq Acc Id:

XM_063276125 ⟹ XP_063132195

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	1,817,637 - 2,133,008 (-)	NCBI

RefSeq Acc Id:

XM_063276126 ⟹ XP_063132196

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	1,817,637 - 2,133,008 (-)	NCBI

RefSeq Acc Id:

XM_063276127 ⟹ XP_063132197

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	1,817,637 - 2,132,803 (-)	NCBI

RefSeq Acc Id:

XM_063276129 ⟹ XP_063132199

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	1,817,637 - 2,133,008 (-)	NCBI

RefSeq Acc Id:

XM_063276130 ⟹ XP_063132200

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	1,817,637 - 2,133,008 (-)	NCBI

RefSeq Acc Id:

XM_063276131 ⟹ XP_063132201

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	1,889,130 - 2,133,008 (-)	NCBI

RefSeq Acc Id:

XM_063276132 ⟹ XP_063132202

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	1,963,589 - 2,133,008 (-)	NCBI

RefSeq Acc Id:

XM_063276133 ⟹ XP_063132203

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	1,817,637 - 2,035,545 (-)	NCBI

RefSeq Acc Id:

XR_010058813

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	1,821,246 - 2,133,008 (-)	NCBI

RefSeq Acc Id:

XR_010058814

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	1,947,406 - 2,133,008 (-)	NCBI

RefSeq Acc Id:

XR_010058815

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	1,923,488 - 2,133,008 (-)	NCBI

RefSeq Acc Id:

XR_010058816

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	1,966,904 - 2,133,008 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001012346	(Get FASTA)	NCBI Sequence Viewer
	XP_008769651	(Get FASTA)	NCBI Sequence Viewer
	XP_008769653	(Get FASTA)	NCBI Sequence Viewer
	XP_008769654	(Get FASTA)	NCBI Sequence Viewer
	XP_017455960	(Get FASTA)	NCBI Sequence Viewer
	XP_017455962	(Get FASTA)	NCBI Sequence Viewer
	XP_063132195	(Get FASTA)	NCBI Sequence Viewer
	XP_063132196	(Get FASTA)	NCBI Sequence Viewer
	XP_063132197	(Get FASTA)	NCBI Sequence Viewer
	XP_063132199	(Get FASTA)	NCBI Sequence Viewer
	XP_063132200	(Get FASTA)	NCBI Sequence Viewer
	XP_063132201	(Get FASTA)	NCBI Sequence Viewer
	XP_063132202	(Get FASTA)	NCBI Sequence Viewer
	XP_063132203	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	CAH17903	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000023638
	ENSRNOP00000107620
GenBank Protein	P69527	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001012346 ⟸ NM_001012346

- UniProtKB:

P69527 (UniProtKB/Swiss-Prot), F1LRV1 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MDINLDPSRDDLPLMANTSHLLVKHYVLDLDVDFGSRVLEGNIVLFFGDGNRCKKQSSSSQETF
QMESEEAYILRTAEPCHVPKMDSNTFSPKMGHREFAVFGKSDQDAFDNDGNHDNKEHDSESSSS
KYCCDTGNHGREDFLLVLDCCDLSVLKVEEVDVAAVPDLEKFTKAPNLTAAPEKRRCEIVRDLV
ALPADAWREQLDCYTRCSQAPGCGELLFDSDKWSLQIRKKGVPTAADFPHAIRIWYKTKPEGQS
VTWTSDQDGRPCVYTMGSPINNRALFPCQEPPVAMSTWQATVRAAASFVVLMSGEKSAKPTPLR
ESWHYYVTMPMPASTFTIAVGCWTEMKPKTSPLDDLTEHTLPLRPSDADFRFVFGNCSHMEYPC
RFQSASAATQNIIPYRVFAPVCLEGACREALLWLIPSCLSAAHSVLGTHPFSRLDILIVPTNFP
SLGMASPHIIFLSQSTLTGTSHLCGTRLCHEIAHAWFGLAIGARDWTEEWLSEGFATHLEDIFW
AEAQQLPPHEALEQQELRACLRWHRLQDELQNSPEGMQVLRPNKEKTGHVSASGASVVKNGLNP
EKGFMQVHYLKGYFLLRFLARTLGEETYFPFLRKFVHLFHGQLILSQDFLQMLLESIPENKRFG
LSVENIVGDWLECPGIPKALQEERKAKDCSPSRLVRQVAKWIRVNRRPGKRQRRKREAAFEKLS
PDQIVLLLEWLLEQKTLSPQTLHRLQQTYHLQEQDAEVRHRWCELVIKHKYTKAYDQVKRFLQE
DQAMGIYLYGELMVSEDARLQQLAHRCFELVKGHMDKASAQVVTEMLF

hide sequence

RefSeq Acc Id:	XP_008769651 ⟸ XM_008771429
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2QC72 (UniProtKB/TrEMBL)
- Sequence:	show sequence MYGSGLKLTQSLLPLVQGIGSCGKTTYASGCFLFGKPAICDSELLEEIRSLSCDSAKLPTANYT MDINLDPSRDDLPLMANTSHLLVKHYVLDLDVDFGSRVLEGNIVLFFGDGNRCKKQSSSSQETF QMESEEAYILRTAEPCHVPKMDSNTFSPKMGHREFAVFGKSDQDAFDNDGNHDNKEHDSESSSS KYCCDTGNHGREDFLLVLDCCDLSVLKVEEVDVAAVPDLEKFTKAPNLTAAPEKRRCEIVRDLV ALPADAWREQLDCYTRCSQAPGCGELLFDSDKWSLQIRKKGVPTAADFPHAIRIWYKTKPEGQS VTWTSDQDGRPCVYTMGSPINNRALFPCQEPPVAMSTWQATVRAAASFVVLMSGEKSAKPTPLR EGYMSWHYYVTMPMPASTFTIAVGCWTEMKPKTSPLDDLTEHTLPLRPSDADFRYGNTCSHMEY PCRFQSASAATQNIIPYRVFAPVCLEGACREALLWLIPSCLSAAHSVLGTHPFSRLDILIVPTN FPSLGMASPHIIFLSQSTLTGTSHLCGTRLCHEIAHAWFGLAIGARDWTEEWLSEGFATHLEDI FWAEAQQLPPHEALEQQELRACLRWHRLQDELQNSPEGMQVLRPNKEKTGHVSASGASVVKNGL NPEKGFMQVHYLKGYFLLRFLARTLGEETYFPFLRKFVHLFHGQLILSQDFLQMLLESIPENKR FGLSVENIVGDWLECPGIPKALQEERKAKDCSPSRLVRQVGSEVAKWIRVNRRPGKRQRRKREA AFEKLSPDQIVLLLEWLLEQKTLSPQTLHRLQQTYHLQEQDAEVRHRWCELVIKHKYTKAYDQV KRFLQEDQAMGIYLYGELMVSEDARLQQLAHRCFELVKGHMDKASAQVVTEMLF hide sequence

RefSeq Acc Id:	XP_008769653 ⟸ XM_008771431
- Peptide Label:	isoform X2
- UniProtKB:	P69527 (UniProtKB/Swiss-Prot), F1LRV1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDINLDPSRDDLPLMANTSHLLVKHYVLDLDVDFGSRVLEGNIVLFFGDGNRCKKQSSSSQETF QMESEEAYILRTAEPCHVPKMDSNTFSPKMGHREFAVFGKSDQDAFDNDGNHDNKEHDSESSSS KYCCDTGNHGREDFLLVLDCCDLSVLKVEEVDVAAVPDLEKFTKAPNLTAAPEKRRCEIVRDLV ALPADAWREQLDCYTRCSQAPGCGELLFDSDKWSLQIRKKGVPTAADFPHAIRIWYKTKPEGQS VTWTSDQDGRPCVYTMGSPINNRALFPCQEPPVAMSTWQATVRAAASFVVLMSGEKSAKPTPLR EGYMSWHYYVTMPMPASTFTIAVGCWTEMKPKTSPLDDLTEHTLPLRPSDADFRYGNTCSHMEY PCRFQSASAATQNIIPYRVFAPVCLEGACREALLWLIPSCLSAAHSVLGTHPFSRLDILIVPTN FPSLGMASPHIIFLSQSTLTGTSHLCGTRLCHEIAHAWFGLAIGARDWTEEWLSEGFATHLEDI FWAEAQQLPPHEALEQQELRACLRWHRLQDELQNSPEGMQVLRPNKEKTGHVSASGASVVKNGL NPEKGFMQVHYLKGYFLLRFLARTLGEETYFPFLRKFVHLFHGQLILSQDFLQMLLESIPENKR FGLSVENIVGDWLECPGIPKALQEERKAKDCSPSRLVRQVGSEVAKWIRVNRRPGKRQRRKREA AFEKLSPDQIVLLLEWLLEQKTLSPQTLHRLQQTYHLQEQDAEVRHRWCELVIKHKYTKAYDQV KRFLQEDQAMGIYLYGELMVSEDARLQQLAHRCFELVKGHMDKASAQVVTEMLF hide sequence

RefSeq Acc Id:	XP_008769654 ⟸ XM_008771432
- Peptide Label:	isoform X2
- UniProtKB:	P69527 (UniProtKB/Swiss-Prot), F1LRV1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDINLDPSRDDLPLMANTSHLLVKHYVLDLDVDFGSRVLEGNIVLFFGDGNRCKKQSSSSQETF QMESEEAYILRTAEPCHVPKMDSNTFSPKMGHREFAVFGKSDQDAFDNDGNHDNKEHDSESSSS KYCCDTGNHGREDFLLVLDCCDLSVLKVEEVDVAAVPDLEKFTKAPNLTAAPEKRRCEIVRDLV ALPADAWREQLDCYTRCSQAPGCGELLFDSDKWSLQIRKKGVPTAADFPHAIRIWYKTKPEGQS VTWTSDQDGRPCVYTMGSPINNRALFPCQEPPVAMSTWQATVRAAASFVVLMSGEKSAKPTPLR EGYMSWHYYVTMPMPASTFTIAVGCWTEMKPKTSPLDDLTEHTLPLRPSDADFRYGNTCSHMEY PCRFQSASAATQNIIPYRVFAPVCLEGACREALLWLIPSCLSAAHSVLGTHPFSRLDILIVPTN FPSLGMASPHIIFLSQSTLTGTSHLCGTRLCHEIAHAWFGLAIGARDWTEEWLSEGFATHLEDI FWAEAQQLPPHEALEQQELRACLRWHRLQDELQNSPEGMQVLRPNKEKTGHVSASGASVVKNGL NPEKGFMQVHYLKGYFLLRFLARTLGEETYFPFLRKFVHLFHGQLILSQDFLQMLLESIPENKR FGLSVENIVGDWLECPGIPKALQEERKAKDCSPSRLVRQVGSEVAKWIRVNRRPGKRQRRKREA AFEKLSPDQIVLLLEWLLEQKTLSPQTLHRLQQTYHLQEQDAEVRHRWCELVIKHKYTKAYDQV KRFLQEDQAMGIYLYGELMVSEDARLQQLAHRCFELVKGHMDKASAQVVTEMLF hide sequence

RefSeq Acc Id:	XP_017455960 ⟸ XM_017600471
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2QC72 (UniProtKB/TrEMBL)
- Sequence:	show sequence MYGSGLKLTQSLLPLVQGIGSCGKTTYASGCFLFGKPAICDSELLEEIRSLSCDSAKLPTANYT MDINLDPSRDDLPLMANTSHLLVKHYVLDLDVDFGSRVLEGNIVLFFGDGNRCKKQSSSSQETF QMESEEAYILRTAEPCHVPKMDSNTFSPKMGHREFAVFGKSDQDAFDNDGNHDNKEHDSESSSS KYCCDTGNHGREDFLLVLDCCDLSVLKVEEVDVAAVPDLEKFTKAPNLTAAPEKRRCEIVRDLV ALPADAWREQLDCYTRCSQAPGCGELLFDSDKWSLQIRKKGVPTAADFPHAIRIWYKTKPEGQS VTWTSDQDGRPCVYTMGSPINNRALFPCQEPPVAMSTWQATVRAAASFVVLMSGEKSAKPTPLR EGYMSWHYYVTMPMPASTFTIAVGCWTEMKPKTSPLDDLTEHTLPLRPSDADFRYGNTCSHMEY PCRFQSASAATQNIIPYRVFAPVCLEGACREALLWLIPSCLSAAHSVLGTHPFSRLDILIVPTN FPSLGMASPHIIFLSQSTLTGTSHLCGTRLCHEIAHAWFGLAIGARDWTEEWLSEGFATHLEDI FWAEAQQLPPHEALEQQELRACLRWHRLQDELQNSPEGMQVLRPNKEKTGHVSASGASVVKNGL NPEKGFMQVHYLKGYFLLRFLARTLGEETYFPFLRKFVHLFHGQLILSQDFLQMLLESIPENKR FGLSVENIVGDWLECPGIPKALQEERKAKDCSPSRLVRQVGSEVAKWIRVNRRPGKRQRRKREA AFEKLSPDQIVLLLEWLLEQKTLSPQTLHRLQQTYHLQEQDAEVRHRWCELVIKHKYTKAYDQV KRFLQEDQAMGIYLYGELMVSEDARLQQLAHRCFELVKGHMDKASAQVVTEMLF hide sequence

RefSeq Acc Id:	XP_017455962 ⟸ XM_017600473
- Peptide Label:	isoform X2
- UniProtKB:	P69527 (UniProtKB/Swiss-Prot), F1LRV1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDINLDPSRDDLPLMANTSHLLVKHYVLDLDVDFGSRVLEGNIVLFFGDGNRCKKQSSSSQETF QMESEEAYILRTAEPCHVPKMDSNTFSPKMGHREFAVFGKSDQDAFDNDGNHDNKEHDSESSSS KYCCDTGNHGREDFLLVLDCCDLSVLKVEEVDVAAVPDLEKFTKAPNLTAAPEKRRCEIVRDLV ALPADAWREQLDCYTRCSQAPGCGELLFDSDKWSLQIRKKGVPTAADFPHAIRIWYKTKPEGQS VTWTSDQDGRPCVYTMGSPINNRALFPCQEPPVAMSTWQATVRAAASFVVLMSGEKSAKPTPLR EGYMSWHYYVTMPMPASTFTIAVGCWTEMKPKTSPLDDLTEHTLPLRPSDADFRYGNTCSHMEY PCRFQSASAATQNIIPYRVFAPVCLEGACREALLWLIPSCLSAAHSVLGTHPFSRLDILIVPTN FPSLGMASPHIIFLSQSTLTGTSHLCGTRLCHEIAHAWFGLAIGARDWTEEWLSEGFATHLEDI FWAEAQQLPPHEALEQQELRACLRWHRLQDELQNSPEGMQVLRPNKEKTGHVSASGASVVKNGL NPEKGFMQVHYLKGYFLLRFLARTLGEETYFPFLRKFVHLFHGQLILSQDFLQMLLESIPENKR FGLSVENIVGDWLECPGIPKALQEERKAKDCSPSRLVRQVGSEVAKWIRVNRRPGKRQRRKREA AFEKLSPDQIVLLLEWLLEQKTLSPQTLHRLQQTYHLQEQDAEVRHRWCELVIKHKYTKAYDQV KRFLQEDQAMGIYLYGELMVSEDARLQQLAHRCFELVKGHMDKASAQVVTEMLF hide sequence

Ensembl Acc Id:

ENSRNOP00000023638 ⟸ ENSRNOT00000023638

RefSeq Acc Id:	XP_063132199 ⟸ XM_063276129
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063132200 ⟸ XM_063276130
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063132195 ⟸ XM_063276125
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2QC72 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132196 ⟸ XM_063276126
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2QC72 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132197 ⟸ XM_063276127
- Peptide Label:	isoform X2
- UniProtKB:	P69527 (UniProtKB/Swiss-Prot), F1LRV1 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063132203 ⟸ XM_063276133
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063132201 ⟸ XM_063276131
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063132202 ⟸ XM_063276132
- Peptide Label:	isoform X6

Ensembl Acc Id:

ENSRNOP00000101943 ⟸ ENSRNOT00000153177

Ensembl Acc Id:

ENSRNOP00000102309 ⟸ ENSRNOT00000129167

Ensembl Acc Id:

ENSRNOP00000107620 ⟸ ENSRNOT00000160757

Protein Domains

Peptidase M1 leukotriene A4 hydrolase/aminopeptidase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P69527-F1-model_v2	AlphaFold	P69527	1-822	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700258

Promoter ID:

EPDNEW_R10781

Type:

multiple initiation site

Name:

Npepo_1

Description:

aminopeptidase O

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	17	507,410 - 507,470	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309592	AgrOrtholog
BioCyc Gene	G2FUF-10526	BioCyc
Ensembl Genes	ENSRNOG00000017505	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000023638	ENTREZGENE
	ENSRNOT00000160757	ENTREZGENE
Gene3D-CATH	1.10.390.10	UniProtKB/Swiss-Prot
	1.25.40.320	UniProtKB/Swiss-Prot
	2.60.40.1730	UniProtKB/Swiss-Prot
	3.30.2010.30	UniProtKB/Swiss-Prot
InterPro	Aminopeptidase_N-like_N	UniProtKB/Swiss-Prot
	AOPep	UniProtKB/Swiss-Prot
	ARM-type_fold	UniProtKB/Swiss-Prot
	M1_LTA-4_hydro/amino_C_sf	UniProtKB/Swiss-Prot
	Peptidase_M1_C	UniProtKB/Swiss-Prot
	Peptidase_M1_dom	UniProtKB/Swiss-Prot
	Peptidase_M4/M1_CTD_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:290963	UniProtKB/Swiss-Prot
NCBI Gene	290963	ENTREZGENE
PANTHER	AMINOPEPTIDASE O	UniProtKB/Swiss-Prot
	PTHR46627	UniProtKB/Swiss-Prot
Pfam	Leuk-A4-hydro_C	UniProtKB/Swiss-Prot
	Peptidase_M1	UniProtKB/Swiss-Prot
PhenoGen	Aopep	PhenoGen
RatGTEx	ENSRNOG00000017505	RatGTEx
SMART	Leuk-A4-hydro_C	UniProtKB/Swiss-Prot
Superfamily-SCOP	Metalloproteases ('zincins'), catalytic domain	UniProtKB/Swiss-Prot
	SSF48371	UniProtKB/Swiss-Prot
	SSF63737	UniProtKB/Swiss-Prot
UniProt	A0A8L2QC72	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0L117_RAT	UniProtKB/TrEMBL
	A0ABK0LGC2_RAT	UniProtKB/TrEMBL
	AMPO_RAT	UniProtKB/Swiss-Prot
	F1LRV1	ENTREZGENE
	P69527	ENTREZGENE
UniProt Secondary	F1LRV1	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2020-08-13	Aopep	aminopeptidase O	Npepo	aminopeptidase O	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-09-11	Npepo	aminopeptidase O	RGD1309592	similar to hypothetical protein FLJ14675	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	RGD1309592	similar to hypothetical protein FLJ14675	RGD1309592_predicted	similar to hypothetical protein FLJ14675 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1309592_predicted	similar to hypothetical protein FLJ14675 (predicted)	LOC290963_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC290963_predicted	similar to hypothetical protein FLJ14675 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM