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Gene: Apol2 (apolipoprotein L2) Rattus norvegicus

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Symbol:

Apol2

Name:

apolipoprotein L2

RGD ID:

1309591

Description:

Predicted to enable lipid binding activity. Predicted to be involved in lipid transport and lipoprotein metabolic process. Predicted to be located in extracellular region. Human ortholog(s) of this gene implicated in schizophrenia. Orthologous to several human genes including APOL2 (apolipoprotein L2); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Apol8; apolipoprotein L 8; apolipoprotein L, 2; apolipoprotein L2-like; apolipoprotein L3-like; LOC100911804; LOC315111

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	APOL2 (apolipoprotein L2)	HGNC	Ensembl, HomoloGene, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Apol8 (apolipoprotein L 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	LOC100982122 (apolipoprotein L2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	LOC100156062 (apolipoprotein L3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	APOL2 (apolipoprotein L2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	APOL3 (apolipoprotein L3)	HGNC	EggNOG, Ensembl, Panther
Homo sapiens (human):	APOL4 (apolipoprotein L4)	HGNC	Ensembl, Panther
Homo sapiens (human):	APOL1 (apolipoprotein L1)	HGNC	Ensembl, Panther
Alliance orthologs ³
Homo sapiens (human):	APOL2 (apolipoprotein L2)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Mus musculus (house mouse):	Apol8 (apolipoprotein L 8)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:cabz01007802.1	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoInspector\|PANTHER)
Danio rerio (zebrafish):	apol1 (apolipoprotein L, 1)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER)
Danio rerio (zebrafish):	si:cabz01007807.1	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoInspector\|PANTHER)
Danio rerio (zebrafish):	si:rp71-1g18.13	Alliance	DIOPT (InParanoid\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	F07F6.7	Alliance	DIOPT (Ensembl Compara\|InParanoid\|PANTHER)
Caenorhabditis elegans (roundworm):	F07F6.8	Alliance	DIOPT (Ensembl Compara\|InParanoid\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	111,211,944 - 111,219,209 (-)	NCBI		GRCr8
mRatBN7.2	7	109,331,367 - 109,338,632 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	109,331,392 - 109,338,558 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	7	118,727,658 - 118,735,453 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	118,979,608 - 118,983,984 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	7	118,728,617 - 118,732,738 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	118,725,207 - 118,732,485 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	115,668,899 - 115,673,029 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	115,703,128 - 115,711,697 (-)	NCBI
Celera	7	105,672,006 - 105,679,878 (-)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Apol2	Rat	adenylosuccinase lyase deficiency		ISO	APOL2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Adenylosuccinate lyase deficiency	ClinVar	PMID:28492532

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Apol2	Rat	cannabis abuse		ISO	APOL2 (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:17205118
Apol2	Rat	Cocaine-Related Disorders		ISO	APOL2 (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:17205118
Apol2	Rat	phencyclidine abuse		ISO	APOL2 (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:17205118
Apol2	Rat	schizophrenia		ISO	APOL2 (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Apol2	Rat	schizophrenia		ISO	APOL2 (Homo sapiens)	7240710		OMIM

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Apol2	Rat	(-)-epigallocatechin 3-gallate	multiple interactions	ISO	APOL2 (Homo sapiens)	6480464	[potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of APOL2 mRNA	CTD	PMID:22079256
Apol2	Rat	17beta-estradiol	decreases expression	EXP		6480464	Estradiol results in decreased expression of APOL3 mRNA	CTD	PMID:32145629
Apol2	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	EXP		6480464	Tetrachlorodibenzodioxin results in decreased expression of APOL3 mRNA	CTD	PMID:33387578
Apol2	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	EXP		6480464	Tetrachlorodibenzodioxin affects the expression of APOL3 mRNA	CTD	PMID:34747641
Apol2	Rat	2,4-dinitrotoluene	affects expression	EXP		6480464	2 and 4-dinitrotoluene affects the expression of APOL3 mRNA	CTD	PMID:21346803
Apol2	Rat	2,6-dimethoxyphenol	multiple interactions	ISO	APOL2 (Homo sapiens)	6480464	[Sodium Chloride co-treated with pyrogallol 1 more ...	CTD	PMID:38598786
Apol2	Rat	6-propyl-2-thiouracil	decreases expression	EXP		6480464	Propylthiouracil results in decreased expression of APOL3 mRNA	CTD	PMID:24780913
Apol2	Rat	actinomycin D	multiple interactions	ISO	APOL2 (Homo sapiens)	6480464	[Dactinomycin co-treated with nutlin 3] results in increased expression of APOL2 mRNA and [Dactinomycin co-treated with nutlin 3] results in increased expression of APOL2 protein	CTD	PMID:38460933
Apol2	Rat	aflatoxin B1	increases methylation	ISO	APOL2 (Homo sapiens)	6480464	Aflatoxin B1 results in increased methylation of APOL2 3' UTR	CTD	PMID:30157460
Apol2	Rat	all-trans-retinoic acid	increases expression	ISO	APOL2 (Homo sapiens)	6480464	Tretinoin results in increased expression of APOL2 mRNA	CTD	PMID:33167477
Apol2	Rat	amitrole	decreases expression	EXP		6480464	Amitrole results in decreased expression of APOL3 mRNA	CTD	PMID:38685447
Apol2	Rat	antirheumatic drug	decreases expression	ISO	APOL2 (Homo sapiens)	6480464	Antirheumatic Agents results in decreased expression of APOL2 mRNA	CTD	PMID:24449571
Apol2	Rat	aristolochic acid A	increases expression	ISO	APOL2 (Homo sapiens)	6480464	aristolochic acid I results in increased expression of APOL2 mRNA	CTD	PMID:33212167
Apol2	Rat	arsane	multiple interactions	ISO	APOL2 (Homo sapiens)	6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of APOL2 mRNA and [sodium arsenite results in increased abundance of Arsenic] which results in increased expression of APOL2 mRNA	CTD	PMID:39836092
Apol2	Rat	arsenic atom	multiple interactions	ISO	APOL2 (Homo sapiens)	6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of APOL2 mRNA and [sodium arsenite results in increased abundance of Arsenic] which results in increased expression of APOL2 mRNA	CTD	PMID:39836092
Apol2	Rat	arsenite(3-)	multiple interactions	ISO	APOL2 (Homo sapiens)	6480464	arsenite promotes the reaction [G3BP1 protein binds to APOL2 mRNA]	CTD	PMID:32406909
Apol2	Rat	bisphenol A	affects expression	EXP		6480464	bisphenol A affects the expression of APOL3 mRNA	CTD	PMID:25181051 and PMID:30903817
Apol2	Rat	bisphenol A	increases expression	ISO	APOL2 (Homo sapiens)	6480464	bisphenol A results in increased expression of APOL2 protein	CTD	PMID:34186270
Apol2	Rat	bisphenol A	multiple interactions	EXP		6480464	[bisphenol A co-treated with tributyltin] results in decreased expression of APOL2 mRNA	CTD	PMID:31129395
Apol2	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of APOL3 mRNA	CTD	PMID:30816183 more ...
Apol2	Rat	bisphenol AF	increases expression	ISO	APOL2 (Homo sapiens)	6480464	bisphenol AF results in increased expression of APOL2 protein	CTD	PMID:34186270
Apol2	Rat	Bisphenol B	increases expression	ISO	APOL2 (Homo sapiens)	6480464	bisphenol B results in increased expression of APOL2 protein	CTD	PMID:34186270
Apol2	Rat	cisplatin	multiple interactions	ISO	APOL2 (Homo sapiens)	6480464	[Cisplatin co-treated with jinfukang] results in increased expression of APOL2 mRNA	CTD	PMID:27392435
Apol2	Rat	cisplatin	increases expression	ISO	APOL2 (Homo sapiens)	6480464	Cisplatin results in increased expression of APOL2 mRNA	CTD	PMID:27392435
Apol2	Rat	clofibric acid	multiple interactions	EXP		6480464	[Diethylnitrosamine co-treated with Clofibric Acid] affects the expression of APOL3 mRNA	CTD	PMID:17602206
Apol2	Rat	cobalt dichloride	increases expression	ISO	APOL2 (Homo sapiens)	6480464	cobaltous chloride results in increased expression of APOL2 mRNA	CTD	PMID:19320972
Apol2	Rat	cocaine	increases expression	ISO	APOL2 (Homo sapiens)	6480464	Cocaine results in increased expression of APOL2 mRNA	CTD	PMID:17205118
Apol2	Rat	endosulfan	decreases expression	EXP		6480464	Endosulfan results in decreased expression of APOL3 mRNA	CTD	PMID:29391264
Apol2	Rat	ethylparaben	decreases expression	ISO	APOL2 (Homo sapiens)	6480464	ethyl-p-hydroxybenzoate results in decreased expression of APOL2 mRNA	CTD	PMID:37690743
Apol2	Rat	furfural	multiple interactions	ISO	APOL2 (Homo sapiens)	6480464	[Sodium Chloride co-treated with Furaldehyde] results in decreased expression of and affects the localization of APOL2 protein and [Sodium Chloride co-treated with Furaldehyde] results in decreased expression of APOL2 protein	CTD	PMID:38598786
Apol2	Rat	gentamycin	decreases expression	EXP		6480464	Gentamicins results in decreased expression of APOL3 mRNA	CTD	PMID:33387578
Apol2	Rat	ivermectin	decreases expression	ISO	APOL2 (Homo sapiens)	6480464	Ivermectin results in decreased expression of APOL2 protein	CTD	PMID:32959892
Apol2	Rat	leflunomide	decreases expression	ISO	APOL2 (Homo sapiens)	6480464	Leflunomide results in decreased expression of APOL2 mRNA	CTD	PMID:28988120
Apol2	Rat	manganese atom	increases expression	ISO	APOL2 (Homo sapiens)	6480464	Manganese results in increased expression of APOL2 mRNA	CTD	PMID:17175027
Apol2	Rat	manganese atom	multiple interactions	ISO	APOL2 (Homo sapiens)	6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of APOL2 mRNA	CTD	PMID:39836092
Apol2	Rat	manganese(0)	increases expression	ISO	APOL2 (Homo sapiens)	6480464	Manganese results in increased expression of APOL2 mRNA	CTD	PMID:17175027
Apol2	Rat	manganese(0)	multiple interactions	ISO	APOL2 (Homo sapiens)	6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of APOL2 mRNA	CTD	PMID:39836092
Apol2	Rat	manganese(II) chloride	increases expression	ISO	APOL2 (Homo sapiens)	6480464	manganese chloride results in increased expression of APOL2 mRNA	CTD	PMID:17175027
Apol2	Rat	manganese(II) chloride	multiple interactions	ISO	APOL2 (Homo sapiens)	6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of APOL2 mRNA	CTD	PMID:39836092
Apol2	Rat	Monobutylphthalate	increases expression	EXP		6480464	monobutyl phthalate results in increased expression of APOL3 mRNA	CTD	PMID:29162477
Apol2	Rat	N-methyl-4-phenylpyridinium	decreases expression	EXP		6480464	1-Methyl-4-phenylpyridinium results in decreased expression of APOL3 mRNA	CTD	PMID:28801915
Apol2	Rat	N-nitrosodiethylamine	multiple interactions	EXP		6480464	[Diethylnitrosamine co-treated with Clofibric Acid] affects the expression of APOL3 mRNA	CTD	PMID:17602206
Apol2	Rat	nefazodone	decreases expression	EXP		6480464	nefazodone results in decreased expression of APOL3 mRNA	CTD	PMID:24136188
Apol2	Rat	nickel atom	increases expression	ISO	APOL2 (Homo sapiens)	6480464	Nickel results in increased expression of APOL2 mRNA	CTD	PMID:24768652 and PMID:25583101
Apol2	Rat	nickel dichloride	increases expression	ISO	APOL2 (Homo sapiens)	6480464	nickel chloride results in increased expression of APOL2 mRNA	CTD	PMID:21455298
Apol2	Rat	nimesulide	decreases expression	EXP		6480464	nimesulide results in decreased expression of APOL3 mRNA	CTD	PMID:24136188
Apol2	Rat	nitrofen	decreases expression	EXP		6480464	nitrofen results in decreased expression of APOL3 mRNA	CTD	PMID:26720608
Apol2	Rat	Nutlin-3	multiple interactions	ISO	APOL2 (Homo sapiens)	6480464	[Dactinomycin co-treated with nutlin 3] results in increased expression of APOL2 mRNA and [Dactinomycin co-treated with nutlin 3] results in increased expression of APOL2 protein	CTD	PMID:38460933
Apol2	Rat	oxybenzone	increases expression	EXP		6480464	oxybenzone results in increased expression of APOL2 mRNA	CTD	PMID:30316929
Apol2	Rat	paracetamol	decreases expression	EXP		6480464	Acetaminophen results in decreased expression of APOL3 mRNA	CTD	PMID:33387578
Apol2	Rat	paracetamol	decreases expression	ISO	APOL2 (Homo sapiens)	6480464	Acetaminophen results in decreased expression of APOL2 mRNA	CTD	PMID:21420995
Apol2	Rat	perfluorooctanoic acid	decreases expression	ISO	APOL2 (Homo sapiens)	6480464	perfluorooctanoic acid results in decreased expression of APOL2 protein	CTD	PMID:26879310
Apol2	Rat	phencyclidine	increases expression	ISO	APOL2 (Homo sapiens)	6480464	Phencyclidine results in increased expression of APOL2 mRNA	CTD	PMID:17205118
Apol2	Rat	pirinixic acid	decreases expression	EXP		6480464	pirinixic acid results in decreased expression of APOL3 mRNA	CTD	PMID:19162173
Apol2	Rat	potassium chromate	multiple interactions	ISO	APOL2 (Homo sapiens)	6480464	[potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of APOL2 mRNA	CTD	PMID:22079256
Apol2	Rat	potassium chromate	decreases expression	ISO	APOL2 (Homo sapiens)	6480464	potassium chromate(VI) results in decreased expression of APOL2 mRNA	CTD	PMID:22079256
Apol2	Rat	resveratrol	multiple interactions	ISO	APOL2 (Homo sapiens)	6480464	[Plant Extracts co-treated with Resveratrol] results in increased expression of APOL2 mRNA	CTD	PMID:23557933
Apol2	Rat	sodium arsenite	increases expression	ISO	APOL2 (Homo sapiens)	6480464	sodium arsenite results in increased expression of APOL2 mRNA	CTD	PMID:38568856
Apol2	Rat	sodium arsenite	multiple interactions	ISO	APOL2 (Homo sapiens)	6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of APOL2 mRNA and [sodium arsenite results in increased abundance of Arsenic] which results in increased expression of APOL2 mRNA	CTD	PMID:39836092
Apol2	Rat	sodium chloride	multiple interactions	ISO	APOL2 (Homo sapiens)	6480464	[Sodium Chloride co-treated with Furaldehyde] results in decreased expression of and affects the localization of APOL2 protein more ...	CTD	PMID:38598786
Apol2	Rat	tetrachloromethane	decreases expression	EXP		6480464	Carbon Tetrachloride results in decreased expression of APOL3 mRNA	CTD	PMID:31150632
Apol2	Rat	thioacetamide	decreases expression	EXP		6480464	Thioacetamide results in decreased expression of APOL3 mRNA	CTD	PMID:23411599
Apol2	Rat	thioacetamide	increases expression	EXP		6480464	Thioacetamide results in increased expression of APOL2 mRNA	CTD	PMID:34492290
Apol2	Rat	tributylstannane	multiple interactions	EXP		6480464	[bisphenol A co-treated with tributyltin] results in decreased expression of APOL2 mRNA	CTD	PMID:31129395
Apol2	Rat	tributylstannane	decreases expression	EXP		6480464	tributyltin results in decreased expression of APOL2 mRNA	CTD	PMID:31129395
Apol2	Rat	trichloroethene	increases expression	EXP		6480464	Trichloroethylene results in increased expression of APOL2 mRNA	CTD	PMID:33387578
Apol2	Rat	trichostatin A	decreases expression	ISO	APOL2 (Homo sapiens)	6480464	trichostatin A results in decreased expression of APOL2 mRNA	CTD	PMID:28542535
Apol2	Rat	triphenyl phosphate	affects expression	ISO	APOL2 (Homo sapiens)	6480464	triphenyl phosphate affects the expression of APOL2 mRNA	CTD	PMID:37042841
Apol2	Rat	urethane	decreases expression	ISO	APOL2 (Homo sapiens)	6480464	Urethane results in decreased expression of APOL2 mRNA	CTD	PMID:28818685

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Apol2	Rat	biological_process		ND		1598407	07/07: no relevant rat data	RGD
Apol2	Rat	lipid transport	involved_in	IEA	InterPro:IPR008405	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Apol2	Rat	lipoprotein metabolic process	involved_in	IEA	InterPro:IPR008405	1600115	GO_REF:0000002	InterPro	GO_REF:0000002

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Apol2	Rat	extracellular region	located_in	IEA	InterPro:IPR008405	1600115	GO_REF:0000002	InterPro	GO_REF:0000002

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Apol2	Rat	lipid binding	enables	IEA	InterPro:IPR008405	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Apol2	Rat	lipid binding	enables	IBA	PANTHER:PTN001422588 and UniProtKB:O14791	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Apol2	Rat	protein binding	enables	ISO	APOL2 (Homo sapiens)	1624291	UniProtKB:O00258 more ...	RGD	PMID:32296183

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
5.	GOA pipeline	RGD automated data pipeline
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
7.	Comprehensive gene review and curation	RGD comprehensive gene curation

Apol2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	111,211,944 - 111,219,209 (-)	NCBI		GRCr8
mRatBN7.2	7	109,331,367 - 109,338,632 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	109,331,392 - 109,338,558 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	7	118,727,658 - 118,735,453 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	118,979,608 - 118,983,984 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	7	118,728,617 - 118,732,738 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	118,725,207 - 118,732,485 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	115,668,899 - 115,673,029 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	115,703,128 - 115,711,697 (-)	NCBI
Celera	7	105,672,006 - 105,679,878 (-)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

APOL2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	36,226,209 - 36,239,954 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	36,226,209 - 36,239,954 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	22	36,622,255 - 36,636,000 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	34,952,201 - 34,965,946 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	22	34,946,754 - 34,960,500	NCBI
Celera	22	20,424,825 - 20,438,568 (-)	NCBI		Celera
Cytogenetic Map	22	q12.3	NCBI
HuRef	22	19,590,366 - 19,604,109 (-)	NCBI		HuRef
CHM1_1	22	36,581,376 - 36,595,119 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	22	36,686,335 - 36,700,070 (-)	NCBI		T2T-CHM13v2.0

Apol8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	77,629,309 - 77,641,306 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	77,631,998 - 77,641,203 (-)	Ensembl		GRCm39 Ensembl
GRCm38	15	77,745,109 - 77,757,062 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	77,747,798 - 77,757,003 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	77,579,043 - 77,585,659 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	77,575,052 - 77,582,522 (-)	NCBI		MGSCv36	mm8
Celera	15	79,215,063 - 79,221,679 (-)	NCBI		Celera
Cytogenetic Map	15	E1	NCBI
cM Map	15	36.79	NCBI

LOC100982122
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	46,111,536 - 46,125,016 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	48,803,106 - 48,816,584 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	17,172,486 - 17,186,260 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	35,011,137 - 35,024,913 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	35,011,137 - 35,024,913 (-)	Ensembl	panpan1.1		panPan2

LOC100156062
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	5	11,543,551 - 11,567,675 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	9,313,095 - 9,331,836 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

APOL2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	18,945,972 - 18,956,039 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666045	106,942,769 - 106,954,000 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Variants in Apol2
42 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	160
Count of miRNA genes:	106
Interacting mature miRNAs:	113
Transcripts:	ENSRNOT00000074293, ENSRNOT00000075248
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300179	Kidm5	Kidney mass QTL 5	3.51		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	7	43747012	135012528	Rat
1331728	Bp214	Blood pressure QTL 214	2.825		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	80221299	124373579	Rat
1331731	Bp216	Blood pressure QTL 216	2.851		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	102297359	133492884	Rat
2298475	Eau6	Experimental allergic uveoretinitis QTL 6		0.0029	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	7	84257275	129257275	Rat
71114	Niddm14	Non-insulin dependent diabetes mellitus QTL 14	4.5		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	7	84257275	129257275	Rat
1357336	Gluco6	Glucose level QTL 6	3.4		blood glucose amount (VT:0000188)	serum glucose level (CMO:0000543)	7	94811326	116294265	Rat
1357338	Stl17	Serum triglyceride level QTL 17	3.23		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	69736356	112729554	Rat
631687	Hcas1	Hepatocarcinoma susceptibility QTL 1	3.9	0.001	liver integrity trait (VT:0010547)	liver tumorous lesion volume to total liver volume ratio (CMO:0001082)	7	91412594	129807172	Rat
70159	Bp61	Blood pressure QTL 61		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	103146217	116738842	Rat
634331	Pia17	Pristane induced arthritis QTL 17	4.7		joint integrity trait (VT:0010548)	arthritic paw count (CMO:0001460)	7	73829340	130221005	Rat
1358914	Bp266	Blood pressure QTL 266			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	83591953	134666232	Rat
631504	Cm27	Cardiac mass QTL 27	3.45		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	7	44421311	118198041	Rat
634322	Bw12	Body weight QTL 12	0		body mass (VT:0001259)	body weight (CMO:0000012)	7	83153392	128153392	Rat
70173	Niddm19	Non-insulin dependent diabetes mellitus QTL 19	4.33	0.00005	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	7	64002457	135012528	Rat
1549899	Stresp8	Stress response QTL 8	4.37	0.0008	stress-related behavior trait (VT:0010451)	defensive burying duration (CMO:0001961)	7	90482196	135012528	Rat
2317052	Aia17	Adjuvant induced arthritis QTL 17	2.13		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	7	81737938	126737938	Rat
631529	Tls2	T-lymphoma susceptibility QTL 2	0	0.001	thymus integrity trait (VT:0010555)	percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)	7	80221299	109401111	Rat
731176	Glom5	Glomerulus QTL 5	2.5	0.0035	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	7	96670164	135012528	Rat
7411607	Foco15	Food consumption QTL 15		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	75918751	120918751	Rat
2306821	Bp335	Blood pressure QTL 335		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	106571501	135012528	Rat
1558655	Swd4	Spike wave discharge measurement QTL 4	3.68	0.0002	brain electrophysiology trait (VT:0010557)	brain spike-and-wave discharge severity grade (CMO:0001988)	7	86983365	131983365	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	924703	115097879	Rat
1331768	Kidm10	Kidney mass QTL 10	4.62096		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	7	80221299	125221299	Rat
61357	Bp38	Blood pressure QTL 38	1.6	0.052	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	41333674	119109060	Rat
2313102	Bmd79	Bone mineral density QTL 79	2.3	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	7	94811085	116738842	Rat
731174	Uae23	Urinary albumin excretion QTL 23	2.4	0.0042	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	7	104603555	135012528	Rat
2316947	Rf58	Renal function QTL 58	7.8		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	7	68938720	113886318	Rat
1331746	Kidm9	Kidney mass QTL 9	3.934		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	7	80221299	112308525	Rat
7411654	Foco25	Food consumption QTL 25	9.3	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	75918751	120918751	Rat
2316955	Stl24	Serum triglyceride level QTL 24	7.1		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	7	68938720	113886318	Rat
2299163	Iddm34	Insulin dependent diabetes mellitus QTL 34	2.71		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	7	91281130	135012528	Rat
2316952	Pur22	Proteinuria QTL 22	5.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	7	68938720	113886318	Rat
631540	Bw9	Body weight QTL 9	4.5		body mass (VT:0001259)	body weight (CMO:0000012)	7	69736226	117455174	Rat
1358891	Bp265	Blood pressure QTL 265	2.21		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	83591953	134666232	Rat

RH94614

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	109,344,893 - 109,345,018 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	118,992,427 - 118,992,551	NCBI	Rnor6.0
Rnor_6.0	7	118,741,181 - 118,741,305	NCBI	Rnor6.0
Rnor_5.0	7	118,988,103 - 118,988,227	UniSTS	Rnor5.0
Rnor_5.0	7	118,738,730 - 118,738,854	UniSTS	Rnor5.0
RGSC_v3.4	7	115,681,472 - 115,681,596	UniSTS	RGSC3.4
Celera	7	105,685,604 - 105,685,728	UniSTS
RH 3.4 Map	7	811.2	UniSTS
Cytogenetic Map	7	q34	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

hemolymphoid system	mesenchyme	mesoderm
1	1	1


RefSeq Transcripts	NM_001432640	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001075828	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226145	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226148	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226150	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226151	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241942	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241944	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241946	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241947	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765644	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765645	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008776511	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008776512	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008776513	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017603454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080557	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080558	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_235465	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000074293 ⟹ ENSRNOP00000067230

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	109,331,392 - 109,338,012 (-)	Ensembl
Rnor_6.0 Ensembl	7	118,728,617 - 118,732,738 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000075248 ⟹ ENSRNOP00000066906

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	109,331,392 - 109,338,558 (-)	Ensembl
Rnor_6.0 Ensembl	7	118,979,608 - 118,983,984 (-)	Ensembl

RefSeq Acc Id:

XM_006241942 ⟹ XP_006242004

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	111,211,944 - 111,219,095 (-)	NCBI
mRatBN7.2	7	109,331,367 - 109,338,276 (-)	NCBI
Rnor_6.0	7	118,727,658 - 118,735,452 (-)	NCBI
Rnor_5.0	7	118,725,207 - 118,732,485 (-)	NCBI

Sequence:

show sequence

TAAATCCCCAACCCCCAGAACCTGTGTTTTCAACTGATGGACACATCGTTTGTGCTGCTGACACCCCAAAGGCCACTGCCCACCTGTGGGATGGGGTTGGCGTCTCTACAGTGGGAGGAAGGTGCCAC
AGCCACTGTGGGGAGATGAAGGGTCAGGAAGAATAGAAGTGTCTCACTGTGGAGTGTGAAAAGTCTCACTAGAGGGTCAGTCACAGCAAAGACGTGGAGGTGTCACAGTCAGTGGGGCAGGATGCACT
TGAAGGTGTATGATAGAATTGGATGGTTGGGAGGGAAGGAGGGAGGACAGAGGGGCTGCAGCAGGCTTGAGGCCTGGAGTTCTGGCTAGAGGGGCTTCAACATGACCCTGAAAGGTCATCAGGGACCC
CTTAGAAGGAGCAAGCTGTCTTCACTTCCTCCCTCCCTACCCTGAGGATGCCCTGAGAAGGGGTGGGTCGGGCTTTGCTTGATTGCTGGAGCTCCAGCTGGGAAGAAGAGGGTTCCTATCAGGGCTGC
ACAGCTGGCCAGAAGCAGGGCGGGGTAGTCCTTCCTGGAACAGCCTTTCTATAAACCGAGTCACAGCCGCGTTAAGAGGTCCACTGTGCCCATATTAGCACCCGGCTACAGCAGCACGGGACCAGGTC
AGTGCAAGGCTTTACTGAGGGGCCAAAGAATTGAGACTGGGGGCTTTCTTTGCATATGAACTTCTCTGCCTGGGGGTGGGGAGTGAGTAGTCACCACTAAGACAAGAATAACAGAGCAAGAAGATTTT
ATCTGCTTATGAAAGGACAGAATATTGATGAACCTTCTGAGAAGACATTGAGAAACTCTCCTCCTTGTTGCTCTTGCAGGAACTGGGGTTCTTGGTCCTGGCGGCTGGTAGGTGCCTTCCCAGAGCTC
CAGAGAGTTTGTTTTCTCCTCCTTGCAGCTTGGGGCAGAGATCCTGCATTTGACACCATGGACCCTTCAGATGGCGAGGACTCTCCAGCAAGCAGAACCTTCATTGAGGAAGCCACTGAGTATCTGCA
GCACACGTCGGGCAGGGACGACCTGAAGCTGCTGCTGACTGAAGATGGAGCCTGGGAGGCCTTTGTGGCTGAGGCTGAGTTGTCCAGAGCTGACGCAGACACTTTACGTGATGCCCTCAATGCGCTCA
CAGCAAACATGGCTGAGGAAGACCAGAACAGGCTCCAACATGACCTGCAGGATGTGGAGAGGTTCATAGATGTGTTTCCCCAGGTGAAACTGGAGCTGGAGAGACACGTCAGGAAGCTTCGCACCCTT
GCAGACAAGGTTGACAAGGTTCACAGGGACTGCACCATTTCCAAGGTGGTAGCTGGCTCTACCAGTACTGTGTCTGGAGTCCTGACCCTCCTTGGCCTCGCTCTGGTACCTGTGACAGCTGGGGTCAG
TCTGGTGCTCTTGGCAACAGGGATGGGTCTGGGAGCAGCAGCGGCTGTGACTAGTGTCTCCACGGGTATCGTGGACTACACAAGTAAGTCATCAGCCCAAACAGAAGCCAGCCACCTGGTGTCAACCA
GCATGGTTAAAGTGAAGATGGCTGCAGAGGCCGTGGTTTATTCAGGACCCCAAGTCTTTTCCTTATCTGAGAGTTGCTGCCGAGTCCTACGGTGCATTGAGCAGAGCGTCTATGCCATCAAGCTTACC
AAAGCCAACCCTGCCTTAGCAGCTAGTGTCAAGCGCCTCATGACCGTGGGAAGCATTTCTGCCCAAAGCGATAAGCATGTGAAGAAAGCCTTTAAAGGCACTGCCCTGGCAATGAGCAGAAGAACCCG
GATCATGGGCATAGCCACCGCAGGTGTGTCCCTCATTGGGGATGTGATCAGCCTGGTGAAAGAGTCCAAGAATTTGTACAAGGGCGCAAAAGCAAAGTCTGCCGAGGAGTTGAGGCAGCAGGCTCGGG
AGCTGGAGGAGAAATTGGAGGTGCTTGTCCAGATCTATGACGGTTTGCAGTCAGGCTCAACTCAGTCGTCCTAGATGACAGTGGTGGTGGTGATGAGTGGGGGTGATGACAGAGTGGGCACAAGAGTT
GTCAAGGGACCAGGGTGCTCTTGAGGACCAATGAAATTCTATTGACTCTCTCTAGGGTGTGCTGGGATGGTGATTGATTTAGGGCTGGGGAGTGACCCAGATTGGACTGACAGGTCAAGAGATTTTGT
AGCATGTCCAGGTCGGCCAGCCTGTGGTCATGAGACATACCTTTTCAGAGGCACAGCTTCCTCAGGAGACGGGGGAGGGGGATATTGGGGGAGGGTGATGGACAAGACCACCTCTCTGCTCATCTTCC
TCTGTTACCCTGTGTTCTATGTAGACTTTAGCTCAAAGAATATTAGCCAACTACTCTAGGAAAACGGGGCATCCCAGACTGAAGGTCCCAAAGTCATAGGAAAGGAAAACAAGGCATTAGAGCAGGGT
TTAGGATGTGGGATTGGAGAGCATCCACCCTTATCCTAACCACCTAACAGCTAGATCCACAGCCCCTTCTGTGAGGCAATGTACTCGGTCCAGGGGTAGAGCACAGCCTCGTAGGAGGCCCAGAGGTT
ATTCTGCTCATAGATCAGCACCAGAGGAATCAGGAGGTTAACACCAGATTTATTCCTTCAAAGGAAGGGATGTACAACCTGTTATCTGCCCAGAAGGTTGGGAGCAGATATGGTTAATAGTTTGGTGA
CCCTTTATGCTATTCTGTGTCTAAGACCACACCAGATCCTTCCTCTGGACCTTTATTGTGAACTTGTCCACCTATAGAACCCATCTTTATGAAAGAGGTCATGTGTACAGAAAGAGTTTGATGTAGTC
ATGTCGTGAGCTTTATTGTGCACACAGATTGAGTTAATTATTACCAAGAAAGTGTTGCCCAACTTGTGGTATGCTTCAATATGCCTAAAATAAACTACCTGGGGCAAGATCCCAGCAGTTTGAACCAA

hide sequence

RefSeq Acc Id:

XM_006241944 ⟹ XP_006242006

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	111,211,944 - 111,219,177 (-)	NCBI
mRatBN7.2	7	109,331,367 - 109,338,598 (-)	NCBI
Rnor_6.0	7	118,727,658 - 118,735,176 (-)	NCBI
Rnor_5.0	7	118,725,207 - 118,732,485 (-)	NCBI

Sequence:

show sequence

GGATGGTTGGGAGGGAAGGAGGGAGGACAGAGGGGCTGCAGCAGGCTTGAGGCCTGGAGTTCTGGCTAGAGGGGCTTCAACATGACCCTGAAAGGTCATCAGGGACCCCTTAGAAGGAGCAAGCTGTC
TTCACTTCCTCCCTCCCTACCCTGAGGATGCCCTGAGAAGGGGTGGGTCGGGCTTTGCTTGATTGCTGGAGCTCCAGCTGGGAAGAAGAGGGTTCCTATCAGGGCTGCACAGCTGGCCAGAAGCAGGG
CGGGGTAGTCCTTCCTGGAACAGCCTTTCTATAAACCGAGTCACAGCCGCGTTAAGAGGTCCACTGTGCCCATATTAGCACCCGGCTACAGCAGCACGGGACCAGTTTGTTTTCTCCTCCTTGCAGCT
TGGGGCAGAGATCCTGCATTTGACACCATGGACCCTTCAGATGGCGAGGACTCTCCAGCAAGCAGAACCTTCATTGAGGAAGCCACTGAGTATCTGCAGCACACGTCGGGCAGGGACGACCTGAAGCT
GCTGCTGACTGAAGATGGAGCCTGGGAGGCCTTTGTGGCTGAGGCTGAGTTGTCCAGAGCTGACGCAGACACTTTACGTGATGCCCTCAATGCGCTCACAGCAAACATGGCTGAGGAAGACCAGAACA
GGCTCCAACATGACCTGCAGGATGTGGAGAGGTTCATAGATGTGTTTCCCCAGGTGAAACTGGAGCTGGAGAGACACGTCAGGAAGCTTCGCACCCTTGCAGACAAGGTTGACAAGGTTCACAGGGAC
TGCACCATTTCCAAGGTGGTAGCTGGCTCTACCAGTACTGTGTCTGGAGTCCTGACCCTCCTTGGCCTCGCTCTGGTACCTGTGACAGCTGGGGTCAGTCTGGTGCTCTTGGCAACAGGGATGGGTCT
GGGAGCAGCAGCGGCTGTGACTAGTGTCTCCACGGGTATCGTGGACTACACAAGTAAGTCATCAGCCCAAACAGAAGCCAGCCACCTGGTGTCAACCAGCATGGTTAAAGTGAAGATGGCTGCAGAGG
CCGTGGTTTATTCAGGACCCCAAGTCTTTTCCTTATCTGAGAGTTGCTGCCGAGTCCTACGGTGCATTGAGCAGAGCGTCTATGCCATCAAGCTTACCAAAGCCAACCCTGCCTTAGCAGCTAGTGTC
AAGCGCCTCATGACCGTGGGAAGCATTTCTGCCCAAAGCGATAAGCATGTGAAGAAAGCCTTTAAAGGCACTGCCCTGGCAATGAGCAGAAGAACCCGGATCATGGGCATAGCCACCGCAGGTGTGTC
CCTCATTGGGGATGTGATCAGCCTGGTGAAAGAGTCCAAGAATTTGTACAAGGGCGCAAAAGCAAAGTCTGCCGAGGAGTTGAGGCAGCAGGCTCGGGAGCTGGAGGAGAAATTGGAGGTGCTTGTCC
AGATCTATGACGGTTTGCAGTCAGGCTCAACTCAGTCGTCCTAGATGACAGTGGTGGTGGTGATGAGTGGGGGTGATGACAGAGTGGGCACAAGAGTTGTCAAGGGACCAGGGTGCTCTTGAGGACCA
ATGAAATTCTATTGACTCTCTCTAGGGTGTGCTGGGATGGTGATTGATTTAGGGCTGGGGAGTGACCCAGATTGGACTGACAGGTCAAGAGATTTTGTAGCATGTCCAGGTCGGCCAGCCTGTGGTCA
TGAGACATACCTTTTCAGAGGCACAGCTTCCTCAGGAGACGGGGGAGGGGGATATTGGGGGAGGGTGATGGACAAGACCACCTCTCTGCTCATCTTCCTCTGTTACCCTGTGTTCTATGTAGACTTTA
GCTCAAAGAATATTAGCCAACTACTCTAGGAAAACGGGGCATCCCAGACTGAAGGTCCCAAAGTCATAGGAAAGGAAAACAAGGCATTAGAGCAGGGTTTAGGATGTGGGATTGGAGAGCATCCACCC
TTATCCTAACCACCTAACAGCTAGATCCACAGCCCCTTCTGTGAGGCAATGTACTCGGTCCAGGGGTAGAGCACAGCCTCGTAGGAGGCCCAGAGGTTATTCTGCTCATAGATCAGCACCAGAGGAAT
CAGGAGGTTAACACCAGATTTATTCCTTCAAAGGAAGGGATGTACAACCTGTTATCTGCCCAGAAGGTTGGGAGCAGATATGGTTAATAGTTTGGTGACCCTTTATGCTATTCTGTGTCTAAGACCAC
ACCAGATCCTTCCTCTGGACCTTTATTGTGAACTTGTCCACCTATAGAACCCATCTTTATGAAAGAGGTCATGTGTACAGAAAGAGTTTGATGTAGTCATGTCGTGAGCTTTATTGTGCACACAGATT
GAGTTAATTATTACCAAGAAAGTGTTGCCCAACTTGTGGTATGCTTCAATATGCCTAAAATAAACTACCTGGGGCAAGATCCCAGCAGTTTGAACCAA

hide sequence

RefSeq Acc Id:

XM_006241946 ⟹ XP_006242008

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	111,211,944 - 111,219,190 (-)	NCBI
mRatBN7.2	7	109,331,367 - 109,338,612 (-)	NCBI
Rnor_6.0	7	118,727,658 - 118,735,452 (-)	NCBI
Rnor_5.0	7	118,725,207 - 118,732,485 (-)	NCBI

Sequence:

show sequence

TAAATCCCCAACCCCCAGAACCTGTGTTTTCAACTGATGGACACATCGTTTGTGCTGCTGACACCCCAAAGGCCACTGCCCACCTGTGGGATGGGGTTGGCGTCTCTACAGTGGGAGGAAGGTGCCAC
AGCCACTGTGGGGAGATGAAGGGTCAGGAAGAATAGAAGTGTCTCACTGTGGAGTGTGAAAAGTCTCACTAGAGGGTCAGTCACAGCAAAGACGTGGAGGTGTCACAGTCAGTGGGGCAGGATGCACT
TGAAGGTGTATGATAGAATTGGATGGTTGGGAGGGAAGGAGGGAGGACAGAGGGGCTGCAGCAGGCTTGAGGCCTGGAGTTCTGGCTAGAGGGGCTTCAACATGACCCTGAAAGGTCATCAGGGACCC
CTTAGAAGGAGCAAGCTGTCTTCACTTCCTCCCTCCCTACCCTGAGGATGCCCTGAGAAGGGGTGGGTCGGGCTTTGCTTGATTGCTGGAGCTCCAGCTGGGAAGAAGAGGGTTCCTATCAGGGCTGC
ACAGCTGGCCAGAAGCAGGGCGGGGTAGTCCTTCCTGGAACAGCCTTTCTATAAACCGAGTCACAGCCGCGTTAAGAGGTCCACTGTGCCCATATTAGCACCCGGCTACAGCAGCACGGGACCAGCTT
GGGGCAGAGATCCTGCATTTGACACCATGGACCCTTCAGATGGCGAGGACTCTCCAGCAAGCAGAACCTTCATTGAGGAAGCCACTGAGTATCTGCAGCACACGTCGGGCAGGGACGACCTGAAGCTG
CTGCTGACTGAAGATGGAGCCTGGGAGGCCTTTGTGGCTGAGGCTGAGTTGTCCAGAGCTGACGCAGACACTTTACGTGATGCCCTCAATGCGCTCACAGCAAACATGGCTGAGGAAGACCAGAACAG
GCTCCAACATGACCTGCAGGATGTGGAGAGGTTCATAGATGTGTTTCCCCAGGTGAAACTGGAGCTGGAGAGACACGTCAGGAAGCTTCGCACCCTTGCAGACAAGGTTGACAAGGTTCACAGGGACT
GCACCATTTCCAAGGTGGTAGCTGGCTCTACCAGTACTGTGTCTGGAGTCCTGACCCTCCTTGGCCTCGCTCTGGTACCTGTGACAGCTGGGGTCAGTCTGGTGCTCTTGGCAACAGGGATGGGTCTG
GGAGCAGCAGCGGCTGTGACTAGTGTCTCCACGGGTATCGTGGACTACACAAGTAAGTCATCAGCCCAAACAGAAGCCAGCCACCTGGTGTCAACCAGCATGGTTAAAGTGAAGATGGCTGCAGAGGC
CGTGGTTTATTCAGGACCCCAAGTCTTTTCCTTATCTGAGAGTTGCTGCCGAGTCCTACGGTGCATTGAGCAGAGCGTCTATGCCATCAAGCTTACCAAAGCCAACCCTGCCTTAGCAGCTAGTGTCA
AGCGCCTCATGACCGTGGGAAGCATTTCTGCCCAAAGCGATAAGCATGTGAAGAAAGCCTTTAAAGGCACTGCCCTGGCAATGAGCAGAAGAACCCGGATCATGGGCATAGCCACCGCAGGTGTGTCC
CTCATTGGGGATGTGATCAGCCTGGTGAAAGAGTCCAAGAATTTGTACAAGGGCGCAAAAGCAAAGTCTGCCGAGGAGTTGAGGCAGCAGGCTCGGGAGCTGGAGGAGAAATTGGAGGTGCTTGTCCA
GATCTATGACGGTTTGCAGTCAGGCTCAACTCAGTCGTCCTAGATGACAGTGGTGGTGGTGATGAGTGGGGGTGATGACAGAGTGGGCACAAGAGTTGTCAAGGGACCAGGGTGCTCTTGAGGACCAA
TGAAATTCTATTGACTCTCTCTAGGGTGTGCTGGGATGGTGATTGATTTAGGGCTGGGGAGTGACCCAGATTGGACTGACAGGTCAAGAGATTTTGTAGCATGTCCAGGTCGGCCAGCCTGTGGTCAT
GAGACATACCTTTTCAGAGGCACAGCTTCCTCAGGAGACGGGGGAGGGGGATATTGGGGGAGGGTGATGGACAAGACCACCTCTCTGCTCATCTTCCTCTGTTACCCTGTGTTCTATGTAGACTTTAG
CTCAAAGAATATTAGCCAACTACTCTAGGAAAACGGGGCATCCCAGACTGAAGGTCCCAAAGTCATAGGAAAGGAAAACAAGGCATTAGAGCAGGGTTTAGGATGTGGGATTGGAGAGCATCCACCCT
TATCCTAACCACCTAACAGCTAGATCCACAGCCCCTTCTGTGAGGCAATGTACTCGGTCCAGGGGTAGAGCACAGCCTCGTAGGAGGCCCAGAGGTTATTCTGCTCATAGATCAGCACCAGAGGAATC
AGGAGGTTAACACCAGATTTATTCCTTCAAAGGAAGGGATGTACAACCTGTTATCTGCCCAGAAGGTTGGGAGCAGATATGGTTAATAGTTTGGTGACCCTTTATGCTATTCTGTGTCTAAGACCACA
CCAGATCCTTCCTCTGGACCTTTATTGTGAACTTGTCCACCTATAGAACCCATCTTTATGAAAGAGGTCATGTGTACAGAAAGAGTTTGATGTAGTCATGTCGTGAGCTTTATTGTGCACACAGATTG
AGTTAATTATTACCAAGAAAGTGTTGCCCAACTTGTGGTATGCTTCAATATGCCTAAAATAAACTACCTGGGGCAAGATCCCAGCAGTTTGAACCAA

hide sequence

RefSeq Acc Id:

XM_006241948 ⟹ XP_006242010

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	111,211,944 - 111,219,131 (-)	NCBI
mRatBN7.2	7	109,331,367 - 109,338,548 (-)	NCBI
Rnor_6.0	7	118,727,658 - 118,735,452 (-)	NCBI
Rnor_5.0	7	118,725,207 - 118,732,485 (-)	NCBI

Sequence:

show sequence

TAAATCCCCAACCCCCAGAACCTGTGTTTTCAACTGATGGACACATCGTTTGTGCTGCTGACACCCCAAAGGCCACTGCCCACCTGTGGGATGGGGTTGGCGTCTCTACAGTGGGAGGAAGGTGCCAC
AGCCACTGTGGGGAGATGAAGGGTCAGGAAGAATAGAAGTGTCTCACTGTGGAGTGTGAAAAGTCTCACTAGAGGGTCAGTCACAGCAAAGACGTGGAGGTGTCACAGTCAGTGGGGCAGGATGCACT
TGAAGGTGTATGATAGAATTGGATGGTTGGGAGGGAAGGAGGGAGGACAGAGGGGCTGCAGCAGGCTTGAGGCCTGGAGTTCTGGCTAGAGGGGCTTCAACATGACCCTGAAAGGTCATCAGGGACCC
CTTAGAAGGAGCAAGCTGTCTTCACTTCCTCCCTCCCTACCCTGAGGATGCCCTGAGAAGGGGTGGGTCGGGCTTTGCTTGATTGCTGGAGCTCCAGCTGGGAAGAAGAGGGTTCCTATCAGGGCTGC
ACAGCTGGCCAGAAGCAGGGCGGGGTAGTCCTTCCTGGAACAGCCTTTCTATAAACCGAGTCACAGCCGCGTTAAGAGGTCCACTGTGCCCATATTAGCACCCGGCTACAGCAGCACGGGACCAGGAA
CTGGGGTTCTTGGTCCTGGCGGCTGTTTGTTTTCTCCTCCTTGCAGCTTGGGGCAGAGATCCTGCATTTGACACCATGGACCCTTCAGATGGCGAGGACTCTCCAGCAAGCAGAACCTTCATTGAGGA
AGCCACTGAGTATCTGCAGCACACGTCGGGCAGGGACGACCTGAAGCTGCTGCTGACTGAAGATGGAGCCTGGGAGGCCTTTGTGGCTGAGGCTGAGTTGTCCAGAGCTGACGCAGACACTTTACGTG
ATGCCCTCAATGCGCTCACAGCAAACATGGCTGAGGAAGACCAGAACAGGCTCCAACATGACCTGCAGGATGTGGAGAGGTTCATAGATGTGTTTCCCCAGGTGAAACTGGAGCTGGAGAGACACGTC
AGGAAGCTTCGCACCCTTGCAGACAAGGTTGACAAGGTTCACAGGGACTGCACCATTTCCAAGGTGGTAGCTGGCTCTACCAGTACTGTGTCTGGAGTCCTGACCCTCCTTGGCCTCGCTCTGGTACC
TGTGACAGCTGGGGTCAGTCTGGTGCTCTTGGCAACAGGGATGGGTCTGGGAGCAGCAGCGGCTGTGACTAGTGTCTCCACGGGTATCGTGGACTACACAAGTAAGTCATCAGCCCAAACAGAAGCCA
GCCACCTGGTGTCAACCAGCATGGTTAAAGTGAAGATGGCTGCAGAGGCCGTGGTTTATTCAGGACCCCAAGTCTTTTCCTTATCTGAGAGTTGCTGCCGAGTCCTACGGTGCATTGAGCAGAGCGTC
TATGCCATCAAGCTTACCAAAGCCAACCCTGCCTTAGCAGCTAGTGTCAAGCGCCTCATGACCGTGGGAAGCATTTCTGCCCAAAGCGATAAGCATGTGAAGAAAGCCTTTAAAGGCACTGCCCTGGC
AATGAGCAGAAGAACCCGGATCATGGGCATAGCCACCGCAGGTGTGTCCCTCATTGGGGATGTGATCAGCCTGGTGAAAGAGTCCAAGAATTTGTACAAGGGCGCAAAAGCAAAGTCTGCCGAGGAGT
TGAGGCAGCAGGCTCGGGAGCTGGAGGAGAAATTGGAGGTGCTTGTCCAGATCTATGACGGTTTGCAGTCAGGCTCAACTCAGTCGTCCTAGATGACAGTGGTGGTGGTGATGAGTGGGGGTGATGAC
AGAGTGGGCACAAGAGTTGTCAAGGGACCAGGGTGCTCTTGAGGACCAATGAAATTCTATTGACTCTCTCTAGGGTGTGCTGGGATGGTGATTGATTTAGGGCTGGGGAGTGACCCAGATTGGACTGA
CAGGTCAAGAGATTTTGTAGCATGTCCAGGTCGGCCAGCCTGTGGTCATGAGACATACCTTTTCAGAGGCACAGCTTCCTCAGGAGACGGGGGAGGGGGATATTGGGGGAGGGTGATGGACAAGACCA
CCTCTCTGCTCATCTTCCTCTGTTACCCTGTGTTCTATGTAGACTTTAGCTCAAAGAATATTAGCCAACTACTCTAGGAAAACGGGGCATCCCAGACTGAAGGTCCCAAAGTCATAGGAAAGGAAAAC
AAGGCATTAGAGCAGGGTTTAGGATGTGGGATTGGAGAGCATCCACCCTTATCCTAACCACCTAACAGCTAGATCCACAGCCCCTTCTGTGAGGCAATGTACTCGGTCCAGGGGTAGAGCACAGCCTC
GTAGGAGGCCCAGAGGTTATTCTGCTCATAGATCAGCACCAGAGGAATCAGGAGGTTAACACCAGATTTATTCCTTCAAAGGAAGGGATGTACAACCTGTTATCTGCCCAGAAGGTTGGGAGCAGATA
TGGTTAATAGTTTGGTGACCCTTTATGCTATTCTGTGTCTAAGACCACACCAGATCCTTCCTCTGGACCTTTATTGTGAACTTGTCCACCTATAGAACCCATCTTTATGAAAGAGGTCATGTGTACAG
AAAGAGTTTGATGTAGTCATGTCGTGAGCTTTATTGTGCACACAGATTGAGTTAATTATTACCAAGAAAGTGTTGCCCAACTTGTGGTATGCTTCAATATGCCTAAAATAAACTACCTGGGGCAAGAT
CCCAGCAGTTTGAACCAA

hide sequence

RefSeq Acc Id:

XM_017595249 ⟹ XP_017450738

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	111,211,944 - 111,219,095 (-)	NCBI
mRatBN7.2	7	109,331,367 - 109,338,518 (-)	NCBI
Rnor_6.0	7	118,727,658 - 118,735,453 (-)	NCBI

Sequence:

show sequence

CTAAATCCCCAACCCCCAGAACCTGTGTTTTCAACTGATGGACACATCGTTTGTGCTGCTGACA
CCCCAAAGGCCACTGCCCACCTGTGGGATGGGGTTGGCGTCTCTACAGTGGGAGGAAGGTGCCACAGCCACTGTGGGGAGATGAAGGGTCAGGAAGAATAGAAGTGTCTCACTGTGGAGTGTGAAAAG
TCTCACTAGAGGGTCAGTCACAGCAAAGACGTGGAGGTGTCACAGTCAGTGGGGCAGGATGCACTTGAAGGTGTATGATAGAATTGGATGGTTGGGAGGGAAGGAGGGAGGACAGAGGGGCTGCAGCA
GGCTTGAGGCCTGGAGTTCTGGCTAGAGGGGCTTCAACATGACCCTGAAAGGTCATCAGGGACCCCTTAGAAGGAGCAAGCTGTCTTCACTTCCTCCCTCCCTACCCTGAGGATGCCCTGAGAAGGGG
TGGGTCGGGCTTTGCTTGATTGCTGGAGCTCCAGCTGGGAAGAAGAGGGTTCCTATCAGGGCTGCACAGCTGGCCAGAAGCAGGGCGGGGTAGTCCTTCCTGGAACAGCCTTTCTATAAACCGAGTCA
CAGCCGCGTTAAGAGGTCCACTGTGCCCATATTAGCACCCGGCTACAGCAGCACGGGACCAGGTCAGTGCAAGGCTTTACTGAGGGGCCAAAGAATTGAGACTGGGGGCTTTCTTTGCATATGAACTT
CTCTGCCTGGGGGTGGGGAGTGAGTAGTCACCACTAAGACAAGAATAACAGAGCAAGAAGATTTTATCTGCTTATGAAAGGACAGAATATTGATGAACCTTCTGAGAAGACATTGAGAAACTCTCCTC
CTTGTTGCTCTTGCAGGAACTGGGGTTCTTGGTCCTGGCGGCTGGTAGGTGCCTTCCCAGAGCTCCAGAGAGGTGGGGAGAGCCAGACAAGTCTTGGTTAAGTTAACCCTGTGGTAGTTAACCCTGTA
ATGGAGTGCCTCGGTGTACCAAGTGTGCATGCAGAGCTGGGCAGGATTGGAAATGGCAGTGAAGCTTGGGGCAGAGATCCTGCATTTGACACCATGGACCCTTCAGATGGCGAGGACTCTCCAGCAAG
CAGAACCTTCATTGAGGAAGCCACTGAGTATCTGCAGCACACGTCGGGCAGGGACGACCTGAAGCTGCTGCTGACTGAAGATGGAGCCTGGGAGGCCTTTGTGGCTGAGGCTGAGTTGTCCAGAGCTG
ACGCAGACACTTTACGTGATGCCCTCAATGCGCTCACAGCAAACATGGCTGAGGAAGACCAGAACAGGCTCCAACATGACCTGCAGGATGTGGAGAGGTTCATAGATGTGTTTCCCCAGGTGAAACTG
GAGCTGGAGAGACACGTCAGGAAGCTTCGCACCCTTGCAGACAAGGTTGACAAGGTTCACAGGGACTGCACCATTTCCAAGGTGGTAGCTGGCTCTACCAGTACTGTGTCTGGAGTCCTGACCCTCCT
TGGCCTCGCTCTGGTACCTGTGACAGCTGGGGTCAGTCTGGTGCTCTTGGCAACAGGGATGGGTCTGGGAGCAGCAGCGGCTGTGACTAGTGTCTCCACGGGTATCGTGGACTACACAAGTAAGTCAT
CAGCCCAAACAGAAGCCAGCCACCTGGTGTCAACCAGCATGGTTAAAGTGAAGATGGCTGCAGAGGCCGTGGTTTATTCAGGACCCCAAGTCTTTTCCTTATCTGAGAGTTGCTGCCGAGTCCTACGG
TGCATTGAGCAGAGCGTCTATGCCATCAAGCTTACCAAAGCCAACCCTGCCTTAGCAGCTAGTGTCAAGCGCCTCATGACCGTGGGAAGCATTTCTGCCCAAAGCGATAAGCATGTGAAGAAAGCCTT
TAAAGGCACTGCCCTGGCAATGAGCAGAAGAACCCGGATCATGGGCATAGCCACCGCAGGTGTGTCCCTCATTGGGGATGTGATCAGCCTGGTGAAAGAGTCCAAGAATTTGTACAAGGGCGCAAAAG
CAAAGTCTGCCGAGGAGTTGAGGCAGCAGGCTCGGGAGCTGGAGGAGAAATTGGAGGTGCTTGTCCAGATCTATGACGGTTTGCAGTCAGGCTCAACTCAGTCGTCCTAGATGACAGTGGTGGTGGTG
ATGAGTGGGGGTGATGACAGAGTGGGCACAAGAGTTGTCAAGGGACCAGGGTGCTCTTGAGGACCAATGAAATTCTATTGACTCTCTCTAGGGTGTGCTGGGATGGTGATTGATTTAGGGCTGGGGAG
TGACCCAGATTGGACTGACAGGTCAAGAGATTTTGTAGCATGTCCAGGTCGGCCAGCCTGTGGTCATGAGACATACCTTTTCAGAGGCACAGCTTCCTCAGGAGACGGGGGAGGGGGATATTGGGGGA
GGGTGATGGACAAGACCACCTCTCTGCTCATCTTCCTCTGTTACCCTGTGTTCTATGTAGACTTTAGCTCAAAGAATATTAGCCAACTACTCTAGGAAAACGGGGCATCCCAGACTGAAGGTCCCAAA
GTCATAGGAAAGGAAAACAAGGCATTAGAGCAGGGTTTAGGATGTGGGATTGGAGAGCATCCACCCTTATCCTAACCACCTAACAGCTAGATCCACAGCCCCTTCTGTGAGGCAATGTACTCGGTCCA
GGGGTAGAGCACAGCCTCGTAGGAGGCCCAGAGGTTATTCTGCTCATAGATCAGCACCAGAGGAATCAGGAGGTTAACACCAGATTTATTCCTTCAAAGGAAGGGATGTACAACCTGTTATCTGCCCA
GAAGGTTGGGAGCAGATATGGTTAATAGTTTGGTGACCCTTTATGCTATTCTGTGTCTAAGACCACACCAGATCCTTCCTCTGGACCTTTATTGTGAACTTGTCCACCTATAGAACCCATCTTTATGA
AAGAGGTCATGTGTACAGAAAGAGTTTGATGTAGTCATGTCGTGAGCTTTATTGTGCACACAGATTGAGTTAATTATTACCAAGAAAGTGTTGCCCAACTTGTGGTATGCTTCAATATGCCTAAAATA
AACTACCTGGGGCAAGATCCCAGCAGTTTGAACCAA

hide sequence

RefSeq Acc Id:

XM_039080557 ⟹ XP_038936485

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	111,211,944 - 111,219,095 (-)	NCBI
mRatBN7.2	7	109,331,367 - 109,338,518 (-)	NCBI

RefSeq Acc Id:

XM_039080558 ⟹ XP_038936486

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	111,211,944 - 111,219,095 (-)	NCBI
mRatBN7.2	7	109,331,367 - 109,338,518 (-)	NCBI

RefSeq Acc Id:

XM_063264681 ⟹ XP_063120751

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	111,211,944 - 111,219,095 (-)	NCBI

RefSeq Acc Id:

XM_235465 ⟹ XP_235465

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	111,211,944 - 111,219,209 (-)	NCBI
mRatBN7.2	7	109,331,367 - 109,338,632 (-)	NCBI
Rnor_6.0	7	118,727,658 - 118,735,453 (-)	NCBI
Rnor_5.0	7	118,725,207 - 118,732,485 (-)	NCBI
RGSC_v3.4	7	115,668,899 - 115,673,029 (-)	RGD

Sequence:

show sequence

CTAAATCCCCAACCCCCAGAACCTGTGTTTTCAACTGATGGACACATCGTTTGTGCTGCTGACA
CCCCAAAGGCCACTGCCCACCTGTGGGATGGGGTTGGCGTCTCTACAGTGGGAGGAAGGTGCCACAGCCACTGTGGGGAGATGAAGGGTCAGGAAGAATAGAAGTGTCTCACTGTGGAGTGTGAAAAG
TCTCACTAGAGGGTCAGTCACAGCAAAGACGTGGAGGTGTCACAGTCAGTGGGGCAGGATGCACTTGAAGGTGTATGATAGAATTGGATGGTTGGGAGGGAAGGAGGGAGGACAGAGGGGCTGCAGCA
GGCTTGAGGCCTGGAGTTCTGGCTAGAGGGGCTTCAACATGACCCTGAAAGGTCATCAGGGACCCCTTAGAAGGAGCAAGCTGTCTTCACTTCCTCCCTCCCTACCCTGAGGATGCCCTGAGAAGGGG
TGGGTCGGGCTTTGCTTGATTGCTGGAGCTCCAGCTGGGAAGAAGAGGGTTCCTATCAGGGCTGCACAGCTGGCCAGAAGCAGGGCGGGGTAGTCCTTCCTGGAACAGCCTTTCTATAAACCGAGTCA
CAGCCGCGTTAAGAGGTCCACTGTGCCCATATTAGCACCCGGCTACAGCAGCACGGGACCAGGAACTGGGGTTCTTGGTCCTGGCGGCTGGTAGGTGCCTTCCCAGAGCTCCAGAGAGGTGGGGAGAG
CCAGACAAGTCTTGGTTAAGTTAACCCTGTGGTAGTTAACCCTGTAATGGAGTGCCTCGGTGTACCAAGTGTGCATGCAGAGCTGGGCAGGATTGGAAATGGCAGTGAAGTTTGTTTTCTCCTCCTTG
CAGCTTGGGGCAGAGATCCTGCATTTGACACCATGGACCCTTCAGATGGCGAGGACTCTCCAGCAAGCAGAACCTTCATTGAGGAAGCCACTGAGTATCTGCAGCACACGTCGGGCAGGGACGACCTG
AAGCTGCTGCTGACTGAAGATGGAGCCTGGGAGGCCTTTGTGGCTGAGGCTGAGTTGTCCAGAGCTGACGCAGACACTTTACGTGATGCCCTCAATGCGCTCACAGCAAACATGGCTGAGGAAGACCA
GAACAGGCTCCAACATGACCTGCAGGATGTGGAGAGGTTCATAGATGTGTTTCCCCAGGTGAAACTGGAGCTGGAGAGACACGTCAGGAAGCTTCGCACCCTTGCAGACAAGGTTGACAAGGTTCACA
GGGACTGCACCATTTCCAAGGTGGTAGCTGGCTCTACCAGTACTGTGTCTGGAGTCCTGACCCTCCTTGGCCTCGCTCTGGTACCTGTGACAGCTGGGGTCAGTCTGGTGCTCTTGGCAACAGGGATG
GGTCTGGGAGCAGCAGCGGCTGTGACTAGTGTCTCCACGGGTATCGTGGACTACACAAGTAAGTCATCAGCCCAAACAGAAGCCAGCCACCTGGTGTCAACCAGCATGGTTAAAGTGAAGATGGCTGC
AGAGGCCGTGGTTTATTCAGGACCCCAAGTCTTTTCCTTATCTGAGAGTTGCTGCCGAGTCCTACGGTGCATTGAGCAGAGCGTCTATGCCATCAAGCTTACCAAAGCCAACCCTGCCTTAGCAGCTA
GTGTCAAGCGCCTCATGACCGTGGGAAGCATTTCTGCCCAAAGCGATAAGCATGTGAAGAAAGCCTTTAAAGGCACTGCCCTGGCAATGAGCAGAAGAACCCGGATCATGGGCATAGCCACCGCAGGT
GTGTCCCTCATTGGGGATGTGATCAGCCTGGTGAAAGAGTCCAAGAATTTGTACAAGGGCGCAAAAGCAAAGTCTGCCGAGGAGTTGAGGCAGCAGGCTCGGGAGCTGGAGGAGAAATTGGAGGTGCT
TGTCCAGATCTATGACGGTTTGCAGTCAGGCTCAACTCAGTCGTCCTAGATGACAGTGGTGGTGGTGATGAGTGGGGGTGATGACAGAGTGGGCACAAGAGTTGTCAAGGGACCAGGGTGCTCTTGAG
GACCAATGAAATTCTATTGACTCTCTCTAGGGTGTGCTGGGATGGTGATTGATTTAGGGCTGGGGAGTGACCCAGATTGGACTGACAGGTCAAGAGATTTTGTAGCATGTCCAGGTCGGCCAGCCTGT
GGTCATGAGACATACCTTTTCAGAGGCACAGCTTCCTCAGGAGACGGGGGAGGGGGATATTGGGGGAGGGTGATGGACAAGACCACCTCTCTGCTCATCTTCCTCTGTTACCCTGTGTTCTATGTAGA
CTTTAGCTCAAAGAATATTAGCCAACTACTCTAGGAAAACGGGGCATCCCAGACTGAAGGTCCCAAAGTCATAGGAAAGGAAAACAAGGCATTAGAGCAGGGTTTAGGATGTGGGATTGGAGAGCATC
CACCCTTATCCTAACCACCTAACAGCTAGATCCACAGCCCCTTCTGTGAGGCAATGTACTCGGTCCAGGGGTAGAGCACAGCCTCGTAGGAGGCCCAGAGGTTATTCTGCTCATAGATCAGCACCAGA
GGAATCAGGAGGTTAACACCAGATTTATTCCTTCAAAGGAAGGGATGTACAACCTGTTATCTGCCCAGAAGGTTGGGAGCAGATATGGTTAATAGTTTGGTGACCCTTTATGCTATTCTGTGTCTAAG
ACCACACCAGATCCTTCCTCTGGACCTTTATTGTGAACTTGTCCACCTATAGAACCCATCTTTATGAAAGAGGTCATGTGTACAGAAAGAGTTTGATGTAGTCATGTCGTGAGCTTTATTGTGCACAC
AGATTGAGTTAATTATTACCAAGAAAGTGTTGCCCAACTTGTGGTATGCTTCAATATGCCTAAAATAAACTACCTGGGGCAAGATCCCAGCAGTTTGAACCAA

hide sequence


Protein RefSeqs	NP_001419569	(Get FASTA)	NCBI Sequence Viewer
	XP_006242004	(Get FASTA)	NCBI Sequence Viewer
	XP_006242006	(Get FASTA)	NCBI Sequence Viewer
	XP_006242008	(Get FASTA)	NCBI Sequence Viewer
	XP_006242010	(Get FASTA)	NCBI Sequence Viewer
	XP_017450738	(Get FASTA)	NCBI Sequence Viewer
	XP_038936485	(Get FASTA)	NCBI Sequence Viewer
	XP_038936486	(Get FASTA)	NCBI Sequence Viewer
	XP_063120751	(Get FASTA)	NCBI Sequence Viewer
	XP_235465	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM15907	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000066906
	ENSRNOP00000066906.3
	ENSRNOP00000067230.3

RefSeq Acc Id:	XP_235465 ⟸ XM_235465
- Peptide Label:	isoform X2
- UniProtKB:	M0RBH1 (UniProtKB/TrEMBL), A6HSG5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MECLGVPSVHAELGRIGNGSEVCFLLLAAWGRDPAFDTMDPSDGEDSPASRTFIEEATEYLQHTSGRDDLKLLLTEDGAWEAFVAEAELSRADADTLRDALNALTANMAEEDQNRLQHDLQDVERFID VFPQVKLELERHVRKLRTLADKVDKVHRDCTISKVVAGSTSTVSGVLTLLGLALVPVTAGVSLVLLATGMGLGAAAAVTSVSTGIVDYTSKSSAQTEASHLVSTSMVKVKMAAEAVVYSGPQVFSLSE SCCRVLRCIEQSVYAIKLTKANPALAASVKRLMTVGSISAQSDKHVKKAFKGTALAMSRRTRIMGIATAGVSLIGDVISLVKESKNLYKGAKAKSAEELRQQARELEEKLEVLVQIYDGLQSGSTQSS hide sequence

RefSeq Acc Id:

XP_006242008 ⟸ XM_006241946

- Peptide Label:

isoform X4

- Sequence:

show sequence

MDPSDGEDSPASRTFIEEATEYLQHTSGRDDLKLLLTEDGAWEAFVAEAELSRADADTLRDALNALTANMAEEDQNRLQHDLQDVERFIDVFPQVKLELERHVRKLRTLADKVDKVHRDCTISKVVAG
STSTVSGVLTLLGLALVPVTAGVSLVLLATGMGLGAAAAVTSVSTGIVDYTSKSSAQTEASHLVSTSMVKVKMAAEAVVYSGPQVFSLSESCCRVLRCIEQSVYAIKLTKANPALAASVKRLMTVGSI
SAQSDKHVKKAFKGTALAMSRRTRIMGIATAGVSLIGDVISLVKESKNLYKGAKAKSAEELRQQARELEEKLEVLVQIYDGLQSGSTQSS

hide sequence

RefSeq Acc Id:	XP_006242006 ⟸ XM_006241944
- Peptide Label:	isoform X4
- UniProtKB:	M0RCB7 (UniProtKB/TrEMBL), A6HSG5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPSDGEDSPASRTFIEEATEYLQHTSGRDDLKLLLTEDGAWEAFVAEAELSRADADTLRDALNALTANMAEEDQNRLQHDLQDVERFIDVFPQVKLELERHVRKLRTLADKVDKVHRDCTISKVVAG STSTVSGVLTLLGLALVPVTAGVSLVLLATGMGLGAAAAVTSVSTGIVDYTSKSSAQTEASHLVSTSMVKVKMAAEAVVYSGPQVFSLSESCCRVLRCIEQSVYAIKLTKANPALAASVKRLMTVGSI SAQSDKHVKKAFKGTALAMSRRTRIMGIATAGVSLIGDVISLVKESKNLYKGAKAKSAEELRQQARELEEKLEVLVQIYDGLQSGSTQSS hide sequence

RefSeq Acc Id:	XP_006242010 ⟸ XM_006241948
- Peptide Label:	isoform X4
- UniProtKB:	M0RCB7 (UniProtKB/TrEMBL), A6HSG5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPSDGEDSPASRTFIEEATEYLQHTSGRDDLKLLLTEDGAWEAFVAEAELSRADADTLRDALNALTANMAEEDQNRLQHDLQDVERFIDVFPQVKLELERHVRKLRTLADKVDKVHRDCTISKVVAG STSTVSGVLTLLGLALVPVTAGVSLVLLATGMGLGAAAAVTSVSTGIVDYTSKSSAQTEASHLVSTSMVKVKMAAEAVVYSGPQVFSLSESCCRVLRCIEQSVYAIKLTKANPALAASVKRLMTVGSI SAQSDKHVKKAFKGTALAMSRRTRIMGIATAGVSLIGDVISLVKESKNLYKGAKAKSAEELRQQARELEEKLEVLVQIYDGLQSGSTQSS hide sequence

RefSeq Acc Id:	XP_006242004 ⟸ XM_006241942
- Peptide Label:	isoform X1
- UniProtKB:	A6HSG5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKGQNIDEPSEKTLRNSPPCCSCRNWGSWSWRLVGAFPELQRVCFLLLAAWGRDPAFDTMDPSDGEDSPASRTFIEEATEYLQHTSGRDDLKLLLTEDGAWEAFVAEAELSRADADTLRDALNALTAN MAEEDQNRLQHDLQDVERFIDVFPQVKLELERHVRKLRTLADKVDKVHRDCTISKVVAGSTSTVSGVLTLLGLALVPVTAGVSLVLLATGMGLGAAAAVTSVSTGIVDYTSKSSAQTEASHLVSTSMV KVKMAAEAVVYSGPQVFSLSESCCRVLRCIEQSVYAIKLTKANPALAASVKRLMTVGSISAQSDKHVKKAFKGTALAMSRRTRIMGIATAGVSLIGDVISLVKESKNLYKGAKAKSAEELRQQARELE EKLEVLVQIYDGLQSGSTQSS hide sequence

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-M0RCB7-F1-model_v2	AlphaFold	M0RCB7	1-344	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-32867	BioCyc
Ensembl Genes	ENSRNOG00000048451	Ensembl
	ENSRNOG00000048970	Ensembl
	ENSRNOG00000070111	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000074293.3	UniProtKB/TrEMBL
	ENSRNOT00000075248	ENTREZGENE
	ENSRNOT00000075248.3	UniProtKB/TrEMBL
InterPro	ApoL	UniProtKB/TrEMBL
NCBI Gene	315111	ENTREZGENE
PANTHER	APOLIPOPROTEIN L 8	UniProtKB/TrEMBL
	PTHR14096	UniProtKB/TrEMBL
Pfam	ApoL	UniProtKB/TrEMBL
PhenoGen	Apol2	PhenoGen
RatGTEx	ENSRNOG00000048451	RatGTEx
	ENSRNOG00000048970	RatGTEx
	ENSRNOG00000070111	RatGTEx
UniProt	A6HSG5	ENTREZGENE, UniProtKB/TrEMBL
	M0RBH1	ENTREZGENE, UniProtKB/TrEMBL
	M0RCB7	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2024-03-29	Apol2	apolipoprotein L2	Apol2	apolipoprotein L, 2	Name changed	629549	APPROVED
2022-06-02	Apol2	apolipoprotein L, 2	Apol2	apolipoprotein L, 2	Data merged from RGD:149736259	737654	PROVISIONAL
2021-08-09	Apol2	apolipoprotein L, 2			Symbol and Name status set to provisional	45752	PROVISIONAL
2021-03-09	Apol2	apolipoprotein L, 2	LOC100911804	apolipoprotein L3-like	Data merged from RGD:6490440	737654	PROVISIONAL
2012-07-05	LOC100911804	apolipoprotein L3-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-09-25	Apol2	apolipoprotein L, 2	Apol8	apolipoprotein L 8	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-03	Apol8	apolipoprotein L 8	Apol2_predicted	apolipoprotein L, 2 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-12	Apol2_predicted	apolipoprotein L, 2 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM