Nol8 (nucleolar protein 8) - Rat Genome Database

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Gene: Nol8 (nucleolar protein 8) Rattus norvegicus
Analyze
Symbol: Nol8
Name: nucleolar protein 8
RGD ID: 1309551
Description: Predicted to enable RNA binding activity. Predicted to be involved in protein localization to nucleolus and rRNA processing. Predicted to act upstream of or within cellular response to leukemia inhibitory factor. Predicted to be located in nucleus. Predicted to be active in nucleolus. Orthologous to human NOL8 (nucleolar protein 8); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC361221; NEWGENE_1309551
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81715,196,881 - 15,220,265 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1715,196,881 - 15,220,202 (-)EnsemblGRCr8
mRatBN7.21714,990,394 - 15,013,784 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1714,990,417 - 15,013,848 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1714,877,396 - 14,900,711 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01716,482,452 - 16,505,767 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01714,804,190 - 14,827,505 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01714,565,794 - 14,589,154 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1714,565,794 - 14,589,154 (-)Ensemblrn6Rnor6.0
Rnor_6.0 Ensembl1715,405,860 - 15,429,322 (-)Ensemblrn6Rnor6.0
Rnor_5.01716,618,115 - 16,641,480 (-)NCBIRnor_5.0Rnor_5.0rn5
Rnor_5.01717,464,312 - 17,487,883 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41720,945,380 - 20,968,740 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1714,722,004 - 14,745,364 (-)NCBICelera
RGSC_v3.11720,945,356 - 20,968,168 (-)NCBI
Cytogenetic Map17p14NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
(-)-alpha-phellandrene  (ISO)
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
2-methylcholine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-amino-2,6-dinitrotoluene  (EXP)
4-hydroxyphenyl retinamide  (ISO)
acrolein  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (EXP)
alpha-phellandrene  (ISO)
alpha-pinene  (ISO)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
beta-lapachone  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
bromobenzene  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
caffeine  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (ISO)
chromium(6+)  (ISO)
cisplatin  (ISO)
clofibric acid  (EXP)
coumarin  (EXP,ISO)
cyclosporin A  (ISO)
DDE  (ISO)
dexamethasone  (ISO)
dibutyl phthalate  (EXP)
dicrotophos  (ISO)
diethylstilbestrol  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
enzyme inhibitor  (ISO)
fluoranthene  (ISO)
FR900359  (ISO)
furan  (EXP)
hexadecanoic acid  (ISO)
hydrogen peroxide  (ISO)
indometacin  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
N-nitrosodiethylamine  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
piroxicam  (ISO)
propiconazole  (ISO)
Salinomycin  (ISO)
selenium atom  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (EXP)
tacrolimus hydrate  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (EXP)
triphenyl phosphate  (EXP,ISO)
troglitazone  (ISO)
valproic acid  (ISO)
vitamin E  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleolus  (IBA,IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:14660641   PMID:15132771   PMID:16963496   PMID:20439489   PMID:22658674   PMID:22681889  


Genomics

Comparative Map Data
Nol8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81715,196,881 - 15,220,265 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1715,196,881 - 15,220,202 (-)EnsemblGRCr8
mRatBN7.21714,990,394 - 15,013,784 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1714,990,417 - 15,013,848 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1714,877,396 - 14,900,711 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01716,482,452 - 16,505,767 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01714,804,190 - 14,827,505 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01714,565,794 - 14,589,154 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1714,565,794 - 14,589,154 (-)Ensemblrn6Rnor6.0
Rnor_6.0 Ensembl1715,405,860 - 15,429,322 (-)Ensemblrn6Rnor6.0
Rnor_5.01716,618,115 - 16,641,480 (-)NCBIRnor_5.0Rnor_5.0rn5
Rnor_5.01717,464,312 - 17,487,883 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41720,945,380 - 20,968,740 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1714,722,004 - 14,745,364 (-)NCBICelera
RGSC_v3.11720,945,356 - 20,968,168 (-)NCBI
Cytogenetic Map17p14NCBI
NOL8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38992,297,358 - 92,325,350 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl992,297,358 - 92,325,636 (-)Ensemblhg38GRCh38
GRCh37995,059,640 - 95,087,632 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36994,099,461 - 94,127,659 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34992,139,195 - 92,167,393NCBI
Celera965,495,949 - 65,524,185 (-)NCBICelera
Cytogenetic Map9q22.31NCBI
HuRef964,737,419 - 64,765,656 (-)NCBIHuRef
CHM1_1995,206,075 - 95,234,299 (-)NCBICHM1_1
T2T-CHM13v2.09104,463,887 - 104,491,879 (-)NCBIT2T-CHM13v2.0
Nol8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391349,806,554 - 49,832,492 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1349,806,554 - 49,832,492 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381349,653,078 - 49,679,016 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1349,653,078 - 49,679,016 (+)Ensemblmm10GRCm38
MGSCv371349,748,719 - 49,774,384 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361349,665,015 - 49,690,952 (+)NCBIMGSCv36mm8
Celera1350,744,124 - 50,769,671 (+)NCBICelera
Cytogenetic Map13A5NCBI
cM Map1325.36NCBI
Nol8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555155,449,578 - 5,475,147 (+)Ensembl
ChiLan1.0NW_0049555155,448,530 - 5,473,278 (+)NCBIChiLan1.0ChiLan1.0
NOL8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21147,104,299 - 47,132,302 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1947,106,688 - 47,134,814 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0963,419,188 - 63,447,316 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1991,492,883 - 91,521,466 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl991,493,241 - 91,519,621 (-)EnsemblpanPan2panpan1.1
NOL8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1199,019,646 - 99,043,446 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl199,020,291 - 99,043,442 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha199,413,847 - 99,437,242 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0199,636,986 - 99,660,398 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl199,636,861 - 99,660,396 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1199,249,965 - 99,273,351 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0198,985,152 - 99,008,544 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0199,741,939 - 99,765,327 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Nol8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049447,734,315 - 7,760,756 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364871,950,125 - 1,977,319 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364871,950,878 - 1,977,230 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NOL8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl342,026,278 - 42,052,773 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1342,026,233 - 42,053,049 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2343,227,450 - 43,244,300 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NOL8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.112102,823,206 - 102,851,484 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl12102,822,839 - 102,843,078 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366603891,095,495 - 91,123,768 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nol8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248684,031,837 - 4,057,376 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Nol8
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11468,624,693 - 68,649,225 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Nol8
204 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:363
Count of miRNA genes:193
Interacting mature miRNAs:217
Transcripts:ENSRNOT00000073035, ENSRNOT00000074667
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17143999106Rat
2300002Iddm36Insulin dependent diabetes mellitus QTL 361.98blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)17926675540968173Rat
2293664Bmd28Bone mineral density QTL 285.10.0001femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)17436005727233623Rat
8552966Pigfal18Plasma insulin-like growth factor 1 level QTL 188.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)171286094257860942Rat
1300123Bp194Blood pressure QTL 1942.82arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)17212084342054133Rat
1582224Epfw4Epididymal fat weight QTL 43.50.0058epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)17920650523859062Rat
1582225Bw67Body weight QTL 676.20.0001body mass (VT:0001259)body weight (CMO:0000012)17920650523859062Rat
2302377Scl61Serum cholesterol level QTL 614.36blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)17622199858177198Rat
1582226Bw64Body weight QTL 644.20.0017body mass (VT:0001259)body weight (CMO:0000012)17920650523859062Rat
9589151Insul30Insulin level QTL 308.820.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)171286094257860942Rat
10401807Kidm52Kidney mass QTL 52kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17131706603Rat
10054088Scort28Serum corticosterone level QTL 282.040.0102blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17473353449733534Rat
9589057Scfw6Subcutaneous fat weight QTL 68.620.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)171286094257860942Rat
1582208Kidm32Kidney mass QTL 323.90.0018kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17920650523859062Rat
9590154Scort9Serum corticosterone level QTL 923.570.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)171286094257860942Rat
9590088Insglur7Insulin/glucose ratio QTL 720.380.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)171286094257860942Rat
1549900Iddm20Insulin dependent diabetes mellitus QTL 203.7pancreas integrity trait (VT:0010560)percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)17122181410Rat
2317053Aia25Adjuvant induced arthritis QTL 252.69joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)171060469455604694Rat
1354613Kidm14Kidney mass QTL 146.2kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)17136045694Rat
7411666Foco31Food consumption QTL 3111.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)171286094257860942Rat
2324619Coatc4Coat color QTL 40.001coat/hair pigmentation trait (VT:0010463)pigmented dorsal coat/hair area to total dorsal coat/hair area ratio (CMO:0001811)17121499218Rat
2303627Vencon8Ventilatory control QTL 80.001respiration trait (VT:0001943)tidal volume (CMO:0000222)17473353449733534Rat
1581553Pur14Proteinuria QTL 145.30.0001urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)17798524316523460Rat
70184BpQTLcluster14Blood pressure QTL cluster 143.38arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)17857434232199534Rat
1582258Bw76Body weight QTL 764.60.0005body mass (VT:0001259)body weight (CMO:0000012)17920650523859062Rat
631207Niddm41Non-insulin dependent diabetes mellitus QTL 41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)17138037084Rat
1582199Insul5Insulin level QTL 53.40.0119blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)17920650523859062Rat
1354662Rf49Renal function QTL 492.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)17143999106Rat
2293648Bmd31Bone mineral density QTL 314.50.0001femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)17436005727233623Rat
1354658Spl8Serum phospholipid level QTL 83.8blood VLDL phospholipid amount (VT:0010507)blood very low density lipoprotein phospholipid level (CMO:0001571)17143999106Rat
1641902Colcr7Colorectal carcinoma resistance QTL 73.350.0044intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)17212084322087569Rat
1582241Bw70Body weight QTL 704.60.0003body mass (VT:0001259)body weight (CMO:0000012)17920650523859062Rat
1582245Bw73Body weight QTL 734.60.0004body mass (VT:0001259)body weight (CMO:0000012)17920650523859062Rat
9590316Scort21Serum corticosterone level QTL 214.750.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17122877318Rat

Markers in Region
RH141803  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21714,990,604 - 14,990,815 (+)MAPPERmRatBN7.2
Rnor_6.01715,406,019 - 15,406,229NCBIRnor6.0
Rnor_6.01714,565,982 - 14,566,192NCBIRnor6.0
Rnor_5.01717,464,469 - 17,464,679UniSTSRnor5.0
Rnor_5.01716,618,303 - 16,618,513UniSTSRnor5.0
RGSC_v3.41720,945,568 - 20,945,778UniSTSRGSC3.4
Celera1714,722,192 - 14,722,402UniSTS
RH 3.4 Map17157.3UniSTS
Cytogenetic Map17p14UniSTS
UniSTS:479010  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21715,006,140 - 15,006,791 (+)MAPPERmRatBN7.2
Rnor_6.01715,421,555 - 15,422,205NCBIRnor6.0
Rnor_6.01714,581,518 - 14,582,168NCBIRnor6.0
Rnor_5.01716,633,839 - 16,634,489UniSTSRnor5.0
Rnor_5.01717,480,005 - 17,480,655UniSTSRnor5.0
RGSC_v3.41720,961,104 - 20,961,754UniSTSRGSC3.4
Celera1714,737,728 - 14,738,378UniSTS
Cytogenetic Map17p14UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
25 14 74 238 147 142 83 117 83 12 479 243 11 197 117 149 59 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000073035   ⟹   ENSRNOP00000067842
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1715,196,881 - 15,220,202 (-)Ensembl
mRatBN7.2 Ensembl1714,990,417 - 15,013,848 (-)Ensembl
Rnor_6.0 Ensembl1714,565,794 - 14,589,154 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000074667   ⟹   ENSRNOP00000067547
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1715,405,995 - 15,429,051 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000093381   ⟹   ENSRNOP00000076111
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1715,199,025 - 15,219,495 (-)Ensembl
mRatBN7.2 Ensembl1714,992,590 - 15,013,848 (-)Ensembl
Rnor_6.0 Ensembl1715,405,860 - 15,429,322 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000093395
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1715,415,593 - 15,416,281 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000093737
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1715,417,965 - 15,420,578 (-)Ensembl
RefSeq Acc Id: NM_001395573   ⟹   NP_001382502
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81715,196,881 - 15,220,202 (-)NCBI
mRatBN7.21714,990,446 - 15,013,768 (-)NCBI
RefSeq Acc Id: NM_001395574   ⟹   NP_001382503
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81715,196,881 - 15,220,202 (-)NCBI
mRatBN7.21714,990,446 - 15,013,768 (-)NCBI
RefSeq Acc Id: XM_063276566   ⟹   XP_063132636
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81715,196,883 - 15,220,265 (-)NCBI
RefSeq Acc Id: XM_063276567   ⟹   XP_063132637
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81715,196,883 - 15,220,265 (-)NCBI
RefSeq Acc Id: XM_063276568   ⟹   XP_063132638
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81715,196,883 - 15,220,194 (-)NCBI
Ensembl Acc Id: ENSRNOP00000067842   ⟸   ENSRNOT00000073035
Ensembl Acc Id: ENSRNOP00000076111   ⟸   ENSRNOT00000093381
Ensembl Acc Id: ENSRNOP00000067547   ⟸   ENSRNOT00000074667
RefSeq Acc Id: NP_001382503   ⟸   NM_001395574
- Peptide Label: isoform 2
- UniProtKB: M0RDX9 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001382502   ⟸   NM_001395573
- Peptide Label: isoform 1
- UniProtKB: A6J6V5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063132637   ⟸   XM_063276567
- Peptide Label: isoform X2
- UniProtKB: A6J6V5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063132636   ⟸   XM_063276566
- Peptide Label: isoform X1
- UniProtKB: A6J6V5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063132638   ⟸   XM_063276568
- Peptide Label: isoform X3
- UniProtKB: A6J6V5 (UniProtKB/TrEMBL)
Protein Domains
RRM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A1W2Q629-F1-model_v2 AlphaFold A0A1W2Q629 1-1158 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309551 AgrOrtholog
BioCyc Gene G2FUF-10005 BioCyc
Ensembl Genes ENSRNOG00000045569 Ensembl
  ENSRNOG00000046968 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000073035 ENTREZGENE
  ENSRNOT00000073035.3 UniProtKB/TrEMBL
  ENSRNOT00000093381.3 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.330 UniProtKB/TrEMBL
InterPro NOP8_RRM UniProtKB/TrEMBL
  Nucleotide-bd_a/b_plait_sf UniProtKB/TrEMBL
  RBD_domain_sf UniProtKB/TrEMBL
  RRM_dom UniProtKB/TrEMBL
NCBI Gene 361221 ENTREZGENE
PANTHER NUCLEOLAR PROTEIN 8 UniProtKB/TrEMBL
  NUCLEOLAR PROTEIN 8 UniProtKB/TrEMBL
Pfam RRM_1 UniProtKB/TrEMBL
PhenoGen Nol8 PhenoGen
PROSITE RRM UniProtKB/TrEMBL
RatGTEx ENSRNOG00000045569 RatGTEx
  ENSRNOG00000046968 RatGTEx
SMART RRM UniProtKB/TrEMBL
Superfamily-SCOP SSF54928 UniProtKB/TrEMBL
UniProt A0A1W2Q629_RAT UniProtKB/TrEMBL
  A6J6V5 ENTREZGENE, UniProtKB/TrEMBL
  M0RDX9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Nol8  nucleolar protein 8  NEWGENE_1309551  nucleolar protein 8  Data merged from RGD:11418826 737654 PROVISIONAL
2016-08-02 NEWGENE_1309551  nucleolar protein 8      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-04-30 Nol8  nucleolar protein 8   Nol8_predicted  nucleolar protein 8 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Nol8_predicted  nucleolar protein 8 (predicted)      Symbol and Name status set to approved 70820 APPROVED