Bkgd (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 8 | 20,405,240 - 20,427,811 (-) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 8 | 20,405,241 - 20,427,811 (-) | Ensembl | | | | GRCr8 | mRatBN7.2 | 8 | 12,123,839 - 12,146,412 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 12,123,823 - 12,146,473 (-) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 8 | 16,105,416 - 16,128,149 (-) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 8 | 14,403,166 - 14,425,899 (-) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 8 | 12,386,795 - 12,409,368 (-) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 8 | 13,838,549 - 13,861,120 (-) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 13,838,572 - 13,861,212 (-) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 13,778,079 - 13,800,657 (-) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 8 | 12,084,956 - 12,106,942 (-) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 8 | 13,591,560 - 13,614,122 (-) | NCBI | | Celera | | | RGSC_v3.1 | 8 | 12,084,956 - 12,106,942 (-) | NCBI | | | | | Cytogenetic Map | 8 | q12 | NCBI | | | | |
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BKGD (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 11 | 93,741,672 - 93,764,749 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 93,741,570 - 93,767,202 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 11 | 93,474,838 - 93,497,915 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 93,114,441 - 93,135,895 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Celera | 11 | 90,766,246 - 90,787,706 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | q21 | NCBI | | | | | HuRef | 11 | 89,552,027 - 89,573,474 (+) | NCBI | | HuRef | | | CHM1_1 | 11 | 93,357,812 - 93,379,251 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 93,658,054 - 93,681,124 (+) | NCBI | | T2T-CHM13v2.0 | | |
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4931406C07Rik (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 9 | 15,194,633 - 15,217,836 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 15,194,633 - 15,217,744 (-) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 9 | 15,283,337 - 15,306,448 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 15,283,337 - 15,306,448 (-) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 9 | 15,087,783 - 15,106,000 (-) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 15,033,732 - 15,051,949 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 12,562,605 - 12,580,874 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | A2 | NCBI | | | | | cM Map | 9 | 4.76 | NCBI | | | | |
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Bkgd (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955414 | 780,167 - 789,294 (-) | Ensembl | | | | | ChiLan1.0 | NW_004955414 | 780,009 - 809,016 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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BKGD (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 9 | 94,601,352 - 94,623,197 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 95,695,275 - 95,717,119 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 88,763,232 - 88,785,075 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 92,250,482 - 92,272,026 (+) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 92,250,482 - 92,272,026 (+) | Ensembl | | | panPan2 | panpan1.1 |
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C21H11orf54 (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 21 | 6,993,272 - 7,013,053 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 21 | 6,993,856 - 7,009,268 (-) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 21 | 7,008,685 - 7,028,015 (-) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 21 | 7,173,928 - 7,193,277 (-) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 21 | 7,173,933 - 7,193,558 (-) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 21 | 6,960,106 - 6,979,446 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 21 | 7,024,513 - 7,043,848 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 21 | 7,073,365 - 7,092,705 (-) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Bkgd (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024404947 | 78,846,944 - 78,862,659 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936674 | 1,026,714 - 1,043,103 (-) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936674 | 1,028,866 - 1,044,421 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
C9H11orf54 (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 9 | 26,170,413 - 26,187,619 (+) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 9 | 26,167,341 - 26,187,627 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 9 | 29,769,206 - 29,821,157 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
BKGD (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 1 | 84,993,668 - 85,014,743 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 84,999,541 - 85,013,322 (+) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666043 | 40,786,224 - 40,807,523 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Bkgd (Heterocephalus glaber - naked mole-rat) |
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Bkgd (Rattus rattus - black rat) |
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