Klhl20 (kelch-like family member 20) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Klhl20 (kelch-like family member 20) Rattus norvegicus
Analyze
Symbol: Klhl20
Name: kelch-like family member 20
RGD ID: 1309490
Description: Predicted to enable type II interferon binding activity and ubiquitin-like ligase-substrate adaptor activity. Predicted to contribute to ubiquitin-protein transferase activity. Predicted to be involved in several processes, including Golgi to endosome transport; proteasome-mediated ubiquitin-dependent protein catabolic process; and protein K33-linked ubiquitination. Predicted to be located in several cellular components, including Golgi apparatus; dendrite; and perinuclear region of cytoplasm. Predicted to be part of Cul3-RING ubiquitin ligase complex. Predicted to be active in PML body and trans-Golgi network. Orthologous to human KLHL20 (kelch like family member 20); PARTICIPATES IN E-cadherin signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; cadmium dichloride.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: kelch-like 20; kelch-like 20 (Drosophila); kelch-like protein 20; LOC304920; RGD1309490; similar to Kelch-like protein X
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81375,896,802 - 75,941,724 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1375,898,410 - 75,945,061 (-)EnsemblGRCr8
mRatBN7.21373,363,451 - 73,408,293 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1373,363,455 - 73,408,337 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1375,957,572 - 76,000,750 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01377,241,750 - 77,284,981 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01374,501,649 - 74,544,879 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01378,912,361 - 78,957,226 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1378,912,361 - 78,957,212 (-)Ensemblrn6Rnor6.0
Rnor_5.01383,806,856 - 83,851,835 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41376,655,800 - 76,700,630 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1373,151,653 - 73,196,612 (-)NCBICelera
RGSC_v3.11376,669,986 - 76,714,795 (-)NCBI
Cytogenetic Map13q22NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
axon  (IEA)
Cul3-RING ubiquitin ligase complex  (IBA,IEA,ISO,ISS)
cytoplasm  (IBA,IEA,ISO,ISS)
cytosol  (IEA,ISO)
dendrite  (IEA)
Golgi apparatus  (IEA,ISO)
nucleus  (IEA)
perinuclear region of cytoplasm  (IEA)
PML body  (IBA,IEA,ISO,ISS)
trans-Golgi network  (IBA,IEA,ISO,ISS)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
4. GOA pipeline RGD automated data pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:20389280   PMID:24768539  


Genomics

Comparative Map Data
Klhl20
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81375,896,802 - 75,941,724 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1375,898,410 - 75,945,061 (-)EnsemblGRCr8
mRatBN7.21373,363,451 - 73,408,293 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1373,363,455 - 73,408,337 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1375,957,572 - 76,000,750 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01377,241,750 - 77,284,981 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01374,501,649 - 74,544,879 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01378,912,361 - 78,957,226 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1378,912,361 - 78,957,212 (-)Ensemblrn6Rnor6.0
Rnor_5.01383,806,856 - 83,851,835 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41376,655,800 - 76,700,630 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1373,151,653 - 73,196,612 (-)NCBICelera
RGSC_v3.11376,669,986 - 76,714,795 (-)NCBI
Cytogenetic Map13q22NCBI
KLHL20
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381173,714,981 - 173,786,692 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1173,714,919 - 173,786,820 (+)Ensemblhg38GRCh38
GRCh371173,684,120 - 173,755,830 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361171,950,703 - 172,022,463 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341170,415,736 - 170,487,495NCBI
Celera1146,793,483 - 146,865,313 (+)NCBICelera
Cytogenetic Map1q25.1NCBI
HuRef1144,908,412 - 144,980,589 (+)NCBIHuRef
CHM1_11175,106,512 - 175,178,272 (+)NCBICHM1_1
T2T-CHM13v2.01173,064,952 - 173,144,852 (+)NCBIT2T-CHM13v2.0
Klhl20
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391160,915,945 - 160,959,078 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1160,915,945 - 160,959,081 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381161,088,375 - 161,131,508 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1161,088,375 - 161,131,511 (-)Ensemblmm10GRCm38
MGSCv371163,018,509 - 163,061,610 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361162,925,055 - 162,968,156 (-)NCBIMGSCv36mm8
Celera1163,529,622 - 163,575,184 (-)NCBICelera
Cytogenetic Map1H2.1NCBI
cM Map169.75NCBI
Klhl20
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540613,891,571 - 13,938,964 (+)Ensembl
ChiLan1.0NW_00495540613,891,589 - 13,938,964 (+)NCBIChiLan1.0ChiLan1.0
KLHL20
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2175,933,888 - 76,010,859 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1175,607,955 - 75,684,925 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01149,232,858 - 149,303,357 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11152,937,823 - 153,008,239 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1152,937,835 - 153,008,239 (+)EnsemblpanPan2panpan1.1
KLHL20
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1725,430,490 - 25,484,245 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl725,430,745 - 25,484,311 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha724,963,208 - 25,016,807 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0725,181,335 - 25,235,514 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl725,181,410 - 25,235,592 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1725,100,724 - 25,154,322 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0725,182,954 - 25,236,787 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0725,327,998 - 25,381,599 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Klhl20
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934496,227,044 - 96,264,900 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648114,071,470 - 14,111,838 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493648114,074,169 - 14,111,634 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KLHL20
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9116,005,574 - 116,083,452 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.19116,005,562 - 116,083,478 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29127,640,396 - 127,718,048 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KLHL20
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12555,407,648 - 55,473,195 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2555,405,713 - 55,473,175 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605556,970,008 - 57,035,548 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Klhl20
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247718,068,522 - 8,117,329 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Klhl20
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11040,384,454 - 40,428,780 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Klhl20
311 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:136
Count of miRNA genes:101
Interacting mature miRNAs:116
Transcripts:ENSRNOT00000003851
Prediction methods:Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134863963493639634Rat
10755495Bp387Blood pressure QTL 3873.78arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133721624190057603Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1338975045103588154Rat
8655951Rf63Renal function QTL 6312.2blood urea nitrogen amount (VT:0005265)plasma urea nitrogen level (CMO:0000586)1371610804109350286Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133992469384924693Rat
8655945Rf61Renal function QTL 613.6blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)137161080489333251Rat
71119Thym2Thymus enlargement QTL 23.8thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)134874981487285480Rat
4889861Pur29Proteinuria QTL 2913.80.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)133996821183286298Rat
1331783Bp221Blood pressure QTL 2213.72886arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)137161080489333251Rat
8655959Pur32Proteinuria QTL 328.4urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)137298450699745408Rat
2293687Bss26Bone structure and strength QTL 264.60.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1367635937109350286Rat
1300166Kidm6Kidney mass QTL 63.93kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)137161080489333251Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13742179187286911Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133708798382087983Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13600200888706694Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)134098358585983585Rat
724564Uae11Urinary albumin excretion QTL 115.7urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)134735425894285672Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1321120177109350286Rat
738027Lnnr6Liver neoplastic nodule remodeling QTL 63.3liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)1365613454109350286Rat
7387280Uae43Urinary albumin excretion QTL 435.690.4174urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1368983334109350286Rat
738026Lnnr5Liver neoplastic nodule remodeling QTL 53.29liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)136242459288113509Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133379409678794096Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1367635937109350286Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133992469384924693Rat
1576318Schws5Schwannoma susceptibility QTL 50.0351nervous system integrity trait (VT:0010566)post-insult time to trigeminal nerve neurilemmoma formation (CMO:0002019)1364497900109350286Rat
2303563Bw89Body weight QTL 896body mass (VT:0001259)body weight (CMO:0000012)133483494779834947Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1311081740103588154Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13600200888706694Rat
12879477Bp401Blood pressure QTL 401arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133981472684814726Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133996821184968211Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1364375743109350286Rat
11530006Niddm72Non-insulin dependent diabetes mellitus QTL 720.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)133828629883286298Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131103588154Rat
2293341Glom15Glomerulus QTL 159.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1367635937109350286Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000003851   ⟹   ENSRNOP00000003851
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1375,898,410 - 75,941,686 (-)Ensembl
mRatBN7.2 Ensembl1373,363,455 - 73,408,319 (-)Ensembl
Rnor_6.0 Ensembl1378,912,365 - 78,957,212 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000076070
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1378,921,202 - 78,929,624 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000076907
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1378,933,856 - 78,957,189 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000076954   ⟹   ENSRNOP00000068007
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1375,898,410 - 75,945,061 (-)Ensembl
mRatBN7.2 Ensembl1373,363,467 - 73,408,337 (-)Ensembl
Rnor_6.0 Ensembl1378,912,361 - 78,957,183 (-)Ensembl
RefSeq Acc Id: NM_001107192   ⟹   NP_001100662
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81375,898,404 - 75,941,640 (-)NCBI
mRatBN7.21373,365,053 - 73,408,290 (-)NCBI
Rnor_6.01378,912,365 - 78,957,212 (-)NCBI
Rnor_5.01383,806,856 - 83,851,835 (-)NCBI
RGSC_v3.41376,655,800 - 76,700,630 (-)RGD
Celera1373,151,653 - 73,196,612 (-)RGD
Sequence:
RefSeq Acc Id: XM_008769649   ⟹   XP_008767871
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81375,896,802 - 75,941,724 (-)NCBI
mRatBN7.21373,363,451 - 73,408,293 (-)NCBI
Rnor_6.01378,912,361 - 78,957,226 (-)NCBI
Sequence:
RefSeq Acc Id: XR_595500
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81375,896,802 - 75,941,643 (-)NCBI
mRatBN7.21373,363,467 - 73,408,293 (-)NCBI
Rnor_6.01378,912,369 - 78,957,226 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001100662 (Get FASTA)   NCBI Sequence Viewer  
  XP_008767871 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein D3Z8N4 (Get FASTA)   NCBI Sequence Viewer  
  EDM09421 (Get FASTA)   NCBI Sequence Viewer  
  EDM09422 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000003851
  ENSRNOP00000003851.5
  ENSRNOP00000068007
RefSeq Acc Id: NP_001100662   ⟸   NM_001107192
- UniProtKB: D3Z8N4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_008767871   ⟸   XM_008769649
- Peptide Label: isoform X1
- UniProtKB: A0A8L2QYR5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000003851   ⟸   ENSRNOT00000003851
Ensembl Acc Id: ENSRNOP00000068007   ⟸   ENSRNOT00000076954
Protein Domains
BACK   BTB

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3Z8N4-F1-model_v2 AlphaFold D3Z8N4 1-609 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698934
Promoter ID:EPDNEW_R9456
Type:multiple initiation site
Name:Klhl20_1
Description:kelch-like family member 20
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01378,957,189 - 78,957,249EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309490 AgrOrtholog
BioCyc Gene G2FUF-17728 BioCyc
Ensembl Genes ENSRNOG00000002875 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000003851 ENTREZGENE
  ENSRNOT00000003851.6 UniProtKB/Swiss-Prot
  ENSRNOT00000076954 ENTREZGENE
Gene3D-CATH 1.25.40.420 UniProtKB/Swiss-Prot
  2.120.10.80 UniProtKB/Swiss-Prot
  Potassium Channel Kv1.1, Chain A UniProtKB/Swiss-Prot
InterPro BACK UniProtKB/Swiss-Prot
  BTB-kelch_protein UniProtKB/Swiss-Prot
  BTB/POZ_dom UniProtKB/Swiss-Prot
  Kelch-typ_b-propeller UniProtKB/Swiss-Prot
  Kelch_1 UniProtKB/Swiss-Prot
  SKP1/BTB/POZ_sf UniProtKB/Swiss-Prot
KEGG Report rno:304920 UniProtKB/Swiss-Prot
NCBI Gene 304920 ENTREZGENE
PANTHER KELCH PROTEIN UniProtKB/Swiss-Prot
  KELCH-LIKE PROTEIN 20 UniProtKB/Swiss-Prot
Pfam BACK UniProtKB/Swiss-Prot
  BTB UniProtKB/Swiss-Prot
  Kelch_1 UniProtKB/Swiss-Prot
  Kelch_KLHDC2_KLHL20_DRC7 UniProtKB/Swiss-Prot
PhenoGen Klhl20 PhenoGen
PIRSF Kelch-like_protein_gigaxonin UniProtKB/Swiss-Prot
PRINTS KELCHREPEAT UniProtKB/Swiss-Prot
PROSITE BTB UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000002875 RatGTEx
SMART BACK UniProtKB/Swiss-Prot
  BTB UniProtKB/Swiss-Prot
  Kelch UniProtKB/Swiss-Prot
Superfamily-SCOP SSF117281 UniProtKB/Swiss-Prot
  SSF54695 UniProtKB/Swiss-Prot
UniProt A0A8L2QYR5 ENTREZGENE, UniProtKB/TrEMBL
  D3Z8N4 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-02-06 Klhl20  kelch-like family member 20  Klhl20  kelch-like 20 (Drosophila)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Klhl20  kelch-like 20 (Drosophila)   Klhl20_predicted  kelch-like 20 (Drosophila) (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Klhl20_predicted  kelch-like 20 (Drosophila) (predicted)  RGD1309490_predicted  similar to Kelch-like protein X (predicted)  Symbol and Name updated 1299863 APPROVED
2005-01-20 RGD1309490_predicted  similar to Kelch-like protein X (predicted)  LOC304920_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC304920_predicted  similar to Kelch-like protein X (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL