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Gene: Ankrd46 (ankyrin repeat domain 46) Rattus norvegicus

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Symbol:

Ankrd46

Name:

ankyrin repeat domain 46

RGD ID:

1309382

Description:

Predicted to be located in membrane. Orthologous to human ANKRD46 (ankyrin repeat domain 46); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; acetamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

ank-s; ankyrin repeat domain-containing protein 46; ankyrin repeat small protein; LOC299982; MGC124899; RGD1309382; similar to RIKEN cDNA C730048E16

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ANKRD46 (ankyrin repeat domain 46)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Ankrd46 (ankyrin repeat domain 46)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ankrd46 (ankyrin repeat domain 46)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ANKRD46 (ankyrin repeat domain 46)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ANKRD46 (ankyrin repeat domain 46)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ankrd46 (ankyrin repeat domain 46)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ANKRD46 (ankyrin repeat domain 46)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ANKRD46 (ankyrin repeat domain 46)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ankrd46 (ankyrin repeat domain 46)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Ankrd46 (ankyrin repeat domain 46)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	KIF20B (kinesin family member 20B)	HGNC	OMA
Alliance orthologs ³
Mus musculus (house mouse):	Ankrd46 (ankyrin repeat domain 46)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	ANKRD46 (ankyrin repeat domain 46)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ankrd46a (ankyrin repeat domain 46a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	ankrd46a (ankyrin repeat domain 46a)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PhylomeDB)
Danio rerio (zebrafish):	ankrd46b (ankyrin repeat domain 46b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	ankrd46b (ankyrin repeat domain 46b)	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ankrd46	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ankrd46	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	69,532,303 - 69,553,311 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	69,532,304 - 69,545,421 (-)	Ensembl				GRCr8
mRatBN7.2	7	67,647,202 - 67,668,180 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	67,647,204 - 67,668,132 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	69,535,611 - 69,556,581 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	71,738,219 - 71,759,188 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	71,606,089 - 71,627,059 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	75,279,443 - 75,300,442 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	75,279,446 - 75,288,365 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	75,427,579 - 75,448,564 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	71,986,088 - 72,007,057 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	64,727,370 - 64,748,339 (-)	NCBI		Celera
RGSC_v3.1	7	72,006,817 - 72,027,776 (-)	NCBI
Cytogenetic Map	7	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-hydroxypropanoic acid (ISO)

2-methylcholine (ISO)

4,4'-sulfonyldiphenol (ISO)

acetamide (EXP)

all-trans-retinoic acid (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

Aroclor 1254 (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (EXP,ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP)

bisphenol F (ISO)

buspirone (EXP)

Butylbenzyl phthalate (ISO)

cadmium sulfate (ISO)

clobetasol (ISO)

clofibrate (ISO)

copper(II) sulfate (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

dibutyl phthalate (EXP,ISO)

dicrotophos (ISO)

diethyl maleate (EXP)

disodium selenite (ISO)

epoxiconazole (ISO)

ethanol (ISO)

folic acid (ISO)

formaldehyde (ISO)

glafenine (EXP)

lead(0) (ISO)

methyl methanesulfonate (ISO)

nitrates (ISO)

okadaic acid (ISO)

paracetamol (ISO)

perfluorohexanesulfonic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

tamoxifen (ISO)

tetrachloromethane (EXP,ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

trichloroethene (ISO)

trichostatin A (ISO)

triphenyl phosphate (EXP,ISO)

urethane (ISO)

valproic acid (ISO)

vinclozolin (EXP)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

membrane (IEA)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:22871113

Genomics

Comparative Map Data

Ankrd46
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	69,532,303 - 69,553,311 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	69,532,304 - 69,545,421 (-)	Ensembl				GRCr8
mRatBN7.2	7	67,647,202 - 67,668,180 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	67,647,204 - 67,668,132 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	69,535,611 - 69,556,581 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	71,738,219 - 71,759,188 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	71,606,089 - 71,627,059 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	75,279,443 - 75,300,442 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	75,279,446 - 75,288,365 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	75,427,579 - 75,448,564 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	71,986,088 - 72,007,057 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	64,727,370 - 64,748,339 (-)	NCBI		Celera
RGSC_v3.1	7	72,006,817 - 72,027,776 (-)	NCBI
Cytogenetic Map	7	q22	NCBI

ANKRD46
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	100,509,752 - 100,559,759 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	100,509,752 - 100,559,784 (-)	Ensembl			hg38	GRCh38
GRCh37	8	101,521,980 - 101,571,987 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	101,602,176 - 101,641,188 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	8	97,718,378 - 97,757,379 (-)	NCBI		Celera
Cytogenetic Map	8	q22.3	NCBI
HuRef	8	96,721,557 - 96,771,579 (-)	NCBI		HuRef
CHM1_1	8	101,562,856 - 101,612,900 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	8	101,635,790 - 101,685,789 (-)	NCBI		T2T-CHM13v2.0

Ankrd46
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	36,477,814 - 36,496,937 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	36,477,814 - 36,496,966 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	15	36,477,668 - 36,496,791 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	36,477,668 - 36,496,820 (-)	Ensembl			mm10	GRCm38
MGSCv37	15	36,407,423 - 36,426,546 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	15	36,422,257 - 36,441,340 (-)	NCBI		MGSCv36	mm8
Celera	15	37,105,451 - 37,124,628 (-)	NCBI		Celera
Cytogenetic Map	15	B3.1	NCBI
cM Map	15	14.47	NCBI

Ankrd46
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955417	15,737,658 - 15,750,627 (-)	Ensembl
ChiLan1.0	NW_004955417	15,740,108 - 15,750,627 (-)	NCBI	ChiLan1.0	ChiLan1.0

ANKRD46
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	117,858,556 - 117,910,616 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	93,397,355 - 93,449,431 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	97,151,126 - 97,203,196 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	99,322,923 - 99,376,251 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	99,322,930 - 99,376,251 (-)	Ensembl			panPan2	panpan1.1

ANKRD46
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	2,384,007 - 2,415,187 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	2,385,611 - 2,498,364 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	2,381,125 - 2,412,315 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	2,537,108 - 2,568,299 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	2,537,109 - 2,651,455 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	2,381,669 - 2,412,884 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	2,493,322 - 2,524,543 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	2,510,688 - 2,541,879 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Ankrd46
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	35,329,657 - 35,356,371 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936470	42,755,751 - 42,782,670 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936470	42,755,799 - 42,782,479 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ANKRD46
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	36,400,660 - 36,444,335 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	4	36,400,610 - 36,445,590 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	39,323,164 - 39,368,112 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ANKRD46
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	95,369,941 - 95,412,737 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	95,369,901 - 95,412,688 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666039	45,273,760 - 45,316,265 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ankrd46
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624763	7,416,669 - 7,445,411 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624763	7,416,669 - 7,445,418 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Ankrd46
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	209,996,961 - 210,015,985 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Ankrd46
234 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	485
Count of miRNA genes:	254
Interacting mature miRNAs:	324
Transcripts:	ENSRNOT00000036904
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10053722	Scort27	Serum corticosterone level QTL 27	2.41	0.0083	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	7	45113903	90113903	Rat
1549840	Bss5	Bone structure and strength QTL 5	9.8		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	7	26638057	71638057	Rat
1357336	Gluco6	Glucose level QTL 6	3.4		blood glucose amount (VT:0000188)	serum glucose level (CMO:0000543)	7	51700643	96700643	Rat
1300127	Srn1	Serum renin concentration QTL 1	3.87		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	7	24179478	86817926	Rat
1358361	Sradr5	Stress Responsive Adrenal Weight QTL 5	5.55		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	7	31770293	110435881	Rat
1298525	Cm1	Cardiac mass QTL 1	2.7		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	7	56625161	101625161	Rat
631513	Scl7	Serum cholesterol level QTL 7	4.1		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	7	39845902	84845902	Rat
631504	Cm27	Cardiac mass QTL 27	3.45		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	7	46307490	127866166	Rat
10755453	Coatc12	Coat color QTL 12		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	32998702	77998702	Rat
1559283	Emca4	Estrogen-induced mammary cancer QTL 4	3.7		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	7	63889858	108889858	Rat
1300151	Bp181	Blood pressure QTL 181	3.36		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	7	55498584	105834451	Rat
7411605	Foco14	Food consumption QTL 14	24.1	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	36178764	81178764	Rat
738030	Anxrr8	Anxiety related response QTL 8	4.1		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	48475049	93475049	Rat
1643004	Pain2	Pain QTL 2	1		mechanical nociception trait (VT:0002734)	self mutilation severity score (CMO:0002145)	7	10112916	99900612	Rat
1300149	Cm6	Cardiac mass QTL 6	4.09		heart mass (VT:0007028)	heart left ventricle weight to body weight ratio (CMO:0000530)	7	1	104117804	Rat
631534	Lnnr1	Liver neoplastic nodule remodeling QTL 1	3.85	0.001	liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)	7	36178764	81178764	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	1509236	116977875	Rat
61357	Bp38	Blood pressure QTL 38	1.6	0.052	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	40540077	123682549	Rat
2316947	Rf58	Renal function QTL 58	7.8		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	7	49682832	115766396	Rat
1298528	Bp169	Blood pressure QTL 169		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	62963207	107963207	Rat
1576303	Ept7	Estrogen-induced pituitary tumorigenesis QTL 7	3.7		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	7	63889858	108889858	Rat
1300132	Bp182	Blood pressure QTL 182	3.49		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	7	21541977	86817926	Rat
2316955	Stl24	Serum triglyceride level QTL 24	7.1		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	7	49682832	115766396	Rat
2316952	Pur22	Proteinuria QTL 22	5.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	7	49682832	115766396	Rat
2303582	Gluco53	Glucose level QTL 53	3		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	7	48603087	93603087	Rat
61439	Cia8	Collagen induced arthritis QTL 8	5.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	7	27182914	72182914	Rat

Markers in Region

AW523799

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	67,648,323 - 67,648,479 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	75,280,565 - 75,280,720	NCBI	Rnor6.0
Rnor_5.0	7	75,428,701 - 75,428,856	UniSTS	Rnor5.0
RGSC_v3.4	7	71,987,205 - 71,987,360	UniSTS	RGSC3.4
Celera	7	64,728,487 - 64,728,642	UniSTS
Cytogenetic Map	7	q22	UniSTS

BI278372

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	67,648,609 - 67,648,817 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	75,280,851 - 75,281,058	NCBI	Rnor6.0
Rnor_5.0	7	75,428,987 - 75,429,194	UniSTS	Rnor5.0
RGSC_v3.4	7	71,987,491 - 71,987,698	UniSTS	RGSC3.4
Celera	7	64,728,773 - 64,728,980	UniSTS
RH 3.4 Map	7	640.3	UniSTS
Cytogenetic Map	7	q22	UniSTS

BE106747

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	67,667,701 - 67,667,863 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	75,299,939 - 75,300,100	NCBI	Rnor6.0
Rnor_5.0	7	75,448,075 - 75,448,236	UniSTS	Rnor5.0
RGSC_v3.4	7	72,006,579 - 72,006,740	UniSTS	RGSC3.4
Celera	7	64,747,861 - 64,748,022	UniSTS
RH 3.4 Map	7	640.69	UniSTS
Cytogenetic Map	7	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001013948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241531	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241532	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263262	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB095364	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC105616	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000036904 ⟹ ENSRNOP00000034048

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	69,532,304 - 69,545,421 (-)	Ensembl
mRatBN7.2 Ensembl	7	67,647,204 - 67,668,120 (-)	Ensembl
Rnor_6.0 Ensembl	7	75,279,446 - 75,288,365 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099363 ⟹ ENSRNOP00000076722

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	67,647,204 - 67,668,132 (-)	Ensembl

RefSeq Acc Id:

NM_001013948 ⟹ NP_001013970

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	69,532,308 - 69,553,277 (-)	NCBI
mRatBN7.2	7	67,647,207 - 67,668,180 (-)	NCBI
Rnor_6.0	7	75,279,448 - 75,300,417 (-)	NCBI
Rnor_5.0	7	75,427,579 - 75,448,564 (-)	NCBI
RGSC_v3.4	7	71,986,088 - 72,007,057 (-)	RGD
Celera	7	64,727,370 - 64,748,339 (-)	RGD

Sequence:

show sequence

TGTGGTCGTCGCGCCCCGCCCTCAGTCACTGGAGAGGAGGAGCTGCTGCCTTCATTGCTCCTTC
AGGATCAGATAAACTGAGGCACAGAGTCTAAATTAACCTGTCCAAGGCCAGACAGTTGGCAGAG
TAAGTGGAATCAGAGACACACAAGACTTCACGCCAGCACCCTTTACCTTCCAAAGGGGTGTCCG
TCCACCACAGACCATGTCCTACGTTTTTGTGAATGACTCTTCACAGACTAATGTGCCCTTGCTT
CAAGCTTGCATCGATGGGGACTTCACCTATTCTAAGAGGCTTCTGGAAAGTGGCTTTGACCCAA
ATATCCGAGACAGCAGAGGCAGAACAGGCCTGCACCTCGCCGCAGCCCGAGGGAACGTGGACAT
CTGCCAGCTGCTACATAAGTTTGGTGCTGATCCACTGGCCACGGATTATCAGGGGAACACAGCC
CTCCACCTGTGTGGCCATGTGGACACCATCCAGTTCTTAGTTTCCAACGGGCTCAAAATTGATA
TTTGCAATCATCAAGGTGCTACCCCTTTAGTTCTGGCAAAGCGCCGGGGTGTGAATAAAGATGT
CATCCGACTGCTGGAGTCTTTGGAAGAACAGGAAGTAAAAGGATTTAACAGAGGCACACACTCG
AAATTGGAGACCATGCAGACGGCGGAGAGCGAAAGTGCCATGGAAAGCCATTCACTGCTCAACC
CCAATCTCCAGCAAGGCGAAGGAGTCCTGTCCAGCTTCCGGACTACGTGGCAGGAATTTGTGGA
GGACCTGGGTTTCTGGAGGGTCTTGCTCTTGATCTTGGTCATTGCTTTGCTTTCTCTGGGCATT
GCCTACTACGTGAGTGGGGTGCTGCCCTTTGTGGATAACCAGCCTGGGCTGGTGCACTGAGGGC
TCTCGGACGTAAGGCAAGGGGCAGCTGGTGTGGCTTTTCAGTTCTTAGACCATTTGTTAGCACA
AGGCAGTGAGGCCTGTCCGTGTTTAGGACTTTTATTTACTGTGACGCTTACAGAAGAATGATGT
CCCCTCTGAACTTCACCCTGTAGTTGGCTATACTGCGTCCTGATGCCACCCTCTGACGCAGCCG
GGTCCAAGGAAGAATTCTCCAGGCTTGTGTGACCCAAGTGTGGTGGACACTGAAGGTAGAGGCT
TGGGAGGCCTCAGAGCGGGGCCTGACCTTGATGGAGGAGCAGTGGCCATCTAGGATTCCATTCG
CTAGTGGCTTTGTTTTTTTGTTGTTTTTTTTTTTTTTAATTTACTTTCCTGGCAAGAGGAGGGA
GAGAAAACTTTCAACTTAAATTTTAATTTCTTTTACAATCTGTATGACAAATTAGAACTGTTAG
AAACTTTGACTTTAAAAGTTCAGGTTACTCAGACAGTAGACAGGTTTAGGAAGTTTTTTCGTTA
GCATGGATTGACTTGATCAATGTTTAGCGCCATGGAGCGATTTTGATTCATTCTAAACTGATTG
CAGTGTCTGAGAATCAACTCTTTGAGGAGTTCAGCTCACTCTTCAGTCCCTCCCATTGTTACTT
TTGAGATGTCCCATTCAGAAAAACACCAGGAAACCCTTTGTAGTGAATAGTTGTTAGAGAAAGA
GTGCTCTCCTTCATTATCACCAAACTCGGGAGTGCCGACAAGCCAGCTGTGTCATGGGCACACC
ACAGTTAACCCTGGGTCTGAACCCGTCTAAGTCAGCAGGAGCCCAGCCGTTGGGGTAGGGGGTG
TATTTCTGAGTAAAGAGCCCTGAACAGTACCGTGCTGCTGCTACGGTGTCTTCCCGTGTCCAGG
TGCATTATATGAATAGAACGCAGCTTCCCTGCAGTGTCTGAAAGCCCTCTTTGGTCCTGTGGTA
TAGAAATCACGTAATTTTTGTTTGTGTTTGTTTTTATATTACAGAGCATGGAGGCTTAATAATT
GAGTAAAATCTGAAACTTGCAGTGAAGAGCTAACAGTTCTCTTTTCTATAGCAAAGGTACCCCT
AGCTGACTGTCCTTCTACAAGCCTCTCGCTCACTGACATTTTCTCCTCTGCTTCCAGATACCCA
GTACTGACACTCTTTTCTTTCATGCGGCTTTACCCTGTCTGAAGGAACTGTTTACAGCTCCTTA
CTGGCTGCTTCAGAATCCGCCTGCAGTGTCTTGCTTTTAACTAATCATGTTTGGTGAATGCAAG
GGGGAAACAGTCTTTTGCTTTTGCACGGAGAACACTAGAATTCAAGTTCAAAGTGTGTTCAGAA
TGAGTGCTGTGGAATTCGCTTCCCCTCTGTAAATCAGACTGTGTGATGTAATACTCTGCCTCTA
AGATCCTTGCTTCCTGCCCAGCCCTGGTTTCTGTGCATCATGTGCTCAACATTGTTCATTTAAC
TGCTTCCAATAAATGCATTTATAAATCCTA

hide sequence

RefSeq Acc Id:

XM_006241530 ⟹ XP_006241592

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	69,532,303 - 69,553,224 (-)	NCBI
mRatBN7.2	7	67,647,202 - 67,668,081 (-)	NCBI
Rnor_6.0	7	75,279,443 - 75,300,338 (-)	NCBI
Rnor_5.0	7	75,427,579 - 75,448,564 (-)	NCBI

Sequence:

show sequence

GGGCCGGGGCTGTGGGCAGCAGCTGGACTGGAGCGAGTGACACCTGCCCTAAGGGCCGTGGAGC
CCGGTGCGGGTCCGAGCGGCTTAGCCGCGGGCGATGATGGCGGGAGGGCCTAGGTCAGGCCTGG
GAGATTGCACGGAGGATGCCCACGGATATTTCGGAGTCTCCTGGCAGCCCACGCCCCAGCCCTA
TGGCGACGTCCTTCCCAGGCCGGGATGCAGAGCATAGTTAGGAATTGTCATGTCCTTAGCTGGT
CACGAGGAGTCCGCAGCCCTGGCGAGCGTGGGCACTGTGGAGGTCCGTGTGATCTGCCCAGACT
GTCACACTGCCCAGGGCATTCTCGATAAACTGAGGCACAGAGTCTAAATTAACCTGTCCAAGGC
CAGACAGTTGGCAGAGTAAGTGGAATCAGAGACACACAAGACTTCACGCCAGCACCCTTTACCT
TCCAAAGGGGTGTCCGTCCACCACAGACCATGTCCTACGTTTTTGTGAATGACTCTTCACAGAC
TAATGTGCCCTTGCTTCAAGCTTGCATCGATGGGGACTTCACCTATTCTAAGAGGCTTCTGGAA
AGTGGCTTTGACCCAAATATCCGAGACAGCAGAGGCAGAACAGGCCTGCACCTCGCCGCAGCCC
GAGGGAACGTGGACATCTGCCAGCTGCTACATAAGTTTGGTGCTGATCCACTGGCCACGGATTA
TCAGGGGAACACAGCCCTCCACCTGTGTGGCCATGTGGACACCATCCAGTTCTTAGTTTCCAAC
GGGCTCAAAATTGATATTTGCAATCATCAAGGTGCTACCCCTTTAGTTCTGGCAAAGCGCCGGG
GTGTGAATAAAGATGTCATCCGACTGCTGGAGTCTTTGGAAGAACAGGAAGTAAAAGGATTTAA
CAGAGGCACACACTCGAAATTGGAGACCATGCAGACGGCGGAGAGCGAAAGTGCCATGGAAAGC
CATTCACTGCTCAACCCCAATCTCCAGCAAGGCGAAGGAGTCCTGTCCAGCTTCCGGACTACGT
GGCAGGAATTTGTGGAGGACCTGGGTTTCTGGAGGGTCTTGCTCTTGATCTTGGTCATTGCTTT
GCTTTCTCTGGGCATTGCCTACTACGTGAGTGGGGTGCTGCCCTTTGTGGATAACCAGCCTGGG
CTGGTGCACTGAGGGCTCTCGGACGTAAGGCAAGGGGCAGCTGGTGTGGCTTTTCAGTTCTTAG
ACCATTTGTTAGCACAAGGCAGTGAGGCCTGTCCGTGTTTAGGACTTTTATTTACTGTGACGCT
TACAGAAGAATGATGTCCCCTCTGAACTTCACCCTGTAGTTGGCTATACTGCGTCCTGATGCCA
CCCTCTGACGCAGCCGGGTCCAAGGAAGAATTCTCCAGGCTTGTGTGACCCAAGTGTGGTGGAC
ACTGAAGGTAGAGGCTTGGGAGGCCTCAGAGCGGGGCCTGACCTTGATGGAGGAGCAGTGGCCA
TCTAGGATTCCATTCGCTAGTGGCTTTGTTTTTTTGTTGTTTTTTTTTTTTTTAATTTACTTTC
CTGGCAAGAGGAGGGAGAGAAAACTTTCAACTTAAATTTTAATTTCTTTTACAATCTGTATGAC
AAATTAGAACTGTTAGAAACTTTGACTTTAAAAGTTCAGGTTACTCAGACAGTAGACAGGTTTA
GGAAGTTTTTTCGTTAGCATGGATTGACTTGATCAATGTTTAGCGCCATGGAGCGATTTTGATT
CATTCTAAACTGATTGCAGTGTCTGAGAATCAACTCTTTGAGGAGTTCAGCTCACTCTTCAGTC
CCTCCCATTGTTACTTTTGAGATGTCCCATTCAGAAAAACACCAGGAAACCCTTTGTAGTGAAT
AGTTGTTAGAGAAAGAGTGCTCTCCTTCATTATCACCAAACTCGGGAGTGCCGACAAGCCAGCT
GTGTCATGGGCACACCACAGTTAACCCTGGGTCTGAACCCGTCTAAGTCAGCAGGAGCCCAGCC
GTTGGGGTAGGGGGTGTATTTCTGAGTAAAGAGCCCTGAACAGTACCGTGCTGCTGCTACGGTG
TCTTCCCGTGTCCAGGTGCATTATATGAATAGAACGCAGCTTCCCTGCAGTGTCTGAAAGCCCT
CTTTGGTCCTGTGGTATAGAAATCACGTAATTTTTGTTTGTGTTTGTTTTTATATTACAGAGCA
TGGAGGCTTAATAATTGAGTAAAATCTGAAACTTGCAGTGAAGAGCTAACAGTTCTCTTTTCTA
TAGCAAAGGTACCCCTAGCTGACTGTCCTTCTACAAGCCTCTCGCTCACTGACATTTTCTCCTC
TGCTTCCAGATACCCAGTACTGACACTCTTTTCTTTCATGCGGCTTTACCCTGTCTGAAGGAAC
TGTTTACAGCTCCTTACTGGCTGCTTCAGAATCCGCCTGCAGTGTCTTGCTTTTAACTAATCAT
GTTTGGTGAATGCAAGGGGGAAACAGTCTTTTGCTTTTGCACGGAGAACACTAGAATTCAAGTT
CAAAGTGTGTTCAGAATGAGTGCTGTGGAATTCGCTTCCCCTCTGTAAATCAGACTGTGTGATG
TAATACTCTGCCTCTAAGATCCTTGCTTCCTGCCCAGCCCTGGTTTCTGTGCATCATGTGCTCA
ACATTGTTCATTTAACTGCTTCCAATAAATGCATTTATAAATCTTTCA

hide sequence

RefSeq Acc Id:

XM_006241531 ⟹ XP_006241593

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	69,532,303 - 69,553,311 (-)	NCBI
mRatBN7.2	7	67,647,202 - 67,668,180 (-)	NCBI
Rnor_6.0	7	75,279,443 - 75,300,442 (-)	NCBI
Rnor_5.0	7	75,427,579 - 75,448,564 (-)	NCBI

Sequence:

show sequence

CTCTGCCCCGCGTGAGCTCCACCTCTGTGGCCGCCAGCGCCCCGCCCTCAGTCACTGGAGAGGA
GGAGCTGCTGCCTTCATTGCTCCTTCAGGATCAGGGGTGTCCGTCCACCACAGACCATGTCCTA
CGTTTTTGTGAATGACTCTTCACAGACTAATGTGCCCTTGCTTCAAGCTTGCATCGATGGGGAC
TTCACCTATTCTAAGAGGCTTCTGGAAAGTGGCTTTGACCCAAATATCCGAGACAGCAGAGGCA
GAACAGGCCTGCACCTCGCCGCAGCCCGAGGGAACGTGGACATCTGCCAGCTGCTACATAAGTT
TGGTGCTGATCCACTGGCCACGGATTATCAGGGGAACACAGCCCTCCACCTGTGTGGCCATGTG
GACACCATCCAGTTCTTAGTTTCCAACGGGCTCAAAATTGATATTTGCAATCATCAAGGTGCTA
CCCCTTTAGTTCTGGCAAAGCGCCGGGGTGTGAATAAAGATGTCATCCGACTGCTGGAGTCTTT
GGAAGAACAGGAAGTAAAAGGATTTAACAGAGGCACACACTCGAAATTGGAGACCATGCAGACG
GCGGAGAGCGAAAGTGCCATGGAAAGCCATTCACTGCTCAACCCCAATCTCCAGCAAGGCGAAG
GAGTCCTGTCCAGCTTCCGGACTACGTGGCAGGAATTTGTGGAGGACCTGGGTTTCTGGAGGGT
CTTGCTCTTGATCTTGGTCATTGCTTTGCTTTCTCTGGGCATTGCCTACTACGTGAGTGGGGTG
CTGCCCTTTGTGGATAACCAGCCTGGGCTGGTGCACTGAGGGCTCTCGGACGTAAGGCAAGGGG
CAGCTGGTGTGGCTTTTCAGTTCTTAGACCATTTGTTAGCACAAGGCAGTGAGGCCTGTCCGTG
TTTAGGACTTTTATTTACTGTGACGCTTACAGAAGAATGATGTCCCCTCTGAACTTCACCCTGT
AGTTGGCTATACTGCGTCCTGATGCCACCCTCTGACGCAGCCGGGTCCAAGGAAGAATTCTCCA
GGCTTGTGTGACCCAAGTGTGGTGGACACTGAAGGTAGAGGCTTGGGAGGCCTCAGAGCGGGGC
CTGACCTTGATGGAGGAGCAGTGGCCATCTAGGATTCCATTCGCTAGTGGCTTTGTTTTTTTGT
TGTTTTTTTTTTTTTTAATTTACTTTCCTGGCAAGAGGAGGGAGAGAAAACTTTCAACTTAAAT
TTTAATTTCTTTTACAATCTGTATGACAAATTAGAACTGTTAGAAACTTTGACTTTAAAAGTTC
AGGTTACTCAGACAGTAGACAGGTTTAGGAAGTTTTTTCGTTAGCATGGATTGACTTGATCAAT
GTTTAGCGCCATGGAGCGATTTTGATTCATTCTAAACTGATTGCAGTGTCTGAGAATCAACTCT
TTGAGGAGTTCAGCTCACTCTTCAGTCCCTCCCATTGTTACTTTTGAGATGTCCCATTCAGAAA
AACACCAGGAAACCCTTTGTAGTGAATAGTTGTTAGAGAAAGAGTGCTCTCCTTCATTATCACC
AAACTCGGGAGTGCCGACAAGCCAGCTGTGTCATGGGCACACCACAGTTAACCCTGGGTCTGAA
CCCGTCTAAGTCAGCAGGAGCCCAGCCGTTGGGGTAGGGGGTGTATTTCTGAGTAAAGAGCCCT
GAACAGTACCGTGCTGCTGCTACGGTGTCTTCCCGTGTCCAGGTGCATTATATGAATAGAACGC
AGCTTCCCTGCAGTGTCTGAAAGCCCTCTTTGGTCCTGTGGTATAGAAATCACGTAATTTTTGT
TTGTGTTTGTTTTTATATTACAGAGCATGGAGGCTTAATAATTGAGTAAAATCTGAAACTTGCA
GTGAAGAGCTAACAGTTCTCTTTTCTATAGCAAAGGTACCCCTAGCTGACTGTCCTTCTACAAG
CCTCTCGCTCACTGACATTTTCTCCTCTGCTTCCAGATACCCAGTACTGACACTCTTTTCTTTC
ATGCGGCTTTACCCTGTCTGAAGGAACTGTTTACAGCTCCTTACTGGCTGCTTCAGAATCCGCC
TGCAGTGTCTTGCTTTTAACTAATCATGTTTGGTGAATGCAAGGGGGAAACAGTCTTTTGCTTT
TGCACGGAGAACACTAGAATTCAAGTTCAAAGTGTGTTCAGAATGAGTGCTGTGGAATTCGCTT
CCCCTCTGTAAATCAGACTGTGTGATGTAATACTCTGCCTCTAAGATCCTTGCTTCCTGCCCAG
CCCTGGTTTCTGTGCATCATGTGCTCAACATTGTTCATTTAACTGCTTCCAATAAATGCATTTA
TAAATCTTTCA

hide sequence

RefSeq Acc Id:

XM_006241532 ⟹ XP_006241594

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	69,532,303 - 69,552,356 (-)	NCBI
mRatBN7.2	7	67,647,202 - 67,661,774 (-)	NCBI
Rnor_6.0	7	75,279,443 - 75,294,128 (-)	NCBI
Rnor_5.0	7	75,427,579 - 75,448,564 (-)	NCBI

Sequence:

show sequence

TCCCCAGCCCCACAGTTAGAGCTCTTAAATGCATAAGTACATAGTAAAGATTCTAGAAAACAAA
ATATTAGCCTACCCAAACTACCAAGTAGTACTTTTGTGGAAATTGGACATTTTATTTAGACTTA
TTTAAATCTATTGTCTTTTCTAAAAGTTGAGTTGTGACTAAACTCTAGTCAGTAAATCAATAAA
AAAAATTCTAAATATTGCTAGAATACAGTAGACATCCCTGTTTTAGTGTTGTTAGTTTCTTGTT
GGCAGAGGGGAAATTGGGTAAGGGTTCGTTTGTTATCTCAGACAGTGAGAAAGGCTTAGGTCAA
GTGCAGGAATCCAGTCACTTCCCGTACACTGGAGGACACTGTCAAAGACTTTGTTATTGTTGTT
CCACAAGAACTTTCTTGTACTCAGTGATGACAGGGCTGCTTCCTGTGGAGCAGGCCACACGGCT
GAGCTTTATTGTTGTTGAGGTGAGGGGAGTCCATTTGGAATGTGAGTACGTGTGCCTGCTCCCT
TCCTGAGACCTGCGGTACGGTACGCACGCGTACCCTTGGGTTAGGACCAGTCACTGCTCACTGG
GCGGTCTCTGGATCTAAGTTAGGGTTCTGAGTGCACACTGGCACGGTTCGGTTTCCTGAAGCGC
TTGCCTTCTGCTCATTGCAGTTGTATTCTATGTGGAAGTCCCTGGACTCCTTTATAGGGATAAG
AACAACCAGCACCACAGACTCCAGGTCGGACTCCCTCTCCCCCACACTGCTTCCCTCTCTCTGT
GATGTTAGGTAGGGTATGCAGTGAGGTCTGATGGCTCCCCCATGCCGCCTACTCCCAACATGCC
AGTTTTGCTTATAGTTTGCTCCAGCGTCCTAGCTTTAATACCTGCTTCTAATTGCTCCTCCGTA
GGCATGATGCCACCAGTGCATTTGAACCAGGGGAGTAGCACTTTGATGCTTTCCCAGTGACTTT
CAAAATGAAAGACAAATCCATACTGTATGTACTTGATTATTAATACTGGATAGAGAAAGACATG
TAAGGTTATCAGCACAGCCCATACTAAGACACAGGGCCTTTCCGTTAGATTCTGGCCATGAAGC
ATTTGATCCTAGAACTTCTATACTTCGATCCAAGGCTGTGAATTCAGAATTTGGTATGTAAACG
AGAAGCATGTTGGATAGACCTTTCCATCGAGTCTGGCTCTCAGGCTTCCACCCAAACCTCCTTG
CTTGTTATTTGGCTTTAGGTCACAGCTGAGGCCTGAGGGGGAGCGACCATCAGTGCTGCACACA
GTTCTTACTGACGCTGCACCACCCCTCACGCCTCACAGCACATGTCTTGGCAATGCCCACAAGT
CTGCCTGTGGACAGGCCTCGTGCTCACTGCCCTTTACAAACAGAGCCCTCGTGAACAGCCAGTG
TGCTTTCCCGGGCTTGGCTGCTACTCTAGGCATTGTGCTTTTACTATGCCAGCTCTTTTTTCTG
GAGGTTTTCCTCCCTACTAGATGTCACCCCATTGCTAGAAGCTGCTCTGTTACCAAGGGATGGA
TATGCCTTGCAAGCTCATGTCTGCACAGCAGGCCTGGGACAGTACTAACCGCAGACCGAGGACT
AGGTCATACAGCTGGGAAGGATCCAAGCTGGCTTTACTCCCAGGCGGTGCAGCACCACACACAT
CCGGATGGAGTGGCCAAACTCTGACAGCTTCCAGCAACAAGAAAACGGCTCTACAGTCCTGAGA
GCTGCTCCTCACACTGGTCAGACTTCACGTCTCTCCCTCCTGCTTTCTCTGGGATAGTGCAACC
AGCTAACGTGACATATTCCAGGCTCAGGGTGTCCGTCCACCACAGACCATGTCCTACGTTTTTG
TGAATGACTCTTCACAGACTAATGTGCCCTTGCTTCAAGCTTGCATCGATGGGGACTTCACCTA
TTCTAAGAGGCTTCTGGAAAGTGGCTTTGACCCAAATATCCGAGACAGCAGAGGCAGAACAGGC
CTGCACCTCGCCGCAGCCCGAGGGAACGTGGACATCTGCCAGCTGCTACATAAGTTTGGTGCTG
ATCCACTGGCCACGGATTATCAGGGGAACACAGCCCTCCACCTGTGTGGCCATGTGGACACCAT
CCAGTTCTTAGTTTCCAACGGGCTCAAAATTGATATTTGCAATCATCAAGGTGCTACCCCTTTA
GTTCTGGCAAAGCGCCGGGGTGTGAATAAAGATGTCATCCGACTGCTGGAGTCTTTGGAAGAAC
AGGAAGTAAAAGGATTTAACAGAGGCACACACTCGAAATTGGAGACCATGCAGACGGCGGAGAG
CGAAAGTGCCATGGAAAGCCATTCACTGCTCAACCCCAATCTCCAGCAAGGCGAAGGAGTCCTG
TCCAGCTTCCGGACTACGTGGCAGGAATTTGTGGAGGACCTGGGTTTCTGGAGGGTCTTGCTCT
TGATCTTGGTCATTGCTTTGCTTTCTCTGGGCATTGCCTACTACGTGAGTGGGGTGCTGCCCTT
TGTGGATAACCAGCCTGGGCTGGTGCACTGAGGGCTCTCGGACGTAAGGCAAGGGGCAGCTGGT
GTGGCTTTTCAGTTCTTAGACCATTTGTTAGCACAAGGCAGTGAGGCCTGTCCGTGTTTAGGAC
TTTTATTTACTGTGACGCTTACAGAAGAATGATGTCCCCTCTGAACTTCACCCTGTAGTTGGCT
ATACTGCGTCCTGATGCCACCCTCTGACGCAGCCGGGTCCAAGGAAGAATTCTCCAGGCTTGTG
TGACCCAAGTGTGGTGGACACTGAAGGTAGAGGCTTGGGAGGCCTCAGAGCGGGGCCTGACCTT
GATGGAGGAGCAGTGGCCATCTAGGATTCCATTCGCTAGTGGCTTTGTTTTTTTGTTGTTTTTT
TTTTTTTTAATTTACTTTCCTGGCAAGAGGAGGGAGAGAAAACTTTCAACTTAAATTTTAATTT
CTTTTACAATCTGTATGACAAATTAGAACTGTTAGAAACTTTGACTTTAAAAGTTCAGGTTACT
CAGACAGTAGACAGGTTTAGGAAGTTTTTTCGTTAGCATGGATTGACTTGATCAATGTTTAGCG
CCATGGAGCGATTTTGATTCATTCTAAACTGATTGCAGTGTCTGAGAATCAACTCTTTGAGGAG
TTCAGCTCACTCTTCAGTCCCTCCCATTGTTACTTTTGAGATGTCCCATTCAGAAAAACACCAG
GAAACCCTTTGTAGTGAATAGTTGTTAGAGAAAGAGTGCTCTCCTTCATTATCACCAAACTCGG
GAGTGCCGACAAGCCAGCTGTGTCATGGGCACACCACAGTTAACCCTGGGTCTGAACCCGTCTA
AGTCAGCAGGAGCCCAGCCGTTGGGGTAGGGGGTGTATTTCTGAGTAAAGAGCCCTGAACAGTA
CCGTGCTGCTGCTACGGTGTCTTCCCGTGTCCAGGTGCATTATATGAATAGAACGCAGCTTCCC
TGCAGTGTCTGAAAGCCCTCTTTGGTCCTGTGGTATAGAAATCACGTAATTTTTGTTTGTGTTT
GTTTTTATATTACAGAGCATGGAGGCTTAATAATTGAGTAAAATCTGAAACTTGCAGTGAAGAG
CTAACAGTTCTCTTTTCTATAGCAAAGGTACCCCTAGCTGACTGTCCTTCTACAAGCCTCTCGC
TCACTGACATTTTCTCCTCTGCTTCCAGATACCCAGTACTGACACTCTTTTCTTTCATGCGGCT
TTACCCTGTCTGAAGGAACTGTTTACAGCTCCTTACTGGCTGCTTCAGAATCCGCCTGCAGTGT
CTTGCTTTTAACTAATCATGTTTGGTGAATGCAAGGGGGAAACAGTCTTTTGCTTTTGCACGGA
GAACACTAGAATTCAAGTTCAAAGTGTGTTCAGAATGAGTGCTGTGGAATTCGCTTCCCCTCTG
TAAATCAGACTGTGTGATGTAATACTCTGCCTCTAAGATCCTTGCTTCCTGCCCAGCCCTGGTT
TCTGTGCATCATGTGCTCAACATTGTTCATTTAACTGCTTCCAATAAATGCATTTATAAATCTT
TCA

hide sequence

RefSeq Acc Id:

XM_063263262 ⟹ XP_063119332

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	69,532,303 - 69,553,223 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001013970	(Get FASTA)	NCBI Sequence Viewer
	XP_006241592	(Get FASTA)	NCBI Sequence Viewer
	XP_006241593	(Get FASTA)	NCBI Sequence Viewer
	XP_006241594	(Get FASTA)	NCBI Sequence Viewer
	XP_063119332	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI05617	(Get FASTA)	NCBI Sequence Viewer
	BAD05179	(Get FASTA)	NCBI Sequence Viewer
	EDM16394	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000034048
	ENSRNOP00000034048.4
GenBank Protein	Q76K24	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001013970 ⟸ NM_001013948

- UniProtKB:

Q0VGK7 (UniProtKB/Swiss-Prot), Q76K24 (UniProtKB/Swiss-Prot), A6HR28 (UniProtKB/TrEMBL), A0A8I5YBV2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSYVFVNDSSQTNVPLLQACIDGDFTYSKRLLESGFDPNIRDSRGRTGLHLAAARGNVDICQLL
HKFGADPLATDYQGNTALHLCGHVDTIQFLVSNGLKIDICNHQGATPLVLAKRRGVNKDVIRLL
ESLEEQEVKGFNRGTHSKLETMQTAESESAMESHSLLNPNLQQGEGVLSSFRTTWQEFVEDLGF
WRVLLLILVIALLSLGIAYYVSGVLPFVDNQPGLVH

hide sequence

RefSeq Acc Id:	XP_006241593 ⟸ XM_006241531
- Peptide Label:	isoform X1
- UniProtKB:	Q0VGK7 (UniProtKB/Swiss-Prot), Q76K24 (UniProtKB/Swiss-Prot), A6HR28 (UniProtKB/TrEMBL), A0A8I5YBV2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSYVFVNDSSQTNVPLLQACIDGDFTYSKRLLESGFDPNIRDSRGRTGLHLAAARGNVDICQLL HKFGADPLATDYQGNTALHLCGHVDTIQFLVSNGLKIDICNHQGATPLVLAKRRGVNKDVIRLL ESLEEQEVKGFNRGTHSKLETMQTAESESAMESHSLLNPNLQQGEGVLSSFRTTWQEFVEDLGF WRVLLLILVIALLSLGIAYYVSGVLPFVDNQPGLVH hide sequence

RefSeq Acc Id:	XP_006241592 ⟸ XM_006241530
- Peptide Label:	isoform X1
- UniProtKB:	Q0VGK7 (UniProtKB/Swiss-Prot), Q76K24 (UniProtKB/Swiss-Prot), A6HR28 (UniProtKB/TrEMBL), A0A8I5YBV2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSYVFVNDSSQTNVPLLQACIDGDFTYSKRLLESGFDPNIRDSRGRTGLHLAAARGNVDICQLL HKFGADPLATDYQGNTALHLCGHVDTIQFLVSNGLKIDICNHQGATPLVLAKRRGVNKDVIRLL ESLEEQEVKGFNRGTHSKLETMQTAESESAMESHSLLNPNLQQGEGVLSSFRTTWQEFVEDLGF WRVLLLILVIALLSLGIAYYVSGVLPFVDNQPGLVH hide sequence

RefSeq Acc Id:	XP_006241594 ⟸ XM_006241532
- Peptide Label:	isoform X1
- UniProtKB:	Q0VGK7 (UniProtKB/Swiss-Prot), Q76K24 (UniProtKB/Swiss-Prot), A6HR28 (UniProtKB/TrEMBL), A0A8I5YBV2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSYVFVNDSSQTNVPLLQACIDGDFTYSKRLLESGFDPNIRDSRGRTGLHLAAARGNVDICQLL HKFGADPLATDYQGNTALHLCGHVDTIQFLVSNGLKIDICNHQGATPLVLAKRRGVNKDVIRLL ESLEEQEVKGFNRGTHSKLETMQTAESESAMESHSLLNPNLQQGEGVLSSFRTTWQEFVEDLGF WRVLLLILVIALLSLGIAYYVSGVLPFVDNQPGLVH hide sequence

Ensembl Acc Id:

ENSRNOP00000034048 ⟸ ENSRNOT00000036904

Ensembl Acc Id:

ENSRNOP00000076722 ⟸ ENSRNOT00000099363

RefSeq Acc Id:	XP_063119332 ⟸ XM_063263262
- Peptide Label:	isoform X1
- UniProtKB:	Q76K24 (UniProtKB/Swiss-Prot), Q0VGK7 (UniProtKB/Swiss-Prot), A6HR28 (UniProtKB/TrEMBL), A0A8I5YBV2 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q76K24-F1-model_v2	AlphaFold	Q76K24	1-228	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309382	AgrOrtholog
BioCyc Gene	G2FUF-33642	BioCyc
Ensembl Genes	ENSRNOG00000025504	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000036904	ENTREZGENE
	ENSRNOT00000036904.6	UniProtKB/Swiss-Prot
Gene3D-CATH	1.25.40.20	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7453107	IMAGE-MGC_LOAD
InterPro	Ankyrin_rpt	UniProtKB/Swiss-Prot
	Ankyrin_rpt-contain_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:299982	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:124899	IMAGE-MGC_LOAD
NCBI Gene	299982	ENTREZGENE
PANTHER	ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39	UniProtKB/Swiss-Prot
	ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED	UniProtKB/Swiss-Prot
Pfam	Ank_2	UniProtKB/Swiss-Prot
PhenoGen	Ankrd46	PhenoGen
PROSITE	ANK_REP_REGION	UniProtKB/Swiss-Prot
	ANK_REPEAT	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000025504	RatGTEx
SMART	ANK	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF48403	UniProtKB/Swiss-Prot
UniProt	A0A8I5YBV2	ENTREZGENE
	A6HR28	ENTREZGENE, UniProtKB/TrEMBL
	ANR46_RAT	UniProtKB/Swiss-Prot
	Q0VGK7	ENTREZGENE
	Q76K24	ENTREZGENE
UniProt Secondary	Q0VGK7	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2006-03-30	Ankrd46	ankyrin repeat domain 46	RGD1309382	similar to RIKEN cDNA C730048E16	Symbol and Name updated	1299863	APPROVED
2005-12-06	RGD1309382	similar to RIKEN cDNA C730048E16	RGD1309382_predicted	similar to RIKEN cDNA C730048E16 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1309382_predicted	similar to RIKEN cDNA C730048E16 (predicted)	LOC299982_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC299982_predicted	similar to RIKEN cDNA C730048E16 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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