Ankrd46 (ankyrin repeat domain 46) - Rat Genome Database

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Gene: Ankrd46 (ankyrin repeat domain 46) Chinchilla lanigera
Analyze
Symbol: Ankrd46
Name: ankyrin repeat domain 46
RGD ID: 8994292
Description: ASSOCIATED WITH Cohen syndrome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ankyrin repeat domain-containing protein 46
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495541715,740,108 - 15,750,627 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
Ankrd46
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495541715,740,108 - 15,750,627 (-)NCBIChiLan1.0ChiLan1.0
ANKRD46
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388100,509,752 - 100,559,759 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8100,509,752 - 100,559,784 (-)EnsemblGRCh38hg38GRCh38
GRCh378101,521,980 - 101,571,987 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368101,602,176 - 101,641,188 (-)NCBINCBI36Build 36hg18NCBI36
Celera897,718,378 - 97,757,379 (-)NCBICelera
Cytogenetic Map8q22.3NCBI
HuRef896,721,557 - 96,771,579 (-)NCBIHuRef
CHM1_18101,562,856 - 101,612,900 (-)NCBICHM1_1
T2T-CHM13v2.08101,635,790 - 101,685,789 (-)NCBIT2T-CHM13v2.0
Ankrd46
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391536,477,814 - 36,496,937 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1536,477,814 - 36,496,966 (-)EnsemblGRCm39 Ensembl
GRCm381536,477,668 - 36,496,791 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1536,477,668 - 36,496,820 (-)EnsemblGRCm38mm10GRCm38
MGSCv371536,407,423 - 36,426,546 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361536,422,257 - 36,441,340 (-)NCBIMGSCv36mm8
Celera1537,105,451 - 37,124,628 (-)NCBICelera
Cytogenetic Map15B3.1NCBI
cM Map1514.47NCBI
Ankrd46
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8769,532,303 - 69,553,311 (-)NCBIGRCr8
mRatBN7.2767,647,202 - 67,668,180 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl767,647,204 - 67,668,132 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx769,535,611 - 69,556,581 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0771,738,219 - 71,759,188 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0771,606,089 - 71,627,059 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0775,279,443 - 75,300,442 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl775,279,446 - 75,288,365 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0775,427,579 - 75,448,564 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4771,986,088 - 72,007,057 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1772,006,817 - 72,027,776 (-)NCBI
Celera764,727,370 - 64,748,339 (-)NCBICelera
Cytogenetic Map7q22NCBI
ANKRD46
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27117,858,556 - 117,910,616 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1893,397,355 - 93,449,431 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0897,151,126 - 97,203,196 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1899,322,923 - 99,376,251 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl899,322,930 - 99,376,251 (-)Ensemblpanpan1.1panPan2
ANKRD46
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1132,384,007 - 2,415,187 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl132,385,611 - 2,498,364 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha132,381,125 - 2,412,315 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0132,537,108 - 2,568,299 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl132,537,109 - 2,651,455 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1132,381,669 - 2,412,884 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0132,493,322 - 2,524,543 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0132,510,688 - 2,541,879 (-)NCBIUU_Cfam_GSD_1.0
Ankrd46
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530335,329,657 - 35,356,371 (+)NCBIHiC_Itri_2
SpeTri2.0NW_00493647042,755,799 - 42,782,479 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANKRD46
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl436,400,660 - 36,444,335 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1436,400,610 - 36,445,590 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2439,323,164 - 39,368,112 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANKRD46
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1895,369,941 - 95,412,737 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl895,369,901 - 95,412,688 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603945,273,760 - 45,316,265 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ankrd46
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247637,416,669 - 7,445,411 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247637,416,669 - 7,445,418 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: XM_013512830   ⟹   XP_013368284
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541715,740,108 - 15,750,627 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013512831   ⟹   XP_013368285
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541715,740,108 - 15,750,627 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013512832   ⟹   XP_013368286
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541715,740,108 - 15,748,954 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013368284 (Get FASTA)   NCBI Sequence Viewer  
  XP_013368285 (Get FASTA)   NCBI Sequence Viewer  
  XP_013368286 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000024772
  ENSCLAP00000024772.1
  ENSCLAP00000024773
  ENSCLAP00000024773.1
RefSeq Acc Id: XP_013368285   ⟸   XM_013512831
- UniProtKB: A0A8C2W3S4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013368284   ⟸   XM_013512830
- UniProtKB: A0A8C2W3S4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013368286   ⟸   XM_013512832
- UniProtKB: A0A8C2W3S4 (UniProtKB/TrEMBL)
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000017008 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000025012 ENTREZGENE
  ENSCLAT00000025012.1 UniProtKB/TrEMBL
  ENSCLAT00000025013 ENTREZGENE
  ENSCLAT00000025013.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
NCBI Gene Ankrd46 ENTREZGENE
PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  ANK_REP_REGION DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
SMART ANK UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/TrEMBL
UniProt A0A8C2W3S4 ENTREZGENE, UniProtKB/TrEMBL