Symbol:
Bri3
Name:
brain protein I3
RGD ID:
1309187
Description:
Predicted to enable identical protein binding activity. Predicted to be located in lysosomal membrane and perinuclear region of cytoplasm. Orthologous to human BRI3 (brain protein I3); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
LOC304284; membrane protein BRI3; MGC105711
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
BRI3 (brain protein I3) HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):
Bri3 (brain protein I3) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Bri3 (brain protein I3) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
BRI3 (brain protein I3) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
BRI3 (brain protein I3) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Bri3 (brain protein I3) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
BRI3 (brain protein I3) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
BRI3 (brain protein I3) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Bri3 (brain protein I3) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Other homologs 2
Homo sapiens (human):
CHLSN (cholesin) HGNC
OMA
Alliance orthologs 3
Homo sapiens (human):
BRI3 (brain protein I3)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Bri3 (brain protein I3)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
bri3 (brain protein I3)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Drosophila melanogaster (fruit fly):
CG12012
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid)
Caenorhabditis elegans (roundworm):
F11G11.5
Alliance
DIOPT (Ensembl Compara|PANTHER)
Xenopus tropicalis (tropical clawed frog):
bri3
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 12 15,454,673 - 15,478,319 (-) NCBI GRCr8 mRatBN7.2 12 10,341,007 - 10,364,655 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 12 10,341,011 - 10,364,735 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 12 11,148,230 - 11,171,735 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 12 11,771,517 - 11,795,029 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 12 10,795,272 - 10,818,603 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 12 12,322,247 - 12,330,929 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 12 12,322,243 - 12,330,939 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 12 14,374,635 - 14,383,317 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 12 10,670,023 - 10,678,698 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 12 10,699,950 - 10,708,633 (-) NCBI Celera 12 12,141,016 - 12,149,572 (-) NCBI Celera Cytogenetic Map 12 p11 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Bri3 Rat (+)-schisandrin B multiple interactions EXP 6480464 schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of BRI3 mRNA] CTD PMID:31150632 Bri3 Rat (1->4)-beta-D-glucan multiple interactions ISO Bri3 (Mus musculus) 6480464 [perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of BRI3 mRNA CTD PMID:36331819 Bri3 Rat 1,2-dichloroethane decreases expression ISO Bri3 (Mus musculus) 6480464 ethylene dichloride results in decreased expression of BRI3 mRNA CTD PMID:28189721 and PMID:28960355 Bri3 Rat 1,2-dimethylhydrazine decreases expression ISO Bri3 (Mus musculus) 6480464 1 and 2-Dimethylhydrazine results in decreased expression of BRI3 mRNA CTD PMID:22206623 Bri3 Rat 1,2-dimethylhydrazine multiple interactions ISO Bri3 (Mus musculus) 6480464 [1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of BRI3 mRNA CTD PMID:22206623 Bri3 Rat 17beta-estradiol decreases expression ISO BRI3 (Homo sapiens) 6480464 Estradiol results in decreased expression of BRI3 mRNA CTD PMID:23019147 Bri3 Rat 17beta-estradiol multiple interactions ISO BRI3 (Homo sapiens) 6480464 [Estradiol co-treated with Norethindrone Acetate] results in increased expression of BRI3 mRNA CTD PMID:22217510 Bri3 Rat 17beta-estradiol decreases expression ISO Bri3 (Mus musculus) 6480464 Estradiol results in decreased expression of BRI3 mRNA CTD PMID:39298647 Bri3 Rat 17beta-hydroxy-17-methylestra-4,9,11-trien-3-one affects splicing ISO BRI3 (Homo sapiens) 6480464 Metribolone affects the splicing of BRI3 mRNA CTD PMID:17010196 Bri3 Rat 2,2',4,4'-Tetrabromodiphenyl ether multiple interactions ISO Bri3 (Mus musculus) 6480464 [Flame Retardants results in increased abundance of 2 more ... CTD PMID:38995820 Bri3 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression EXP 6480464 Tetrachlorodibenzodioxin results in decreased expression of BRI3 mRNA CTD PMID:18796159 and PMID:21215274 Bri3 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression EXP 6480464 Tetrachlorodibenzodioxin affects the expression of BRI3 mRNA CTD PMID:34747641 Bri3 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO Bri3 (Mus musculus) 6480464 Tetrachlorodibenzodioxin affects the expression of BRI3 mRNA CTD PMID:21570461 Bri3 Rat 2-hydroxypropanoic acid increases expression ISO BRI3 (Homo sapiens) 6480464 Lactic Acid results in increased expression of BRI3 mRNA CTD PMID:30851411 Bri3 Rat 4,4'-sulfonyldiphenol decreases expression ISO Bri3 (Mus musculus) 6480464 bisphenol S results in decreased expression of BRI3 mRNA CTD PMID:33297965 and PMID:39298647 Bri3 Rat acrylamide increases expression ISO BRI3 (Homo sapiens) 6480464 Acrylamide results in increased expression of BRI3 mRNA CTD PMID:32763439 Bri3 Rat aflatoxin B1 decreases methylation ISO BRI3 (Homo sapiens) 6480464 Aflatoxin B1 results in decreased methylation of BRI3 intron CTD PMID:30157460 Bri3 Rat all-trans-retinoic acid increases expression ISO BRI3 (Homo sapiens) 6480464 Tretinoin results in increased expression of BRI3 mRNA CTD PMID:33167477 Bri3 Rat benzo[a]pyrene increases expression ISO Bri3 (Mus musculus) 6480464 Benzo(a)pyrene results in increased expression of BRI3 mRNA CTD PMID:22228805 Bri3 Rat benzo[a]pyrene affects methylation ISO BRI3 (Homo sapiens) 6480464 Benzo(a)pyrene affects the methylation of BRI3 intron CTD PMID:30157460 Bri3 Rat benzo[e]pyrene increases methylation ISO BRI3 (Homo sapiens) 6480464 benzo(e)pyrene results in increased methylation of BRI3 intron CTD PMID:30157460 Bri3 Rat bisphenol A increases expression EXP 6480464 bisphenol A results in increased expression of BRI3 mRNA CTD PMID:25181051 more ... Bri3 Rat bisphenol A increases expression ISO Bri3 (Mus musculus) 6480464 bisphenol A results in increased expression of BRI3 mRNA CTD PMID:32156529 and PMID:38074096 Bri3 Rat bisphenol A decreases expression ISO Bri3 (Mus musculus) 6480464 bisphenol A results in decreased expression of BRI3 mRNA CTD PMID:30245210 Bri3 Rat bisphenol A affects expression ISO BRI3 (Homo sapiens) 6480464 bisphenol A affects the expression of BRI3 mRNA CTD PMID:30903817 Bri3 Rat carbon nanotube decreases expression ISO Bri3 (Mus musculus) 6480464 Nanotubes more ... CTD PMID:25554681 and PMID:25620056 Bri3 Rat chlordecone increases expression ISO Bri3 (Mus musculus) 6480464 Chlordecone results in increased expression of BRI3 mRNA CTD PMID:33711761 Bri3 Rat chlorpyrifos increases expression ISO Bri3 (Mus musculus) 6480464 Chlorpyrifos results in increased expression of BRI3 mRNA CTD PMID:37019170 Bri3 Rat ciguatoxin CTX1B affects expression ISO Bri3 (Mus musculus) 6480464 Ciguatoxins affects the expression of BRI3 mRNA CTD PMID:18353800 Bri3 Rat clofibrate decreases expression ISO Bri3 (Mus musculus) 6480464 Clofibrate results in decreased expression of BRI3 mRNA CTD PMID:17585979 Bri3 Rat copper(II) sulfate increases expression ISO BRI3 (Homo sapiens) 6480464 Copper Sulfate results in increased expression of BRI3 mRNA CTD PMID:19549813 Bri3 Rat coumestrol decreases expression ISO BRI3 (Homo sapiens) 6480464 Coumestrol results in decreased expression of BRI3 mRNA CTD PMID:19167446 Bri3 Rat cyclosporin A decreases expression ISO Bri3 (Mus musculus) 6480464 Cyclosporine results in decreased expression of BRI3 mRNA CTD PMID:19770486 Bri3 Rat cyclosporin A increases expression ISO BRI3 (Homo sapiens) 6480464 Cyclosporine results in increased expression of BRI3 mRNA CTD PMID:25562108 Bri3 Rat diazinon increases methylation ISO BRI3 (Homo sapiens) 6480464 Diazinon results in increased methylation of BRI3 gene CTD PMID:22964155 Bri3 Rat diuron decreases expression ISO BRI3 (Homo sapiens) 6480464 Diuron results in decreased expression of BRI3 mRNA CTD PMID:35967413 Bri3 Rat doxorubicin increases expression ISO BRI3 (Homo sapiens) 6480464 Doxorubicin results in increased expression of BRI3 mRNA CTD PMID:29803840 Bri3 Rat epoxiconazole affects expression ISO Bri3 (Mus musculus) 6480464 epoxiconazole affects the expression of BRI3 mRNA CTD PMID:35436446 Bri3 Rat ethanol increases expression ISO Bri3 (Mus musculus) 6480464 Ethanol results in increased expression of BRI3 mRNA CTD PMID:30319688 Bri3 Rat fipronil decreases expression EXP 6480464 fipronil results in decreased expression of BRI3 mRNA CTD PMID:23962444 Bri3 Rat fluoxetine increases expression ISO BRI3 (Homo sapiens) 6480464 Fluoxetine results in increased expression of BRI3 mRNA CTD PMID:37386098 Bri3 Rat folic acid multiple interactions ISO Bri3 (Mus musculus) 6480464 [1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of BRI3 mRNA CTD PMID:22206623 Bri3 Rat gentamycin decreases expression EXP 6480464 Gentamicins results in decreased expression of BRI3 mRNA CTD PMID:22061828 Bri3 Rat gentamycin increases expression EXP 6480464 Gentamicins results in increased expression of BRI3 mRNA CTD PMID:33387578 Bri3 Rat hypochlorous acid decreases expression ISO Bri3 (Mus musculus) 6480464 Hypochlorous Acid results in decreased expression of BRI3 mRNA CTD PMID:19376150 Bri3 Rat inulin multiple interactions ISO Bri3 (Mus musculus) 6480464 [perfluorooctane sulfonic acid co-treated with Inulin] results in increased expression of BRI3 mRNA CTD PMID:36331819 Bri3 Rat lead diacetate decreases expression ISO Bri3 (Mus musculus) 6480464 lead acetate results in decreased expression of BRI3 mRNA CTD PMID:21829687 Bri3 Rat lead diacetate increases expression ISO BRI3 (Homo sapiens) 6480464 lead acetate results in increased expression of BRI3 mRNA CTD PMID:38568856 Bri3 Rat leflunomide decreases expression ISO Bri3 (Mus musculus) 6480464 leflunomide results in decreased expression of BRI3 mRNA CTD PMID:19751817 Bri3 Rat methapyrilene increases methylation ISO BRI3 (Homo sapiens) 6480464 Methapyrilene results in increased methylation of BRI3 intron CTD PMID:30157460 Bri3 Rat methyl methanesulfonate increases expression ISO BRI3 (Homo sapiens) 6480464 Methyl Methanesulfonate results in increased expression of BRI3 mRNA CTD PMID:23649840 Bri3 Rat Monobutylphthalate decreases expression ISO Bri3 (Mus musculus) 6480464 monobutyl phthalate results in decreased expression of BRI3 mRNA CTD PMID:35278568 Bri3 Rat N-nitrosodiethylamine decreases expression EXP 6480464 Diethylnitrosamine results in decreased expression of BRI3 mRNA CTD PMID:19638242 Bri3 Rat paracetamol increases expression ISO BRI3 (Homo sapiens) 6480464 Acetaminophen results in increased expression of BRI3 mRNA CTD PMID:29067470 Bri3 Rat paracetamol increases expression EXP 6480464 Acetaminophen results in increased expression of BRI3 mRNA CTD PMID:33387578 Bri3 Rat perfluorooctane-1-sulfonic acid multiple interactions ISO Bri3 (Mus musculus) 6480464 [perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of BRI3 mRNA more ... CTD PMID:36331819 Bri3 Rat phenobarbital increases expression ISO Bri3 (Mus musculus) 6480464 Phenobarbital results in increased expression of BRI3 mRNA CTD PMID:19270015 Bri3 Rat propiconazole decreases expression ISO Bri3 (Mus musculus) 6480464 propiconazole results in decreased expression of BRI3 mRNA CTD PMID:21278054 Bri3 Rat rac-lactic acid increases expression ISO BRI3 (Homo sapiens) 6480464 Lactic Acid results in increased expression of BRI3 mRNA CTD PMID:30851411 Bri3 Rat silicon dioxide increases expression ISO BRI3 (Homo sapiens) 6480464 Silicon Dioxide analog results in increased expression of BRI3 mRNA CTD PMID:25895662 Bri3 Rat silicon dioxide increases expression ISO Bri3 (Mus musculus) 6480464 Silicon Dioxide results in increased expression of BRI3 mRNA CTD PMID:29203145 Bri3 Rat sodium arsenite increases expression ISO BRI3 (Homo sapiens) 6480464 sodium arsenite results in increased expression of BRI3 mRNA CTD PMID:38568856 Bri3 Rat Soman decreases expression EXP 6480464 Soman results in decreased expression of BRI3 mRNA CTD PMID:19281266 Bri3 Rat sunitinib increases expression ISO BRI3 (Homo sapiens) 6480464 Sunitinib results in increased expression of BRI3 mRNA CTD PMID:31533062 Bri3 Rat temozolomide decreases expression ISO BRI3 (Homo sapiens) 6480464 Temozolomide results in decreased expression of BRI3 mRNA CTD PMID:31758290 Bri3 Rat tetrachloromethane multiple interactions EXP 6480464 schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of BRI3 mRNA] CTD PMID:31150632 Bri3 Rat tetrachloromethane decreases expression EXP 6480464 Carbon Tetrachloride results in decreased expression of BRI3 mRNA CTD PMID:31150632 Bri3 Rat thiram increases expression ISO BRI3 (Homo sapiens) 6480464 Thiram results in increased expression of BRI3 mRNA CTD PMID:38568856 Bri3 Rat titanium dioxide increases methylation ISO Bri3 (Mus musculus) 6480464 titanium dioxide results in increased methylation of BRI3 promoter CTD PMID:35295148 Bri3 Rat triphenyl phosphate affects expression ISO BRI3 (Homo sapiens) 6480464 triphenyl phosphate affects the expression of BRI3 mRNA CTD PMID:37042841 Bri3 Rat tungsten increases expression ISO Bri3 (Mus musculus) 6480464 Tungsten results in increased expression of BRI3 mRNA CTD PMID:30912803 Bri3 Rat valproic acid increases expression ISO BRI3 (Homo sapiens) 6480464 Valproic Acid results in increased expression of BRI3 mRNA CTD PMID:23179753 and PMID:28001369 Bri3 Rat valproic acid affects expression ISO BRI3 (Homo sapiens) 6480464 Valproic Acid affects the expression of BRI3 mRNA CTD PMID:25979313
(+)-schisandrin B (EXP) (1->4)-beta-D-glucan (ISO) 1,2-dichloroethane (ISO) 1,2-dimethylhydrazine (ISO) 17beta-estradiol (ISO) 17beta-hydroxy-17-methylestra-4,9,11-trien-3-one (ISO) 2,2',4,4'-Tetrabromodiphenyl ether (ISO) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2-hydroxypropanoic acid (ISO) 4,4'-sulfonyldiphenol (ISO) acrylamide (ISO) aflatoxin B1 (ISO) all-trans-retinoic acid (ISO) benzo[a]pyrene (ISO) benzo[e]pyrene (ISO) bisphenol A (EXP,ISO) carbon nanotube (ISO) chlordecone (ISO) chlorpyrifos (ISO) ciguatoxin CTX1B (ISO) clofibrate (ISO) copper(II) sulfate (ISO) coumestrol (ISO) cyclosporin A (ISO) diazinon (ISO) diuron (ISO) doxorubicin (ISO) epoxiconazole (ISO) ethanol (ISO) fipronil (EXP) fluoxetine (ISO) folic acid (ISO) gentamycin (EXP) hypochlorous acid (ISO) inulin (ISO) lead diacetate (ISO) leflunomide (ISO) methapyrilene (ISO) methyl methanesulfonate (ISO) Monobutylphthalate (ISO) N-nitrosodiethylamine (EXP) paracetamol (EXP,ISO) perfluorooctane-1-sulfonic acid (ISO) phenobarbital (ISO) propiconazole (ISO) rac-lactic acid (ISO) silicon dioxide (ISO) sodium arsenite (ISO) Soman (EXP) sunitinib (ISO) temozolomide (ISO) tetrachloromethane (EXP) thiram (ISO) titanium dioxide (ISO) triphenyl phosphate (ISO) tungsten (ISO) valproic acid (ISO)
Bri3 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 12 15,454,673 - 15,478,319 (-) NCBI GRCr8 mRatBN7.2 12 10,341,007 - 10,364,655 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 12 10,341,011 - 10,364,735 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 12 11,148,230 - 11,171,735 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 12 11,771,517 - 11,795,029 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 12 10,795,272 - 10,818,603 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 12 12,322,247 - 12,330,929 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 12 12,322,243 - 12,330,939 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 12 14,374,635 - 14,383,317 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 12 10,670,023 - 10,678,698 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 12 10,699,950 - 10,708,633 (-) NCBI Celera 12 12,141,016 - 12,149,572 (-) NCBI Celera Cytogenetic Map 12 p11 NCBI
BRI3 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 7 98,281,686 - 98,323,430 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 7 98,252,379 - 98,310,441 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 7 97,910,998 - 97,922,275 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 7 97,748,923 - 97,758,775 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 7 97,555,637 - 97,565,490 NCBI Celera 7 92,604,881 - 92,616,177 (+) NCBI Celera Cytogenetic Map 7 q21.3 NCBI HuRef 7 92,511,488 - 92,522,664 (+) NCBI HuRef CHM1_1 7 97,841,014 - 97,852,283 (+) NCBI CHM1_1 T2T-CHM13v2.0 7 99,512,427 - 99,562,122 (+) NCBI T2T-CHM13v2.0 CRA_TCAGchr7v2 7 97,235,846 - 97,247,141 (+) NCBI
Bri3 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 5 144,181,247 - 144,383,567 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 5 144,181,247 - 144,383,567 (+) Ensembl GRCm39 Ensembl GRCm38 5 144,244,437 - 144,264,573 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 5 144,244,437 - 144,446,757 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 5 145,005,306 - 145,025,442 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 5 144,508,763 - 144,518,100 (+) NCBI MGSCv36 mm8 Celera 5 141,229,097 - 141,249,588 (+) NCBI Celera Cytogenetic Map 5 G2 NCBI
Bri3 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955460 14,157,685 - 14,174,192 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955460 14,165,874 - 14,174,464 (+) NCBI ChiLan1.0 ChiLan1.0
BRI3 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 6 116,128,238 - 116,137,820 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 7 164,392,910 - 164,402,454 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 7 6,231,026 - 6,240,581 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 7 103,735,482 - 103,756,479 (+) NCBI panpan1.1 PanPan1.1 panPan2
BRI3 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 6 11,046,861 - 11,065,180 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 6 11,054,189 - 11,064,137 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 6 12,673,327 - 12,691,622 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 6 11,047,430 - 11,065,691 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 6 11,054,733 - 11,064,667 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 6 10,916,158 - 10,934,403 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 6 10,895,944 - 10,914,209 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 6 11,138,327 - 11,148,254 (-) NCBI UU_Cfam_GSD_1.0
Bri3
BRI3 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 3 5,463,675 - 5,471,391 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 3 5,463,609 - 5,471,398 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 3 5,512,287 - 5,526,773 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
BRI3
Bri3
.
Predicted Target Of
Count of predictions: 39 Count of miRNA genes: 33 Interacting mature miRNAs: 39 Transcripts: ENSRNOT00000001336 Prediction methods: Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
2312418 Kidm41 Kidney mass QTL 41 3.7 0.0001 kidney mass (VT:0002707) single kidney wet weight to body weight ratio (CMO:0000622) 12 1 19611090 Rat 8552964 Pigfal17 Plasma insulin-like growth factor 1 level QTL 17 3.5 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 12 5564495 46669029 Rat 7411641 Foco19 Food consumption QTL 19 27.7 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 12 5564495 46669029 Rat 1331739 Hrtrt14 Heart rate QTL 14 3.56232 heart pumping trait (VT:2000009) heart rate (CMO:0000002) 12 9318216 12829686 Rat 9590147 Scort7 Serum corticosterone level QTL 7 13.61 0.001 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 12 1 42110980 Rat 8552912 Pigfal6 Plasma insulin-like growth factor 1 level QTL 6 5 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 12 5564498 46669029 Rat 1549829 Scl48 Serum cholesterol level QTL 48 5 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 12 9603277 46669029 Rat 10059594 Kidm46 Kidney mass QTL 46 3.79 0.025 kidney mass (VT:0002707) both kidneys wet weight to body weight ratio (CMO:0000340) 12 6107579 46669029 Rat 61331 Eau2 Experimental allergic uveoretinitis QTL 2 0.0005 uvea integrity trait (VT:0010551) experimental autoimmune uveitis score (CMO:0001504) 12 8525423 28064601 Rat 1581516 Cm56 Cardiac mass QTL 56 4.2 0.05 heart left ventricle mass (VT:0007031) heart left ventricle weight to body weight ratio (CMO:0000530) 12 1 29333307 Rat 9590086 Insglur6 Insulin/glucose ratio QTL 6 18.97 0.001 blood insulin amount (VT:0001560) calculated plasma insulin level (CMO:0002170) 12 1 42110980 Rat 8552918 Pigfal7 Plasma insulin-like growth factor 1 level QTL 7 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 12 5564495 46669029 Rat 6893681 Bw109 Body weight QTL 109 2.3 0.004 body mass (VT:0001259) body weight (CMO:0000012) 12 1 23297788 Rat 1302792 Scl21 Serum cholesterol level QTL 21 3.8 0.0011 blood cholesterol amount (VT:0000180) plasma total cholesterol level (CMO:0000585) 12 7196730 46669029 Rat 1598855 Bp294 Blood pressure QTL 294 3.5 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 12 1 34851688 Rat 1600391 Edcs2 Endometrial carcinoma susceptibility QTL2 3.5 0.01 uterus morphology trait (VT:0001120) percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759) 12 6833190 17870186 Rat 10755457 Coatc14 Coat color QTL 14 0.01759 coat/hair pigmentation trait (VT:0010463) pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) 12 1 22591684 Rat 724526 Uae3 Urinary albumin excretion QTL 3 4.9 0.0001 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) 12 3906969 10373166 Rat 634351 Apr5 Acute phase response QTL 5 6.7 blood interleukin-6 amount (VT:0008595) plasma interleukin-6 level (CMO:0001927) 12 1 44503507 Rat 8694179 Bw150 Body weight QTL 150 2.9 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 12 1 42110980 Rat 634350 Apr4 Acute phase response QTL 4 6 orosomucoid 1 amount (VT:0010541) plasma orosomucoid 1 level (CMO:0001467) 12 1172005 46172005 Rat 7411545 Bw128 Body weight QTL 128 5.2 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 12 1 42110980 Rat 7411547 Bw129 Body weight QTL 129 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 6 5564495 46669029 Rat 7387292 Kidm42 Kidney mass QTL 42 3.03 0.0004 kidney mass (VT:0002707) left kidney wet weight (CMO:0000083) 12 1 36247923 Rat 1300157 Rf21 Renal function QTL 21 4.4 renal blood flow trait (VT:2000006) absolute change in renal blood flow rate (CMO:0001168) 12 9318216 32103380 Rat 737979 Pia22 Pristane induced arthritis QTL 22 53.1 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 12 1 44465750 Rat 7411586 Foco5 Food consumption QTL 5 5.4 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 12 1 42110980 Rat 2303575 Insul14 Insulin level QTL 14 4 blood insulin amount (VT:0001560) blood insulin level (CMO:0000349) 12 1 42450532 Rat 7411588 Foco6 Food consumption QTL 6 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 12 5564495 46669029 Rat 2302042 Pia38 Pristane induced arthritis QTL 38 3.5 0.001 blood immunoglobulin amount (VT:0002460) serum immunoglobulin G1 level (CMO:0002115) 12 1 44503507 Rat 7411595 Foco9 Food consumption QTL 9 4 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 12 1 42110980 Rat 7411597 Foco10 Food consumption QTL 10 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 12 5564495 46669029 Rat 2293086 Iddm30 Insulin dependent diabetes mellitus QTL 30 3.82 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 12 8449490 28302290 Rat 7411660 Foco28 Food consumption QTL 28 10.9 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 12 1 42110980 Rat
D12Rat37
Rat Assembly Chr Position (strand) Source JBrowse GRCr8 12 15,486,654 - 15,486,827 (+) Marker Load Pipeline mRatBN7.2 12 10,372,993 - 10,373,166 (+) MAPPER mRatBN7.2 Rnor_6.0 12 12,355,318 - 12,355,490 NCBI Rnor6.0 Rnor_5.0 12 14,407,326 - 14,407,498 UniSTS Rnor5.0 RGSC_v3.4 12 10,701,028 - 10,701,201 RGD RGSC3.4 RGSC_v3.4 12 10,701,029 - 10,701,201 UniSTS RGSC3.4 RGSC_v3.1 12 10,730,957 - 10,731,129 RGD Celera 12 12,172,750 - 12,172,922 UniSTS RH 3.4 Map 12 138.2 UniSTS RH 3.4 Map 12 138.2 RGD RH 2.0 Map 12 105.5 RGD FHH x ACI Map 12 0.0 RGD Cytogenetic Map 12 p11 UniSTS
D12Got14
Rat Assembly Chr Position (strand) Source JBrowse GRCr8 12 15,469,067 - 15,469,259 (+) Marker Load Pipeline mRatBN7.2 12 10,355,403 - 10,355,595 (+) MAPPER mRatBN7.2 Rnor_6.0 12 12,336,634 - 12,336,825 NCBI Rnor6.0 Rnor_5.0 12 14,389,278 - 14,389,469 UniSTS Rnor5.0 Celera 12 12,155,267 - 12,155,460 UniSTS RH 3.4 Map 12 128.6 RGD RH 3.4 Map 12 128.6 UniSTS RH 2.0 Map 12 108.0 RGD Cytogenetic Map 12 p11 UniSTS
RH128891
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 12 10,359,352 - 10,359,550 (+) MAPPER mRatBN7.2 Rnor_6.0 12 12,340,583 - 12,340,780 NCBI Rnor6.0 Rnor_5.0 12 14,393,227 - 14,393,424 UniSTS Rnor5.0 RGSC_v3.4 12 10,688,160 - 10,688,357 UniSTS RGSC3.4 Celera 12 12,159,228 - 12,159,425 UniSTS RH 3.4 Map 6 237.1 UniSTS Cytogenetic Map 12 p11 UniSTS
RH134396
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 12 10,358,026 - 10,358,239 (+) MAPPER mRatBN7.2 Rnor_6.0 12 12,339,257 - 12,339,469 NCBI Rnor6.0 Rnor_5.0 12 14,391,901 - 14,392,113 UniSTS Rnor5.0 RGSC_v3.4 12 10,686,834 - 10,687,046 UniSTS RGSC3.4 Celera 12 12,157,902 - 12,158,114 UniSTS RH 3.4 Map 12 141.4 UniSTS Cytogenetic Map 12 p11 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000001336 ⟹ ENSRNOP00000001336
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 12 10,341,011 - 10,349,693 (-) Ensembl Rnor_6.0 Ensembl 12 12,322,247 - 12,330,929 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000092249
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source Rnor_6.0 Ensembl 12 12,330,471 - 12,330,939 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000092432
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source Rnor_6.0 Ensembl 12 12,322,248 - 12,330,929 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000092487
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 12 10,341,011 - 10,364,735 (-) Ensembl Rnor_6.0 Ensembl 12 12,322,243 - 12,330,457 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000092576
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source Rnor_6.0 Ensembl 12 12,322,343 - 12,330,929 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000092687
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source Rnor_6.0 Ensembl 12 12,325,629 - 12,326,154 (-) Ensembl
RefSeq Acc Id:
NM_001009604 ⟹ NP_001009604
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 12 15,454,673 - 15,463,365 (-) NCBI mRatBN7.2 12 10,341,007 - 10,349,699 (-) NCBI Rnor_6.0 12 12,322,247 - 12,330,929 (-) NCBI Rnor_5.0 12 14,374,635 - 14,383,317 (-) NCBI RGSC_v3.4 12 10,670,023 - 10,678,698 (-) RGD Celera 12 12,141,016 - 12,149,572 (-) RGD
Sequence:
GCTGCCCGGGACACCGCCGTCGCTGCTACCGCCGCCATCCCCGCCGGGCCGAAGGAAGCGAGCCGGGCCGGAGCTGGCGGGCGCGCGGCCCCGGGGGCCGCGATGGACCACAAGCCCCTGTTGCAGGA
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RefSeq Acc Id:
NM_001393811 ⟹ NP_001380740
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 12 15,454,673 - 15,478,319 (-) NCBI mRatBN7.2 12 10,341,007 - 10,364,655 (-) NCBI
RefSeq Acc Id:
NP_001009604 ⟸ NM_001009604
- Peptide Label:
isoform 1
- UniProtKB:
Q5PPK1 (UniProtKB/Swiss-Prot)
- Sequence:
MDHKPLLQERPPAYNLEAGQGDYACGPHGYGAIPTAPPPPPYPYLVTGIPTSHPRVYNIHSRAVTRYPANSIVVVGGCPVCRVGVLEYCFTCLGIFLAIVLFPFGFLCCFALRKRRCPNCGAVFT
hide sequence
Ensembl Acc Id:
ENSRNOP00000001336 ⟸ ENSRNOT00000001336
RefSeq Acc Id:
NP_001380740 ⟸ NM_001393811
- Peptide Label:
isoform 2
- UniProtKB:
A0A8I6AW69 (UniProtKB/TrEMBL)
RGD ID: 13698430 Promoter ID: EPDNEW_R8950 Type: initiation region Name: Bri3_1 Description: brain protein I3 SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Experiment Methods: Single-end sequencing. Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 12 12,330,940 - 12,331,000 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2005-12-06
Bri3
brain protein I3
Bri3_predicted
brain protein I3 (predicted)
Symbol and Name updated
1559027 APPROVED
2005-01-12
Bri3_predicted
brain protein I3 (predicted)
Symbol and Name status set to approved
70820 APPROVED
