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Gene: Bnip2 (BCL2 interacting protein 2) Rattus norvegicus

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Symbol:

Bnip2

Name:

BCL2 interacting protein 2

RGD ID:

1308944

Description:

Involved in response to oxygen-glucose deprivation. Predicted to be located in cytosol; microtubule organizing center; and nucleus. Predicted to be active in cytoplasm. Orthologous to human BNIP2 (BCL2 interacting protein 2); PARTICIPATES IN p38 MAPK signaling pathway; INTERACTS WITH 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Bcl-2 and E1B 19 kDa interacting protein; BCL2/adenovirus E1B 19 kDa protein-interacting protein 2; BCL2/adenovirus E1B 19kDa-interacting protein 1, NIP2; BCL2/adenovirus E1B interacting protein 2; LOC300811

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	BNIP2 (BCL2 interacting protein 2)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, Panther
Mus musculus (house mouse):	Bnip2 (BCL2/adenovirus E1B interacting protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Bnip2 (BCL2 interacting protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	BNIP2 (BCL2 interacting protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	BNIP2 (BCL2 interacting protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Bnip2 (BCL2 interacting protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	BNIP2 (BCL2 interacting protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	BNIP2 (BCL2 interacting protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Bnip2 (BCL2 interacting protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Bnip2 (BCL2 interacting protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	ATL3 (atlastin GTPase 3)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	BNIP2 (BCL2 interacting protein 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Bnip2 (BCL2/adenovirus E1B interacting protein 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	bnip2 (BCL2 interacting protein 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG11593	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG11593	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	bnip2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	bnip2	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Related Pseudogenes:

Bnip3l-ps1

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	79,521,375 - 79,539,148 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	79,521,363 - 79,547,368 (+)	Ensembl				GRCr8
mRatBN7.2	8	70,640,436 - 70,661,782 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	70,640,445 - 70,675,590 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	76,173,901 - 76,187,300 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	74,446,914 - 74,460,313 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	72,285,585 - 72,298,985 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	8	80,339,314 - 80,352,714 (+)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	8	82,450,687 - 82,464,087 (+)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	8	80,914,645 - 80,928,045 (+)	NCBI		Lyon_Hypertensive
F344_StmMcwi	8	72,385,851 - 72,399,252 (+)	NCBI		F344_StmMcwi
Rnor_6.0	8	76,400,333 - 76,426,307 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	76,400,341 - 76,426,503 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	76,654,578 - 76,675,924 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	74,421,904 - 74,435,300 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	71,072,882 - 71,086,280 (-)	NCBI		Celera
RGSC_v3.1	8	74,423,835 - 74,458,781 (+)	NCBI
Cytogenetic Map	8	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane (EXP)

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dichloroethane (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (EXP,ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4,4'-trichlorobiphenyl (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

amitrole (EXP)

aristolochic acid A (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bexarotene (ISO)

bisphenol A (EXP,ISO)

Brevetoxin B (ISO)

caffeine (ISO)

capsaicin (ISO)

carbon nanotube (ISO)

casticin (ISO)

cobalt dichloride (ISO)

cocaine (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

deoxynivalenol (ISO)

dibutyl phthalate (EXP,ISO)

dicrotophos (ISO)

FR900359 (ISO)

fulvestrant (ISO)

hydroquinone O-beta-D-glucopyranoside (ISO)

ketoconazole (EXP)

leflunomide (ISO)

methimazole (EXP)

methylmercury chloride (ISO)

mifepristone (ISO)

Myrtucommulone A (ISO)

ochratoxin A (EXP)

p-menthan-3-ol (ISO)

paracetamol (ISO)

PCB138 (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

resveratrol (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

sunitinib (ISO)

thiram (ISO)

titanium dioxide (ISO)

triptonide (ISO)

valproic acid (ISO)

vancomycin (ISO)

VX nerve agent (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

apoptotic process (IBA)

blastocyst development (ISO)

centrosome cycle (ISO)

positive regulation of MAPK cascade (ISO)

positive regulation of neuron differentiation (ISO)

positive regulation of small GTPase mediated signal transduction (ISO)

response to oxygen-glucose deprivation (IEP)

striated muscle cell differentiation (ISO)

Cellular Component

centriole (IEA,ISO)

cytoplasm (IBA,IEA,ISO)

cytosol (IEA,ISO)

nuclear envelope (IEA,ISO)

spindle pole centrosome (IEA,ISO)

Molecular Function

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

p38 MAPK signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Differential expression of BNIP family members of BH3-only proteins during the development and after axotomy in the rat.	Cho B, etal., Mol Cells. 2012 Jun;33(6):605-10. doi: 10.1007/s10059-012-0051-0. Epub 2012 May 23.
2.	Mechanisms and functions of p38 MAPK signalling.	Cuadrado A and Nebreda AR, Biochem J. 2010 Aug 1;429(3):403-17. doi: 10.1042/BJ20100323.
3.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:7954800	PMID:19117032	PMID:19244314	PMID:20160094

Genomics

Comparative Map Data

Bnip2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	79,521,375 - 79,539,148 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	79,521,363 - 79,547,368 (+)	Ensembl				GRCr8
mRatBN7.2	8	70,640,436 - 70,661,782 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	70,640,445 - 70,675,590 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	76,173,901 - 76,187,300 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	74,446,914 - 74,460,313 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	72,285,585 - 72,298,985 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	8	80,339,314 - 80,352,714 (+)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	8	82,450,687 - 82,464,087 (+)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	8	80,914,645 - 80,928,045 (+)	NCBI		Lyon_Hypertensive
F344_StmMcwi	8	72,385,851 - 72,399,252 (+)	NCBI		F344_StmMcwi
Rnor_6.0	8	76,400,333 - 76,426,307 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	76,400,341 - 76,426,503 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	76,654,578 - 76,675,924 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	74,421,904 - 74,435,300 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	71,072,882 - 71,086,280 (-)	NCBI		Celera
RGSC_v3.1	8	74,423,835 - 74,458,781 (+)	NCBI
Cytogenetic Map	8	q24	NCBI

BNIP2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	59,659,146 - 59,689,320 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	59,659,146 - 59,689,350 (-)	Ensembl			hg38	GRCh38
GRCh37	15	59,951,345 - 59,981,519 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	57,742,356 - 57,768,778 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	15	57,742,355 - 57,768,778	NCBI
Celera	15	36,843,018 - 36,869,598 (-)	NCBI		Celera
Cytogenetic Map	15	q22.2	NCBI
HuRef	15	36,777,017 - 36,803,599 (-)	NCBI		HuRef
CHM1_1	15	60,073,017 - 60,099,603 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	15	57,460,850 - 57,491,038 (-)	NCBI		T2T-CHM13v2.0

Bnip2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	69,896,660 - 69,918,941 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	69,896,748 - 69,915,599 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	9	69,989,438 - 70,011,659 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	69,989,466 - 70,008,317 (+)	Ensembl			mm10	GRCm38
MGSCv37	9	69,837,308 - 69,856,124 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	9	69,788,665 - 69,807,481 (+)	NCBI		MGSCv36	mm8
Celera	9	67,205,929 - 67,224,771 (+)	NCBI		Celera
Cytogenetic Map	9	D	NCBI
cM Map	9	39.15	NCBI

Bnip2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955450	15,157,226 - 15,180,069 (+)	Ensembl
ChiLan1.0	NW_004955450	15,157,411 - 15,180,069 (+)	NCBI	ChiLan1.0	ChiLan1.0

BNIP2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	48,923,635 - 48,955,642 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	53,106,285 - 53,138,308 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	38,628,798 - 38,659,161 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	56,933,697 - 56,964,197 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	56,933,697 - 56,964,044 (-)	Ensembl			panPan2	panpan1.1

BNIP2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	24,522,397 - 24,546,968 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	30	24,503,092 - 24,539,440 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	24,496,442 - 24,520,540 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	24,691,322 - 24,715,441 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	24,691,419 - 24,715,417 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	24,616,981 - 24,641,089 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	24,699,414 - 24,723,513 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	24,886,730 - 24,910,833 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Bnip2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	102,807,285 - 102,827,361 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	20,652,601 - 20,675,325 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	20,655,415 - 20,675,351 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

BNIP2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	112,344,228 - 112,370,404 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	112,272,883 - 112,370,404 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	124,261,168 - 124,283,937 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

BNIP2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	23,821,350 - 23,846,130 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	23,821,499 - 23,855,741 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666048	117,479,543 - 117,507,302 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Bnip2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624781	12,468,711 - 12,488,360 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624781	12,468,675 - 12,497,130 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Bnip2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	8	64,333,782 - 64,354,828 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Bnip2
191 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	40
Count of miRNA genes:	33
Interacting mature miRNAs:	40
Transcripts:	ENSRNOT00000064312
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1298065	Scl16	Serum cholesterol level QTL 16	3.8		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	8	39752803	84752803	Rat
1554321	Bmd3	Bone mineral density QTL 3	7.9	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	49849908	118871671	Rat
1578769	Uae31	Urinary albumin excretion QTL 31	3.3	0.001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	39106363	103375781	Rat
1298079	Activ2	Activity QTL 2	9.5	0.000001	voluntary movement trait (VT:0003491)	rearing measurement (CMO:0001515)	8	50763951	95763951	Rat
11556286	Cm81	Cardiac mass QTL 81		0.01	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	39106258	84106258	Rat
70161	Bp62	Blood pressure QTL 62	2.9	0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	51589699	99045312	Rat
1578765	Klgr1	Kidney lesion grade QTL 1	3.3	0.0001	kidney morphology trait (VT:0002135)	organ lesion measurement (CMO:0000677)	8	39106363	103375781	Rat
61464	Niddm11	Non-insulin dependent diabetes mellitus QTL 11	3.1	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	8	44477926	89477926	Rat
4889938	Bss89	Bone structure and strength QTL 89	3.8		tibia size trait (VT:0100001)	tibia cortical bone volume (CMO:0001725)	8	58991697	91341052	Rat
1578755	Pur5	Proteinuria QTL 5	3.3	0.0001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	8	39106258	103375958	Rat
2313088	Bss75	Bone structure and strength QTL 75	3.1	0.0001	body length (VT:0001256)	body length, nose to rump (CMO:0000079)	8	39106258	91341052	Rat
631210	Bw3	Body weight QTL3	5.9		mesenteric fat pad mass (VT:0010427)	mesenteric fat pad weight to body weight ratio (CMO:0000654)	8	61019838	121662124	Rat
8662823	Vetf5	Vascular elastic tissue fragility QTL 5	1.9		artery integrity trait (VT:0010639)	patent ductus arteriosus score (CMO:0002566)	8	63404444	108404444	Rat
1358896	Bp262	Blood pressure QTL 262	2.89		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	35464071	107982864	Rat
731182	Uae24	Urinary albumin excretion QTL 24	6.4		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	47541419	92541419	Rat
61353	Bp35	Blood pressure QTL 35		0.001	arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	8	39106258	84106258	Rat
1359033	Bp273	Blood pressure QTL 273			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	39106258	84106258	Rat
1331769	Rf39	Renal function QTL 39	3.871		urine output (VT:0003620)	timed urine volume (CMO:0000260)	8	50763951	107970527	Rat
61358	Bp39	Blood pressure QTL 39	2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	44447837	89447837	Rat
1358906	Bp253	Blood pressure QTL 253	4	0.0004	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	49610204	94610204	Rat
1358907	Cm40	Cardiac mass QTL 40	1.89		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	35464071	107982864	Rat
70197	BpQTLcluster8	Blood pressure QTL cluster 8	3.482		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	55428333	127966348	Rat
2316950	Scl66	Serum cholesterol level QTL 66	4.1		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	8	39106363	114525825	Rat
1582254	Kidm31	Kidney mass QTL 31	3		kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	8	49245178	94245178	Rat
724540	Uae8	Urinary albumin excretion QTL 8	5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	8	39106258	103375958	Rat
10402857	Bp380	Blood pressure QTL 380		0.95	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	62848139	107848139	Rat
1358892	Kidm26	Kidney mass QTL 26	3.69		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	8	35464071	107982864	Rat
1582243	Bw66	Body weight QTL 66	3.4	0.0048	body mass (VT:0001259)	body weight (CMO:0000012)	8	49245178	94245178	Rat
5684973	Bss100	Bone structure and strength QTL 100	4.7		tibia area (VT:1000281)	tibia area measurement (CMO:0001382)	8	58991697	91341052	Rat
61373	Mcs4	Mammary carcinoma susceptibility QTL 4	1.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	8	44475043	89475043	Rat
2313057	Bss76	Bone structure and strength QTL 76	3	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	8	39106258	91341052	Rat
12879878	Bw183	Body weight QTL 183		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	8	62848139	107848139	Rat
1300177	Cm2	Cardiac mass QTL 2	3.65		heart mass (VT:0007028)	heart weight (CMO:0000017)	8	63141536	109261840	Rat
1549908	Neudeg1	Neurodegradation QTL 1	5.5	0	nervous system integrity trait (VT:0010566)	logarithm of the ratio of the lesioned side motor neuron count to contralateral side motor neuron count (CMO:0001986)	8	58337123	103337123	Rat
12879879	Cm99	Cardiac mass QTL 99		0.001	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	62848139	107848139	Rat
2313067	Bss77	Bone structure and strength QTL 77	3.1	0.0001	tibia size trait (VT:0100001)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	8	39106258	91341052	Rat
1331804	Cm30	Cardiac mass QTL 30	3.77443		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	8	62970527	107970527	Rat
12879880	Cm100	Cardiac mass QTL 100		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	8	62848139	107848139	Rat
12879881	Cm101	Cardiac mass QTL 101		0.001	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	8	62848139	107848139	Rat
12879882	Am8	Aortic mass QTL 8		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	8	62848139	107848139	Rat
12879883	Kidm65	Kidney mass QTL 65		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	8	62848139	107848139	Rat
71120	Niddm21	Non-insulin dependent diabetes mellitus QTL 21	3.73		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	8	66992095	111992095	Rat
1358912	Bw51	Body weight QTL 51	2.95		body mass (VT:0001259)	body weight (CMO:0000012)	8	60248093	105248093	Rat
1300171	Bp184	Blood pressure QTL 184	3.66		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	8	79394435	132782436	Rat
2313086	Bss60	Bone structure and strength QTL 60	4.1	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	8	58991697	91341052	Rat
2293697	Bmd39	Bone mineral density QTL 39			femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	8	62848139	107848139	Rat
1331837	Bw23	Body weight QTL 23	4.19	0.00007	body mass (VT:0001259)	body weight (CMO:0000012)	8	55428416	107963099	Rat
1331838	Niddm61	Non-insulin dependent diabetes mellitus QTL 61	3.53	0.0004	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	8	62963099	107963099	Rat
631650	Stl6	Serum triglyceride level QTL 6	4	0.0019	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	8	70041301	121080908	Rat
1581557	Eae16	Experimental allergic encephalomyelitis QTL 16	3.8		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	8	68690349	119799881	Rat
2313046	Bss78	Bone structure and strength QTL 78	3.5	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	8	39106258	91341052	Rat
2301402	Bp316	Blood pressure QTL 316		0.005	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	62848139	107848139	Rat
631664	Hcar3	Hepatocarcinoma resistance QTL 3	2.9	0.0005	liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	8	62982864	107982864	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001106835	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436461	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436462	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006243370	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006243371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AY489562	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474041	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ234612	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000081072 ⟹ ENSRNOP00000070548

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	79,521,363 - 79,539,146 (+)	Ensembl
mRatBN7.2 Ensembl	8	70,640,455 - 70,658,240 (+)	Ensembl
Rnor_6.0 Ensembl	8	76,400,373 - 76,413,769 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000087382 ⟹ ENSRNOP00000071923

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	79,521,363 - 79,547,368 (+)	Ensembl
mRatBN7.2 Ensembl	8	70,640,445 - 70,675,590 (+)	Ensembl
Rnor_6.0 Ensembl	8	76,400,341 - 76,426,503 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000102436 ⟹ ENSRNOP00000096973

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	79,521,377 - 79,539,146 (+)	Ensembl
mRatBN7.2 Ensembl	8	70,640,496 - 70,658,234 (+)	Ensembl

RefSeq Acc Id:

NM_001106835 ⟹ NP_001100305

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	79,521,375 - 79,534,771 (+)	NCBI
mRatBN7.2	8	70,640,467 - 70,653,863 (+)	NCBI
Dahl_SR_JrHsd	8	80,339,314 - 80,352,714 (+)	NCBI
Lyon_Normotensive	8	82,450,687 - 82,464,087 (+)	NCBI
Lyon_Hypertensive	8	80,914,645 - 80,928,045 (+)	NCBI
F344_StmMcwi	8	72,385,851 - 72,399,252 (+)	NCBI
Rnor_6.0	8	76,400,373 - 76,413,769 (+)	NCBI
Rnor_5.0	8	76,654,578 - 76,675,924 (-)	NCBI
RGSC_v3.4	8	74,421,904 - 74,435,300 (+)	RGD
Celera	8	71,072,882 - 71,086,280 (-)	RGD

Sequence:

show sequence

TCACTGAATCCGGGTCAGCTGCTGCCTCCGGGACTGCAGCTGAGACCGTCCGGGAAAAGCTGGG
CCCCGTCTCCACAGCCGACCAAGGGCAGCGGGCTCTGCCCGGCGCCACTTTCTGCGACCTGGCC
GTCAGCCCCACGTCGCCGGCCTGGAGGGGCAAAGAGGACGAGGGGGCCGCGGCTTCCTCCGGGG
ACCTCGGCTGCCTGGATTGCCAGGAGCTGGAAGTTGACATTGAGTCTAGGCTGAGGATGGAAGG
TGTGGAACTGAAAGAAGAATGGCAGGATGAAGACTTCCCAATACCTTTACCAGAAGATGACAGC
ATTGAAGCAGATATACTAGATGTAACTGATCCAGACAGACAGCCTGGCTCGTTAGAAGTTAATG
GAAACAAAGTACGGAAGAAACTGGTGGCCCCAGACATCAGCCTGACCTTGGATCCTGGTGAAGA
CTCTCTGTGGTCAGATGATTTGGATGAAGGTGGAGAAGTTGACCTGGATGGCTTAGACACCCCC
TCAGAGAACAGTGATGAGTTTGAGTGGGAAGATGATCTTCCCAAACCCAAAACTACTGAAGTCA
TTAGGAAAGGCTCAATTACTGAATATGCAGCTACAGAAGAAAAGGAAGATGGACGCCGCTGGCG
CATGTTCAGGATTGGAGAGCAGGACCATAGAGTGGACATGAAGGCAATCGAACCCTACAAAAAA
GTTATTAGCCATGGAGGCTATTATGGGGATGGCTTAAATGCCATTGTTGTATTTGCTGTCTGTT
TCATGCCTGAGAGTGGTCAGCCTAACTATAGATATTTGATGGACAATCTCTTTAAATATGTTAT
TGGCACTTTAGAGCTGTTGGTAGCAGAGAACTACATGATCATTTACTTAAATGGTGCGACAACG
CGAAGGAAAATGCCCAGTCTGGGATGGCTCAGGAGATGCTACCAGCAAATCGACAGACGATTAA
GGAAAAACCTAAAGTCTCTAATCATTGTGCACCCCTCTTGGTTTATCCGAACACTTCTGGCTGT
TACAAGACCATTTATCAGTTCAAAATTCAGTCAGAAGATTAGATACGTCTTTAATTTGGCTGAA
CTGGCGGAGCTTGTTCCCATGGAGTACGTCGGCATACCAGAGTGCATCAAACAGTGCGTCTCCC
TCCTTTGTTTCTCTTCCTGGATCTGGGCAAGAGGGCTGCTTCTCTGTCTCACTGTGCTCAAGAA
CACAGGGCTGTAAGGAAGAGGTAGAGGAGGAACCTGTTTGTCCCACAGCCTTCCCTCACAGCTT
CCCCTTGCAGCACCAGGTTTGCATAACCGGAGGGGACTGTGCTCATGAGTCCTTCTGTACCTTA
CGTGCTGTTTAAGTCTGAGAGATGACGTCCTGAGGAGGCAGTCCTGTAGAGTCGCTTCTCTACT
TGACATGTTACTCTCACGAGTTTATCGTGTTACTGTGTTACTGAAGGAACTCCTATTGCTAAAG
AAACAAGTTGTTGTTTAAAGCAGCCTGGTCTTAATATTTTCC

hide sequence

RefSeq Acc Id:

XM_006243370 ⟹ XP_006243432

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	79,521,430 - 79,539,148 (+)	NCBI
mRatBN7.2	8	70,640,437 - 70,661,782 (+)	NCBI
Rnor_6.0	8	76,400,333 - 76,426,307 (+)	NCBI
Rnor_5.0	8	76,654,578 - 76,675,924 (-)	NCBI

Sequence:

show sequence

CGGCGCCGGTCCGGAGGTGGTCACTTCCGCCGCGGCGTGCTCACTGAATCCGGGTCAGCTGCTG
CCTCCGGGACTGCAGCTGAGACCGTCCGGGAAAAGCTGGGCCCCGTCTCCACAGCCGACCAAGG
GCAGCGGGCTCTGCCCGGCGCCACTTTCTGCGACCTGGCCGTCAGCCCCACGTCGCCGGCCTGG
AGGGGCAAAGAGGACGAGGGGGCCGCGGCTTCCTCCGGGGACCTCGGCTGCCTGGATTGCCAGG
AGCTGGAAGTTGACATTGAGTCTAGGCTGAGGATGGAAGGTGTGGAACTGAAAGAAGAATGGCA
GGATGAAGACTTCCCAATACCTTTACCAGAAGATGACAGCATTGAAGCAGATATACTAGATGTA
ACTGATCCAGACAGACAGCCTGGCTCGTTAGAAGTTAATGGAAACAAAGTACGGAAGAAACTGG
TGGCCCCAGACATCAGCCTGACCTTGGATCCTGGTGAAGACTCTCTGTGGTCAGATGATTTGGA
TGAAGGTGGAGAAGTTGACCTGGATGGCTTAGACACCCCCTCAGAGAACAGTGATGAGTTTGAG
TGGGAAGATGATCTTCCCAAACCCAAAACTACTGAAGTCATTAGGAAAGGCTCAATTACTGAAT
ATGCAGCTACAGAAGAAAAGGAAGATGGACGCCGCTGGCGCATGTTCAGGATTGGAGAGCAGGA
CCATAGAGTGGACATGAAGGCAATCGAACCCTACAAAAAAGTTATTAGCCATGGAGGCTATTAT
GGGGATGGCTTAAATGCCATTGTTGTATTTGCTGTCTGTTTCATGCCTGAGAGTGGTCAGCCTA
ACTATAGATATTTGATGGACAATCTCTTTAAATATGTTATTGGCACTTTAGAGCTGTTGGTAGC
AGAGAACTACATGATCATTTACTTAAATGGTGCGACAACGCGAAGGAAAATGCCCAGTCTGGGA
TGGCTCAGGAGATGCTACCAGCAAATCGACAGACGATTAAGGAAAAACCTAAAGTCTCTAATCA
TTGTGCACCCCTCTTGGTTTATCCGAACACTTCTGGCTGTTACAAGACCATTTATCAGTTCAAA
ATTCAGTCAGAAGATTAGATACGTCTTTAATTTGGCTGAACTGGCGGAGCTTGTTCCCATGGAG
TACGTCGGCATACCAGAGTGCATCAAACAGTATGAAGAAGAAAAGTTTAAAAAGAGACAAAAAA
GAGTTGATCAAGAGCTTAATGGGAAACAGGAACCACCAAAGAGTGAGCAGTAAGTTCCGCATCC
ATCCCGGAGGAGGCAGAGCACCGGGGGCAGGGCTGTAGTGCATCCTAGTGCACTGCTGGCTCAA
GGGTTTATGTCATCTGTTACAAAATTTACTTGACTTCTTTCCAAATGAACTCTTGTACAAGGGA
CTGTTCACTGCTGTCATGGTTTGCAACTGTTGAATTTAGCTCTTTAATAACTAATTATATTGTA
ATCGTTTTATATTGCTAAATAGCAAAAACTACACTTTATATAAAACAATTTTTACATTTGTTTA
TTTGAAATGATGCATCTTCAGTAAAGTATTTATATACATAAATGACAAAGGAAAGAAATAATAT
ATATTTTTATGTTTGGGGGCAATATTTTTTAGTGTGTACCTATCTCGTGGATGAATATGTACAA
GTAAATAAGACCACGATTTTAAGTGTAAAGTGCATGTAAGACTTTGTTTTTGTAAATGGTTGGA
TACATTTCCTGGGTAACTTAGGCTGGGTTGTCCTAAAGCAGGGGCAGGTAAATTGACGCCAAGA
AGTACCTAAGGTCATGCATGTGGTCTGGGCAGTAGCAGCAGCCTGAGCTTCTCCTCACCTGAAA
GCACGTTGTATCTTAATGTGGTGGAAAGGCAGGTGGGTGAATGACTTGTTTTCCTCTCTGAAGA
CATGTTGGAACTAGAACTAGAGATTTTGAAAAGCTAGTAGTTAGGGTTTATTATATATTTGTAT
ATAAGGGACACTGTACTTTACCCAAAGTCAGAACTGTTCTAAGAAGAAAGCAAGCTCTTAAGAT
GTGTTCAGTCACGTGAGCTGAGTGGTGTCGTGTGTGTGAAGCTGTGAGGTGTGCAGAGGCTTCG
ATGAGCATTCATGGTCAGCTGCATCTGTAGAGCAGATGGCGCTATGGCATGCTCTCACAGTGGG
GCACTTTACCAGAGTACGTCCTCGCCGGCTGTCCGACCACAGTGGTATTTGGCCTCAGCAGATG
GGCGTTCTCGCTGCTGTCGGATGGTGTGACAGTGCTGTCCATGGGTCAGTTCTGTAAGTGCTGA
GGTGCTACTGCTGTGCACCCGGGATGCCATTTGCTGTATGTAAGCCTTTAGCTCATGTGGTTAA
GTACCTTGACTGAACGTTGAAATAAATATTATTTGTGCCTCCAACCAGGGTCTAAAAGTCATTC
TAAAACAACAGATTTGTCTAGTCTTGTGTCATGGACTTGCCTGGTGTATGTATGTTTAGTGCAC
TATCAGCTTCACGACCCCCAGCCCGTCATGTAAATTGTTTACAGAAGTGATCCAGCAAAATAAC
ATTGAACAGGCGTAAACTAAGCTTAGGTTATTTCCTCCCACACTGAGCACATGACCTTCACCAT
TGCAGTTTTTAGGGTTAAGCTTCTATTGCAATAGGGAATTTTTCTTTATTTCTTTGTCCTTCTT
GGACATAAATTTGACCTACTAGATTAAAACCAGTTATGGTCAAGCTGGAGGACTTTGTGGATAA
AACATTTCTCCACAACCTCAGCCTAGATCCAGGACTCGTGTTGTTGCAGTGCATTGAGCCAAAA
CCATTTTGCTTGTGTTGATGAAGGAAACTTTGAGAATAACTATATAACACCAGGCATGGTGGCA
TGAATTTAAGGGCAGCCTGGCCTACATAGCTGCATAGACAACCTTCTGAACTTACCCAAGAGTC
GCGAGTAGCTTGTAGATACAGTGGCTTACAGAGCCTCTCACCTACCTTGTCTCAGAATGGACTG
AGCTTTGTCTTTGGTTTTCTTCCACATTAAATACTAAGATCATCAGTTTCAAAATACAGACGAT
AGCCTCAGCTTTTTACTGTGTTTTACTTTTTGCAGAAATGGTTGGTTTGGGGTTTTTTGTTTGT
TTTGGGTCTTTTTAAAAATTAAAAGTAGCCTATATTCAGTTAGAACATGGAGAGCTGGCTCAAC
AGTTGTAAGAACACTTCCAAGTTTAGTTCCCAGCACCAATGGCCAGCAGCAGCTCACGGCTGCC
TTTAATTCCAGCTCCAGGGGATTTGCTTCAGTCTCTGGCCTCTGGGCATCTGCATACACATGCA
CACATACACAGAATCTTTTTTTAAAAATGAATAAAATTCACAAGGAACAGCTTAATATAATATA
TACCTTCTTGCCTAGGGAGTCTGAAACAGAATTCTAAGTTGGGGCCTATCTGGGCTACATAGCA
AGCCCTTGACTGAAGAAGAAGGAGAACAGTGCTTTAACTGCACTTGAATGAATGTGGTATAGAG
ATGTGCCCACAGTAAATGTAAACATACCTGTACAGCTGGTGATAAATAGTAGGTTAGAGGAAAA
GCCATATTAAGTTGATATTTAATTGGTACAATATAACTTTTTCCCATGTCATATTTTAATTTTC
ATGATTAACTGAGATGAAAATGCATAGAGTAATTCTTTGACTTTTTTTAATTCTTTTGACTTTT
TTTGCAGGAGTCTTAGCTAAATTTGACAGGTTTAATTCAGGTTTAATTCAGGTTTTTGTTACCA
TCTCTGTTACTTTGGCTCTGACTGCCCTCTTTTTATCAAGTTTTTCTTAGAAAATAATGTAACT
CTGTTCTGCTTGTGTTCCTGAAAAAGCACCAAGGGAAGCTGTGAGGTTTCCACCTCACATTGAA
GCCTTTAACCAGGGGCAAGAGGGGCCAGGAAGTGTGGTGCTAAGCAGAGTTAGAAGATAAGTGA
GAAAATGGGCCATTAAAAAGGCTTGGTTATCACCTACATGCTCTCTTAAGGAACGTACTCTGTA
TAGCTGCCGGTGGTTTCATTTCCCATTTCCATACAGAAACAGATGTAAGGCATGGATTGACGAG
GGAACTGCTGGTAGCCCTGGGATGATACTCTCCTGTCCTTTGCATCTTCAGGCAGAAACAGGTC
TGAACAATGGCGTAGCAGCTACAGTCTCCATGTCAAGACCAATCCCACCCTTCACAGTTGGTAA
CGTTAATGTTGGCTTCTGTGCTACCTGTCATGACTTAAGTGTCACCAGCTCCTTGACAGTATTC
TTCCAGAGAACTTGTGTCATGTTCCTGCAGCCATGTATGTGAGTGCTCAGGGAACTTGAAGAGA
TAATCTCATGAAGTGTGCTGGGAATTAGCACTGTGACACATGTAGCAGAGCAGGCCAGTTTCTT
GATGGAATTGGTAGGTCTCTATGAAAGGTGACAGTAGCTTTGGCATTCTTTGTCCCGTGTTTTA
AGTAGAGAATTGTTGCTGGAAGATAGTGGTGCACACTCTTTATCCCAGCACTTTGGAGGCAGAG
GCAGGCTGATCTCTGAATTCTACAGACTGAGTTCCAAGACAGCCAGAGAAACCCTGTCTCAAAA
TGTAGAAAAATTGTTAACACTGTTAGAGACACAGATAGTTGACAATAGAGGTAGTCACCCCATT
CTGCTTTGGTTTTGTTCTGCTGCCTCCCCTCCCTCCCCTCACCCCTGTTTTCCTTTGGTATTTT
AGACATTGATCAGTCATATCTCAGAGGGCTGGAATAAGAAAAATCTATACACAGGTGAACACTT
GTACTAGTGAGAGTTTACTTTGTACTAGAAAATGGGAATTGGGTAGTGGGCCTTGCTAAGACCA
TCAAGAAACTAGGTTTAAGCTGTGTTCTAAGCTGGTACAAATGACCTGTCAGAGGACCCCTTTA
CCTTCAGCTCCCCTTCTGAGATCCTAAATTCTGAATTCAGAATCAGGATGGCAGAAGACAGTAA
TGGAGCTTTTAAGTTCTTAATGGTAATTGAAACAAAACAGGATGTGAAACAGTAAGAGGTAACT
TTAATTTGAATAGGGCAGTTTGTTGCTATTATATATAATATGTAATGGTGTGGAACCAAATTTA
AAATACTTTGAGAAATTCACATAGAACATTTTAGGATCAAGCACCAGGTGAAAACCAATCATTT
TAGGACCTACCATGGTCATGTACATGTGATTCCAACACTGGAGGCTAAGGCAGAAGGATTAGGA
GTTGGGGGCCAGTCTGGATTACTTAGCAAGTTCAGGACAACCTAAGCGGGTGTACAGAGTGAAA
CCTGCCCTGGGTTTGGGGGTGGGGTGGGGTGGGCGTGATGGTGGAGTAACACATTGCATTAAAA
TTAGTTTTAAAATGATAAAAGCTATTTCAGATAACTGCCTTAAATTTCCTACAATAATTAAAAC
TTGGAATTCGAAGTTTTTGTGTATTTGTATACTCCATCCTACCTTCGTATATAGACTTCCAAAG
GTTAATGTCCTAACAGCCGCTACAATGTTTACTCATGAAAACCCAGCTAGTAAATATTGGTGTT
CAGGGCTGCCAGCTTGCCCAGTCCTTGGGGTTCTGTTCACATAGAACACAATTCGGAGTTGATC
AAACACTGTTGCACTTTGCTTCATACTTCAAAACAACTTTCATTAGGAGCTCACATGCTGTCAC
TTAGACAAAATTAACTCACTGTGACCTTTTTGCTGTTCTTACATAGTACTGACTCTAGTGTTGT
CATTTCAGTGAGAATTCAGTCTGTCTGTCTTCGGGAAACGGCTCTAGTTCTAGGCAGTGAGAAG
CAGCTCTTTAGCATCCGCAAAGTGTGCTATTTTCTCTTCCTTTGACTTGTTCGGAATACAGTGG
TGTGTCCTCATTTGTTACACGTATTACCATAATATTAATGCATCTTAATAAATCAGTTGGAATA
TACATTTGTGCCTTGTTTTCATCTTTAATTGTTAACTTTTTATACTGAATTACCTGATGAAGCT
TTCAAGTATCAGGCCTTTACAACCCTGCAGTGTGGACCCTTCTGGTTCTTTTGATAACGAGGTC
AACCTGTTGAAAATCTTAACACTATTTGAACTTTAATCAGATTTGTATTCCATAGTTTCAAATT
GTTTAACTAGTTTGTATTGCAAGGATATGATTTTAAAAGGGGAAACCTACAGCATGGCACGAAG
GAGAACATGTTTAATTCCCAGACCTCGGGTGTTTGCACTGACTCCAAAGTCACAATTCATGTAC
TCAATTGGCCATTTGTAGTGCCTATAGCTGCTGTTTTGAAAGCAGAAAACCAAGTGCCCGGGCT
AATATGGAAAAGAATCTGAAATTCTGGAAAGTAAGAATATCCACGTATTTGCTTTTGTATTGGG
CACAAAGTTTATGCAGCAGATCTTCCAAGTAAAAAGGATTAATGAGTCACAAACCTCTCACTGC
ACTACACTGCAGCCACAAATTTTGACAAGCACCTCACGGGACTCTGCTTCCTCAGCGCCAGTGG
GAGAGACCACGCCCCTTCTCGGAAACTGAGGTGGGGGCGGGCGGTGGCTCCTGTGGCGTCACCT
CCGGGCTGCGCGAGCACTTCCGGGTCACTGGCACAGGGCTGCGGTTTCCGCGGCTGAGGTGGTC
GCAGCGGGCTCCCTACCTGGCTCTGCTACCGCCGCGGCGGAAGCGCCTTCCCTCAGGACATCAA
TGCAAGCCTGAA

hide sequence

RefSeq Acc Id:

XM_006243371 ⟹ XP_006243433

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	79,521,430 - 79,539,148 (+)	NCBI
mRatBN7.2	8	70,640,436 - 70,661,782 (+)	NCBI
Rnor_6.0	8	76,400,334 - 76,426,307 (+)	NCBI
Rnor_5.0	8	76,654,578 - 76,675,924 (-)	NCBI

Sequence:

show sequence

GGCGCCGGTCCGGAGGTGGTCACTTCCGCCGCGGCGTGCTCACTGAATCCGGGTCAGCTGCTGC
CTCCGGGACTGCAGCTGAGACCGTCCGGGAAAAGCTGGGCCCCGTCTCCACAGCCGACCAAGGG
CAGCGGGCTCTGCCCGGCGCCACTTTCTGCGACCTGGCCGTCAGCCCCACGTCGCCGGCCTGGA
GGGGCAAAGAGGACGAGGGGGCCGCGGCTTCCTCCGGGGACCTCGGCTGCCTGGATTGCCAGGA
GCTGGAAGTTGACATTGAGTCTAGGCTGAGGATGGAAGGTGTGGAACTGAAAGAAGAATGGCAG
GATGAAGACTTCCCAATACCTTTACCAGAAGATGACAGCATTGAAGCAGATATACTAGATGTAA
CTGATCCAGACAGACAGCCTGGCTCGTTAGAAGTTAATGGAAACAAAGTACGGAAGAAACTGGT
GGCCCCAGACATCAGCCTGACCTTGGATCCTGGTGAAGACTCTCTGTGGTCAGATGATTTGGAT
GAAGGTGGAGAAGTTGACCTGGATGGCTTAGACACCCCCTCAGAGAACAGTGATGAGTTTGAGT
GGGAAGATGATCTTCCCAAACCCAAAACTACTGAAGTCATTAGGAAAGGCTCAATTACTGAATA
TGCAGCTACAGAAGAAAAGGAAGATGGACGCCGCTGGCGCATGTTCAGGATTGGAGAGCAGGAC
CATAGAGTGGACATGAAGGCAATCGAACCCTACAAAAAAGTTATTAGCCATGGAGGCTATTATG
GGGATGGCTTAAATGCCATTGTTGTATTTGCTGTCTGTTTCATGCCTGAGAGTGGTCAGCCTAA
CTATAGATATTTGATGGACAATCTCTTTAAATATGTTATTGGCACTTTAGAGCTGTTGGTAGCA
GAGAACTACATGATCATTTACTTAAATGGTGCGACAACGCGAAGGAAAATGCCCAGTCTGGGAT
GGCTCAGGAGATGCTACCAGCAAATCGACAGACGATTAAGGAAAAACCTAAAGTCTCTAATCAT
TGTGCACCCCTCTTGGTTTATCCGAACACTTCTGGCTGTTACAAGACCATTTATCAGTTCAAAA
TTCAGTCAGAAGATTAGATACGTCTTTAATTTGGCTGAACTGGCGGAGCTTGTTCCCATGGAGT
ACGTCGGCATACCAGAGTGCATCAAACAAGTTGATCAAGAGCTTAATGGGAAACAGGAACCACC
AAAGAGTGAGCAGTAAGTTCCGCATCCATCCCGGAGGAGGCAGAGCACCGGGGGCAGGGCTGTA
GTGCATCCTAGTGCACTGCTGGCTCAAGGGTTTATGTCATCTGTTACAAAATTTACTTGACTTC
TTTCCAAATGAACTCTTGTACAAGGGACTGTTCACTGCTGTCATGGTTTGCAACTGTTGAATTT
AGCTCTTTAATAACTAATTATATTGTAATCGTTTTATATTGCTAAATAGCAAAAACTACACTTT
ATATAAAACAATTTTTACATTTGTTTATTTGAAATGATGCATCTTCAGTAAAGTATTTATATAC
ATAAATGACAAAGGAAAGAAATAATATATATTTTTATGTTTGGGGGCAATATTTTTTAGTGTGT
ACCTATCTCGTGGATGAATATGTACAAGTAAATAAGACCACGATTTTAAGTGTAAAGTGCATGT
AAGACTTTGTTTTTGTAAATGGTTGGATACATTTCCTGGGTAACTTAGGCTGGGTTGTCCTAAA
GCAGGGGCAGGTAAATTGACGCCAAGAAGTACCTAAGGTCATGCATGTGGTCTGGGCAGTAGCA
GCAGCCTGAGCTTCTCCTCACCTGAAAGCACGTTGTATCTTAATGTGGTGGAAAGGCAGGTGGG
TGAATGACTTGTTTTCCTCTCTGAAGACATGTTGGAACTAGAACTAGAGATTTTGAAAAGCTAG
TAGTTAGGGTTTATTATATATTTGTATATAAGGGACACTGTACTTTACCCAAAGTCAGAACTGT
TCTAAGAAGAAAGCAAGCTCTTAAGATGTGTTCAGTCACGTGAGCTGAGTGGTGTCGTGTGTGT
GAAGCTGTGAGGTGTGCAGAGGCTTCGATGAGCATTCATGGTCAGCTGCATCTGTAGAGCAGAT
GGCGCTATGGCATGCTCTCACAGTGGGGCACTTTACCAGAGTACGTCCTCGCCGGCTGTCCGAC
CACAGTGGTATTTGGCCTCAGCAGATGGGCGTTCTCGCTGCTGTCGGATGGTGTGACAGTGCTG
TCCATGGGTCAGTTCTGTAAGTGCTGAGGTGCTACTGCTGTGCACCCGGGATGCCATTTGCTGT
ATGTAAGCCTTTAGCTCATGTGGTTAAGTACCTTGACTGAACGTTGAAATAAATATTATTTGTG
CCTCCAACCAGGGTCTAAAAGTCATTCTAAAACAACAGATTTGTCTAGTCTTGTGTCATGGACT
TGCCTGGTGTATGTATGTTTAGTGCACTATCAGCTTCACGACCCCCAGCCCGTCATGTAAATTG
TTTACAGAAGTGATCCAGCAAAATAACATTGAACAGGCGTAAACTAAGCTTAGGTTATTTCCTC
CCACACTGAGCACATGACCTTCACCATTGCAGTTTTTAGGGTTAAGCTTCTATTGCAATAGGGA
ATTTTTCTTTATTTCTTTGTCCTTCTTGGACATAAATTTGACCTACTAGATTAAAACCAGTTAT
GGTCAAGCTGGAGGACTTTGTGGATAAAACATTTCTCCACAACCTCAGCCTAGATCCAGGACTC
GTGTTGTTGCAGTGCATTGAGCCAAAACCATTTTGCTTGTGTTGATGAAGGAAACTTTGAGAAT
AACTATATAACACCAGGCATGGTGGCATGAATTTAAGGGCAGCCTGGCCTACATAGCTGCATAG
ACAACCTTCTGAACTTACCCAAGAGTCGCGAGTAGCTTGTAGATACAGTGGCTTACAGAGCCTC
TCACCTACCTTGTCTCAGAATGGACTGAGCTTTGTCTTTGGTTTTCTTCCACATTAAATACTAA
GATCATCAGTTTCAAAATACAGACGATAGCCTCAGCTTTTTACTGTGTTTTACTTTTTGCAGAA
ATGGTTGGTTTGGGGTTTTTTGTTTGTTTTGGGTCTTTTTAAAAATTAAAAGTAGCCTATATTC
AGTTAGAACATGGAGAGCTGGCTCAACAGTTGTAAGAACACTTCCAAGTTTAGTTCCCAGCACC
AATGGCCAGCAGCAGCTCACGGCTGCCTTTAATTCCAGCTCCAGGGGATTTGCTTCAGTCTCTG
GCCTCTGGGCATCTGCATACACATGCACACATACACAGAATCTTTTTTTAAAAATGAATAAAAT
TCACAAGGAACAGCTTAATATAATATATACCTTCTTGCCTAGGGAGTCTGAAACAGAATTCTAA
GTTGGGGCCTATCTGGGCTACATAGCAAGCCCTTGACTGAAGAAGAAGGAGAACAGTGCTTTAA
CTGCACTTGAATGAATGTGGTATAGAGATGTGCCCACAGTAAATGTAAACATACCTGTACAGCT
GGTGATAAATAGTAGGTTAGAGGAAAAGCCATATTAAGTTGATATTTAATTGGTACAATATAAC
TTTTTCCCATGTCATATTTTAATTTTCATGATTAACTGAGATGAAAATGCATAGAGTAATTCTT
TGACTTTTTTTAATTCTTTTGACTTTTTTTGCAGGAGTCTTAGCTAAATTTGACAGGTTTAATT
CAGGTTTAATTCAGGTTTTTGTTACCATCTCTGTTACTTTGGCTCTGACTGCCCTCTTTTTATC
AAGTTTTTCTTAGAAAATAATGTAACTCTGTTCTGCTTGTGTTCCTGAAAAAGCACCAAGGGAA
GCTGTGAGGTTTCCACCTCACATTGAAGCCTTTAACCAGGGGCAAGAGGGGCCAGGAAGTGTGG
TGCTAAGCAGAGTTAGAAGATAAGTGAGAAAATGGGCCATTAAAAAGGCTTGGTTATCACCTAC
ATGCTCTCTTAAGGAACGTACTCTGTATAGCTGCCGGTGGTTTCATTTCCCATTTCCATACAGA
AACAGATGTAAGGCATGGATTGACGAGGGAACTGCTGGTAGCCCTGGGATGATACTCTCCTGTC
CTTTGCATCTTCAGGCAGAAACAGGTCTGAACAATGGCGTAGCAGCTACAGTCTCCATGTCAAG
ACCAATCCCACCCTTCACAGTTGGTAACGTTAATGTTGGCTTCTGTGCTACCTGTCATGACTTA
AGTGTCACCAGCTCCTTGACAGTATTCTTCCAGAGAACTTGTGTCATGTTCCTGCAGCCATGTA
TGTGAGTGCTCAGGGAACTTGAAGAGATAATCTCATGAAGTGTGCTGGGAATTAGCACTGTGAC
ACATGTAGCAGAGCAGGCCAGTTTCTTGATGGAATTGGTAGGTCTCTATGAAAGGTGACAGTAG
CTTTGGCATTCTTTGTCCCGTGTTTTAAGTAGAGAATTGTTGCTGGAAGATAGTGGTGCACACT
CTTTATCCCAGCACTTTGGAGGCAGAGGCAGGCTGATCTCTGAATTCTACAGACTGAGTTCCAA
GACAGCCAGAGAAACCCTGTCTCAAAATGTAGAAAAATTGTTAACACTGTTAGAGACACAGATA
GTTGACAATAGAGGTAGTCACCCCATTCTGCTTTGGTTTTGTTCTGCTGCCTCCCCTCCCTCCC
CTCACCCCTGTTTTCCTTTGGTATTTTAGACATTGATCAGTCATATCTCAGAGGGCTGGAATAA
GAAAAATCTATACACAGGTGAACACTTGTACTAGTGAGAGTTTACTTTGTACTAGAAAATGGGA
ATTGGGTAGTGGGCCTTGCTAAGACCATCAAGAAACTAGGTTTAAGCTGTGTTCTAAGCTGGTA
CAAATGACCTGTCAGAGGACCCCTTTACCTTCAGCTCCCCTTCTGAGATCCTAAATTCTGAATT
CAGAATCAGGATGGCAGAAGACAGTAATGGAGCTTTTAAGTTCTTAATGGTAATTGAAACAAAA
CAGGATGTGAAACAGTAAGAGGTAACTTTAATTTGAATAGGGCAGTTTGTTGCTATTATATATA
ATATGTAATGGTGTGGAACCAAATTTAAAATACTTTGAGAAATTCACATAGAACATTTTAGGAT
CAAGCACCAGGTGAAAACCAATCATTTTAGGACCTACCATGGTCATGTACATGTGATTCCAACA
CTGGAGGCTAAGGCAGAAGGATTAGGAGTTGGGGGCCAGTCTGGATTACTTAGCAAGTTCAGGA
CAACCTAAGCGGGTGTACAGAGTGAAACCTGCCCTGGGTTTGGGGGTGGGGTGGGGTGGGCGTG
ATGGTGGAGTAACACATTGCATTAAAATTAGTTTTAAAATGATAAAAGCTATTTCAGATAACTG
CCTTAAATTTCCTACAATAATTAAAACTTGGAATTCGAAGTTTTTGTGTATTTGTATACTCCAT
CCTACCTTCGTATATAGACTTCCAAAGGTTAATGTCCTAACAGCCGCTACAATGTTTACTCATG
AAAACCCAGCTAGTAAATATTGGTGTTCAGGGCTGCCAGCTTGCCCAGTCCTTGGGGTTCTGTT
CACATAGAACACAATTCGGAGTTGATCAAACACTGTTGCACTTTGCTTCATACTTCAAAACAAC
TTTCATTAGGAGCTCACATGCTGTCACTTAGACAAAATTAACTCACTGTGACCTTTTTGCTGTT
CTTACATAGTACTGACTCTAGTGTTGTCATTTCAGTGAGAATTCAGTCTGTCTGTCTTCGGGAA
ACGGCTCTAGTTCTAGGCAGTGAGAAGCAGCTCTTTAGCATCCGCAAAGTGTGCTATTTTCTCT
TCCTTTGACTTGTTCGGAATACAGTGGTGTGTCCTCATTTGTTACACGTATTACCATAATATTA
ATGCATCTTAATAAATCAGTTGGAATATACATTTGTGCCTTGTTTTCATCTTTAATTGTTAACT
TTTTATACTGAATTACCTGATGAAGCTTTCAAGTATCAGGCCTTTACAACCCTGCAGTGTGGAC
CCTTCTGGTTCTTTTGATAACGAGGTCAACCTGTTGAAAATCTTAACACTATTTGAACTTTAAT
CAGATTTGTATTCCATAGTTTCAAATTGTTTAACTAGTTTGTATTGCAAGGATATGATTTTAAA
AGGGGAAACCTACAGCATGGCACGAAGGAGAACATGTTTAATTCCCAGACCTCGGGTGTTTGCA
CTGACTCCAAAGTCACAATTCATGTACTCAATTGGCCATTTGTAGTGCCTATAGCTGCTGTTTT
GAAAGCAGAAAACCAAGTGCCCGGGCTAATATGGAAAAGAATCTGAAATTCTGGAAAGTAAGAA
TATCCACGTATTTGCTTTTGTATTGGGCACAAAGTTTATGCAGCAGATCTTCCAAGTAAAAAGG
ATTAATGAGTCACAAACCTCTCACTGCACTACACTGCAGCCACAAATTTTGACAAGCACCTCAC
GGGACTCTGCTTCCTCAGCGCCAGTGGGAGAGACCACGCCCCTTCTCGGAAACTGAGGTGGGGG
CGGGCGGTGGCTCCTGTGGCGTCACCTCCGGGCTGCGCGAGCACTTCCGGGTCACTGGCACAGG
GCTGCGGTTTCCGCGGCTGAGGTGGTCGCAGCGGGCTCCCTACCTGGCTCTGCTACCGCCGCGG
CGGAAGCGCCTTCCCTCAGGACATCAATGCAAGCCTGAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001100305	(Get FASTA)	NCBI Sequence Viewer
	NP_001423390	(Get FASTA)	NCBI Sequence Viewer
	NP_001423391	(Get FASTA)	NCBI Sequence Viewer
	XP_006243432	(Get FASTA)	NCBI Sequence Viewer
	XP_006243433	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL84203	(Get FASTA)	NCBI Sequence Viewer
	EDL84204	(Get FASTA)	NCBI Sequence Viewer
	EDL84205	(Get FASTA)	NCBI Sequence Viewer
	EDL84206	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000070548
	ENSRNOP00000070548.2
	ENSRNOP00000071923.1
	ENSRNOP00000096973
	ENSRNOP00000096973.2

RefSeq Acc Id:

NP_001100305 ⟸ NM_001106835

- UniProtKB:

A6KEV4 (UniProtKB/TrEMBL), A0A8I6AVU1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEGVELKEEWQDEDFPIPLPEDDSIEADILDVTDPDRQPGSLEVNGNKVRKKLVAPDISLTLDP
GEDSLWSDDLDEGGEVDLDGLDTPSENSDEFEWEDDLPKPKTTEVIRKGSITEYAATEEKEDGR
RWRMFRIGEQDHRVDMKAIEPYKKVISHGGYYGDGLNAIVVFAVCFMPESGQPNYRYLMDNLFK
YVIGTLELLVAENYMIIYLNGATTRRKMPSLGWLRRCYQQIDRRLRKNLKSLIIVHPSWFIRTL
LAVTRPFISSKFSQKIRYVFNLAELAELVPMEYVGIPECIKQCVSLLCFSSWIWARGLLLCLTV
LKNTGL

hide sequence

RefSeq Acc Id:

XP_006243433 ⟸ XM_006243371

- Peptide Label:

isoform X2

- Sequence:

show sequence

MEGVELKEEWQDEDFPIPLPEDDSIEADILDVTDPDRQPGSLEVNGNKVRKKLVAPDISLTLDP
GEDSLWSDDLDEGGEVDLDGLDTPSENSDEFEWEDDLPKPKTTEVIRKGSITEYAATEEKEDGR
RWRMFRIGEQDHRVDMKAIEPYKKVISHGGYYGDGLNAIVVFAVCFMPESGQPNYRYLMDNLFK
YVIGTLELLVAENYMIIYLNGATTRRKMPSLGWLRRCYQQIDRRLRKNLKSLIIVHPSWFIRTL
LAVTRPFISSKFSQKIRYVFNLAELAELVPMEYVGIPECIKQVDQELNGKQEPPKSEQ

hide sequence

RefSeq Acc Id:

XP_006243432 ⟸ XM_006243370

- Peptide Label:

isoform X1

- Sequence:

show sequence

MEGVELKEEWQDEDFPIPLPEDDSIEADILDVTDPDRQPGSLEVNGNKVRKKLVAPDISLTLDP
GEDSLWSDDLDEGGEVDLDGLDTPSENSDEFEWEDDLPKPKTTEVIRKGSITEYAATEEKEDGR
RWRMFRIGEQDHRVDMKAIEPYKKVISHGGYYGDGLNAIVVFAVCFMPESGQPNYRYLMDNLFK
YVIGTLELLVAENYMIIYLNGATTRRKMPSLGWLRRCYQQIDRRLRKNLKSLIIVHPSWFIRTL
LAVTRPFISSKFSQKIRYVFNLAELAELVPMEYVGIPECIKQYEEEKFKKRQKRVDQELNGKQE
PPKSEQ

hide sequence

Ensembl Acc Id:

ENSRNOP00000071923 ⟸ ENSRNOT00000087382

Ensembl Acc Id:

ENSRNOP00000070548 ⟸ ENSRNOT00000081072

Ensembl Acc Id:

ENSRNOP00000096973 ⟸ ENSRNOT00000102436

Protein Domains

CRAL-TRIO

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K1P3-F1-model_v2	AlphaFold	A0A0G2K1P3	1-331	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13696101

Promoter ID:

EPDNEW_R6626

Type:

initiation region

Name:

Bnip2_1

Description:

BCL2 interacting protein 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	8	76,400,375 - 76,400,435	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308944	AgrOrtholog
BioCyc Gene	G2FUF-29947	BioCyc
Ensembl Genes	ENSRNOG00000056024	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000081072	ENTREZGENE
	ENSRNOT00000081072.3	UniProtKB/TrEMBL
	ENSRNOT00000087382.3	UniProtKB/TrEMBL
	ENSRNOT00000102436	ENTREZGENE
	ENSRNOT00000102436.2	UniProtKB/TrEMBL
Gene3D-CATH	3.40.525.10	UniProtKB/TrEMBL
InterPro	Bcl2-/adenovirus-E1B	UniProtKB/TrEMBL
	CRAL-bd_TRIO_C	UniProtKB/TrEMBL
	CRAL-TRIO_dom_sf	UniProtKB/TrEMBL
KEGG Report	rno:300811	UniProtKB/TrEMBL
NCBI Gene	300811	ENTREZGENE
PANTHER	BCL2/ADENOVIRUS E1B 19 KDA PROTEIN-INTERACTING PROTEIN 2	UniProtKB/TrEMBL
	BNIP - RELATED	UniProtKB/TrEMBL
Pfam	BNIP2	UniProtKB/TrEMBL
	CRAL_TRIO_2	UniProtKB/TrEMBL
PhenoGen	Bnip2	PhenoGen
PROSITE	CRAL_TRIO	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000056024	RatGTEx
SMART	SEC14	UniProtKB/TrEMBL
Superfamily-SCOP	CRAL_TRIO_C	UniProtKB/TrEMBL
UniProt	A0A0G2K1P3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AVU1	ENTREZGENE, UniProtKB/TrEMBL
	A6KEV2	ENTREZGENE, UniProtKB/TrEMBL
	A6KEV3	ENTREZGENE, UniProtKB/TrEMBL
	A6KEV4	ENTREZGENE, UniProtKB/TrEMBL
	D3ZGE0	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2017-03-02	Bnip2	BCL2 interacting protein 2	Bnip2	BCL2/adenovirus E1B interacting protein 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-03	Bnip2	BCL2/adenovirus E1B interacting protein 2	Bnip2_predicted	BCL2/adenovirus E1B 19kDa-interacting protein 1, NIP2 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-12	Bnip2_predicted	BCL2/adenovirus E1B 19kDa-interacting protein 1, NIP2 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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RGD Manual Annotations