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Gene: Dhx30 (DExH-box helicase 30) Rattus norvegicus

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Symbol:

Dhx30

Name:

DExH-box helicase 30

RGD ID:

1308888

Description:

Predicted to enable RNA binding activity; chromatin binding activity; and helicase activity. Predicted to be involved in central nervous system development and mitochondrial large ribosomal subunit assembly. Predicted to be located in cytosol; mitochondrial nucleoid; and ribonucleoprotein granule. Predicted to be active in cytoplasm and nucleus. Orthologous to human DHX30 (DExH-box helicase 30); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

ATP-dependent RNA helicase DHX30; DEAH (Asp-Glu-Ala-His) box helicase 30; DEAH (Asp-Glu-Ala-His) box polypeptide 30; DEAH box protein 30; DEAH-box helicase 30; LOC367172; MGC109411; putative ATP-dependent RNA helicase DHX30

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DHX30 (DExH-box helicase 30)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Dhx30 (DExH-box helicase 30)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Dhx30 (DExH-box helicase 30)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DHX30 (DExH-box helicase 30)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	DHX30 (DExH-box helicase 30)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Dhx30 (DExH-box helicase 30)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	DHX30 (DExH-box helicase 30)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DHX30 (DExH-box helicase 30)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Dhx30 (DExH-box helicase 30)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	DHX30 (DExH-box helicase 30)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Dhx30 (DExH-box helicase 30)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	dhx30 (DEAH (Asp-Glu-Ala-His) box helicase 30)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	dhx30	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	118,943,186 - 118,975,319 (-)	NCBI		GRCr8
mRatBN7.2	8	110,064,751 - 110,096,954 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	110,064,752 - 110,097,381 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	115,680,523 - 115,712,489 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	113,879,711 - 113,911,677 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	111,722,475 - 111,754,443 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	118,160,315 - 118,194,674 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	118,160,299 - 118,187,791 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	117,515,769 - 117,547,561 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	114,438,389 - 114,470,350 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	114,457,844 - 114,489,805 (-)	NCBI
Celera	8	109,352,489 - 109,384,567 (-)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Dhx30	Rat	autism spectrum disorder		ISO	DHX30 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autism and susceptiblity to	ClinVar	PMID:25741868
Dhx30	Rat	autistic disorder		ISO	DHX30 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autism	ClinVar	PMID:28327206 more ...
Dhx30	Rat	Developmental Disabilities		ISO	DHX30 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Global developmental delay	ClinVar	PMID:25741868 more ...
Dhx30	Rat	epilepsy		ISO	DHX30 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Seizure	ClinVar	PMID:29100085
Dhx30	Rat	genetic disease		ISO	DHX30 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:25741868 more ...
Dhx30	Rat	NEURODEVELOPMENTAL DISORDER WITH SEVERE MOTOR IMPAIRMENT AND ABSENT LANGUAGE		ISO	DHX30 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:25741868 more ...
Dhx30	Rat	Progressive Microcephaly with Seizures and Cerebral and Cerebellar Atrophy		ISO	DHX30 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Microcephaly more ...	ClinVar	PMID:28492532

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Dhx30	Rat	Prostatic Neoplasms		ISO	DHX30 (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:29610475

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Dhx30	Rat	NEURODEVELOPMENTAL DISORDER WITH SEVERE MOTOR IMPAIRMENT AND ABSENT LANGUAGE		ISO	DHX30 (Homo sapiens)	7240710		OMIM

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Dhx30	Rat	1,2-dimethylhydrazine	multiple interactions	ISO	Dhx30 (Mus musculus)	6480464	[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of DHX30 mRNA	CTD	PMID:22206623
Dhx30	Rat	17alpha-ethynylestradiol	increases expression	ISO	Dhx30 (Mus musculus)	6480464	Ethinyl Estradiol results in increased expression of DHX30 mRNA	CTD	PMID:17942748
Dhx30	Rat	17beta-estradiol	multiple interactions	ISO	DHX30 (Homo sapiens)	6480464	Estradiol inhibits the reaction [ESR1 protein binds to DHX30 protein]	CTD	PMID:29389661
Dhx30	Rat	17beta-hydroxy-17-methylestra-4,9,11-trien-3-one	multiple interactions	ISO	DHX30 (Homo sapiens)	6480464	[Metribolone binds to and affects the folding of AR protein] inhibits the reaction [AR protein modified form binds to DHX30 protein modified form]	CTD	PMID:28751236
Dhx30	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	Dhx30 (Mus musculus)	6480464	Tetrachlorodibenzodioxin affects the expression of DHX30 mRNA	CTD	PMID:21570461
Dhx30	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	EXP		6480464	Tetrachlorodibenzodioxin results in increased expression of DHX30 mRNA	CTD	PMID:33387578
Dhx30	Rat	2,4-dinitrotoluene	affects expression	EXP		6480464	2 and 4-dinitrotoluene affects the expression of DHX30 mRNA	CTD	PMID:21346803
Dhx30	Rat	2,6-dinitrotoluene	affects expression	EXP		6480464	2 and 6-dinitrotoluene affects the expression of DHX30 mRNA	CTD	PMID:21346803
Dhx30	Rat	2-methylcholine	affects expression	ISO	DHX30 (Homo sapiens)	6480464	beta-methylcholine affects the expression of DHX30 mRNA	CTD	PMID:21179406
Dhx30	Rat	3-chloropropane-1,2-diol	increases expression	EXP		6480464	alpha-Chlorohydrin results in increased expression of DHX30 protein	CTD	PMID:34915118
Dhx30	Rat	4,4'-sulfonyldiphenol	multiple interactions	ISO	DHX30 (Homo sapiens)	6480464	bisphenol S inhibits the reaction [ESR1 protein binds to DHX30 protein]	CTD	PMID:29389661
Dhx30	Rat	acrolein	multiple interactions	ISO	DHX30 (Homo sapiens)	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of DHX30 mRNA more ...	CTD	PMID:32699268 and PMID:32845096
Dhx30	Rat	aflatoxin B1	decreases methylation	ISO	DHX30 (Homo sapiens)	6480464	Aflatoxin B1 results in decreased methylation of DHX30 intron	CTD	PMID:30157460
Dhx30	Rat	allethrin	multiple interactions	EXP		6480464	[cypermethrin co-treated with decamethrin co-treated with fenvalerate co-treated with cyhalothrin co-treated with Allethrins] results in decreased expression of DHX30 protein	CTD	PMID:34896426
Dhx30	Rat	alpha-pinene	multiple interactions	ISO	DHX30 (Homo sapiens)	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of DHX30 mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in increased oxidation of DHX30 mRNA	CTD	PMID:32699268
Dhx30	Rat	benzo[a]pyrene	increases expression	ISO	Dhx30 (Mus musculus)	6480464	Benzo(a)pyrene results in increased expression of DHX30 mRNA	CTD	PMID:22228805
Dhx30	Rat	benzo[e]pyrene	decreases methylation	ISO	DHX30 (Homo sapiens)	6480464	benzo(e)pyrene results in decreased methylation of DHX30 intron	CTD	PMID:30157460
Dhx30	Rat	beta-lapachone	increases expression	ISO	DHX30 (Homo sapiens)	6480464	beta-lapachone results in increased expression of DHX30 mRNA	CTD	PMID:38218311
Dhx30	Rat	bis(2-ethylhexyl) phthalate	increases expression	ISO	Dhx30 (Mus musculus)	6480464	Diethylhexyl Phthalate results in increased expression of DHX30 mRNA	CTD	PMID:33754040
Dhx30	Rat	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of DHX30 mRNA	CTD	PMID:25181051 and PMID:34947998
Dhx30	Rat	bisphenol A	decreases expression	ISO	DHX30 (Homo sapiens)	6480464	bisphenol A results in decreased expression of DHX30 protein	CTD	PMID:37567409
Dhx30	Rat	bisphenol A	multiple interactions	ISO	DHX30 (Homo sapiens)	6480464	[bisphenol A binds to and affects the folding of AR protein] promotes the reaction [AR protein modified form binds to DHX30 protein modified form] and bisphenol A inhibits the reaction [ESR1 protein binds to DHX30 protein]	CTD	PMID:28751236 and PMID:29389661
Dhx30	Rat	bisphenol A	increases methylation	EXP		6480464	bisphenol A results in increased methylation of DHX30 gene	CTD	PMID:28505145
Dhx30	Rat	bisphenol AF	multiple interactions	ISO	DHX30 (Homo sapiens)	6480464	[bisphenol AF binds to and affects the folding of AR protein] affects the reaction [AR protein modified form binds to DHX30 protein modified form] and bisphenol AF inhibits the reaction [ESR1 protein binds to DHX30 protein]	CTD	PMID:28751236 and PMID:29389661
Dhx30	Rat	caffeine	increases phosphorylation	ISO	DHX30 (Homo sapiens)	6480464	Caffeine results in increased phosphorylation of DHX30 protein	CTD	PMID:35688186
Dhx30	Rat	clofibrate	decreases expression	ISO	Dhx30 (Mus musculus)	6480464	Clofibrate results in decreased expression of DHX30 mRNA	CTD	PMID:17585979
Dhx30	Rat	clozapine	increases expression	ISO	DHX30 (Homo sapiens)	6480464	Clozapine results in increased expression of DHX30 protein	CTD	PMID:34122009
Dhx30	Rat	cocaine	affects expression	EXP		6480464	Cocaine affects the expression of DHX30 mRNA	CTD	PMID:20187946
Dhx30	Rat	copper atom	decreases expression	EXP		6480464	Copper results in decreased expression of DHX30 mRNA	CTD	PMID:22465980
Dhx30	Rat	copper(0)	decreases expression	EXP		6480464	Copper results in decreased expression of DHX30 mRNA	CTD	PMID:22465980
Dhx30	Rat	copper(II) sulfate	decreases expression	ISO	DHX30 (Homo sapiens)	6480464	Copper Sulfate results in decreased expression of DHX30 mRNA	CTD	PMID:19549813
Dhx30	Rat	cyclosporin A	increases expression	ISO	DHX30 (Homo sapiens)	6480464	Cyclosporine results in increased expression of DHX30 mRNA	CTD	PMID:25562108
Dhx30	Rat	cyhalothrin	multiple interactions	EXP		6480464	[cypermethrin co-treated with decamethrin co-treated with fenvalerate co-treated with cyhalothrin co-treated with Allethrins] results in decreased expression of DHX30 protein	CTD	PMID:34896426
Dhx30	Rat	cypermethrin	multiple interactions	EXP		6480464	[cypermethrin co-treated with decamethrin co-treated with fenvalerate co-treated with cyhalothrin co-treated with Allethrins] results in decreased expression of DHX30 protein	CTD	PMID:34896426
Dhx30	Rat	cyproterone acetate	multiple interactions	ISO	DHX30 (Homo sapiens)	6480464	[Cyproterone Acetate binds to and affects the folding of AR protein] promotes the reaction [AR protein modified form binds to DHX30 protein modified form]	CTD	PMID:28751236
Dhx30	Rat	disodium selenite	increases expression	ISO	DHX30 (Homo sapiens)	6480464	Sodium Selenite results in increased expression of DHX30 mRNA	CTD	PMID:18175754
Dhx30	Rat	dorsomorphin	multiple interactions	ISO	DHX30 (Homo sapiens)	6480464	[NOG protein co-treated with p-Chloromercuribenzoic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ...	CTD	PMID:27188386
Dhx30	Rat	doxorubicin	decreases expression	ISO	Dhx30 (Mus musculus)	6480464	Doxorubicin results in decreased expression of DHX30 mRNA	CTD	PMID:16243910
Dhx30	Rat	elemental selenium	increases expression	ISO	DHX30 (Homo sapiens)	6480464	Selenium results in increased expression of DHX30 mRNA	CTD	PMID:19244175
Dhx30	Rat	entinostat	decreases expression	ISO	DHX30 (Homo sapiens)	6480464	entinostat results in decreased expression of DHX30 mRNA	CTD	PMID:27188386
Dhx30	Rat	enzyme inhibitor	multiple interactions	ISO	DHX30 (Homo sapiens)	6480464	[Enzyme Inhibitors results in decreased activity of OGA protein] which results in increased O-linked glycosylation of DHX30 protein	CTD	PMID:23301498
Dhx30	Rat	fenthion	decreases expression	ISO	Dhx30 (Mus musculus)	6480464	Fenthion results in decreased expression of DHX30 mRNA	CTD	PMID:34813904
Dhx30	Rat	fenvalerate	multiple interactions	EXP		6480464	[cypermethrin co-treated with decamethrin co-treated with fenvalerate co-treated with cyhalothrin co-treated with Allethrins] results in decreased expression of DHX30 protein	CTD	PMID:34896426
Dhx30	Rat	flutamide	increases expression	EXP		6480464	Flutamide results in increased expression of DHX30 mRNA	CTD	PMID:24136188
Dhx30	Rat	folic acid	multiple interactions	ISO	Dhx30 (Mus musculus)	6480464	[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of DHX30 mRNA	CTD	PMID:22206623
Dhx30	Rat	genistein	increases expression	ISO	DHX30 (Homo sapiens)	6480464	Genistein results in increased expression of DHX30 mRNA	CTD	PMID:26865667
Dhx30	Rat	gentamycin	increases expression	EXP		6480464	Gentamicins results in increased expression of DHX30 mRNA	CTD	PMID:22061828
Dhx30	Rat	inulin	multiple interactions	ISO	Dhx30 (Mus musculus)	6480464	[perfluorooctane sulfonic acid co-treated with Inulin] results in decreased expression of DHX30 mRNA	CTD	PMID:36331819
Dhx30	Rat	ivermectin	decreases expression	ISO	DHX30 (Homo sapiens)	6480464	Ivermectin results in decreased expression of DHX30 protein	CTD	PMID:32959892
Dhx30	Rat	methapyrilene	decreases methylation	ISO	DHX30 (Homo sapiens)	6480464	Methapyrilene results in decreased methylation of DHX30 intron	CTD	PMID:30157460
Dhx30	Rat	methidathion	decreases expression	ISO	Dhx30 (Mus musculus)	6480464	methidathion results in decreased expression of DHX30 mRNA	CTD	PMID:34813904
Dhx30	Rat	ozone	multiple interactions	ISO	DHX30 (Homo sapiens)	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of DHX30 mRNA more ...	CTD	PMID:32699268 and PMID:32845096
Dhx30	Rat	ozone	multiple interactions	ISO	Dhx30 (Mus musculus)	6480464	[Air Pollutants results in increased abundance of [Ozone co-treated with Soot]] which results in increased expression of DHX30 mRNA and [Air Pollutants results in increased abundance of Ozone] which affects the expression of DHX30 mRNA	CTD	PMID:34911549
Dhx30	Rat	p-chloromercuribenzoic acid	decreases expression	ISO	DHX30 (Homo sapiens)	6480464	p-Chloromercuribenzoic Acid results in decreased expression of DHX30 mRNA	CTD	PMID:26272509
Dhx30	Rat	p-chloromercuribenzoic acid	multiple interactions	ISO	DHX30 (Homo sapiens)	6480464	[NOG protein co-treated with p-Chloromercuribenzoic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of DHX30 mRNA	CTD	PMID:27188386
Dhx30	Rat	paracetamol	affects expression	ISO	Dhx30 (Mus musculus)	6480464	Acetaminophen affects the expression of DHX30 mRNA	CTD	PMID:17562736
Dhx30	Rat	paracetamol	decreases expression	ISO	DHX30 (Homo sapiens)	6480464	Acetaminophen results in decreased expression of DHX30 mRNA	CTD	PMID:22230336 and PMID:25704631
Dhx30	Rat	pentachlorophenol	increases expression	ISO	Dhx30 (Mus musculus)	6480464	Pentachlorophenol results in increased expression of DHX30 mRNA	CTD	PMID:23892564
Dhx30	Rat	perfluorooctane-1-sulfonic acid	multiple interactions	ISO	Dhx30 (Mus musculus)	6480464	[perfluorooctane sulfonic acid co-treated with Inulin] results in decreased expression of DHX30 mRNA and [perfluorooctane sulfonic acid co-treated with Pectins] results in decreased expression of DHX30 mRNA	CTD	PMID:36331819
Dhx30	Rat	perfluorooctanoic acid	increases expression	ISO	DHX30 (Homo sapiens)	6480464	perfluorooctanoic acid results in increased expression of DHX30 protein	CTD	PMID:26879310
Dhx30	Rat	pyrethrins	decreases expression	EXP		6480464	Pyrethrins results in decreased expression of DHX30 protein	CTD	PMID:34896426
Dhx30	Rat	SB 431542	multiple interactions	ISO	DHX30 (Homo sapiens)	6480464	[NOG protein co-treated with p-Chloromercuribenzoic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ...	CTD	PMID:27188386
Dhx30	Rat	selenium atom	increases expression	ISO	DHX30 (Homo sapiens)	6480464	Selenium results in increased expression of DHX30 mRNA	CTD	PMID:19244175
Dhx30	Rat	sevoflurane	affects expression	EXP		6480464	sevoflurane affects the expression of DHX30 mRNA	CTD	PMID:15967596
Dhx30	Rat	silicon dioxide	decreases expression	ISO	Dhx30 (Mus musculus)	6480464	Silicon Dioxide results in decreased expression of DHX30 mRNA	CTD	PMID:19073995
Dhx30	Rat	sodium arsenite	decreases expression	ISO	DHX30 (Homo sapiens)	6480464	sodium arsenite results in decreased expression of DHX30 mRNA	CTD	PMID:38568856
Dhx30	Rat	sodium arsenite	increases expression	ISO	DHX30 (Homo sapiens)	6480464	sodium arsenite results in increased expression of DHX30 mRNA	CTD	PMID:34032870
Dhx30	Rat	sodium fluoride	decreases expression	ISO	Dhx30 (Mus musculus)	6480464	Sodium Fluoride results in decreased expression of DHX30 protein	CTD	PMID:28918527
Dhx30	Rat	sunitinib	decreases expression	ISO	DHX30 (Homo sapiens)	6480464	Sunitinib results in decreased expression of DHX30 mRNA	CTD	PMID:31533062
Dhx30	Rat	tamoxifen	affects expression	ISO	Dhx30 (Mus musculus)	6480464	Tamoxifen affects the expression of DHX30 mRNA	CTD	PMID:17555576
Dhx30	Rat	tamoxifen	multiple interactions	ISO	DHX30 (Homo sapiens)	6480464	Tamoxifen inhibits the reaction [ESR1 protein binds to DHX30 protein]	CTD	PMID:23665804
Dhx30	Rat	tetrachloromethane	increases expression	ISO	Dhx30 (Mus musculus)	6480464	Carbon Tetrachloride results in increased expression of DHX30 mRNA	CTD	PMID:31919559
Dhx30	Rat	titanium dioxide	decreases methylation	ISO	Dhx30 (Mus musculus)	6480464	titanium dioxide results in decreased methylation of DHX30 gene and titanium dioxide results in decreased methylation of DHX30 promoter	CTD	PMID:35295148
Dhx30	Rat	trichostatin A	decreases expression	ISO	DHX30 (Homo sapiens)	6480464	trichostatin A results in decreased expression of DHX30 mRNA	CTD	PMID:24935251 and PMID:26272509
Dhx30	Rat	trichostatin A	affects expression	ISO	DHX30 (Homo sapiens)	6480464	trichostatin A affects the expression of DHX30 mRNA	CTD	PMID:28542535
Dhx30	Rat	trichostatin A	multiple interactions	ISO	DHX30 (Homo sapiens)	6480464	[NOG protein co-treated with trichostatin A co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of DHX30 mRNA	CTD	PMID:27188386
Dhx30	Rat	triptonide	affects expression	ISO	Dhx30 (Mus musculus)	6480464	triptonide affects the expression of DHX30 mRNA	CTD	PMID:33045310
Dhx30	Rat	valproic acid	increases methylation	ISO	DHX30 (Homo sapiens)	6480464	Valproic Acid results in increased methylation of DHX30 gene	CTD	PMID:29154799
Dhx30	Rat	valproic acid	affects expression	ISO	Dhx30 (Mus musculus)	6480464	Valproic Acid affects the expression of DHX30 mRNA	CTD	PMID:17292431
Dhx30	Rat	valproic acid	decreases expression	ISO	DHX30 (Homo sapiens)	6480464	Valproic Acid results in decreased expression of DHX30 mRNA	CTD	PMID:23179753 and PMID:26272509
Dhx30	Rat	valproic acid	multiple interactions	ISO	DHX30 (Homo sapiens)	6480464	[NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of DHX30 mRNA	CTD	PMID:27188386

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Dhx30	Rat	central nervous system development	involved_in	ISS	UniProtKB:Q99PU8	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Dhx30	Rat	central nervous system development	involved_in	IEA	UniProtKB:Q99PU8 and ensembl:ENSMUSP00000142489	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Dhx30	Rat	central nervous system development	involved_in	ISO	Dhx30 (Mus musculus)	1624291	PMID:25219788	RGD	PMID:25219788
Dhx30	Rat	mitochondrial large ribosomal subunit assembly	involved_in	ISS	UniProtKB:Q7L2E3	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Dhx30	Rat	mitochondrial large ribosomal subunit assembly	involved_in	ISO	DHX30 (Homo sapiens)	1624291	PMID:25683715	RGD	PMID:25683715
Dhx30	Rat	mitochondrial large ribosomal subunit assembly	involved_in	IEA	UniProtKB:Q7L2E3 and ensembl:ENSP00000405620	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Dhx30	Rat	ribosome biogenesis	involved_in	IEA	UniProtKB-KW:KW-0690	1600115	GO_REF:0000043	UniProt	GO_REF:0000043

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Dhx30	Rat	cytoplasm	located_in	ISO	DHX30 (Homo sapiens)	1624291	PMID:29100085	RGD	PMID:29100085
Dhx30	Rat	cytoplasm	located_in	IEA	UniProtKB:Q7L2E3 and ensembl:ENSP00000405620	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Dhx30	Rat	cytoplasm	located_in	IEA	UniProtKB:Q99PU8 and ensembl:ENSMUSP00000142489	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Dhx30	Rat	cytoplasm	located_in	IEA	UniProtKB-KW:KW-0963	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Dhx30	Rat	cytoplasm	located_in	ISO	Dhx30 (Mus musculus)	1624291	PMID:25219788	RGD	PMID:25219788
Dhx30	Rat	cytoplasm	located_in	IEA	UniProtKB-SubCell:SL-0086	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Dhx30	Rat	cytoplasm	is_active_in	IBA	MGI:1919412 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Dhx30	Rat	cytoplasm	located_in	ISS	UniProtKB:Q7L2E3	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Dhx30	Rat	cytoplasm	located_in	ISS	UniProtKB:Q99PU8	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Dhx30	Rat	cytosol	located_in	ISO	DHX30 (Homo sapiens) more ...	1624291		RGD	GO_REF:0000052
Dhx30	Rat	cytosol	located_in	IEA	UniProtKB:Q7L2E3 and ensembl:ENSP00000405620	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Dhx30	Rat	mitochondrial matrix	located_in	ISO	DHX30 (Homo sapiens)	1624291	PMID:23275553	RGD	PMID:23275553
Dhx30	Rat	mitochondrial matrix	located_in	IEA	UniProtKB:Q7L2E3 and ensembl:ENSP00000405620	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Dhx30	Rat	mitochondrial nucleoid	located_in	ISS	UniProtKB:Q7L2E3	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Dhx30	Rat	mitochondrial nucleoid	located_in	IEA	UniProtKB-KW:KW-1135	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Dhx30	Rat	mitochondrial nucleoid	located_in	IEA	UniProtKB:Q7L2E3 and ensembl:ENSP00000405620	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Dhx30	Rat	mitochondrial nucleoid	located_in	IEA	UniProtKB-SubCell:SL-0269	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Dhx30	Rat	mitochondrial nucleoid	located_in	ISO	DHX30 (Homo sapiens)	1624291	PMID:18063578 and PMID:25683715	RGD	PMID:18063578 and PMID:25683715
Dhx30	Rat	mitochondrion	located_in	ISO	DHX30 (Homo sapiens) more ...	1624291		RGD	GO_REF:0000052
Dhx30	Rat	mitochondrion	located_in	IEA	UniProtKB-SubCell:SL-0173	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Dhx30	Rat	mitochondrion	located_in	IEA	UniProtKB:Q7L2E3 and ensembl:ENSP00000405620	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Dhx30	Rat	mitochondrion	located_in	ISS	UniProtKB:Q7L2E3	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Dhx30	Rat	mitochondrion	located_in	IEA	UniProtKB-KW:KW-0496	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Dhx30	Rat	mitochondrion	located_in	ISO	DHX30 (Homo sapiens)	1624291	PMID:29100085	RGD	PMID:29100085
Dhx30	Rat	nucleus	is_active_in	IBA	PANTHER:PTN000717298 and UniProtKB:Q9H2U1	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Dhx30	Rat	ribonucleoprotein granule	located_in	ISS	UniProtKB:Q7L2E3	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Dhx30	Rat	ribonucleoprotein granule	located_in	ISO	DHX30 (Homo sapiens)	1624291	PMID:25683715	RGD	PMID:25683715
Dhx30	Rat	ribonucleoprotein granule	located_in	IEA	UniProtKB:Q7L2E3 and ensembl:ENSP00000405620	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Dhx30	Rat	ATP binding	enables	IEA	UniProtKB-KW:KW-0067	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Dhx30	Rat	ATP binding	enables	IEA	InterPro:IPR011545	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Dhx30	Rat	ATP hydrolysis activity	enables	IEA	RHEA:13065	1600115	GO_REF:0000116	RHEA	GO_REF:0000116
Dhx30	Rat	chromatin binding	enables	ISO	DHX30 (Homo sapiens)	1624291	PMID:18063578	RGD	PMID:18063578
Dhx30	Rat	chromatin binding	enables	IEA	UniProtKB:Q7L2E3 and ensembl:ENSP00000405620	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Dhx30	Rat	chromatin binding	enables	ISS	UniProtKB:Q7L2E3	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Dhx30	Rat	DNA helicase activity	enables	IBA	FB:FBgn0032883 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Dhx30	Rat	double-stranded RNA binding	enables	ISO	DHX30 (Homo sapiens)	1624291	PMID:21266579	RGD	PMID:21266579
Dhx30	Rat	double-stranded RNA binding	enables	IEA	UniProtKB:Q7L2E3 and ensembl:ENSP00000405620	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Dhx30	Rat	G-quadruplex RNA binding	enables	IBA	FB:FBgn0032883 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Dhx30	Rat	helicase activity	enables	IEA	UniProtKB-KW:KW-0347	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Dhx30	Rat	hydrolase activity	enables	IEA	UniProtKB-KW:KW-0378	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Dhx30	Rat	nucleic acid binding	enables	IEA	InterPro:IPR011545	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Dhx30	Rat	nucleotide binding	enables	IEA	UniProtKB-KW:KW-0547	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Dhx30	Rat	protein binding	enables	IPI	UniProtKB:Q7Z2W4	8553585	PMID:21204022	UniProt
Dhx30	Rat	protein binding	enables	IPI	UniProtKB:Q8K3Y6	8553585	PMID:21204022	UniProt
Dhx30	Rat	protein binding	enables	ISO	DHX30 (Homo sapiens)	1624291	UniProtKB:P13569 more ...	RGD	PMID:17932509 more ...
Dhx30	Rat	RNA binding	enables	ISS	UniProtKB:Q7L2E3	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Dhx30	Rat	RNA binding	enables	IEA	UniProtKB:Q7L2E3 and ensembl:ENSP00000405620	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Dhx30	Rat	RNA binding	enables	IEA	UniProtKB-KW:KW-0694	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Dhx30	Rat	RNA binding	enables	ISO	DHX30 (Homo sapiens)	1624291	PMID:29100085	RGD	PMID:29100085
Dhx30	Rat	RNA helicase activity	enables	ISO	Dhx30 (Mus musculus)	1624291	PMID:25219788	RGD	PMID:25219788
Dhx30	Rat	RNA helicase activity	enables	IBA	FB:FBgn0032883 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Dhx30	Rat	RNA helicase activity	enables	IEA	UniProtKB:Q99PU8 and ensembl:ENSMUSP00000142489	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Dhx30	Rat	RNA helicase activity	enables	IEA	UniProtKB:Q7L2E3 and ensembl:ENSP00000405620	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Dhx30	Rat	RNA helicase activity	enables	IEA	EC:3.6.4.13	1600115	GO_REF:0000003	UniProt	GO_REF:0000003
Dhx30	Rat	RNA helicase activity	enables	ISS	UniProtKB:Q99PU8	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Dhx30	Rat	RNA helicase activity	enables	ISS	UniProtKB:Q7L2E3	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Dhx30	Rat	RNA helicase activity	enables	ISO	DHX30 (Homo sapiens)	1624291	PMID:29100085	RGD	PMID:29100085

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
4.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
5.	DEXH-Box protein DHX30 is required for optimal function of the zinc-finger antiviral protein.	Ye P, etal., Protein Cell. 2010 Oct;1(10):956-64. doi: 10.1007/s13238-010-0117-8. Epub 2010 Nov 9.

PMID:15489334	PMID:18063578	PMID:21266579	PMID:22658674	PMID:22681889	PMID:25219788	PMID:25683715	PMID:29100085	PMID:31904090

Dhx30
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	118,943,186 - 118,975,319 (-)	NCBI		GRCr8
mRatBN7.2	8	110,064,751 - 110,096,954 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	110,064,752 - 110,097,381 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	115,680,523 - 115,712,489 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	113,879,711 - 113,911,677 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	111,722,475 - 111,754,443 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	118,160,315 - 118,194,674 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	118,160,299 - 118,187,791 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	117,515,769 - 117,547,561 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	114,438,389 - 114,470,350 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	114,457,844 - 114,489,805 (-)	NCBI
Celera	8	109,352,489 - 109,384,567 (-)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

DHX30
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	47,803,138 - 47,850,193 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	47,802,909 - 47,850,195 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	47,844,628 - 47,891,683 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	47,819,655 - 47,866,687 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	47,819,654 - 47,866,686	NCBI
Celera	3	47,794,449 - 47,841,545 (+)	NCBI		Celera
Cytogenetic Map	3	p21.31	NCBI
HuRef	3	47,899,640 - 47,947,043 (+)	NCBI		HuRef
CHM1_1	3	47,795,669 - 47,842,932 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	47,830,461 - 47,877,524 (+)	NCBI		T2T-CHM13v2.0

Dhx30
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	109,913,387 - 109,946,728 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	109,913,388 - 109,946,898 (-)	Ensembl		GRCm39 Ensembl
GRCm38	9	110,084,319 - 110,117,616 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	110,084,320 - 110,117,830 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	109,986,824 - 110,018,086 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	109,929,496 - 109,960,758 (-)	NCBI		MGSCv36	mm8
Celera	9	109,812,519 - 109,843,847 (-)	NCBI		Celera
Cytogenetic Map	9	F2	NCBI
cM Map	9	59.86	NCBI

Dhx30
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	24,537,608 - 24,561,293 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955420	24,537,608 - 24,549,771 (-)	NCBI	ChiLan1.0	ChiLan1.0

DHX30
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	47,770,959 - 47,818,666 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	47,775,971 - 47,823,434 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	47,715,275 - 47,762,872 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	48,833,785 - 48,858,037 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	48,819,125 - 48,857,964 (+)	Ensembl	panpan1.1		panPan2

DHX30
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	41,102,064 - 41,131,464 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	41,102,080 - 41,129,429 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	41,019,046 - 41,048,443 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	41,585,579 - 41,614,984 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	41,585,582 - 41,614,892 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	40,827,709 - 40,857,125 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	41,229,130 - 41,258,515 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	41,508,803 - 41,538,213 (-)	NCBI		UU_Cfam_GSD_1.0

Dhx30
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	201,870,062 - 201,905,658 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936596	1,421,094 - 1,455,356 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936596	1,419,165 - 1,454,797 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DHX30
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	30,617,376 - 30,632,497 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	30,602,008 - 30,632,506 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	33,878,421 - 33,908,846 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DHX30
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	9,191,527 - 9,239,445 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	9,206,175 - 9,239,372 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	157,866,168 - 157,919,224 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dhx30
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	73,656,361 - 73,681,999 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	73,656,378 - 73,685,863 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Dhx30
52 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	96
Count of miRNA genes:	82
Interacting mature miRNAs:	89
Transcripts:	ENSRNOT00000048764
Prediction methods:	Microtar, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2303171	Bp331	Blood pressure QTL 331	5.57	0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	61290298	119084929	Rat
1549909	Stresp11	Stress response QTL 11	6.83	0.0019	stress-related behavior trait (VT:0010451)	number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)	8	73473045	118473045	Rat
631210	Bw3	Body weight QTL3	5.9		mesenteric fat pad mass (VT:0010427)	mesenteric fat pad weight to body weight ratio (CMO:0000654)	8	69349194	112783834	Rat
1358903	Bp252	Blood pressure QTL 252	7	0.0001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	93965141	123900184	Rat
1554321	Bmd3	Bone mineral density QTL 3	7.9	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	40952565	123900184	Rat
9590292	Uminl3	Urine mineral level QTL 3	3.62	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	8	71888757	116888757	Rat
8694446	Bw170	Body weight QTL 170	12.07	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	8	71888757	116888757	Rat
631650	Stl6	Serum triglyceride level QTL 6	4	0.0019	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	8	10378157	112202585	Rat
631653	Bp125	Blood pressure QTL 125	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	66142385	111142385	Rat
1581557	Eae16	Experimental allergic encephalomyelitis QTL 16	3.8		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	8	8462195	110921472	Rat
738011	Anxrr9	Anxiety related response QTL 9	6.1		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	8	93535351	123900184	Rat
724539	Cm19	Cardiac mass QTL 19	2.6		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	8	100149864	120994388	Rat
70197	BpQTLcluster8	Blood pressure QTL cluster 8	3.482		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	46531639	119088626	Rat
738014	Anxrr15	Anxiety related response QTL 15	3.6	0.005	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	8	95718998	123900184	Rat
2300182	Bmd56	Bone mineral density QTL 56	5.4		femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	95718998	123900184	Rat
2300181	Bmd55	Bone mineral density QTL 55	5.7	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	76468691	121468691	Rat
1300171	Bp184	Blood pressure QTL 184	3.66		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	8	70513503	118219066	Rat
1358893	Bp263	Blood pressure QTL 263	5.01		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	93965141	123900184	Rat
2313400	Anxrr25	Anxiety related response QTL 25			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	8	89265192	114019816	Rat
8694200	Abfw4	Abdominal fat weight QTL 4	9.07	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	8	71888757	116888757	Rat
8694392	Bw161	Body weight QTL 161	8.06	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	8	71888757	116888757	Rat
61437	Cia6	Collagen induced arthritis QTL 6			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	8	82460758	122812818	Rat

AU015424

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	110,064,769 - 110,065,001 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	118,160,334 - 118,160,565	NCBI	Rnor6.0
Rnor_5.0	8	117,515,788 - 117,516,019	UniSTS	Rnor5.0
RGSC_v3.4	8	114,438,408 - 114,438,639	UniSTS	RGSC3.4
Celera	8	109,352,508 - 109,352,739	UniSTS
Cytogenetic Map	8	q32	UniSTS

BF393382

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	110,090,825 - 110,091,052 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	118,186,406 - 118,186,632	NCBI	Rnor6.0
Rnor_5.0	8	117,541,558 - 117,541,784	UniSTS	Rnor5.0
RGSC_v3.4	8	114,464,347 - 114,464,573	UniSTS	RGSC3.4
Celera	8	109,378,562 - 109,378,788	UniSTS
RH 3.4 Map	8	1113.29	UniSTS
Cytogenetic Map	8	q32	UniSTS

Dhx30

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	110,067,074 - 110,068,396 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	118,162,637 - 118,163,958	NCBI	Rnor6.0
Rnor_5.0	8	117,518,091 - 117,519,412	UniSTS	Rnor5.0
RGSC_v3.4	8	114,440,711 - 114,442,032	UniSTS	RGSC3.4
Celera	8	109,354,811 - 109,356,132	UniSTS
Cytogenetic Map	8	q32	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_001013249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006243826	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006243829	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006243830	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006243831	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595798	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595799	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595800	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595802	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265938	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC128747	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC091359	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000048764 ⟹ ENSRNOP00000043896

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	110,064,752 - 110,080,832 (-)	Ensembl
Rnor_6.0 Ensembl	8	118,160,388 - 118,187,791 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000084838 ⟹ ENSRNOP00000069744

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	110,064,752 - 110,079,212 (-)	Ensembl
Rnor_6.0 Ensembl	8	118,160,299 - 118,182,559 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000094963 ⟹ ENSRNOP00000096872

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	110,064,752 - 110,078,846 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000109037 ⟹ ENSRNOP00000089933

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	110,064,752 - 110,097,381 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000115057 ⟹ ENSRNOP00000077785

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	110,064,752 - 110,096,839 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000115080 ⟹ ENSRNOP00000095670

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	110,064,757 - 110,096,540 (-)	Ensembl

RefSeq Acc Id:

NM_001013249 ⟹ NP_001013267

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	118,943,186 - 118,975,263 (-)	NCBI
mRatBN7.2	8	110,064,751 - 110,096,829 (-)	NCBI
Rnor_6.0	8	118,160,315 - 118,192,409 (-)	NCBI
Rnor_5.0	8	117,515,769 - 117,547,561 (-)	NCBI
RGSC_v3.4	8	114,438,389 - 114,470,350 (-)	RGD
Celera	8	109,352,489 - 109,384,567 (-)	RGD

Sequence:

show sequence

CGCGGCTCATGCGCCGTGCACCGAGGCTTGTTTCACATCTGTAACAACAGGAGGCCCAGCCTCGTGATGAGGAATAGCAAGGAGAGAATTCAGCTCCAGTTCGAAAGCCTGCAAAATCTGAGCCCCTC
ACTGCTTTTATAAGGATTCCAGCTTTCTCTCCTGGCCAGAAATGTTCACCCTGGACTCATTCAGAAAAGATCGGACCCAGCACAGGCAGCGTCAATGCAAGCTTCCCCCACCCCGCCTTCCACCCATG
TGTGTCAACCCTGCCCCTGGAGGGACCATCTCTCGAGCTTCTAGGGACCTATTAAAAGAGTTTCCACAGCCTAAAAACCTTCTCAACAGCGTGATTGGAAGAGCTCTTGGCATCTCACATGCAAAAGA
CAAGCTAGTCTATGTGCACACGAATGGACCGAAGAAAAAGAAAGTCACACTGCACATAAAGTGGCCCAAGAGCGTGGAGGTGGAAGGCTATGGCAGCAAGAAGATCGATGCCGAGCGGCAGGCGGCGG
CGGCAGCCTGCCAACTCTTCAAGGGCTGGGGTCTCCTGGGTCCACGGAATGAGCTGTTTGATGCAGCCAAATATCGAGTGCTAGCTGATCGTTTTGGATCTCCAGCTGACAGCTGGTGGCGCCCAGAA
CCCACCATGCCTCCAACTTCCTGGCGGCAGCTGAATCCTGAGAACATACGGCCAGCGGGTACTGGAGGACTGTCCCGATCCTTAGGCCGAGAGGAAGAGGAGGATGAGGAGGAAGAGCTAGAAGAGGG
GACCATTGATGTGACGGAGTTTTTGTCCATGACCCAGCAAGACTCCCACAACCCACTCAGGGACTCAAGGGGGGGCTCCTTTGAAATGACAGATGATGACAGTGCTATTAGAGCTCTGACCCAGTTTC
CACTTCCCAAGAACCTTCTGGCCAAAGTGATTCAGATTGCAACATCTTCCTCCACAGCTAAGAACCTCATGCAGTTCCATACTGTGGGTACCAAGACCAAGCTGGCTACACTCACTCTGCTCTGGCCC
TGTCCCATGACCTTTGTCGCCAAAGGGCGCCGCAAAGCTGAGGCTGAGAATAAGGCAGCAGCCTTGGCTTGCAAGAAACTGAAGAGCCTGGGCCTTGTGGACAGAAACAATGAGCCACTTACCCATGC
CATGTACAACCTGGCTTCCCTGCGTGAGTTGGGTGAGACCCAGCGCCGGCCATGTACCATCCAGGTGCCTGAGCCCATCCTTCGCAAGATAGAGGCCTTCCTGAGTCATTACCCGGTGGACAGTTCAT
GGATTTCCCCAGAACTCCGGCTGCAGAGTGATGACATCTTGCCCTTAGGCAAGGACTCAGGGCCCTTGAGTGACCCTATCACAGGCAAGCCATACATGCCCCTGTCAGAAGCAGAGGAGGTGCGCCTG
AGCCAGAGCCTGCTAGAGCTGTGGCGGAGGAGAGGGCCAATCTGGCAGGAGGCCCCCCAGCTACCTGTGGACCCTCATCGGGACACTATCCTCAGTGCCATTGAACAACACCCAGTGGTAGTCATCTC
TGGGGACACAGGCTGTGGGAAGACCACGCGTATCCCTCAGCTGCTATTGGAGCGCTATGTGACTGAGGGTCGAGGTGCCCGCTGCAATGTGATCATCACACAACCTCGCCGAATCTCAGCTGTGTCTG
TGGCCCAGCGGGTCAGCCATGAACTGGGACCCTCCTTGCGCCGGAATGTGGGCTTCCAGGTACGCTTGGAAAGCAAGCCTCCAGCCCGAGGTGGGGCGCTGCTCTTCTGCACTGTGGGTATCCTGCTT
CGAAAGCTGCAGAGCAACCCCAGCCTGGAGGGTGTGAGCCACGTCATTGTGGATGAGGTCCATGAGCGGGATGTGAACACAGACTTCCTGCTGATTCTGCTCAAGGGCCTGCAGCGGCTCAACCCAGC
CCTTCGGCTGGTGCTCATGAGTGCTACAGGAGATAATGAGCGCTTTTCCCGGTACTTTGGGGGCTGCCCTGTCATCAAGGTACCTGGCTTCATGTATCCTGTCAAGGAACACTACCTAGAGGACATCT
TGGCCAAGCTGGGTAAACACCAGTACCCACACCGGCACCGGCACCATGAGTCTGAAGATGAGTGTGCACTTGATTTGGACCTTGTGACTGATCTGGTTCTGCACATCGATGCCCGTGGGGAACCAGGT
GGGATCCTGTGCTTTCTGCCTGGTTGGCAAGAAATCAAAGGAGTGCAACAGCGGCTGCAGGAAGCCCTGGGCATGCATGAGAGCAAGTACCTTATCCTACCAGTGCACTCCAATATCCCCATGATGGA
CCAGAAGGCCATATTCCAACAGCCTCCACTTGGGGTGCGCAAGATTGTATTGGCCACCAACATTGCTGAAACCTCCATCACAGTTAACGACATCGTGCATGTCGTGGACAGCGGTCTGCACAAAGAAG
AACGCTATGACCTGAAGACCAAGGTGTCCTGCCTGGAGACCGTGTGGGTGTCGAGAGCAAATGTGATTCAGCGCCGGGGCAGGGCAGGCCGCTGCCAGTCAGGTTTTGCCTACCACTTGTTCCCGAGG
AGCCGGCTGGAGAAAATGGTTCCTTTCCAAGTGCCAGAGATCCTGCGCACACCTCTTGAGAACCTGGTGCTGCAAGCCAAAATCCACATGCCTGAGAAGACGGCAGTGGAGTTCCTCTCTAAGGCTGT
GGACAGTCCAAATATCAAGGCAGTGGATGAGGCCGTGATACTGCTCCAGGAGATTGGGGTGCTGGACCAGCGGGAGTACCTGACTACCTTGGGGCAGCGCCTGGCCCACATCTCTACTGATCCCCGAC
TGGCCAAGGCCATAGTGTTGGCTGCCATCTTCCGTTGCCTGCACCCACTGCTGGTGGTTGTTTCCTGCCTTACCCGGGACCCCTTCAGCAGCAGTTTGCAGAACCGGGCAGAGGTAGACAAGGTGAAG
GCATTGCTGAGCCATGACAGTGGCAGTGACCATTTGGCCTTCGTGCGGGCTGTGGCTGGCTGGGAGGAGGTACTGCGCTGGCAGGACCGTACCTCCAGGGAAAACTACCTGGAAGAAAACCTTCTGTA
TGCCCCCAGCTTGCGCTTCATCCACGGGCTCATCAAGCAGTTCTCAGAGAATATTTACGAGGCCTTCCTAGTGGGAAAGCCCTCTGACTGCACACTGCCCTCTGCTCAGTGCAATGAGTACAGCGAGG
AAGAGGAGCTGGTGAAGGGTGTGCTGATGGCTGGCCTCTACCCCAACCTCATCCAGGTGAGGCAAGGTAAGGTTACTCGGCAAGGCAAGTTCAAACCCAACAGTGTCACTTACAGGACCAAATCTGGC
AACATCTTGCTGCACAAGTCAACCATTAACAGGGAGGCCACCCGGTTACGGAGCCGATGGCTGACATATTTCATGGCCGTCAAGTCCAATGGTAGCGTCTTTGTTCGAGATTCTTCCCAGGTGCACCC
ACTAGCTGTGTTGCTCCTAACAGATGGGGACGTGCACATTCGAGATGACGGACGTCGGGCCACCATTTCACTGAGTGACAGTGACCTGCTGCGGCTGGAAGGTGATTCACGAACTGTGCGGTTGCTAA
GGGAGCTTCGGCGGGCCCTAGGAAGGATGGTGGAGCGGAGCCTCCGCAGCGAGCTGGCTGCACTTCCTCTTAGTGTGCAGCAAGAACACGGGCAGCTGCTTGCACTGCTGGCAGAGCTACTGCGGGGA
CCTTGTGGCAGCTTTGACGTGCGCAAGACAGCTGATGACTGAGCCCCTCTTCCGCTGGGGCTATGTACAGAGTGCAAATGTTTATTTAAAATAAAGTTATATTTATCCCTTGTGAAAAAAAAAAAAAA
AAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006243826 ⟹ XP_006243888

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	118,943,186 - 118,965,107 (-)	NCBI
mRatBN7.2	8	110,064,751 - 110,082,034 (-)	NCBI
Rnor_6.0	8	118,160,315 - 118,177,589 (-)	NCBI
Rnor_5.0	8	117,515,769 - 117,547,561 (-)	NCBI

Sequence:

show sequence

TTTTTTTTTTGTTGCATTGTATAACCCACATCAGCCTGGAGCTTCCCGTGGAGACCAGGCTGGA
CTTGAACGTGTAGCAGGCCTACCTCTGCATGTGAGTGCGGGTTTCAGCAGGGCCCACCACTCGTCTGGTTTTCCTATGGACCTTGGCAGTCCTGCTACTCAATCTCACAGCACACAGAGATCCACCTC
CCTCTGCCTACCTAGGGCCGGGTTTAAAGGTTTGACCACCACAACCAGCTTAGTAATGTACTTTATTTATTTGATTTTTGATTTTTTGAAACAGGGTTTCTCTGTGTAGTCCTGGCTGTCCTCCAACT
CACTTTATAGACCAGGCTGGCATCAAACTCAGATGCCTCTGCCTTAAAAGTGTTAGAATTAAATGTATAAACACCATGCCTAGCAGTGATTGTTTTAATGAGCTCTCCAGAGGATTATTCAAGTCATG
GCTTGAATGAAACAAATTTCTTCTTCCCCACTTACCCAACTGCAACCCCCCCCCAGCAAAGTTTTCTCCCAACGTCCTGCGACTTTGATGCCCACTCTCCACATAGCCACTGCTTTCAGATCTAATTT
CATTCCCAGCCCTCCAAGTCCTCAAAAGCCTTAAGAGACAGAAGAGGAATAAAATCCAGGCATATTAGTTTGGAAGTGGCATTGCAGTCTTCACACAAGTGAGGAACAGCAGAACTGCACTCTTAACT
GTGGAGTCAGCTCAGTTCTTGGCACAGTGCCCAAGTGCTTTCTCCCTTGACTCCATTCTAGGAGATAAAATCAGTTGATATTTGAGAGGTCTTCCCTGTTCTAGAGTCTTCAGGATTACCTATAGGAA
GGAGATGGGTGCCCTGCTTACACTGTATCTACATCCAAGCCAGGCGTTATGAAGCAGCCTGTAAGGAGTTTACCATGTGTAGGACCTGGAGGGAACTTGGCTCGGTTCCTTGAGTGGACGTTGAGCAA
ATGCCTAGCGCTATTTTCTAAGATTATCCTGTTCCCTCTCTTGGTTGAGATCCAGATGCCTAGTCTGGTTTGCATTTCCAGGCGAGGAGGCTCAGGCTGTGGGATGCATCTAGCTGCATCCTAGCTTC
CTTGCTCTCAGGTCGGCACCGAGTCCCCCTGGCCAGCAGAGGGCGTACGGTACTGCTACCGGTTGCTGAGCCCTCGAAGGTACTGTCGCGGTCTAGGGCCGCGGGGACTGGTGGGATCGCGATGGCGG
CTGCCAGGCGGCTCATGGCGCTGGCTGCCGGCGTCTCTCCGCGCCTCCGGCCGCCGGATCCCCGCGCTGCCGGGCGACAAGGATGCTCGCGCGGCTTCTCATCAAGCTTTGTCCGCCCCGATGGCACT
CAGGAAGCTGCCGAGGTCGAATCAGAGGTGGCCCCTAGCGAACCTGGGGAGGGTGACGGAAGCATGGTGAACGCTTCTAGGGACCTATTAAAAGAGTTTCCACAGCCTAAAAACCTTCTCAACAGCGT
GATTGGAAGAGCTCTTGGCATCTCACATGCAAAAGACAAGCTAGTCTATGTGCACACGAATGGACCGAAGAAAAAGAAAGTCACACTGCACATAAAGTGGCCCAAGAGCGTGGAGGTGGAAGGCTATG
GCAGCAAGAAGATCGATGCCGAGCGGCAGGCGGCGGCGGCAGCCTGCCAACTCTTCAAGGGCTGGGGTCTCCTGGGTCCACGGAATGAGCTGTTTGATGCAGCCAAATATCGAGTGCTAGCTGATCGT
TTTGGATCTCCAGCTGACAGCTGGTGGCGCCCAGAACCCACCATGCCTCCAACTTCCTGGCGGCAGCTGAATCCTGAGAACATACGGCCAGCGGGTACTGGAGGACTGTCCCGATCCTTAGGCCGAGA
GGAAGAGGAGGATGAGGAGGAAGAGCTAGAAGAGGGGACCATTGATGTGACGGAGTTTTTGTCCATGACCCAGCAAGACTCCCACAACCCACTCAGGGACTCAAGGGGGGGCTCCTTTGAAATGACAG
ATGATGACAGTGCTATTAGAGCTCTGACCCAGTTTCCACTTCCCAAGAACCTTCTGGCCAAAGTGATTCAGATTGCAACATCTTCCTCCACAGCTAAGAACCTCATGCAGTTCCATACTGTGGGTACC
AAGACCAAGCTGGCTACACTCACTCTGCTCTGGCCCTGTCCCATGACCTTTGTCGCCAAAGGGCGCCGCAAAGCTGAGGCTGAGAATAAGGCAGCAGCCTTGGCTTGCAAGAAACTGAAGAGCCTGGG
CCTTGTGGACAGAAACAATGAGCCACTTACCCATGCCATGTACAACCTGGCTTCCCTGCGTGAGTTGGGTGAGACCCAGCGCCGGCCATGTACCATCCAGGTGCCTGAGCCCATCCTTCGCAAGATAG
AGGCCTTCCTGAGTCATTACCCGGTGGACAGTTCATGGATTTCCCCAGAACTCCGGCTGCAGAGTGATGACATCTTGCCCTTAGGCAAGGACTCAGGGCCCTTGAGTGACCCTATCACAGGCAAGCCA
TACATGCCCCTGTCAGAAGCAGAGGAGGTGCGCCTGAGCCAGAGCCTGCTAGAGCTGTGGCGGAGGAGAGGGCCAATCTGGCAGGAGGCCCCCCAGCTACCTGTGGACCCTCATCGGGACACTATCCT
CAGTGCCATTGAACAACACCCAGTGGTAGTCATCTCTGGGGACACAGGCTGTGGGAAGACCACGCGTATCCCTCAGCTGCTATTGGAGCGCTATGTGACTGAGGGTCGAGGTGCCCGCTGCAATGTGA
TCATCACACAACCTCGCCGAATCTCAGCTGTGTCTGTGGCCCAGCGGGTCAGCCATGAACTGGGACCCTCCTTGCGCCGGAATGTGGGCTTCCAGGTACGCTTGGAAAGCAAGCCTCCAGCCCGAGGT
GGGGCGCTGCTCTTCTGCACTGTGGGTATCCTGCTTCGAAAGCTGCAGAGCAACCCCAGCCTGGAGGGTGTGAGCCACGTCATTGTGGATGAGGTCCATGAGCGGGATGTGAACACAGACTTCCTGCT
GATTCTGCTCAAGGGCCTGCAGCGGCTCAACCCAGCCCTTCGGCTGGTGCTCATGAGTGCTACAGGAGATAATGAGCGCTTTTCCCGGTACTTTGGGGGCTGCCCTGTCATCAAGGTACCTGGCTTCA
TGTATCCTGTCAAGGAACACTACCTAGAGGACATCTTGGCCAAGCTGGGTAAACACCAGTACCCACACCGGCACCGGCACCATGAGTCTGAAGATGAGTGTGCACTTGATTTGGACCTTGTGACTGAT
CTGGTTCTGCACATCGATGCCCGTGGGGAACCAGGTGGGATCCTGTGCTTTCTGCCTGGTTGGCAAGAAATCAAAGGAGTGCAACAGCGGCTGCAGGAAGCCCTGGGCATGCATGAGAGCAAGTACCT
TATCCTACCAGTGCACTCCAATATCCCCATGATGGACCAGAAGGCCATATTCCAACAGCCTCCACTTGGGGTGCGCAAGATTGTATTGGCCACCAACATTGCTGAAACCTCCATCACAGTTAACGACA
TCGTGCATGTCGTGGACAGCGGTCTGCACAAAGAAGAACGCTATGACCTGAAGACCAAGGTGTCCTGCCTGGAGACCGTGTGGGTGTCGAGAGCAAATGTGATTCAGCGCCGGGGCAGGGCAGGCCGC
TGCCAGTCAGGTTTTGCCTACCACTTGTTCCCGAGGAGCCGGCTGGAGAAAATGGTTCCTTTCCAAGTGCCAGAGATCCTGCGCACACCTCTTGAGAACCTGGTGCTGCAAGCCAAAATCCACATGCC
TGAGAAGACGGCAGTGGAGTTCCTCTCTAAGGCTGTGGACAGTCCAAATATCAAGGCAGTGGATGAGGCCGTGATACTGCTCCAGGAGATTGGGGTGCTGGACCAGCGGGAGTACCTGACTACCTTGG
GGCAGCGCCTGGCCCACATCTCTACTGATCCCCGACTGGCCAAGGCCATAGTGTTGGCTGCCATCTTCCGTTGCCTGCACCCACTGCTGGTGGTTGTTTCCTGCCTTACCCGGGACCCCTTCAGCAGC
AGTTTGCAGAACCGGGCAGAGGTAGACAAGGTGAAGGCATTGCTGAGCCATGACAGTGGCAGTGACCATTTGGCCTTCGTGCGGGCTGTGGCTGGCTGGGAGGAGGTACTGCGCTGGCAGGACCGTAC
CTCCAGGGAAAACTACCTGGAAGAAAACCTTCTGTATGCCCCCAGCTTGCGCTTCATCCACGGGCTCATCAAGCAGTTCTCAGAGAATATTTACGAGGCCTTCCTAGTGGGAAAGCCCTCTGACTGCA
CACTGCCCTCTGCTCAGTGCAATGAGTACAGCGAGGAAGAGGAGCTGGTGAAGGGTGTGCTGATGGCTGGCCTCTACCCCAACCTCATCCAGGTGAGGCAAGGTAAGGTTACTCGGCAAGGCAAGTTC
AAACCCAACAGTGTCACTTACAGGACCAAATCTGGCAACATCTTGCTGCACAAGTCAACCATTAACAGGGAGGCCACCCGGTTACGGAGCCGATGGCTGACATATTTCATGGCCGTCAAGTCCAATGG
TAGCGTCTTTGTTCGAGATTCTTCCCAGGTGCACCCACTAGCTGTGTTGCTCCTAACAGATGGGGACGTGCACATTCGAGATGACGGACGTCGGGCCACCATTTCACTGAGTGACAGTGACCTGCTGC
GGCTGGAAGGTGATTCACGAACTGTGCGGTTGCTAAGGGAGCTTCGGCGGGCCCTAGGAAGGATGGTGGAGCGGAGCCTCCGCAGCGAGCTGGCTGCACTTCCTCTTAGTGTGCAGCAAGAACACGGG
CAGCTGCTTGCACTGCTGGCAGAGCTACTGCGGGGACCTTGTGGCAGCTTTGACGTGCGCAAGACAGCTGATGACTGAGCCCCTCTTCCGCTGGGGCTATGTACAGAGTGCAAATGTTTATTTAAAAT
AAAGTTATATTTATCCCTTGTGA

hide sequence

RefSeq Acc Id:

XM_006243829 ⟹ XP_006243891

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	118,943,186 - 118,965,109 (-)	NCBI
mRatBN7.2	8	110,064,751 - 110,082,034 (-)	NCBI
Rnor_6.0	8	118,160,315 - 118,177,589 (-)	NCBI
Rnor_5.0	8	117,515,769 - 117,547,561 (-)	NCBI

Sequence:

show sequence

TTTTTTTTTTGTTGCATTGTATAACCCACATCAGCCTGGAGCTTCCCGTGGAGACCAGGCTGGA
CTTGAACGTGTAGCAGGCCTACCTCTGCATGTGAGTGCGGGTTTCAGCAGGGCCCACCACTCGTCTGGTTTTCCTATGGACCTTGGCAGTCCTGCTACTCAATCTCACAGCACACAGAGATCCACCTC
CCTCTGCCTACCTAGGGCCGGGTTTAAAGGTTTGACCACCACAACCAGCTTAGTAATGTACTTTATTTATTTGATTTTTGATTTTTTGAAACAGGGTTTCTCTGTGTAGTCCTGGCTGTCCTCCAACT
CACTTTATAGACCAGGCTGGCATCAAACTCAGATGCCTCTGCCTTAAAAGTGTTAGAATTAAATGTATAAACACCATGCCTAGCAGTGATTGTTTTAATGAGCTCTCCAGAGGATTATTCAAGTCATG
GCTTGAATGAAACAAATTTCTTCTTCCCCACTTACCCAACTGCAACCCCCCCCCAGCAAAGTTTTCTCCCAACGTCCTGCGACTTTGATGCCCACTCTCCACATAGCCACTGCTTTCAGATCTAATTT
CATTCCCAGCCCTCCAAGTCCTCAAAAGCCTTAAGAGACAGAAGAGGAATAAAATCCAGGCATATTAGTTTGGAAGTGGCATTGCAGTCTTCACACAAGTGAGGAACAGCAGAACTGCACTCTTAACT
GTGGAGTCAGCTCAGTTCTTGGCACAGTGCCCAAGTGCTTTCTCCCTTGACTCCATTCTAGGAGATAAAATCAGTTGATATTTGAGAGGTCTTCCCTGTTCTAGAGTCTTCAGGATTACCTATAGGAA
GGAGATGGGTGCCCTGCTTACACTGTATCTACATCCAAGCCAGGCGTTATGAAGCAGCCTGTAAGGAGTTTACCATGTGTAGGACCTGGAGGGAACTTGGCTCGGTTCCTTGAGTGGACGTTGAGCAA
ATGCCTAGCGCTATTTTCTAAGATTATCCTGTTCCCTCTCTTGGTTGAGATCCAGATGCCTAGTCTGGTTTGCATTTCCAGGCGAGGAGGCTCAGGCTGTGGGATGCATCTAGCTGCATCCTAGCTTC
CTTGCTCTCAGGTCGGCACCGAGTCCCCCTGGCCAGCAGAGGGCGTACGGTACTGCTACCGGTTGCTGAGCCCTCGAAGGTACTGTCGCGGTCTAGGGCCGCGGGGACTGGTGGGATCGCGATGGCGG
CTGCCAGGCGGCTCATGGCGCTGGCTGCCGGCGTCTCTCCGCGCCTCCGGCCGCCGGATCCCCGCGCTGCCGGGCGACAAGGATGCTCGCGCGGCTTCTCATCAAGCTTTGTCCGCCCCGATGGCACT
CAGGAAGCTGCCGAGGTCGAATCAGAGGTGGCCCCTAGCGAACCTGGGGAGGGTGACGGAAGCATGGTGAACGCTTCTAGGGACCTATTAAAAGAGTTTCCACAGCCTAAAAACCTTCTCAACAGCGT
GATTGGAAGAGCTCTTGGCATCTCACATGCAAAAGACAAGCTAGTCTATGTGCACACGAATGGACCGAAGAAAAAGGGCTGGGGTCTCCTGGGTCCACGGAATGAGCTGTTTGATGCAGCCAAATATC
GAGTGCTAGCTGATCGTTTTGGATCTCCAGCTGACAGCTGGTGGCGCCCAGAACCCACCATGCCTCCAACTTCCTGGCGGCAGCTGAATCCTGAGAACATACGGCCAGCGGGTACTGGAGGACTGTCC
CGATCCTTAGGCCGAGAGGAAGAGGAGGATGAGGAGGAAGAGCTAGAAGAGGGGACCATTGATGTGACGGAGTTTTTGTCCATGACCCAGCAAGACTCCCACAACCCACTCAGGGACTCAAGGGGGGG
CTCCTTTGAAATGACAGATGATGACAGTGCTATTAGAGCTCTGACCCAGTTTCCACTTCCCAAGAACCTTCTGGCCAAAGTGATTCAGATTGCAACATCTTCCTCCACAGCTAAGAACCTCATGCAGT
TCCATACTGTGGGTACCAAGACCAAGCTGGCTACACTCACTCTGCTCTGGCCCTGTCCCATGACCTTTGTCGCCAAAGGGCGCCGCAAAGCTGAGGCTGAGAATAAGGCAGCAGCCTTGGCTTGCAAG
AAACTGAAGAGCCTGGGCCTTGTGGACAGAAACAATGAGCCACTTACCCATGCCATGTACAACCTGGCTTCCCTGCGTGAGTTGGGTGAGACCCAGCGCCGGCCATGTACCATCCAGGTGCCTGAGCC
CATCCTTCGCAAGATAGAGGCCTTCCTGAGTCATTACCCGGTGGACAGTTCATGGATTTCCCCAGAACTCCGGCTGCAGAGTGATGACATCTTGCCCTTAGGCAAGGACTCAGGGCCCTTGAGTGACC
CTATCACAGGCAAGCCATACATGCCCCTGTCAGAAGCAGAGGAGGTGCGCCTGAGCCAGAGCCTGCTAGAGCTGTGGCGGAGGAGAGGGCCAATCTGGCAGGAGGCCCCCCAGCTACCTGTGGACCCT
CATCGGGACACTATCCTCAGTGCCATTGAACAACACCCAGTGGTAGTCATCTCTGGGGACACAGGCTGTGGGAAGACCACGCGTATCCCTCAGCTGCTATTGGAGCGCTATGTGACTGAGGGTCGAGG
TGCCCGCTGCAATGTGATCATCACACAACCTCGCCGAATCTCAGCTGTGTCTGTGGCCCAGCGGGTCAGCCATGAACTGGGACCCTCCTTGCGCCGGAATGTGGGCTTCCAGGTACGCTTGGAAAGCA
AGCCTCCAGCCCGAGGTGGGGCGCTGCTCTTCTGCACTGTGGGTATCCTGCTTCGAAAGCTGCAGAGCAACCCCAGCCTGGAGGGTGTGAGCCACGTCATTGTGGATGAGGTCCATGAGCGGGATGTG
AACACAGACTTCCTGCTGATTCTGCTCAAGGGCCTGCAGCGGCTCAACCCAGCCCTTCGGCTGGTGCTCATGAGTGCTACAGGAGATAATGAGCGCTTTTCCCGGTACTTTGGGGGCTGCCCTGTCAT
CAAGGTACCTGGCTTCATGTATCCTGTCAAGGAACACTACCTAGAGGACATCTTGGCCAAGCTGGGTAAACACCAGTACCCACACCGGCACCGGCACCATGAGTCTGAAGATGAGTGTGCACTTGATT
TGGACCTTGTGACTGATCTGGTTCTGCACATCGATGCCCGTGGGGAACCAGGTGGGATCCTGTGCTTTCTGCCTGGTTGGCAAGAAATCAAAGGAGTGCAACAGCGGCTGCAGGAAGCCCTGGGCATG
CATGAGAGCAAGTACCTTATCCTACCAGTGCACTCCAATATCCCCATGATGGACCAGAAGGCCATATTCCAACAGCCTCCACTTGGGGTGCGCAAGATTGTATTGGCCACCAACATTGCTGAAACCTC
CATCACAGTTAACGACATCGTGCATGTCGTGGACAGCGGTCTGCACAAAGAAGAACGCTATGACCTGAAGACCAAGGTGTCCTGCCTGGAGACCGTGTGGGTGTCGAGAGCAAATGTGATTCAGCGCC
GGGGCAGGGCAGGCCGCTGCCAGTCAGGTTTTGCCTACCACTTGTTCCCGAGGAGCCGGCTGGAGAAAATGGTTCCTTTCCAAGTGCCAGAGATCCTGCGCACACCTCTTGAGAACCTGGTGCTGCAA
GCCAAAATCCACATGCCTGAGAAGACGGCAGTGGAGTTCCTCTCTAAGGCTGTGGACAGTCCAAATATCAAGGCAGTGGATGAGGCCGTGATACTGCTCCAGGAGATTGGGGTGCTGGACCAGCGGGA
GTACCTGACTACCTTGGGGCAGCGCCTGGCCCACATCTCTACTGATCCCCGACTGGCCAAGGCCATAGTGTTGGCTGCCATCTTCCGTTGCCTGCACCCACTGCTGGTGGTTGTTTCCTGCCTTACCC
GGGACCCCTTCAGCAGCAGTTTGCAGAACCGGGCAGAGGTAGACAAGGTGAAGGCATTGCTGAGCCATGACAGTGGCAGTGACCATTTGGCCTTCGTGCGGGCTGTGGCTGGCTGGGAGGAGGTACTG
CGCTGGCAGGACCGTACCTCCAGGGAAAACTACCTGGAAGAAAACCTTCTGTATGCCCCCAGCTTGCGCTTCATCCACGGGCTCATCAAGCAGTTCTCAGAGAATATTTACGAGGCCTTCCTAGTGGG
AAAGCCCTCTGACTGCACACTGCCCTCTGCTCAGTGCAATGAGTACAGCGAGGAAGAGGAGCTGGTGAAGGGTGTGCTGATGGCTGGCCTCTACCCCAACCTCATCCAGGTGAGGCAAGGTAAGGTTA
CTCGGCAAGGCAAGTTCAAACCCAACAGTGTCACTTACAGGACCAAATCTGGCAACATCTTGCTGCACAAGTCAACCATTAACAGGGAGGCCACCCGGTTACGGAGCCGATGGCTGACATATTTCATG
GCCGTCAAGTCCAATGGTAGCGTCTTTGTTCGAGATTCTTCCCAGGTGCACCCACTAGCTGTGTTGCTCCTAACAGATGGGGACGTGCACATTCGAGATGACGGACGTCGGGCCACCATTTCACTGAG
TGACAGTGACCTGCTGCGGCTGGAAGGTGATTCACGAACTGTGCGGTTGCTAAGGGAGCTTCGGCGGGCCCTAGGAAGGATGGTGGAGCGGAGCCTCCGCAGCGAGCTGGCTGCACTTCCTCTTAGTG
TGCAGCAAGAACACGGGCAGCTGCTTGCACTGCTGGCAGAGCTACTGCGGGGACCTTGTGGCAGCTTTGACGTGCGCAAGACAGCTGATGACTGAGCCCCTCTTCCGCTGGGGCTATGTACAGAGTGC
AAATGTTTATTTAAAATAAAGTTATATTTATCCCTTGTGA

hide sequence

RefSeq Acc Id:

XM_006243831 ⟹ XP_006243893

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	118,943,186 - 118,975,319 (-)	NCBI
mRatBN7.2	8	110,064,751 - 110,096,954 (-)	NCBI
Rnor_6.0	8	118,160,315 - 118,192,457 (-)	NCBI
Rnor_5.0	8	117,515,769 - 117,547,561 (-)	NCBI

Sequence:

show sequence

CGCGCCGTCGCTGGTGGGAGTTGTAGTCCGGCCGTAGTTGGGGGGGCCCGCGGCTCATGCGCCG
TGCACCGAGGCTTGTTTCACATCTGTAACAACAGGAGGCCCAGCCTCGTGATGAGGAATAGCAAGGAGAGAATTCAGCTCCAGTTCGAAAGCCTGCAAAATCTGAGCCCCTCACTGCTTTTATAAGGA
TTCCAGCTTTCTCTCCTGGCCAGAAATGTTCACCCTGGACTCATTCAGAAAAGATCGGACCCAGCACAGGCAGCGTCAATGCAAGCTTCCCCCACCCCGCCTTCCACCCATGTGTGTCAACCCTGCCC
CTGGAGGGACCATCTCTCGAGCTTCTAGGGACCTATTAAAAGAGTTTCCACAGCCTAAAAACCTTCTCAACAGCGTGATTGGAAGAGCTCTTGGCATCTCACATGCAAAAGACAAGCTAGTCTATGTG
CACACGAATGGACCGAAGAAAAAGGGCTGGGGTCTCCTGGGTCCACGGAATGAGCTGTTTGATGCAGCCAAATATCGAGTGCTAGCTGATCGTTTTGGATCTCCAGCTGACAGCTGGTGGCGCCCAGA
ACCCACCATGCCTCCAACTTCCTGGCGGCAGCTGAATCCTGAGAACATACGGCCAGCGGGTACTGGAGGACTGTCCCGATCCTTAGGCCGAGAGGAAGAGGAGGATGAGGAGGAAGAGCTAGAAGAGG
GGACCATTGATGTGACGGAGTTTTTGTCCATGACCCAGCAAGACTCCCACAACCCACTCAGGGACTCAAGGGGGGGCTCCTTTGAAATGACAGATGATGACAGTGCTATTAGAGCTCTGACCCAGTTT
CCACTTCCCAAGAACCTTCTGGCCAAAGTGATTCAGATTGCAACATCTTCCTCCACAGCTAAGAACCTCATGCAGTTCCATACTGTGGGTACCAAGACCAAGCTGGCTACACTCACTCTGCTCTGGCC
CTGTCCCATGACCTTTGTCGCCAAAGGGCGCCGCAAAGCTGAGGCTGAGAATAAGGCAGCAGCCTTGGCTTGCAAGAAACTGAAGAGCCTGGGCCTTGTGGACAGAAACAATGAGCCACTTACCCATG
CCATGTACAACCTGGCTTCCCTGCGTGAGTTGGGTGAGACCCAGCGCCGGCCATGTACCATCCAGGTGCCTGAGCCCATCCTTCGCAAGATAGAGGCCTTCCTGAGTCATTACCCGGTGGACAGTTCA
TGGATTTCCCCAGAACTCCGGCTGCAGAGTGATGACATCTTGCCCTTAGGCAAGGACTCAGGGCCCTTGAGTGACCCTATCACAGGCAAGCCATACATGCCCCTGTCAGAAGCAGAGGAGGTGCGCCT
GAGCCAGAGCCTGCTAGAGCTGTGGCGGAGGAGAGGGCCAATCTGGCAGGAGGCCCCCCAGCTACCTGTGGACCCTCATCGGGACACTATCCTCAGTGCCATTGAACAACACCCAGTGGTAGTCATCT
CTGGGGACACAGGCTGTGGGAAGACCACGCGTATCCCTCAGCTGCTATTGGAGCGCTATGTGACTGAGGGTCGAGGTGCCCGCTGCAATGTGATCATCACACAACCTCGCCGAATCTCAGCTGTGTCT
GTGGCCCAGCGGGTCAGCCATGAACTGGGACCCTCCTTGCGCCGGAATGTGGGCTTCCAGGTACGCTTGGAAAGCAAGCCTCCAGCCCGAGGTGGGGCGCTGCTCTTCTGCACTGTGGGTATCCTGCT
TCGAAAGCTGCAGAGCAACCCCAGCCTGGAGGGTGTGAGCCACGTCATTGTGGATGAGGTCCATGAGCGGGATGTGAACACAGACTTCCTGCTGATTCTGCTCAAGGGCCTGCAGCGGCTCAACCCAG
CCCTTCGGCTGGTGCTCATGAGTGCTACAGGAGATAATGAGCGCTTTTCCCGGTACTTTGGGGGCTGCCCTGTCATCAAGGTACCTGGCTTCATGTATCCTGTCAAGGAACACTACCTAGAGGACATC
TTGGCCAAGCTGGGTAAACACCAGTACCCACACCGGCACCGGCACCATGAGTCTGAAGATGAGTGTGCACTTGATTTGGACCTTGTGACTGATCTGGTTCTGCACATCGATGCCCGTGGGGAACCAGG
TGGGATCCTGTGCTTTCTGCCTGGTTGGCAAGAAATCAAAGGAGTGCAACAGCGGCTGCAGGAAGCCCTGGGCATGCATGAGAGCAAGTACCTTATCCTACCAGTGCACTCCAATATCCCCATGATGG
ACCAGAAGGCCATATTCCAACAGCCTCCACTTGGGGTGCGCAAGATTGTATTGGCCACCAACATTGCTGAAACCTCCATCACAGTTAACGACATCGTGCATGTCGTGGACAGCGGTCTGCACAAAGAA
GAACGCTATGACCTGAAGACCAAGGTGTCCTGCCTGGAGACCGTGTGGGTGTCGAGAGCAAATGTGATTCAGCGCCGGGGCAGGGCAGGCCGCTGCCAGTCAGGTTTTGCCTACCACTTGTTCCCGAG
GAGCCGGCTGGAGAAAATGGTTCCTTTCCAAGTGCCAGAGATCCTGCGCACACCTCTTGAGAACCTGGTGCTGCAAGCCAAAATCCACATGCCTGAGAAGACGGCAGTGGAGTTCCTCTCTAAGGCTG
TGGACAGTCCAAATATCAAGGCAGTGGATGAGGCCGTGATACTGCTCCAGGAGATTGGGGTGCTGGACCAGCGGGAGTACCTGACTACCTTGGGGCAGCGCCTGGCCCACATCTCTACTGATCCCCGA
CTGGCCAAGGCCATAGTGTTGGCTGCCATCTTCCGTTGCCTGCACCCACTGCTGGTGGTTGTTTCCTGCCTTACCCGGGACCCCTTCAGCAGCAGTTTGCAGAACCGGGCAGAGGTAGACAAGGTGAA
GGCATTGCTGAGCCATGACAGTGGCAGTGACCATTTGGCCTTCGTGCGGGCTGTGGCTGGCTGGGAGGAGGTACTGCGCTGGCAGGACCGTACCTCCAGGGAAAACTACCTGGAAGAAAACCTTCTGT
ATGCCCCCAGCTTGCGCTTCATCCACGGGCTCATCAAGCAGTTCTCAGAGAATATTTACGAGGCCTTCCTAGTGGGAAAGCCCTCTGACTGCACACTGCCCTCTGCTCAGTGCAATGAGTACAGCGAG
GAAGAGGAGCTGGTGAAGGGTGTGCTGATGGCTGGCCTCTACCCCAACCTCATCCAGGTGAGGCAAGGTAAGGTTACTCGGCAAGGCAAGTTCAAACCCAACAGTGTCACTTACAGGACCAAATCTGG
CAACATCTTGCTGCACAAGTCAACCATTAACAGGGAGGCCACCCGGTTACGGAGCCGATGGCTGACATATTTCATGGCCGTCAAGTCCAATGGTAGCGTCTTTGTTCGAGATTCTTCCCAGGTGCACC
CACTAGCTGTGTTGCTCCTAACAGATGGGGACGTGCACATTCGAGATGACGGACGTCGGGCCACCATTTCACTGAGTGACAGTGACCTGCTGCGGCTGGAAGGTGATTCACGAACTGTGCGGTTGCTA
AGGGAGCTTCGGCGGGCCCTAGGAAGGATGGTGGAGCGGAGCCTCCGCAGCGAGCTGGCTGCACTTCCTCTTAGTGTGCAGCAAGAACACGGGCAGCTGCTTGCACTGCTGGCAGAGCTACTGCGGGG
ACCTTGTGGCAGCTTTGACGTGCGCAAGACAGCTGATGACTGAGCCCCTCTTCCGCTGGGGCTATGTACAGAGTGCAAATGTTTATTTAAAATAAAGTTATATTTATCCCTTGTGA

hide sequence

RefSeq Acc Id:

XM_017595799 ⟹ XP_017451288

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	118,943,186 - 118,975,128 (-)	NCBI
mRatBN7.2	8	110,064,751 - 110,096,715 (-)	NCBI
Rnor_6.0	8	118,160,315 - 118,192,330 (-)	NCBI

Sequence:

show sequence

GCGCCCCTTGAAGCAGCCTGCCACGGTCGGGGGTGGTCGGCGCGAGGAGGGGTCCCGAGTCCGGCTGGCGACCTGGCGGAGAGTGGGAAGGAGGAGCTGGCGAGCCTGAGGAGCAGGCCGGGCATCCT
AGGCCTGCCCGGGAAGCCGGCCGGGCCGAGCCGTGGGCAGTCAGGCCTCGGCCTGCCGTTGCCATGGAGCCGGGGCGGGGCGGGGGCCAGACCGGTCCGCCGGGGCGGGCCTCGCTGCTAGGGGCTCC
GCGGAGGCAGAGAGAGGCGGCTTCATTGGCTCGACGACGCCTTCGCCTCAGGGGATGCTCGGTTTTCCCCTGGCTGGGCCCGGAGGAAGTCTCTCGAGTGCCCGAGACCTTTGTCTGCCCCTCCTCCC
ACTGTGCGGTCAGGACCGTTCCTCCGAAGGGAGGCCTGGTGCATTTTTTACTCTTCTGGTTTGCCTCCTTTTGCACCGACCTTGTCAGTGGGGGAGTCTAAGGGGAGGCCCAGCCTCGTGATGAGGAA
TAGCAAGGAGAGAATTCAGCTCCAGTTCGAAAGCCTGCAAAATCTGAGCCCCTCACTGCTTTTATAAGGATTCCAGCTTTCTCTCCTGGCCAGAAATGTTCACCCTGGACTCATTCAGAAAAGATCGG
ACCCAGCACAGGCAGCGTCAATGCAAGCTTCCCCCACCCCGCCTTCCACCCATGTGTGTCAACCCTGCCCCTGGAGGGACCATCTCTCGAGCTTCTAGGGACCTATTAAAAGAGTTTCCACAGCCTAA
AAACCTTCTCAACAGCGTGATTGGAAGAGCTCTTGGCATCTCACATGCAAAAGACAAGCTAGTCTATGTGCACACGAATGGACCGAAGAAAAAGAAAGTCACACTGCACATAAAGTGGCCCAAGAGCG
TGGAGGTGGAAGGCTATGGCAGCAAGAAGATCGATGCCGAGCGGCAGGCGGCGGCGGCAGCCTGCCAACTCTTCAAGGGCTGGGGTCTCCTGGGTCCACGGAATGAGCTGTTTGATGCAGCCAAATAT
CGAGTGCTAGCTGATCGTTTTGGATCTCCAGCTGACAGCTGGTGGCGCCCAGAACCCACCATGCCTCCAACTTCCTGGCGGCAGCTGAATCCTGAGAACATACGGCCAGCGGGTACTGGAGGACTGTC
CCGATCCTTAGGCCGAGAGGAAGAGGAGGATGAGGAGGAAGAGCTAGAAGAGGGGACCATTGATGTGACGGAGTTTTTGTCCATGACCCAGCAAGACTCCCACAACCCACTCAGGGACTCAAGGGGGG
GCTCCTTTGAAATGACAGATGATGACAGTGCTATTAGAGCTCTGACCCAGTTTCCACTTCCCAAGAACCTTCTGGCCAAAGTGATTCAGATTGCAACATCTTCCTCCACAGCTAAGAACCTCATGCAG
TTCCATACTGTGGGTACCAAGACCAAGCTGGCTACACTCACTCTGCTCTGGCCCTGTCCCATGACCTTTGTCGCCAAAGGGCGCCGCAAAGCTGAGGCTGAGAATAAGGCAGCAGCCTTGGCTTGCAA
GAAACTGAAGAGCCTGGGCCTTGTGGACAGAAACAATGAGCCACTTACCCATGCCATGTACAACCTGGCTTCCCTGCGTGAGTTGGGTGAGACCCAGCGCCGGCCATGTACCATCCAGGTGCCTGAGC
CCATCCTTCGCAAGATAGAGGCCTTCCTGAGTCATTACCCGGTGGACAGTTCATGGATTTCCCCAGAACTCCGGCTGCAGAGTGATGACATCTTGCCCTTAGGCAAGGACTCAGGGCCCTTGAGTGAC
CCTATCACAGGCAAGCCATACATGCCCCTGTCAGAAGCAGAGGAGGTGCGCCTGAGCCAGAGCCTGCTAGAGCTGTGGCGGAGGAGAGGGCCAATCTGGCAGGAGGCCCCCCAGCTACCTGTGGACCC
TCATCGGGACACTATCCTCAGTGCCATTGAACAACACCCAGTGGTAGTCATCTCTGGGGACACAGGCTGTGGGAAGACCACGCGTATCCCTCAGCTGCTATTGGAGCGCTATGTGACTGAGGGTCGAG
GTGCCCGCTGCAATGTGATCATCACACAACCTCGCCGAATCTCAGCTGTGTCTGTGGCCCAGCGGGTCAGCCATGAACTGGGACCCTCCTTGCGCCGGAATGTGGGCTTCCAGGTACGCTTGGAAAGC
AAGCCTCCAGCCCGAGGTGGGGCGCTGCTCTTCTGCACTGTGGGTATCCTGCTTCGAAAGCTGCAGAGCAACCCCAGCCTGGAGGGTGTGAGCCACGTCATTGTGGATGAGGTCCATGAGCGGGATGT
GAACACAGACTTCCTGCTGATTCTGCTCAAGGGCCTGCAGCGGCTCAACCCAGCCCTTCGGCTGGTGCTCATGAGTGCTACAGGAGATAATGAGCGCTTTTCCCGGTACTTTGGGGGCTGCCCTGTCA
TCAAGGTACCTGGCTTCATGTATCCTGTCAAGGAACACTACCTAGAGGACATCTTGGCCAAGCTGGGTAAACACCAGTACCCACACCGGCACCGGCACCATGAGTCTGAAGATGAGTGTGCACTTGAT
TTGGACCTTGTGACTGATCTGGTTCTGCACATCGATGCCCGTGGGGAACCAGGTGGGATCCTGTGCTTTCTGCCTGGTTGGCAAGAAATCAAAGGAGTGCAACAGCGGCTGCAGGAAGCCCTGGGCAT
GCATGAGAGCAAGTACCTTATCCTACCAGTGCACTCCAATATCCCCATGATGGACCAGAAGGCCATATTCCAACAGCCTCCACTTGGGGTGCGCAAGATTGTATTGGCCACCAACATTGCTGAAACCT
CCATCACAGTTAACGACATCGTGCATGTCGTGGACAGCGGTCTGCACAAAGAAGAACGCTATGACCTGAAGACCAAGGTGTCCTGCCTGGAGACCGTGTGGGTGTCGAGAGCAAATGTGATTCAGCGC
CGGGGCAGGGCAGGCCGCTGCCAGTCAGGTTTTGCCTACCACTTGTTCCCGAGGAGCCGGCTGGAGAAAATGGTTCCTTTCCAAGTGCCAGAGATCCTGCGCACACCTCTTGAGAACCTGGTGCTGCA
AGCCAAAATCCACATGCCTGAGAAGACGGCAGTGGAGTTCCTCTCTAAGGCTGTGGACAGTCCAAATATCAAGGCAGTGGATGAGGCCGTGATACTGCTCCAGGAGATTGGGGTGCTGGACCAGCGGG
AGTACCTGACTACCTTGGGGCAGCGCCTGGCCCACATCTCTACTGATCCCCGACTGGCCAAGGCCATAGTGTTGGCTGCCATCTTCCGTTGCCTGCACCCACTGCTGGTGGTTGTTTCCTGCCTTACC
CGGGACCCCTTCAGCAGCAGTTTGCAGAACCGGGCAGAGGTAGACAAGGTGAAGGCATTGCTGAGCCATGACAGTGGCAGTGACCATTTGGCCTTCGTGCGGGCTGTGGCTGGCTGGGAGGAGGTACT
GCGCTGGCAGGACCGTACCTCCAGGGAAAACTACCTGGAAGAAAACCTTCTGTATGCCCCCAGCTTGCGCTTCATCCACGGGCTCATCAAGCAGTTCTCAGAGAATATTTACGAGGCCTTCCTAGTGG
GAAAGCCCTCTGACTGCACACTGCCCTCTGCTCAGTGCAATGAGTACAGCGAGGAAGAGGAGCTGGTGAAGGGTGTGCTGATGGCTGGCCTCTACCCCAACCTCATCCAGGTGAGGCAAGGTAAGGTT
ACTCGGCAAGGCAAGTTCAAACCCAACAGTGTCACTTACAGGACCAAATCTGGCAACATCTTGCTGCACAAGTCAACCATTAACAGGGAGGCCACCCGGTTACGGAGCCGATGGCTGACATATTTCAT
GGCCGTCAAGTCCAATGGTAGCGTCTTTGTTCGAGATTCTTCCCAGGTGCACCCACTAGCTGTGTTGCTCCTAACAGATGGGGACGTGCACATTCGAGATGACGGACGTCGGGCCACCATTTCACTGA
GTGACAGTGACCTGCTGCGGCTGGAAGGTGATTCACGAACTGTGCGGTTGCTAAGGGAGCTTCGGCGGGCCCTAGGAAGGATGGTGGAGCGGAGCCTCCGCAGCGAGCTGGCTGCACTTCCTCTTAGT
GTGCAGCAAGAACACGGGCAGCTGCTTGCACTGCTGGCAGAGCTACTGCGGGGACCTTGTGGCAGCTTTGACGTGCGCAAGACAGCTGATGACTGAGCCCCTCTTCCGCTGGGGCTATGTACAGAGTG
CAAATGTTTATTTAAAATAAAGTTATATTTATCCCTTGTGA

hide sequence

RefSeq Acc Id:

XM_017595800 ⟹ XP_017451289

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	118,943,186 - 118,974,657 (-)	NCBI
mRatBN7.2	8	110,064,751 - 110,096,219 (-)	NCBI
Rnor_6.0	8	118,160,315 - 118,192,330 (-)	NCBI

Sequence:

show sequence

GCGCCCCTTGAAGCAGCCTGCCACGGTCGGGGGTGGTCGGCGCGAGGAGGGGTCCCGAGTCCGG
CTGGCGACCTGGCGGAGAGTGGGAAGGAGGAGCTGGCGAGCCTGAGGAGCAGGCCGGGCATCCTAGGCCTGCCCGGGAAGCCGGCCGGGCCGAGCCGTGGGCAGTCAGGCCTCGGCCTGCCGTTGCCA
TGGAGCCGGGGCGGGGCGGGGGCCAGACCGGTCCGCCGGGGCGGGCCTCGCTGCTAGGGGCTCCGCGGAGGCAGAGAGAGGCGGCTTCATTGGCTCGACGACGCCTTCGCCTCAGGGGATGCTCGGTT
TTCCCCTGGCTGGGCCCGGAGGAAGTCTCTCGAGTGCCCGAGACCTTTGTCTGCCCCTCCTCCCACTGTGCGGTCAGGACCGTTCCTCCGAAGGGAGGCCTGGTGCATTTTTTACTCTTCTGGTTTGC
CTCCTTTTGCACCGACCTTGTCAGTGGGGGAGTCTAAGGGGTGAGGTGTTCTTTGTTTGCTAGTGACTTGTCCCATTTTGCAGGGGAAGACCTAATGCATGGTGGGTCCTTTGTTTGCAGTGAAGTGG
AATCCCAGGGGTCCCGAGAACCCTCAAGCCAAGAGTACTGCATCTATGGGCTTTCTAGATAGTCCTTGTGAGGCCCAGCCTCGTGATGAGGAATAGCAAGGAGAGAATTCAGCTCCAGTTCGAAAGCC
TGCAAAATCTGAGCCCCTCACTGCTTTTATAAGGATTCCAGCTTTCTCTCCTGGCCAGAAATGTTCACCCTGGACTCATTCAGAAAAGATCGGACCCAGCACAGGCAGCGTCAATGCAAGCTTCCCCC
ACCCCGCCTTCCACCCATGTGTGTCAACCCTGCCCCTGGAGGGACCATCTCTCGAGCTTCTAGGGACCTATTAAAAGAGTTTCCACAGCCTAAAAACCTTCTCAACAGCGTGATTGGAAGAGCTCTTG
GCATCTCACATGCAAAAGACAAGCTAGTCTATGTGCACACGAATGGACCGAAGAAAAAGAAAGTCACACTGCACATAAAGTGGCCCAAGAGCGTGGAGGTGGAAGGCTATGGCAGCAAGAAGATCGAT
GCCGAGCGGCAGGCGGCGGCGGCAGCCTGCCAACTCTTCAAGGGCTGGGGTCTCCTGGGTCCACGGAATGAGCTGTTTGATGCAGCCAAATATCGAGTGCTAGCTGATCGTTTTGGATCTCCAGCTGA
CAGCTGGTGGCGCCCAGAACCCACCATGCCTCCAACTTCCTGGCGGCAGCTGAATCCTGAGAACATACGGCCAGCGGGTACTGGAGGACTGTCCCGATCCTTAGGCCGAGAGGAAGAGGAGGATGAGG
AGGAAGAGCTAGAAGAGGGGACCATTGATGTGACGGAGTTTTTGTCCATGACCCAGCAAGACTCCCACAACCCACTCAGGGACTCAAGGGGGGGCTCCTTTGAAATGACAGATGATGACAGTGCTATT
AGAGCTCTGACCCAGTTTCCACTTCCCAAGAACCTTCTGGCCAAAGTGATTCAGATTGCAACATCTTCCTCCACAGCTAAGAACCTCATGCAGTTCCATACTGTGGGTACCAAGACCAAGCTGGCTAC
ACTCACTCTGCTCTGGCCCTGTCCCATGACCTTTGTCGCCAAAGGGCGCCGCAAAGCTGAGGCTGAGAATAAGGCAGCAGCCTTGGCTTGCAAGAAACTGAAGAGCCTGGGCCTTGTGGACAGAAACA
ATGAGCCACTTACCCATGCCATGTACAACCTGGCTTCCCTGCGTGAGTTGGGTGAGACCCAGCGCCGGCCATGTACCATCCAGGTGCCTGAGCCCATCCTTCGCAAGATAGAGGCCTTCCTGAGTCAT
TACCCGGTGGACAGTTCATGGATTTCCCCAGAACTCCGGCTGCAGAGTGATGACATCTTGCCCTTAGGCAAGGACTCAGGGCCCTTGAGTGACCCTATCACAGGCAAGCCATACATGCCCCTGTCAGA
AGCAGAGGAGGTGCGCCTGAGCCAGAGCCTGCTAGAGCTGTGGCGGAGGAGAGGGCCAATCTGGCAGGAGGCCCCCCAGCTACCTGTGGACCCTCATCGGGACACTATCCTCAGTGCCATTGAACAAC
ACCCAGTGGTAGTCATCTCTGGGGACACAGGCTGTGGGAAGACCACGCGTATCCCTCAGCTGCTATTGGAGCGCTATGTGACTGAGGGTCGAGGTGCCCGCTGCAATGTGATCATCACACAACCTCGC
CGAATCTCAGCTGTGTCTGTGGCCCAGCGGGTCAGCCATGAACTGGGACCCTCCTTGCGCCGGAATGTGGGCTTCCAGGTACGCTTGGAAAGCAAGCCTCCAGCCCGAGGTGGGGCGCTGCTCTTCTG
CACTGTGGGTATCCTGCTTCGAAAGCTGCAGAGCAACCCCAGCCTGGAGGGTGTGAGCCACGTCATTGTGGATGAGGTCCATGAGCGGGATGTGAACACAGACTTCCTGCTGATTCTGCTCAAGGGCC
TGCAGCGGCTCAACCCAGCCCTTCGGCTGGTGCTCATGAGTGCTACAGGAGATAATGAGCGCTTTTCCCGGTACTTTGGGGGCTGCCCTGTCATCAAGGTACCTGGCTTCATGTATCCTGTCAAGGAA
CACTACCTAGAGGACATCTTGGCCAAGCTGGGTAAACACCAGTACCCACACCGGCACCGGCACCATGAGTCTGAAGATGAGTGTGCACTTGATTTGGACCTTGTGACTGATCTGGTTCTGCACATCGA
TGCCCGTGGGGAACCAGGTGGGATCCTGTGCTTTCTGCCTGGTTGGCAAGAAATCAAAGGAGTGCAACAGCGGCTGCAGGAAGCCCTGGGCATGCATGAGAGCAAGTACCTTATCCTACCAGTGCACT
CCAATATCCCCATGATGGACCAGAAGGCCATATTCCAACAGCCTCCACTTGGGGTGCGCAAGATTGTATTGGCCACCAACATTGCTGAAACCTCCATCACAGTTAACGACATCGTGCATGTCGTGGAC
AGCGGTCTGCACAAAGAAGAACGCTATGACCTGAAGACCAAGGTGTCCTGCCTGGAGACCGTGTGGGTGTCGAGAGCAAATGTGATTCAGCGCCGGGGCAGGGCAGGCCGCTGCCAGTCAGGTTTTGC
CTACCACTTGTTCCCGAGGAGCCGGCTGGAGAAAATGGTTCCTTTCCAAGTGCCAGAGATCCTGCGCACACCTCTTGAGAACCTGGTGCTGCAAGCCAAAATCCACATGCCTGAGAAGACGGCAGTGG
AGTTCCTCTCTAAGGCTGTGGACAGTCCAAATATCAAGGCAGTGGATGAGGCCGTGATACTGCTCCAGGAGATTGGGGTGCTGGACCAGCGGGAGTACCTGACTACCTTGGGGCAGCGCCTGGCCCAC
ATCTCTACTGATCCCCGACTGGCCAAGGCCATAGTGTTGGCTGCCATCTTCCGTTGCCTGCACCCACTGCTGGTGGTTGTTTCCTGCCTTACCCGGGACCCCTTCAGCAGCAGTTTGCAGAACCGGGC
AGAGGTAGACAAGGTGAAGGCATTGCTGAGCCATGACAGTGGCAGTGACCATTTGGCCTTCGTGCGGGCTGTGGCTGGCTGGGAGGAGGTACTGCGCTGGCAGGACCGTACCTCCAGGGAAAACTACC
TGGAAGAAAACCTTCTGTATGCCCCCAGCTTGCGCTTCATCCACGGGCTCATCAAGCAGTTCTCAGAGAATATTTACGAGGCCTTCCTAGTGGGAAAGCCCTCTGACTGCACACTGCCCTCTGCTCAG
TGCAATGAGTACAGCGAGGAAGAGGAGCTGGTGAAGGGTGTGCTGATGGCTGGCCTCTACCCCAACCTCATCCAGGTGAGGCAAGGTAAGGTTACTCGGCAAGGCAAGTTCAAACCCAACAGTGTCAC
TTACAGGACCAAATCTGGCAACATCTTGCTGCACAAGTCAACCATTAACAGGGAGGCCACCCGGTTACGGAGCCGATGGCTGACATATTTCATGGCCGTCAAGTCCAATGGTAGCGTCTTTGTTCGAG
ATTCTTCCCAGGTGCACCCACTAGCTGTGTTGCTCCTAACAGATGGGGACGTGCACATTCGAGATGACGGACGTCGGGCCACCATTTCACTGAGTGACAGTGACCTGCTGCGGCTGGAAGGTGATTCA
CGAACTGTGCGGTTGCTAAGGGAGCTTCGGCGGGCCCTAGGAAGGATGGTGGAGCGGAGCCTCCGCAGCGAGCTGGCTGCACTTCCTCTTAGTGTGCAGCAAGAACACGGGCAGCTGCTTGCACTGCT
GGCAGAGCTACTGCGGGGACCTTGTGGCAGCTTTGACGTGCGCAAGACAGCTGATGACTGAGCCCCTCTTCCGCTGGGGCTATGTACAGAGTGCAAATGTTTATTTAAAATAAAGTTATATTTATCCC
TTGTGA

hide sequence

RefSeq Acc Id:

XM_063265938 ⟹ XP_063122008

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	118,943,186 - 118,970,672 (-)	NCBI


Protein RefSeqs	NP_001013267	(Get FASTA)	NCBI Sequence Viewer
	XP_006243888	(Get FASTA)	NCBI Sequence Viewer
	XP_006243891	(Get FASTA)	NCBI Sequence Viewer
	XP_006243893	(Get FASTA)	NCBI Sequence Viewer
	XP_017451288	(Get FASTA)	NCBI Sequence Viewer
	XP_017451289	(Get FASTA)	NCBI Sequence Viewer
	XP_063122008	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH91359	(Get FASTA)	NCBI Sequence Viewer
	EDL77095	(Get FASTA)	NCBI Sequence Viewer
	EDL77096	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000043896
	ENSRNOP00000069744
	ENSRNOP00000089933
GenBank Protein	Q5BJS0	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001013267 ⟸ NM_001013249

- UniProtKB:

Q5BJS0 (UniProtKB/Swiss-Prot), A0A8I5YC14 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFTLDSFRKDRTQHRQRQCKLPPPRLPPMCVNPAPGGTISRASRDLLKEFPQPKNLLNSVIGRALGISHAKDKLVYVHTNGPKKKKVTLHIKWPKSVEVEGYGSKKIDAERQAAAAACQLFKGWGLLG
PRNELFDAAKYRVLADRFGSPADSWWRPEPTMPPTSWRQLNPENIRPAGTGGLSRSLGREEEEDEEEELEEGTIDVTEFLSMTQQDSHNPLRDSRGGSFEMTDDDSAIRALTQFPLPKNLLAKVIQIA
TSSSTAKNLMQFHTVGTKTKLATLTLLWPCPMTFVAKGRRKAEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRPCTIQVPEPILRKIEAFLSHYPVDSSWISPELRLQSDDIL
PLGKDSGPLSDPITGKPYMPLSEAEEVRLSQSLLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLR
RNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHR
HHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET
VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCL
HPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLY
PNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLRELRRALGRMVERS
LRSELAALPLSVQQEHGQLLALLAELLRGPCGSFDVRKTADD

hide sequence

RefSeq Acc Id:	XP_006243893 ⟸ XM_006243831
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6ARW5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFTLDSFRKDRTQHRQRQCKLPPPRLPPMCVNPAPGGTISRASRDLLKEFPQPKNLLNSVIGRA LGISHAKDKLVYVHTNGPKKKGWGLLGPRNELFDAAKYRVLADRFGSPADSWWRPEPTMPPTSWRQLNPENIRPAGTGGLSRSLGREEEEDEEEELEEGTIDVTEFLSMTQQDSHNPLRDSRGGSFEM TDDDSAIRALTQFPLPKNLLAKVIQIATSSSTAKNLMQFHTVGTKTKLATLTLLWPCPMTFVAKGRRKAEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRPCTIQVPEPILRK IEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSEAEEVRLSQSLLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCN VIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG FMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVN DIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTT LGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSD CTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDL LRLEGDSRTVRLLRELRRALGRMVERSLRSELAALPLSVQQEHGQLLALLAELLRGPCGSFDVRKTADD hide sequence

RefSeq Acc Id:	XP_006243891 ⟸ XM_006243829
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I5YC14 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAARRLMALAAGVSPRLRPPDPRAAGRQGCSRGFSSSFVRPDGTQEAAEVESEVAPSEPGEGDGSMVNASRDLLKEFPQPKNLLNSVIGRALGISHAKDKLVYVHTNGPKKKGWGLLGPRNELFDAA KYRVLADRFGSPADSWWRPEPTMPPTSWRQLNPENIRPAGTGGLSRSLGREEEEDEEEELEEGTIDVTEFLSMTQQDSHNPLRDSRGGSFEMTDDDSAIRALTQFPLPKNLLAKVIQIATSSSTAKNL MQFHTVGTKTKLATLTLLWPCPMTFVAKGRRKAEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRPCTIQVPEPILRKIEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPL SDPITGKPYMPLSEAEEVRLSQSLLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRL ESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECA LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVI QRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSC LTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQG KVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLRELRRALGRMVERSLRSELAALP LSVQQEHGQLLALLAELLRGPCGSFDVRKTADD hide sequence

RefSeq Acc Id:	XP_006243888 ⟸ XM_006243826
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2QL99 (UniProtKB/TrEMBL), A6I3D1 (UniProtKB/TrEMBL), A0A8I5YC14 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAARRLMALAAGVSPRLRPPDPRAAGRQGCSRGFSSSFVRPDGTQEAAEVESEVAPSEPGEGD GSMVNASRDLLKEFPQPKNLLNSVIGRALGISHAKDKLVYVHTNGPKKKKVTLHIKWPKSVEVEGYGSKKIDAERQAAAAACQLFKGWGLLGPRNELFDAAKYRVLADRFGSPADSWWRPEPTMPPTS WRQLNPENIRPAGTGGLSRSLGREEEEDEEEELEEGTIDVTEFLSMTQQDSHNPLRDSRGGSFEMTDDDSAIRALTQFPLPKNLLAKVIQIATSSSTAKNLMQFHTVGTKTKLATLTLLWPCPMTFVA KGRRKAEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRPCTIQVPEPILRKIEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSEAEEVRLSQSLLEL WRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNP SLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLP GWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV PFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDS GSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKS TINREATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLRELRRALGRMVERSLRSELAALPLSVQQEHGQLLALLAELLRGPCGSFDV RKTADD hide sequence

RefSeq Acc Id:	XP_017451288 ⟸ XM_017595799
- Peptide Label:	isoform X2
- UniProtKB:	Q5BJS0 (UniProtKB/Swiss-Prot), A0A8I5YC14 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFTLDSFRKDRTQHRQRQCKLPPPRLPPMCVNPAPGGTISRASRDLLKEFPQPKNLLNSVIGRA LGISHAKDKLVYVHTNGPKKKKVTLHIKWPKSVEVEGYGSKKIDAERQAAAAACQLFKGWGLLGPRNELFDAAKYRVLADRFGSPADSWWRPEPTMPPTSWRQLNPENIRPAGTGGLSRSLGREEEED EEEELEEGTIDVTEFLSMTQQDSHNPLRDSRGGSFEMTDDDSAIRALTQFPLPKNLLAKVIQIATSSSTAKNLMQFHTVGTKTKLATLTLLWPCPMTFVAKGRRKAEAENKAAALACKKLKSLGLVDR NNEPLTHAMYNLASLRELGETQRRPCTIQVPEPILRKIEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSEAEEVRLSQSLLELWRRRGPIWQEAPQLPVDPHRDTILSAIE QHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLK GLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPV HSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTA VEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSREN YLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSVFV RDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLRELRRALGRMVERSLRSELAALPLSVQQEHGQLLALLAELLRGPCGSFDVRKTADD hide sequence

Protein Domains

DRBM Helicase ATP-binding Helicase C-terminal

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5BJS0-F1-model_v2	AlphaFold	Q5BJS0	1-1194	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-29082	BioCyc
Ensembl Genes	ENSRNOG00000029194	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000048764	ENTREZGENE
	ENSRNOT00000084838	ENTREZGENE
	ENSRNOT00000109037	ENTREZGENE
Gene3D-CATH	1.20.120.1080	UniProtKB/Swiss-Prot
	3.30.160.20	UniProtKB/Swiss-Prot
	3.40.50.300	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7318733	IMAGE-MGC_LOAD
InterPro	DEAD/DEAH_box_helicase_dom	UniProtKB/Swiss-Prot
	DNA/RNA_helicase_DEAH_CS	UniProtKB/Swiss-Prot
	DUF1605	UniProtKB/Swiss-Prot
	Helicase-assoc_dom	UniProtKB/Swiss-Prot
	Helicase_ATP-bd	UniProtKB/Swiss-Prot
	Helicase_C	UniProtKB/Swiss-Prot
	P-loop_NTPase	UniProtKB/Swiss-Prot
KEGG Report	rno:367172	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:109411	IMAGE-MGC_LOAD
NCBI Gene	367172	ENTREZGENE
PANTHER	ATP-DEPENDENT RNA HELICASE	UniProtKB/Swiss-Prot
	ATP-DEPENDENT RNA HELICASE DHX30	UniProtKB/Swiss-Prot
Pfam	DEAD	UniProtKB/Swiss-Prot
	HA2_C	UniProtKB/Swiss-Prot
	Helicase_C	UniProtKB/Swiss-Prot
	OB_NTP_bind	UniProtKB/Swiss-Prot
PhenoGen	Dhx30	PhenoGen
PROSITE	DEAH_ATP_HELICASE	UniProtKB/Swiss-Prot
	HELICASE_ATP_BIND_1	UniProtKB/Swiss-Prot
	HELICASE_CTER	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000029194	RatGTEx
SMART	DEXDc	UniProtKB/Swiss-Prot
	HA2	UniProtKB/Swiss-Prot
	HELICc	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF52540	UniProtKB/Swiss-Prot
UniProt	A0A0G2JW51_RAT	UniProtKB/TrEMBL
	A0A8I5YC14	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ARW5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AU43_RAT	UniProtKB/TrEMBL
	A0A8I6GHS9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2QL99	ENTREZGENE, UniProtKB/TrEMBL
	A6I3D1	ENTREZGENE, UniProtKB/TrEMBL
	A6I3D2_RAT	UniProtKB/TrEMBL
	DHX30_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-10-05	Dhx30	DExH-box helicase 30	Dhx30	DEAH-box helicase 30	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2016-01-13	Dhx30	DEAH-box helicase 30	Dhx30	DEAH (Asp-Glu-Ala-His) box helicase 30	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2013-08-01	Dhx30	DEAH (Asp-Glu-Ala-His) box helicase 30	Dhx30	DEAH (Asp-Glu-Ala-His) box polypeptide 30	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	Dhx30	DEAH (Asp-Glu-Ala-His) box polypeptide 30	Dhx30_predicted	DEAH (Asp-Glu-Ala-His) box polypeptide 30 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Dhx30_predicted	DEAH (Asp-Glu-Ala-His) box polypeptide 30 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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