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Gene: Fhip2b (FHF complex subunit HOOK interacting protein 2B) Rattus norvegicus

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Symbol:

Fhip2b

Name:

FHF complex subunit HOOK interacting protein 2B

RGD ID:

1308870

Description:

Orthologous to human FHIP2B (FHF complex subunit HOOK interacting protein 2B); INTERACTS WITH bisphenol A; C60 fullerene; cadmium dichloride.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Fam160b2; family with sequence similarity 160, member B2; FHF complex subunit HOOK-interacting protein 2B; LOC306015; MGC188555; Rai16; retinoic acid induced 16

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	52,066,341 - 52,084,296 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	15	52,066,341 - 52,083,798 (-)	Ensembl				GRCr8
mRatBN7.2	15	45,656,641 - 45,674,603 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	45,656,647 - 45,674,105 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	15	49,774,496 - 49,791,959 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	50,886,003 - 50,903,468 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	47,745,315 - 47,762,779 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	52,271,495 - 52,288,938 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	52,271,496 - 52,288,893 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	15	55,995,012 - 56,012,410 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	15	50,983,167 - 51,000,626 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	15	45,334,681 - 45,352,170 (-)	NCBI		Celera
RGSC_v3.1	15	51,001,939 - 51,018,655 (-)	NCBI
Cytogenetic Map	15	p11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

4,4'-sulfonyldiphenol (ISO)

aflatoxin B1 (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP)

bisphenol F (ISO)

C60 fullerene (EXP)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

caffeine (ISO)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

Dibutyl phosphate (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

ethanol (ISO)

fenthion (ISO)

folic acid (ISO)

maneb (ISO)

manganese(II) chloride (EXP)

methidathion (ISO)

N(4)-hydroxycytidine (ISO)

paracetamol (ISO)

paraquat (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

tetrachloromethane (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

troglitazone (ISO)

valproic acid (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932

Genomics

Comparative Map Data

Fhip2b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	52,066,341 - 52,084,296 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	15	52,066,341 - 52,083,798 (-)	Ensembl				GRCr8
mRatBN7.2	15	45,656,641 - 45,674,603 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	45,656,647 - 45,674,105 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	15	49,774,496 - 49,791,959 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	50,886,003 - 50,903,468 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	47,745,315 - 47,762,779 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	52,271,495 - 52,288,938 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	52,271,496 - 52,288,893 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	15	55,995,012 - 56,012,410 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	15	50,983,167 - 51,000,626 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	15	45,334,681 - 45,352,170 (-)	NCBI		Celera
RGSC_v3.1	15	51,001,939 - 51,018,655 (-)	NCBI
Cytogenetic Map	15	p11	NCBI

FHIP2B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	22,089,150 - 22,104,911 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	22,089,139 - 22,104,911 (+)	Ensembl			hg38	GRCh38
GRCh37	8	21,946,661 - 21,962,422 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	22,002,660 - 22,017,836 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	8	22,002,659 - 22,017,835	NCBI
Celera	8	20,908,996 - 20,924,174 (+)	NCBI		Celera
Cytogenetic Map	8	p21.3	NCBI
HuRef	8	20,466,340 - 20,504,422 (+)	NCBI		HuRef
CHM1_1	8	22,148,371 - 22,163,536 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	8	22,363,108 - 22,378,867 (+)	NCBI		T2T-CHM13v2.0

Fhip2b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	70,820,733 - 70,837,309 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	70,820,736 - 70,837,275 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	14	70,583,295 - 70,599,835 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	70,583,296 - 70,599,835 (-)	Ensembl			mm10	GRCm38
MGSCv37	14	70,983,102 - 70,999,642 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	14	69,318,374 - 69,337,634 (-)	NCBI		MGSCv36	mm8
Celera	14	68,124,822 - 68,141,336 (-)	NCBI		Celera
Cytogenetic Map	14	D2	NCBI
cM Map	14	36.32	NCBI

Fhip2b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	45,587,970 - 45,597,700 (+)	Ensembl
ChiLan1.0	NW_004955403	45,587,970 - 45,597,700 (+)	NCBI	ChiLan1.0	ChiLan1.0

FHIP2B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	40,591,098 - 40,606,212 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	16,314,664 - 16,331,425 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	21,333,581 - 21,349,344 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	18,274,581 - 18,289,332 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	18,279,023 - 18,287,880 (+)	Ensembl			panPan2	panpan1.1

FHIP2B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	25	35,144,949 - 35,157,228 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	25	35,146,390 - 35,162,394 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	25	35,734,526 - 35,750,536 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	25	35,356,487 - 35,372,501 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	25	35,356,495 - 35,372,480 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	25	35,301,734 - 35,317,737 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	25	35,156,265 - 35,172,265 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	25	35,311,757 - 35,327,760 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Fhip2b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404943	12,642,474 - 12,654,923 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936555	5,918,339 - 5,928,539 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936555	5,918,354 - 5,928,036 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FHIP2B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	6,360,412 - 6,376,922 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	14	6,360,333 - 6,376,941 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	6,795,952 - 6,812,571 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FHIP2B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	20,159,036 - 20,173,973 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	20,167,153 - 20,172,511 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666052	22,062,840 - 22,077,782 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fhip2b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624758	17,677,843 - 17,689,446 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624758	17,677,862 - 17,690,799 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Fhip2b
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	12	53,754,289 - 53,771,402 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Fhip2b
140 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	232
Count of miRNA genes:	156
Interacting mature miRNAs:	186
Transcripts:	ENSRNOT00000016209
Prediction methods:	Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300144	Rf23	Renal function QTL 23	3.61		renal blood flow trait (VT:2000006)	absolute change in renal vascular resistance (CMO:0001900)	15	44806773	104695021	Rat
738017	Hcas7	Hepatocarcinoma susceptibility QTL 7	2.91		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)	15	2315759	53331089	Rat
152025253	Hrtrt24	Heart rate QTL 24	3.82		heart pumping trait (VT:2000009)		15	31855803	92671517	Rat
1582227	Gluco30	Glucose level QTL 30	3.6	0.0003	blood glucose amount (VT:0000188)	absolute change in blood glucose level area under curve (CMO:0002034)	15	43677244	88677244	Rat
10054130	Srcrt8	Stress Responsive Cort QTL 8	2.18	0.0085	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	15	28527732	73527732	Rat
1582228	Epfw3	Epididymal fat weight QTL 3	4.1	0.0002	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	15	43677244	88677244	Rat
1578646	Bmd18	Bone mineral density QTL 18	5.2		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	15	25285835	104695021	Rat
2324620	Coatc3	Coat color QTL 3			coat/hair pigmentation trait (VT:0010463)	pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)	15	22336351	52597086	Rat
1578647	Bmd17	Bone mineral density QTL 17	4		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	15	25285835	104695021	Rat
61424	Scl1	Serum cholesterol level QTL 1	7.7	0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	15	19155762	87086765	Rat
1598828	Glom14	Glomerulus QTL 14	2.5		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	15	40463152	85463152	Rat
2317750	Glom26	Glomerulus QTL 26	4.3		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	15	14926594	71614418	Rat
631550	Bw7	Body weight QTL 7	3.6		body mass (VT:0001259)	body weight (CMO:0000012)	15	22336351	67336351	Rat
1582242	Gluco28	Glucose level QTL 28	3.3	0.0008	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	15	43677244	88677244	Rat
2306968	Anxrr23	Anxiety related response QTL 23	4.83		reflex trait (VT:0001961)	amplitude of the acoustic startle response (CMO:0001520)	15	44806773	52597086	Rat
1582244	Bw79	Body weight QTL 79	4	0.0002	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	15	43677244	88677244	Rat
1578660	Bss19	Bone structure and strength QTL 19	4.3		femur morphology trait (VT:0000559)	bone trabecular cross-sectional area (CMO:0002311)	15	25285835	104695021	Rat
7411725	Strs7	Sensitivity to stroke QTL 7	3.8		cerebrum integrity trait (VT:0010549)	percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)	15	44465447	56583797	Rat
1582214	Stl21	Serum triglyceride level QTL 21	3.1	0.022	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	15	43677244	88677244	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001170474	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006252274	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017599704	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017599705	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039093353	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039093354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039093355	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039093356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005493730	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC168691	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473951	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000016209 ⟹ ENSRNOP00000016209

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	15	52,066,341 - 52,083,798 (-)	Ensembl
mRatBN7.2 Ensembl	15	45,656,647 - 45,674,105 (-)	Ensembl
Rnor_6.0 Ensembl	15	52,271,496 - 52,288,893 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000097198 ⟹ ENSRNOP00000092443

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	15	45,656,647 - 45,668,589 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000107402 ⟹ ENSRNOP00000082834

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	15	52,066,341 - 52,083,798 (-)	Ensembl
mRatBN7.2 Ensembl	15	45,656,647 - 45,668,472 (-)	Ensembl

RefSeq Acc Id:

NM_001170474 ⟹ NP_001163945

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	52,066,341 - 52,083,798 (-)	NCBI
mRatBN7.2	15	45,656,646 - 45,674,105 (-)	NCBI
Rnor_6.0	15	52,271,495 - 52,288,893 (-)	NCBI
Rnor_5.0	15	55,995,012 - 56,012,410 (-)	NCBI
RGSC_v3.4	15	50,983,167 - 51,000,626 (-)	RGD
Celera	15	45,334,681 - 45,352,170 (-)	RGD

Sequence:

show sequence

CGGGCCGCGAGCCGGGCCGGGTCGCCATCATGCTGAGCCGGCTCGGGGCACTGCTGCAGGAGGC
CGTGGGGGCGCGGGAGCCCAGCATTGACCTGCTGCAGGCCTTCGTAGAGCATTGGAAAGGCATC
ACACACTACTATATCGAGAGCACAGATGAAAACACCCCAGCCAAGAAAACAGATATCCCCTGGC
GACTGAAGCAGATGTTGGACATCCTGGTGTATGAGGAGAAGCAGCAGGCATCCTCTGGTGAGGC
TGGACCCTGTCTGGAATACTTGCTACAACACAAGATCCTGGAGACCCTGTGCACTCTGGGCAAA
GCGGAGTATCCCCCAGGCATGCGGCAGCAGGTATTCCAGTTCTTCAGCAAGGTCCTGGCCCAGG
TGCAGCACCCCCTGCTACACTACCTGAGTGTCCACAGACCCGTGCAGAAACTTCTCCGACTTGG
AGGAACAGCCCCTGGATCCCTCACCGAAAAGGAAGAAGTTCAGTTCACCAGTGTCCTTTGCTCT
AAGATACAGCAGGATCCAGAGCTGCTGGCCTACATTCTGGAAGGTAAAAAGATGATAGGTAAGA
AGAAGACAGCCAGAGGGTCTGCAGCTCCACCTAAAGACATAGCCGGCTACAGGGACAAGGACTG
TCCCCACAGCGATGCTCCCAGTGGGGATCCTGGACTAGATAAGGAATACCATGGTGTCCCAGCC
TTGAGCGTCCACCTGCCTGCTGTGACTGAGGGGCCAGAAAGTGGGCCCGGGGAGAGCAATCTCA
TCACCTCCCTGCTTGGGCTGTGCAAGAGCAAGAAGAGTCGACTGGCCCTGAAGGCACAGGAGAA
CATATTGCTGCTGGTAAGCCTGGCCTCACCAGCAGCTGCCACCTACCTGACACAAAGTACCTCC
TGTTGTACGGCGATAGCTGAGCACCTTTGCCAACTGTACCGGTCCATGCCAGCCTGCCTTGACC
CAGCAGACATTGCCACTTTAGAGGGCATCAGTTGGAGGTTACCAAGTGCCCCATCTGATGAAAC
CGCTTTCCCTGGCAAGGAGGCTCTGGCTGCCTTCCTGGGCTGGTTTGATTACTGCGACCACCTT
ATCACAGAGGCACACACGGTGGTTGCAGATGCCTTGGCAAGGGCCGTGGCTGAGAAGCTGTTTG
TAGAGACCCTGCAGCCCCAGCTCCTGCACGTGTCTGAGCAGAGCATCTTAACCTCCACTGCCCT
GTTGACAGTCCTGCTCCGTCAGCTGCGCTCCCCTGCTCTGCTGCAGGAGGCCATGACCTTCCTC
TTAGGCACTGACCAGCAGCCTGCATCCAAGGAGGACAGTTCCCATACTCTGGGCACACACCTCA
TCATGCACTGTGACCATCTCTCTGACGAGATCAGCATTGCCACTCTGAGGCTGTTTGAGGAGCT
GCTGCAGAAACCCCATGAGCGAGCCATCCGCAGTTTGGTTCTGCAGAACCTTGAGGGCCGCCTG
TATGTGGCCCGGGGCTCGCCAGAGCCAGAGAGCTATGAGGATAACCTGGATCTGGAGGAAGACC
CCTACTTCACCGATGGCTTCCTTGATTCTGGCCTTCAACCCTCCACAAAGCCTCCCCCAGCTCC
TGCCACCAGTTCAGATGGCAAAACAGCAGTGACGGAGATTGTTAACAGCTTCCTTTGCCTGGTC
CCTGAGGAAGCCAAGACATCAGCCTTCCTGGAGGAGAATGGATATGACACATATGTCCACGATG
CCTACGGCCTGTTCCAGGAATGCAGCTCCCGTGTGGCCCACTGGGGTTGGCCCCTGGGTCCAGC
ACCCTTGGACTCTCATGAGCCTGAAAGGCCCTTCTTTGAGGGCCGCTTCCTCCAAGTGCTCTTC
GATCGAATTGCCCGGATTTTGGACCAGCCTTACAGCCTGAACCTACAAGTGACCTCAGTCCTGT
CCCGGCTCGCCCTGTTCCCCCACCCCCATATCCATGAGTACCTCCTGGATCCCTACATCAGCCT
GGCCCCTGGCTGCAGGAGCCTGTTCTCTGTGCTTGTCAGGGTGATCGGTGACTTAATGCAAAGA
ATTCAGAGGGTACCCCAGTTTTCAGGCAAACTGCTCCTGGTGCGCAAGCAACTGATGGGCCAGA
TTCCCGGAGAGCATCTGGACCATCAGACCCTACTCCAGGGCGTGGTAGTTCTTGAGGAATTCTG
CAAGGAGCTGGCTGCCATTGCGTTTGTCAAGTTTCCCCCACATGGTCCTTACCTGAACTTCTCT
CCACCTCCAGAAGGGCAAGTCTGAGCCAGGAGCATGATGGGTGGGGGAAGACTCCTGCCTGTAC
TTCTGCCCACGGGCAGTCTCCTGCCTGGCCATGCTGTCACTCAGTCCTCCATGTGGGGACTTCG
GCCACAGACCTCACCTGTTGACATGAGCTGAAGTTTCAGGGAGGTTCTGGCTTCTAAGGCACTG
GTGTTCTTAGAGCCTTCTGAGAGTAGCTGGAGGACGGCCAGTGAGCGCCTAGATGTTGCCCTGC
ATGTGTTTCGTGACTATCTCTGCTATACTGTGACCAGGGCCACAACACAAGATAGCTCCAGGGG
CAAGGGAAATGAACTGCTGCTTTTGAGGCTGGCTAAAACTCCAGTCCGGAGAGATAGGTGGCCA
AGAACCCTGTCTGTTACGTTAGGTATCATGGAAGCTGCTGAGACTGGGCAGGTTTCTCCATGGC
TTCATCAACAGTAGTGAAGGAGACAGAGAAGGGAACTGAGGGGGAGCCCCCTCTTCCTGCTCTA
CCCTCCTGGAGACTGTTGCAAAATTTCCAACTGCCTCATGGCAGATGCCCAAAGTATTCTCTGT
GCCCAGGCGGGGGCAGCTGCTAACCAGAGCTTTGGCGCAGCTGCAGCCAGGGCAGGCGAGAGCC
TGGGAGCTGGGAGCTGGGTGCCAGGTTCCAGCTCCAGCTGGTTCCTCTCTGGCGCCTTCTGAAC
CCGTCTCGGCAAGTCGGAAACACCTGGGCAGAGAGGTCATTGACCAGGGGTGGTGGGCCTTGCC
CTCAGAATCTTGCCCAACCCCCAGGGATCCTAGTGGAATTCGATCCTGGGGAGCATAGGAACTC
AAGGTACAGATGGGAACGGGCACCCCAACCCCAGACTCCTGAAGCTAGTAAGGATAGGCTGAGA
CACAAGCAGATAGATAGCTCTGGTATTGTTCTTCCTATGTCCTCCATGGCTGGGGCTGCTACCC
CACCCGGCCTGAATCTGTCTCGACCTGCAAGAACACTTGGGCGGCGCCAGGCATTACCTCACAA
CAGGCCTGCAGTTGTTGGCTTCGCTTCTGGGCAAGGAGGAGCAGGCCAGAGCCCCTTTTGCTTC
CTTTTCCTGCCCATGCTGCCTCTCGAAGCTGGGCACAGGTTGCCAGGAGGTGACATGAAAGAGG
AGGAAACTCCATGACCTCTACCTCTCCCGCATTCCTCCCAGCGGGGGAGGACTTCTCTGCTGCT
CCAAAGAACATCACGCACTCCTGTGTGTGTGAGAGCTATGAATTTGACTCTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGCGCGAGAGCGCGCGAGCGTGCTGGGTGTGTGTGAGCTGCGAGTGCACA
TGGGTGCTGATGTGGGACAGGAGCAGACCTTGGTGGAGTGGGTCTAGACTCTTGGGATTCTTAC
ACATTTGAGGGGCTGGGCAATACTCAATGCACTTTGGCATTTGCATGGTGTTTTCACAACAGCA
CAGCAATAAACATTGTGATTGTGTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_017599704 ⟹ XP_017455193

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	52,066,341 - 52,084,296 (-)	NCBI
mRatBN7.2	15	45,656,641 - 45,674,603 (-)	NCBI
Rnor_6.0	15	52,272,761 - 52,288,938 (-)	NCBI

Sequence:

show sequence

CCCGTTGGGCCGCCTCCTCCGCCACCGCCGCGCCGCCACCGGAGCCGGGCCGCGAGCCGGGCCG
GGTCGCCATCATGCTGAGCCGGCTCGGGGCACTGCTGCAGGAGGCCGTGGGGGCGCGGGAGCCC
AGCATTGACCTGCTGCAGGCCTTCGTAGAGCATTGGAAAGGCATCACACACTACTATATCGAGA
GCACAGATGAAAACACCCCAGCCAAGAAAACAGATATCCCCTGGCGACTGAAGCAGATGTTGGA
CATCCTGGTGTATGAGGAGAAGCAGCAGGCATCCTCTGGTGAGGCTGGACCCTGTCTGGAATAC
TTGCTACAACACAAGATCCTGGAGACCCTGTGCACTCTGGGCAAAGCGGAGTATCCCCCAGGCA
TGCGGCAGCAGGTATTCCAGTTCTTCAGCAAGGTCCTGGCCCAGGTGCAGCACCCCCTGCTACA
CTACCTGAGTGTCCACAGACCCGTGCAGAAACTTCTCCGACTTGGAGGAACAGCCCCTGGATCC
CTCACCGAAAAGGAAGAAGTTCAGTTCACCAGTGTCCTTTGCTCTAAGATACAGCAGGATCCAG
AGCTGCTGGCCTACATTCTGGAAGGTAAAAAGATGATAGGTAAGAAGAAGACAGCCAGAGGGTC
TGCAGCTCCACCTAAAGACATAGCCGGCTACAGGGACAAGGACTGTCCCCACAGCGATGCTCCC
AGTGGGGATCCTGGACTAGATAAGGAATACCATGGTGTCCCAGCCTTGAGCGTCCACCTGCCTG
CTGTGACTGAGGGGCCAGAAAGTGGGCCCGGGGAGAGCAATCTCATCACCTCCCTGCTTGGGCT
GTGCAAGAGCAAGAAGAGTCGACTGGCCCTGAAGGCACAGGAGAACATATTGCTGCTGGTAAGC
CTGGCCTCACCAGCAGCTGCCACCTACCTGACACAAAGTACCTCCTGTTGTACGGCGATAGCTG
AGCACCTTTGCCAACTGTACCGGTCCATGCCAGCCTGCCTTGACCCAGCAGACATTGCCACTTT
AGAGGGCATCAGTTGGAGGTTACCAAGTGCCCCATCTGATGAAACCGCTTTCCCTGGCAAGGAG
GCTCTGGCTGCCTTCCTGGGCTGGTTTGATTACTGCGACCACCTTATCACAGAGGCACACACGG
TGGTTGCAGATGCCTTGGCAAGGGCCGTGGCTGAGAAGCTGTTTGTAGAGACCCTGCAGCCCCA
GCTCCTGCACGTGTCTGAGCAGAGCATCTTAACCTCCACTGCCCTGTTGACAGTCCTGCTCCGT
CAGCTGCGCTCCCCTGCTCTGCTGCAGGAGGCCATGACCTTCCTCTTAGGCACTGACCAGCAGC
CTGCATCCAAGGAGGACAGTTCCCATACTCTGGGCACACACCTCATCATGCACTGTGACCATCT
CTCTGACGAGATCAGCATTGCCACTCTGAGGCTGTTTGAGGAGCTGCTGCAGAAACCCCATGAG
CGAGCCATCCGCAGTTTGGTTCTGCAGAACCTTGAGGGCCGCCTGTATGTGGCCCGGGGCTCGC
CAGAGCCAGAGAGCTATGAGGATAACCTGGATCTGGAGGAAGACCCCTACTTCACCGATGGCTT
CCTTGATTCTGGCCTTCAACCCTCCACAAAGCCTCCCCCAGCTCCTGCCACCAGTTCAGATGGC
AAAACAGCAGTGACGGAGATTGTTAACAGCTTCCTTTGCCTGGTCCCTGAGGAAGCCAAGACAT
CAGCCTTCCTGGAGGAGAATGGATATGACACATATGTCCACGATGCCTACGGCCTGTTCCAGGA
ATGCAGCTCCCGTGTGGCCCACTGGGGTTGGCCCCTGGGTCCAGCACCCTTGGACTCTCATGAG
CCTGAAAGGCCCTTCTTTGAGGGCCGCTTCCTCCAAGTGCTCTTCGATCGAATTGCCCGGATTT
TGGACCAGGTGATCGGTGACTTAATGCAAAGAATTCAGAGGGTACCCCAGTTTTCAGGCAAACT
GCTCCTGGTGCGCAAGCAACTGATGGGCCAGATTCCCGGAGAGCATCTGGACCATCAGACCCTA
CTCCAGGGCGTGGTAGTTCTTGAGGAATTCTGCAAGGAGCTGGCTGCCATTGCGTTTGTCAAGT
TTCCCCCACATGGTCCTTACCTGAACTTCTCTCCACCTCCAGAAGGGCAAGTCTGAGCCAGGAG
CATGATGGGTGGGGGAAGACTCCTGCCTGTACTTCTGCCCACGGGCAGTCTCCTGCCTGGCCAT
GCTGTCACTCAGTCCTCCATGTGGGGACTTCGGCCACAGACCTCACCTGTTGACATGAGCTGAA
GTTTCAGGGAGGTTCTGGCTTCTAAGGCACTGGTGTTCTTAGAGCCTTCTGAGAGTAGCTGGAG
GACGGCCAGTGAGCGCCTAGATGTTGCCCTGCATGTGTTTCGTGACTATCTCTGCTATACTGTG
ACCAGGGCCACAA

hide sequence

RefSeq Acc Id:

XM_039093353 ⟹ XP_038949281

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	52,066,341 - 52,083,135 (-)	NCBI
mRatBN7.2	15	45,656,641 - 45,673,431 (-)	NCBI

RefSeq Acc Id:

XM_039093354 ⟹ XP_038949282

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	52,066,341 - 52,083,121 (-)	NCBI
mRatBN7.2	15	45,656,641 - 45,673,424 (-)	NCBI

RefSeq Acc Id:

XM_039093355 ⟹ XP_038949283

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	52,066,341 - 52,083,135 (-)	NCBI
mRatBN7.2	15	45,656,641 - 45,673,434 (-)	NCBI

RefSeq Acc Id:

XM_039093356 ⟹ XP_038949284

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	52,068,164 - 52,084,296 (-)	NCBI
mRatBN7.2	15	45,658,461 - 45,674,603 (-)	NCBI

RefSeq Acc Id:

XR_005493730

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	52,068,162 - 52,084,296 (-)	NCBI
mRatBN7.2	15	45,656,641 - 45,674,603 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001163945	(Get FASTA)	NCBI Sequence Viewer
	XP_017455193	(Get FASTA)	NCBI Sequence Viewer
	XP_038949281	(Get FASTA)	NCBI Sequence Viewer
	XP_038949282	(Get FASTA)	NCBI Sequence Viewer
	XP_038949283	(Get FASTA)	NCBI Sequence Viewer
	XP_038949284	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI68691	(Get FASTA)	NCBI Sequence Viewer
	EDM02234	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000016209
	ENSRNOP00000016209.7
	ENSRNOP00000082834
	ENSRNOP00000082834.2

RefSeq Acc Id:

NP_001163945 ⟸ NM_001170474

- UniProtKB:

B5DEJ2 (UniProtKB/TrEMBL), F7FI79 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLSRLGALLQEAVGAREPSIDLLQAFVEHWKGITHYYIESTDENTPAKKTDIPWRLKQMLDILV
YEEKQQASSGEAGPCLEYLLQHKILETLCTLGKAEYPPGMRQQVFQFFSKVLAQVQHPLLHYLS
VHRPVQKLLRLGGTAPGSLTEKEEVQFTSVLCSKIQQDPELLAYILEGKKMIGKKKTARGSAAP
PKDIAGYRDKDCPHSDAPSGDPGLDKEYHGVPALSVHLPAVTEGPESGPGESNLITSLLGLCKS
KKSRLALKAQENILLLVSLASPAAATYLTQSTSCCTAIAEHLCQLYRSMPACLDPADIATLEGI
SWRLPSAPSDETAFPGKEALAAFLGWFDYCDHLITEAHTVVADALARAVAEKLFVETLQPQLLH
VSEQSILTSTALLTVLLRQLRSPALLQEAMTFLLGTDQQPASKEDSSHTLGTHLIMHCDHLSDE
ISIATLRLFEELLQKPHERAIRSLVLQNLEGRLYVARGSPEPESYEDNLDLEEDPYFTDGFLDS
GLQPSTKPPPAPATSSDGKTAVTEIVNSFLCLVPEEAKTSAFLEENGYDTYVHDAYGLFQECSS
RVAHWGWPLGPAPLDSHEPERPFFEGRFLQVLFDRIARILDQPYSLNLQVTSVLSRLALFPHPH
IHEYLLDPYISLAPGCRSLFSVLVRVIGDLMQRIQRVPQFSGKLLLVRKQLMGQIPGEHLDHQT
LLQGVVVLEEFCKELAAIAFVKFPPHGPYLNFSPPPEGQV

hide sequence

RefSeq Acc Id:	XP_017455193 ⟸ XM_017599704
- Peptide Label:	isoform X1
- UniProtKB:	F7FI79 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLSRLGALLQEAVGAREPSIDLLQAFVEHWKGITHYYIESTDENTPAKKTDIPWRLKQMLDILV YEEKQQASSGEAGPCLEYLLQHKILETLCTLGKAEYPPGMRQQVFQFFSKVLAQVQHPLLHYLS VHRPVQKLLRLGGTAPGSLTEKEEVQFTSVLCSKIQQDPELLAYILEGKKMIGKKKTARGSAAP PKDIAGYRDKDCPHSDAPSGDPGLDKEYHGVPALSVHLPAVTEGPESGPGESNLITSLLGLCKS KKSRLALKAQENILLLVSLASPAAATYLTQSTSCCTAIAEHLCQLYRSMPACLDPADIATLEGI SWRLPSAPSDETAFPGKEALAAFLGWFDYCDHLITEAHTVVADALARAVAEKLFVETLQPQLLH VSEQSILTSTALLTVLLRQLRSPALLQEAMTFLLGTDQQPASKEDSSHTLGTHLIMHCDHLSDE ISIATLRLFEELLQKPHERAIRSLVLQNLEGRLYVARGSPEPESYEDNLDLEEDPYFTDGFLDS GLQPSTKPPPAPATSSDGKTAVTEIVNSFLCLVPEEAKTSAFLEENGYDTYVHDAYGLFQECSS RVAHWGWPLGPAPLDSHEPERPFFEGRFLQVLFDRIARILDQVIGDLMQRIQRVPQFSGKLLLV RKQLMGQIPGEHLDHQTLLQGVVVLEEFCKELAAIAFVKFPPHGPYLNFSPPPEGQV hide sequence

Ensembl Acc Id:

ENSRNOP00000016209 ⟸ ENSRNOT00000016209

RefSeq Acc Id:	XP_038949283 ⟸ XM_039093355
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6AHJ2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038949281 ⟸ XM_039093353
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AHJ2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038949282 ⟸ XM_039093354
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AHJ2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038949284 ⟸ XM_039093356
- Peptide Label:	isoform X4

Ensembl Acc Id:

ENSRNOP00000092443 ⟸ ENSRNOT00000097198

Ensembl Acc Id:

ENSRNOP00000082834 ⟸ ENSRNOT00000107402

Protein Domains

FHF complex subunit HOOK-interacting protein C-

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B5DEJ2-F1-model_v2	AlphaFold	B5DEJ2	1-744	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13699816

Promoter ID:

EPDNEW_R10339

Type:

initiation region

Name:

Fam160b2_1

Description:

family with sequence similarity 160, member B2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	15	52,288,901 - 52,288,961	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308870	AgrOrtholog
BioCyc Gene	G2FUF-13208	BioCyc
Ensembl Genes	ENSRNOG00000012014	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000016209	ENTREZGENE
	ENSRNOT00000016209.7	UniProtKB/TrEMBL
	ENSRNOT00000107402	ENTREZGENE
	ENSRNOT00000107402.2	UniProtKB/TrEMBL
InterPro	FHIP_C	UniProtKB/TrEMBL
	FHIP_KELAA_motif	UniProtKB/TrEMBL
	RetinoicA-induced_16-like	UniProtKB/TrEMBL
KEGG Report	rno:306015	UniProtKB/TrEMBL
NCBI Gene	306015	ENTREZGENE
PANTHER	FHF COMPLEX SUBUNIT HOOK INTERACTING PROTEIN 2B	UniProtKB/TrEMBL
	PTHR21705	UniProtKB/TrEMBL
Pfam	DUF5917	UniProtKB/TrEMBL
	KELAA	UniProtKB/TrEMBL
	RAI16-like	UniProtKB/TrEMBL
PhenoGen	Fhip2b	PhenoGen
RatGTEx	ENSRNOG00000012014	RatGTEx
UniProt	A0A8I5ZVN6_RAT	UniProtKB/TrEMBL
	A0A8I6AHJ2	ENTREZGENE
	B5DEJ2	ENTREZGENE, UniProtKB/TrEMBL
	F7FI79	ENTREZGENE
UniProt Secondary	F7FI79	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-01-28	Fhip2b	FHF complex subunit HOOK interacting protein 2B	Fam160b2	family with sequence similarity 160, member B2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-11-04	Fam160b2	family with sequence similarity 160, member B2	Rai16	retinoic acid induced 16	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Rai16	retinoic acid induced 16	Rai16_predicted	retinoic acid induced 16 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Rai16_predicted	retinoic acid induced 16 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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