Pura (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 18 | 28,159,103 - 28,179,539 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 18 | 27,885,071 - 27,905,509 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 18 | 27,884,556 - 27,905,513 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 18 | 28,012,429 - 28,032,867 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 18 | 28,774,266 - 28,794,712 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 18 | 28,109,203 - 28,129,639 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 18 | 29,103,850 - 29,110,215 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 18 | 29,110,242 - 29,111,156 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 18 | 28,817,907 - 28,820,657 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 18 | 28,916,722 - 28,925,008 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 18 | 28,948,984 - 28,950,043 (+) | NCBI | | | | | Celera | 18 | 27,615,341 - 27,621,754 (+) | NCBI | | Celera | | | Cytogenetic Map | 18 | p11 | NCBI | | | | |
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PURA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 5 | 140,114,109 - 140,125,619 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 5 | 140,107,777 - 140,125,619 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 5 | 139,493,694 - 139,505,204 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 5 | 139,473,892 - 139,476,505 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 5 | 139,473,891 - 139,475,030 | NCBI | | | | | Celera | 5 | 135,569,524 - 135,572,137 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | q31.3 | NCBI | | | | | HuRef | 5 | 134,636,880 - 134,642,173 (+) | NCBI | | HuRef | | | CHM1_1 | 5 | 138,926,813 - 138,932,106 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 5 | 140,639,205 - 140,650,714 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Pura (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 18 | 36,413,614 - 36,434,575 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 18 | 36,414,150 - 36,425,588 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 18 | 36,280,560 - 36,292,535 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 18 | 36,281,097 - 36,292,535 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 18 | 36,440,816 - 36,447,899 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 18 | 36,407,136 - 36,414,223 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 18 | 36,723,061 - 36,744,137 (+) | NCBI | | Celera | | | Cytogenetic Map | 18 | B2 | NCBI | | | | |
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Pura (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 | NW_004955418 | 538,883 - 548,605 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PURA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 2 | 35,325,630 - 35,345,366 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 2 | 35,330,902 - 35,332,835 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 2 | 32,434,696 - 32,449,319 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 2 | 35,787,240 - 35,801,863 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 2 | 35,787,255 - 35,788,223 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 2 | 32,839,467 - 32,854,084 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 2 | 33,706,906 - 33,721,528 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 2 | 34,457,817 - 34,472,443 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Pura (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024407213 | 152,471,846 - 152,488,693 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936531 | 9,129,715 - 9,130,515 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936531 | 9,129,024 - 9,134,916 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PURA (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 2 | 141,884,155 - 141,886,330 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 141,877,775 - 141,899,259 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 147,793,990 - 147,813,506 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PURA (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 23 | 42,757,963 - 42,767,393 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 23 | 42,764,263 - 42,765,231 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666034 | 35,115,690 - 35,128,119 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Pura (Heterocephalus glaber - naked mole-rat) |
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