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Gene: Kif12 (kinesin family member 12) Rattus norvegicus

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Symbol:

Kif12

Name:

kinesin family member 12

RGD ID:

1308487

Description:

Predicted to enable ATP hydrolysis activity; microtubule binding activity; and microtubule motor activity. Predicted to be involved in microtubule-based movement. Predicted to be located in extracellular exosome and microtubule organizing center. Predicted to be part of kinesin complex. Predicted to be active in cytoplasm and microtubule. Human ortholog(s) of this gene implicated in progressive familial intrahepatic cholestasis. Orthologous to human KIF12 (kinesin family member 12); INTERACTS WITH 1-naphthyl isothiocyanate; 17beta-estradiol; 2,6-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

kinesin-like protein KIF12; LOC313254

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	KIF12 (kinesin family member 12)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Kif12 (kinesin family member 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Kif12 (kinesin family member 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	KIF12 (kinesin family member 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	KIF12 (kinesin family member 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Kif12 (kinesin family member 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	KIF12 (kinesin family member 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	KIF12 (kinesin family member 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Kif12 (kinesin family member 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	KIF12 (kinesin family member 12)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Kif12 (kinesin family member 12)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Klp54D	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	81,611,730 - 81,620,977 (-)	NCBI		GRCr8
mRatBN7.2	5	76,596,204 - 76,603,261 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	76,596,208 - 76,602,843 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	78,995,506 - 79,002,141 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	80,812,640 - 80,819,275 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	80,788,149 - 80,794,784 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	79,001,708 - 79,008,370 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	79,001,459 - 79,008,363 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	83,119,952 - 83,126,644 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	80,146,349 - 80,152,996 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	80,151,624 - 80,158,110 (-)	NCBI
Celera	5	75,532,721 - 75,539,356 (-)	NCBI		Celera
Cytogenetic Map	5	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Kif12	Rat	genetic disease		ISO	KIF12 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:25741868 and PMID:28492532
Kif12	Rat	Progressive Familial Intrahepatic Cholestasis 8		ISO	KIF12 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Cholestasis more ...	ClinVar	PMID:25741868 more ...
Kif12	Rat	prostate cancer		ISO	KIF12 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Malignant tumor of prostate	ClinVar	PMID:23265383

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Kif12	Rat	Progressive Familial Intrahepatic Cholestasis 8		ISO	KIF12 (Homo sapiens)	7240710		OMIM

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Kif12	Rat	1,1-dichloroethene	decreases expression	ISO	Kif12 (Mus musculus)	6480464	vinylidene chloride results in decreased expression of KIF12 mRNA	CTD	PMID:26682919
Kif12	Rat	1,2-dimethylhydrazine	increases expression	ISO	Kif12 (Mus musculus)	6480464	1 and 2-Dimethylhydrazine results in increased expression of KIF12 mRNA	CTD	PMID:22206623
Kif12	Rat	1-naphthyl isothiocyanate	increases expression	EXP		6480464	1-Naphthylisothiocyanate results in increased expression of KIF12 mRNA	CTD	PMID:30723492
Kif12	Rat	17beta-estradiol	multiple interactions	ISO	KIF12 (Homo sapiens)	6480464	[Estradiol co-treated with TGFB1 protein] results in increased expression of KIF12 mRNA	CTD	PMID:30165855
Kif12	Rat	17beta-estradiol	increases expression	EXP		6480464	Estradiol results in increased expression of KIF12 mRNA	CTD	PMID:32145629
Kif12	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	Kif12 (Mus musculus)	6480464	Tetrachlorodibenzodioxin affects the expression of KIF12 mRNA	CTD	PMID:21570461
Kif12	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	ISO	Kif12 (Mus musculus)	6480464	Tetrachlorodibenzodioxin results in decreased expression of KIF12 mRNA	CTD	PMID:37172768
Kif12	Rat	2,6-dinitrotoluene	affects expression	EXP		6480464	2 and 6-dinitrotoluene affects the expression of KIF12 mRNA	CTD	PMID:21346803
Kif12	Rat	4,4'-sulfonyldiphenol	increases methylation	ISO	Kif12 (Mus musculus)	6480464	bisphenol S results in increased methylation of KIF12 exon	CTD	PMID:33297965
Kif12	Rat	acetamide	increases expression	EXP		6480464	acetamide results in increased expression of KIF12 mRNA	CTD	PMID:31881176
Kif12	Rat	aflatoxin B1	decreases expression	ISO	KIF12 (Homo sapiens)	6480464	Aflatoxin B1 results in decreased expression of KIF12 mRNA	CTD	PMID:27153756
Kif12	Rat	aflatoxin B1	increases expression	EXP		6480464	Aflatoxin B1 results in increased expression of KIF12 mRNA	CTD	PMID:25378103 and PMID:33354967
Kif12	Rat	aristolochic acid A	decreases expression	ISO	KIF12 (Homo sapiens)	6480464	aristolochic acid I results in decreased expression of KIF12 mRNA	CTD	PMID:33212167
Kif12	Rat	benzo[a]pyrene	increases mutagenesis	ISO	KIF12 (Homo sapiens)	6480464	Benzo(a)pyrene results in increased mutagenesis of KIF12 gene	CTD	PMID:25435355
Kif12	Rat	benzo[a]pyrene	increases methylation	ISO	KIF12 (Homo sapiens)	6480464	Benzo(a)pyrene results in increased methylation of KIF12 5' UTR and Benzo(a)pyrene results in increased methylation of KIF12 promoter	CTD	PMID:27901495
Kif12	Rat	beta-lapachone	decreases expression	ISO	KIF12 (Homo sapiens)	6480464	beta-lapachone results in decreased expression of KIF12 mRNA	CTD	PMID:38218311
Kif12	Rat	beta-naphthoflavone	multiple interactions	EXP		6480464	[Diethylnitrosamine co-treated with beta-Naphthoflavone] results in increased expression of KIF12 mRNA	CTD	PMID:18164116
Kif12	Rat	bis(2-ethylhexyl) phthalate	decreases expression	ISO	KIF12 (Homo sapiens)	6480464	Diethylhexyl Phthalate results in decreased expression of KIF12 mRNA	CTD	PMID:31163220
Kif12	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of KIF12 mRNA	CTD	PMID:25181051
Kif12	Rat	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of KIF12 mRNA	CTD	PMID:32145629
Kif12	Rat	bisphenol F	decreases expression	ISO	Kif12 (Mus musculus)	6480464	bisphenol F results in decreased expression of KIF12 mRNA	CTD	PMID:38685157
Kif12	Rat	butanal	decreases expression	ISO	KIF12 (Homo sapiens)	6480464	butyraldehyde results in decreased expression of KIF12 mRNA	CTD	PMID:26079696
Kif12	Rat	chlorpyrifos	decreases expression	ISO	Kif12 (Mus musculus)	6480464	Chlorpyrifos results in decreased expression of KIF12 mRNA	CTD	PMID:37019170
Kif12	Rat	choline	multiple interactions	ISO	Kif12 (Mus musculus)	6480464	[Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased expression of KIF12 mRNA	CTD	PMID:20938992
Kif12	Rat	cobalt dichloride	decreases expression	EXP		6480464	cobaltous chloride results in decreased expression of KIF12 mRNA	CTD	PMID:24386269
Kif12	Rat	crocidolite asbestos	increases expression	ISO	Kif12 (Mus musculus)	6480464	Asbestos and Crocidolite results in increased expression of KIF12 mRNA	CTD	PMID:29279043
Kif12	Rat	Cuprizon	decreases expression	EXP		6480464	Cuprizone results in decreased expression of KIF12 mRNA	CTD	PMID:27523638
Kif12	Rat	diazinon	decreases methylation	ISO	KIF12 (Homo sapiens)	6480464	Diazinon results in decreased methylation of KIF12 gene	CTD	PMID:22964155
Kif12	Rat	endosulfan	decreases expression	EXP		6480464	Endosulfan results in decreased expression of KIF12 mRNA	CTD	PMID:29391264
Kif12	Rat	folic acid	multiple interactions	ISO	Kif12 (Mus musculus)	6480464	[Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased expression of KIF12 mRNA	CTD	PMID:20938992
Kif12	Rat	folic acid	increases expression	ISO	Kif12 (Mus musculus)	6480464	Folic Acid results in increased expression of KIF12 mRNA	CTD	PMID:25629700
Kif12	Rat	furan	increases expression	EXP		6480464	furan results in increased expression of KIF12 mRNA	CTD	PMID:26194646
Kif12	Rat	gentamycin	decreases expression	EXP		6480464	Gentamicins results in decreased expression of KIF12 mRNA	CTD	PMID:22061828
Kif12	Rat	glyphosate	increases methylation	EXP		6480464	Glyphosate results in increased methylation of KIF12 gene	CTD	PMID:31011160
Kif12	Rat	L-methionine	multiple interactions	ISO	Kif12 (Mus musculus)	6480464	[Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased expression of KIF12 mRNA	CTD	PMID:20938992
Kif12	Rat	Muraglitazar	decreases expression	EXP		6480464	muraglitazar results in decreased expression of KIF12 mRNA	CTD	PMID:21515302
Kif12	Rat	N-nitrosodiethylamine	multiple interactions	EXP		6480464	[Diethylnitrosamine co-treated with beta-Naphthoflavone] results in increased expression of KIF12 mRNA and [Diethylnitrosamine co-treated with Thioacetamide] results in increased expression of KIF12 mRNA	CTD	PMID:18164116 and PMID:28943392
Kif12	Rat	silicon dioxide	decreases expression	ISO	KIF12 (Homo sapiens)	6480464	Silicon Dioxide analog results in decreased expression of KIF12 mRNA	CTD	PMID:25895662
Kif12	Rat	sodium arsenite	decreases expression	ISO	KIF12 (Homo sapiens)	6480464	sodium arsenite results in decreased expression of KIF12 mRNA	CTD	PMID:29301061
Kif12	Rat	sodium dichromate	affects expression	EXP		6480464	sodium bichromate affects the expression of KIF12 mRNA	CTD	PMID:22110744
Kif12	Rat	Tesaglitazar	decreases expression	EXP		6480464	tesaglitazar results in decreased expression of KIF12 mRNA	CTD	PMID:21515302
Kif12	Rat	thioacetamide	multiple interactions	EXP		6480464	[Diethylnitrosamine co-treated with Thioacetamide] results in increased expression of KIF12 mRNA	CTD	PMID:28943392
Kif12	Rat	thioacetamide	increases expression	EXP		6480464	Thioacetamide results in increased expression of KIF12 mRNA	CTD	PMID:34492290
Kif12	Rat	troglitazone	decreases expression	EXP		6480464	troglitazone results in decreased expression of KIF12 mRNA	CTD	PMID:21515302
Kif12	Rat	urethane	decreases expression	ISO	KIF12 (Homo sapiens)	6480464	Urethane results in decreased expression of KIF12 mRNA	CTD	PMID:28818685
Kif12	Rat	valproic acid	decreases expression	ISO	KIF12 (Homo sapiens)	6480464	Valproic Acid results in decreased expression of KIF12 mRNA	CTD	PMID:29154799

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Kif12	Rat	microtubule-based movement	involved_in	IBA	FB:FBgn0000352 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Kif12	Rat	microtubule-based movement	involved_in	IEA	InterPro:IPR001752 more ...	1600115	GO_REF:0000002	InterPro	GO_REF:0000002

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Kif12	Rat	cytoplasm	is_active_in	IBA	FB:FBgn0001308 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Kif12	Rat	cytoskeleton	located_in	IEA	UniProtKB-KW:KW-0206	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Kif12	Rat	cytoskeleton	located_in	IEA	UniProtKB-SubCell:SL-0090	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Kif12	Rat	extracellular exosome	located_in	ISO	KIF12 (Homo sapiens)	1624291	PMID:21082674	RGD	PMID:21082674
Kif12	Rat	kinesin complex	part_of	IBA	FB:FBgn0001308 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Kif12	Rat	microtubule	is_active_in	IBA	FB:FBgn0001308 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Kif12	Rat	microtubule	located_in	IEA	UniProtKB-KW:KW-0493	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Kif12	Rat	microtubule organizing center	located_in	ISO	Kif12 (Mus musculus)	1624291	PMID:22851319	RGD	PMID:22851319

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Kif12	Rat	ATP binding	enables	IEA	UniRule:UR000401007	1600115	GO_REF:0000104	UniProt	GO_REF:0000104
Kif12	Rat	ATP binding	enables	IEA	InterPro:IPR001752 and InterPro:IPR019821	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Kif12	Rat	ATP binding	enables	IEA	UniProtKB-KW:KW-0067	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Kif12	Rat	ATP hydrolysis activity	enables	IBA	MGI:1098226 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Kif12	Rat	cytoskeletal motor activity	enables	IEA	UniRule:UR000401007	1600115	GO_REF:0000104	UniProt	GO_REF:0000104
Kif12	Rat	microtubule binding	enables	IBA	FB:FBgn0000352 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Kif12	Rat	microtubule binding	enables	IEA	InterPro:IPR001752	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Kif12	Rat	microtubule motor activity	enables	IBA	FB:FBgn0001308 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Kif12	Rat	microtubule motor activity	enables	IEA	InterPro:IPR001752 more ...	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Kif12	Rat	nucleotide binding	enables	IEA	UniRule:UR000401007	1600115	GO_REF:0000104	UniProt	GO_REF:0000104
Kif12	Rat	nucleotide binding	enables	IEA	UniProtKB-KW:KW-0547	1600115	GO_REF:0000043	UniProt	GO_REF:0000043

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

PMID:19056867	PMID:21082674	PMID:22851319	PMID:23376485

Kif12
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	81,611,730 - 81,620,977 (-)	NCBI		GRCr8
mRatBN7.2	5	76,596,204 - 76,603,261 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	76,596,208 - 76,602,843 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	78,995,506 - 79,002,141 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	80,812,640 - 80,819,275 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	80,788,149 - 80,794,784 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	79,001,708 - 79,008,370 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	79,001,459 - 79,008,363 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	83,119,952 - 83,126,644 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	80,146,349 - 80,152,996 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	80,151,624 - 80,158,110 (-)	NCBI
Celera	5	75,532,721 - 75,539,356 (-)	NCBI		Celera
Cytogenetic Map	5	q24	NCBI

KIF12
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	114,091,638 - 114,099,292 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	114,086,126 - 114,099,292 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	116,853,918 - 116,861,572 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	115,893,739 - 115,901,158 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	113,933,473 - 113,940,891	NCBI
Celera	9	87,501,219 - 87,508,638 (-)	NCBI		Celera
Cytogenetic Map	9	q32	NCBI
HuRef	9	86,460,244 - 86,467,662 (-)	NCBI		HuRef
CHM1_1	9	117,000,368 - 117,007,780 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	126,290,301 - 126,297,955 (-)	NCBI		T2T-CHM13v2.0

Kif12
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	63,076,185 - 63,090,382 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	63,083,867 - 63,090,368 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	63,157,948 - 63,172,145 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	63,165,630 - 63,172,131 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	62,826,671 - 62,833,165 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	62,651,998 - 62,658,492 (-)	NCBI		MGSCv36	mm8
Celera	4	61,822,180 - 61,828,689 (-)	NCBI		Celera
Cytogenetic Map	4	B3	NCBI
cM Map	4	33.96	NCBI

Kif12
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955419	13,464,230 - 13,471,763 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955419	13,463,861 - 13,470,703 (+)	NCBI	ChiLan1.0	ChiLan1.0

KIF12
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	25,278,541 - 25,295,785 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	25,280,892 - 25,292,830 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	85,189,613 - 85,197,157 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	113,556,850 - 113,564,524 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	113,556,850 - 113,564,524 (-)	Ensembl	panpan1.1		panPan2

KIF12
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	68,361,527 - 68,370,160 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	68,361,565 - 68,369,693 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	66,764,077 - 66,772,674 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	69,484,490 - 69,493,039 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	69,484,528 - 69,492,583 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	68,001,305 - 68,009,808 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	68,032,282 - 68,040,806 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	68,770,390 - 68,778,935 (-)	NCBI		UU_Cfam_GSD_1.0

Kif12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	183,652,884 - 183,661,513 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936487	3,421,646 - 3,427,038 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936487	3,421,646 - 3,428,311 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KIF12
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	254,711,823 - 254,719,615 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	254,711,820 - 254,720,559 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	285,739,011 - 285,748,054 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

KIF12
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	25,486,907 - 25,495,445 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	25,487,832 - 25,495,557 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666035	17,325,694 - 17,333,423 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Kif12
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624760	21,031,158 - 21,037,319 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624760	21,030,841 - 21,041,371 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Kif12
13 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	130
Count of miRNA genes:	106
Interacting mature miRNAs:	113
Transcripts:	ENSRNOT00000010040
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1298067	Scl15	Serum cholesterol level QTL 15	4.8	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	33215665	78215665	Rat
1300115	Hrtrt7	Heart rate QTL 7	2.76		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	5	47869062	90099692	Rat
1357396	Bw44	Body weight QTL 44	4.19		body mass (VT:0001259)	body weight (CMO:0000012)	5	68984307	104251008	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	40128307	148607290	Rat
61380	Edpm5	Estrogen-dependent pituitary mass QTL 5	4.5	0.92	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	5	68984307	104251008	Rat
70212	Niddm25	Non-insulin dependent diabetes mellitus QTL 25	3.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	1	131345958	Rat
634305	Mamtr1	Mammary tumor resistance QTL 1		0.0001	mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	12789751	113558310	Rat
61386	Bp49	Blood pressure QTL 49	16.6		cerebrum integrity trait (VT:0010549)	brain infarction volume (CMO:0001013)	5	60293434	98603051	Rat
1331801	Rf33	Renal function QTL 33	4.149		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	43726656	129132602	Rat
1357402	Bw46	Body weight QTL 46	4.47		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	5	68984307	104251008	Rat
2302381	Bw84	Body weight QTL 84	4.47		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	5	68984307	104251008	Rat
1598807	Glom12	Glomerulus QTL 12	2.7		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	5	33215665	78215665	Rat
1302786	Kidm8	Kidney mass QTL 8	28.15		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	5	33215665	78215665	Rat
61393	Bp7	Blood pressure QTL 7	4.5	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	60293434	161481680	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	46711509	161317411	Rat
7411561	Bw134	Body weight QTL 134	24	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	49463600	94463600	Rat
2303615	Vencon7	Ventilatory control QTL 7		0.001	respiration trait (VT:0001943)	respiration rate (CMO:0000289)	5	50983895	95983895	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	50328551	141643988	Rat
1641912	Alcrsp18	Alcohol response QTL 18			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	35189153	141643988	Rat
1576314	Eutr1	Estrogen induced uterine response QTL 1			uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	2138965	166875058	Rat
1576317	Eutr2	Estrogen induced uterine response QTL 2		0.01	uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	34730116	104251008	Rat
1598845	Mcs14	Mammary carcinoma susceptibility QTL 14		0.0001	mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	76369776	80813390	Rat
7394712	Emca13	Estrogen-induced mammary cancer QTL 13			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	9823266	99753708	Rat
1331773	Scl26	Serum cholesterol level QTL 26	3.065		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	43726656	86724018	Rat
70189	Mcs5	Mammary carcinoma susceptibility QTL 5	10.51		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	55805606	132207589	Rat
1331771	Rf35	Renal function QTL 35	4.36965		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	729470	86724018	Rat
61359	Eaex	Experimental allergic encephalomyelitis QTL x	3		nervous system integrity trait (VT:0010566)	post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)	5	55715622	100715622	Rat
2290448	Scl54	Serum cholesterol level QTL 54	2.93		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	31663789	131345958	Rat
61426	Scl2	Serum cholesterol level QTL 2	7.3	0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	59793399	143070159	Rat
1354598	Srn6	Serum renin concentration QTL 6	3.8		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	5	69540295	151018848	Rat
9589025	Epfw7	Epididymal fat weight QTL 7	20.66	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	5	49463600	94463600	Rat
2303574	Gluco42	Glucose level QTL 42	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	53496719	98496719	Rat
2290005	Mcs24	Mammary carcinoma susceptibility QTL 24			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	64719390	109719390	Rat
1331756	Rf34	Renal function QTL 34	4.16275		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	1	90450412	Rat
2306971	Anxrr21	Anxiety related response QTL 21	9.47		fear/anxiety-related behavior trait (VT:1000241)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	5	66174080	124160948	Rat
2316954	Rf57	Renal function QTL 57	0		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	5	59793528	90450144	Rat
1358895	Bp254	Blood pressure QTL 254	3.6	0.0003	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	5	58829236	128034027	Rat
2316959	Gluco59	Glucose level QTL 59	4.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	34944474	113558310	Rat
2312671	Scl64	Serum cholesterol level QTL 64		0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	68984307	104251008	Rat
2316957	Pur21	Proteinuria QTL 21	6.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	5	59793528	113558156	Rat

RH136870

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	76,596,254 - 76,596,461 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	79,001,759 - 79,001,965	NCBI	Rnor6.0
Rnor_5.0	5	83,120,003 - 83,120,209	UniSTS	Rnor5.0
RGSC_v3.4	5	80,146,396 - 80,146,602	UniSTS	RGSC3.4
Celera	5	75,532,768 - 75,532,974	UniSTS
RH 3.4 Map	5	579.2	UniSTS
Cytogenetic Map	5	q24	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	4	24	29	76	83	59	14	59	2	160	43	22	45	59	24


RefSeq Transcripts	NM_001012102	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238253	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC085798	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473978	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000010040 ⟹ ENSRNOP00000010040

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	76,596,208 - 76,602,843 (-)	Ensembl
Rnor_6.0 Ensembl	5	79,001,459 - 79,008,363 (-)	Ensembl

RefSeq Acc Id:

NM_001012102 ⟹ NP_001012102

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,611,734 - 81,618,369 (-)	NCBI
mRatBN7.2	5	76,596,208 - 76,602,843 (-)	NCBI
Rnor_6.0	5	79,001,712 - 79,008,347 (-)	NCBI
Rnor_5.0	5	83,119,952 - 83,126,644 (-)	NCBI
RGSC_v3.4	5	80,146,349 - 80,152,996 (-)	RGD
Celera	5	75,532,721 - 75,539,356 (-)	RGD

Sequence:

show sequence

TGAGGAGGGGGATGTATGTAAGGTGTGTCTGGACAGTCTTGCTGTGGTGACTGGGAGGCATATTGGAAAGGGAAAGGAATCGTGTGCAGTACAAGACATGGAGGAACGTGGGTCTCCCGATGGGGACC
CTGCACGGAACCTGGAGCAAGGGCCAGAAGGATCAGAAACCCCTATTCAAGTGGTGCTCAGGGTGCGTCCCATGAGCACAGTGGAGCTGCGTAGAGGGGAGCAGAGTGCACTGCACTGCTCGGGGACC
CGGACGCTGCAGGTGAGCCCTCCGGGTGGGGGCCCCGACGTGGCGTTCCGCTTCGGTGCCGTACTGGACGGGGCGCGCACACAGGAGGACGTGTTCAGAGCTTGCGGTGTGAAGCGCCTGGGCGAGCT
GGCGCTGCGTGGTTTCTCCTGCACCGTCTTCACTTTTGGCCAGACTGGTTCCGGGAAAACCTACACTCTGACTGGACCTCCTCCTCAGGCAGAAGGGGTGCCCGTGCCCCCCAGCCTTGCTGGCATTA
TGCAGAGGACCTTCACCTGGCTATTAGATCGCATGCAGCACCTGGATTCTCCAGTCACCCTCCGAGCCTCCTACCTGGAGATCTACAATGAGCAGGTTCAGGACTTGCTGAGTCAGGGGTCTCCCCGG
CCTCTGCCTGTTAGGTGGTCCAAGGCACGAGGCTTCTATGTGGAACAGCTTCGGTTGGTGGAGTGTGGCAGTCTGGAAGCTTTGATGGAACTATTGCAGATGGGTCTCAGCCGTCGCCGGAGCTCCTC
GCATACCTTGAACCAGGCCTCCAGCAGAAGCCATGCCCTGCTCACACTCCACATCAGCCGCCCAACTTCTCAGCAGGTACCTCCTGTGGACCTTGGGGAGCCCCCTGTTGGAGGAAAGCTGTGCTTCG
TGGACCTTGCAGGCAGTGAGAAGGTGGCAGCCACGGGGTCCAGAGGGCAGCTGATGCTTGAGGCCAATAGCATTAACCGCAGCCTATTGGCACTGGGCCACTGCATCTCCCTGCTGTTGGACCCACAG
AGGAAGCAGAGCCACATCCCCTTCCGGGACAGCAAGCTCACCAAATTGCTGGCAGACTCACTTGGGGGCCGTGGGGTCACGCTCATGGTTGCCTGCGTATCCCCTTCAGCACAGTGCCTTCCCGAGAC
CCTCAGCACTCTGCGATACGCAAGCCGAGCTCAGCGGATCACCACCCGGCCACAGGGTCCCAAGTCCCCTGCAGTAAAGCCACCCCAGCAAGTAGAGGCCGAGCTGCTACAGCTCCAAGAGGAGAATC
GTTGCCTGCGGCTCCAGTTGGATCAAATGTACACTAAGGCACCGAGAGTCCACGGAGCCCGGGTGGCCTGGGCCCAGCGGAACCTCTATGGGATGCTGCAGGAGTTCATGCTGGAGAATGAGAAGCTC
AGGAAGGAAATGAGACAGCTTCGGAGTAGCCGGGACCTGGCCCAGGCAGAGCAGCATGTCCTGGCCCAGCAGATCCATGAACTGGAGAGGCGCCTCCTTTTGGCTTGCTCCCTTCCCCAGCAGACCTC
TGCCACCGTGTGCCCCTGCAGGATGACTCCAGCTGCCTCCTGCCATGTACTGCCACCCCTCTGCTACTGCTATCACCTCTGTCCTCTGTGCCGAGTGTCCTTGACCCACTGGGCCTGCCCATGGAGAG
AATGCCATGCACCACAGGTGCTGGAGCCTGAGGCCCCAGGCCACATATCTCCATCTGTGCGGCCCCCACCCTGGGCACCTCCAACAAGCCCAGGCTCTGCCAAGCCCCCACAAGAGAGGAACCATAGT
GACTGGACACAGACACGAGTCCTGGCAGAGATGCTGATGGGAGAGGAAGTGGTACCCTCTGCACCACCCCTGCCTGCAGGGCCCTCAAACATGCCACAAGTGCTAAGAGGAGGATCTGGGATCCCAAA
CCAGACCCCAAGACTGGAAACCCTCACACACCAGATCAACAGCTCCCTGAACCCCAGCCAGAGACAACCACAGCCCAGCGAGGACACACAGAGCCCTGGCCAAGGCCTCTCTTCTTATTAAAGATTGC
CAGACTGGCTGTGCCCACTGGGTCTCCATCTCTCTGTCTGTGAACTGGAAAGAAAAGTTGCTGGACAGAGCTGGGGAATCCTAGGGAGGTTCAGGGCCCCTGACCCCAGACCTGAGGCTGGGTTCACA
ATATGCTGTAAGTGGGTGGGGAAATCTGAATAAAGAGAGGCATGAGTCCTAA

hide sequence

RefSeq Acc Id:

XM_006238253 ⟹ XP_006238315

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,611,730 - 81,620,977 (-)	NCBI
mRatBN7.2	5	76,596,204 - 76,603,261 (-)	NCBI
Rnor_6.0	5	79,001,708 - 79,008,370 (-)	NCBI
Rnor_5.0	5	83,119,952 - 83,126,644 (-)	NCBI

Sequence:

show sequence

CTGGATGACTGGCAGTGGGAGACTGAGGAGGGGGATGTATGTAAGGTGTGTCTGGACAGTCTTG
CTGTGGTGACTGGGAGGCATATTGGAAAGGGAAAGGAATCGTGTGCAGTACAAGACATGGAGGAACGTGGGTCTCCCGATGGGGACCCTGCACGGAACCTGGAGCAAGGGCCAGAAGGATCAGAAACC
CCTATTCAAGTGGTGCTCAGGGTGCGTCCCATGAGCACAGTGGAGCTGCGTAGAGGGGAGCAGAGTGCACTGCACTGCTCGGGGACCCGGACGCTGCAGGTGAGCCCTCCGGGTGGGGGCCCCGACGT
GGCGTTCCGCTTCGGTGCCGTACTGGACGGGGCGCGCACACAGGAGGACGTGTTCAGAGCTTGCGGTGTGAAGCGCCTGGGCGAGCTGGCGCTGCGTGGTTTCTCCTGCACCGTCTTCACTTTTGGCC
AGACTGGTTCCGGGAAAACCTACACTCTGACTGGACCTCCTCCTCAGGCAGAAGGGGTGCCCGTGCCCCCCAGCCTTGCTGGCATTATGCAGAGGACCTTCACCTGGCTATTAGATCGCATGCAGCAC
CTGGATTCTCCAGTCACCCTCCGAGCCTCCTACCTGGAGATCTACAATGAGCAGGTTCAGGACTTGCTGAGTCAGGGGTCTCCCCGGCCTCTGCCTGTTAGGTGGTCCAAGGCACGAGGCTTCTATGT
GGAACAGCTTCGGTTGGTGGAGTGTGGCAGTCTGGAAGCTTTGATGGAACTATTGCAGATGGGTCTCAGCCGTCGCCGGAGCTCCTCGCATACCTTGAACCAGGCCTCCAGCAGAAGCCATGCCCTGC
TCACACTCCACATCAGCCGCCCAACTTCTCAGCAGGTACCTCCTGTGGACCTTGGGGAGCCCCCTGTTGGAGGAAAGCTGTGCTTCGTGGACCTTGCAGGCAGTGAGAAGGTGGCAGCCACGGGGTCC
AGAGGGCAGCTGATGCTTGAGGCCAATAGCATTAACCGCAGCCTATTGGCACTGGGCCACTGCATCTCCCTGCTGTTGGACCCACAGAGGAAGCAGAGCCACATCCCCTTCCGGGACAGCAAGCTCAC
CAAATTGCTGGCAGACTCACTTGGGGGCCGTGGGGTCACGCTCATGGTTGCCTGCGTATCCCCTTCAGCACAGTGCCTTCCCGAGACCCTCAGCACTCTGCGATACGCAAGCCGAGCTCAGCGGATCA
CCACCCGGCCACAGGGTCCCAAGTCCCCTGCAGTAAAGCCACCCCAGCAAGTAGAGGCCGAGCTGCTACAGCTCCAAGAGGAGAATCGTTGCCTGCGGCTCCAGTTGGATCAAATGTACACTAAGGCA
CCGAGAGTCCACGGAGCCCGGGTGGCCTGGGCCCAGCGGAACCTCTATGGGATGCTGCAGGAGTTCATGCTGGAGAATGAGAAGCTCAGGAAGGAAATGAGACAGCTTCGGAGTAGCCGGGACCTGGC
CCAGGCAGAGCAGCATGTCCTGGCCCAGCAGATCCATGAACTGGAGAGGCGCCTCCTTTTGGCTTGCTCCCTTCCCCAGCAGACCTCTGCCACCGTGTGCCCCTGCAGGATGACTCCAGCTGCCTCCT
GCCATGTACTGCCACCCCTCTGCTACTGCTATCACCTCTGTCCTCTGTGCCGAGTGTCCTTGACCCACTGGGCCTGCCCATGGAGAGAATGCCATGCACCACAGCAGGTGCTGGAGCCTGAGGCCCCA
GGCCACATATCTCCATCTGTGCGGCCCCCACCCTGGGCACCTCCAACAAGCCCAGGCTCTGCCAAGCCCCCACAAGAGAGGAACCATAGTGACTGGACACAGACACGAGTCCTGGCAGAGATGCTGAT
GGGAGAGGAAGTGGTACCCTCTGCACCACCCCTGCCTGCAGGGCCCTCAAACATGCCACAAGTGCTAAGAGGAGGATCTGGGATCCCAAACCAGACCCCAAGACTGGAAACCCTCACACACCAGATCA
ACAGCTCCCTGAACCCCAGCCAGAGACAACCACAGCCCAGCGAGGACACACAGAGCCCTGGCCAAGGCCTCTCTTCTTATTAAAGATTGCCAGACTGGCTGTGCCCACTGGGTCTCCATCTCTCTGTC
TGTGAACTGGAAAGAAAAGTTGCTGGACAGAGCTGGGGAATCCTAGGGAGGTTCAGGGCCCCTGACCCCAGACCTGAGGCTGGGTTCACAATATGCTGTAAGTGGGTGGGGAAATCTGAATAAAGAGA
GGCATGAGTCCTAACCTA

hide sequence

RefSeq Acc Id:

XM_063287632 ⟹ XP_063143702

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,611,730 - 81,617,874 (-)	NCBI


Protein RefSeqs	NP_001012102	(Get FASTA)	NCBI Sequence Viewer
	XP_006238315	(Get FASTA)	NCBI Sequence Viewer
	XP_063143702	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH85798	(Get FASTA)	NCBI Sequence Viewer
	EDM10531	(Get FASTA)	NCBI Sequence Viewer
	EDM10532	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000010040
	ENSRNOP00000010040.5

RefSeq Acc Id:

NP_001012102 ⟸ NM_001012102

- UniProtKB:

A6J7X5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEERGSPDGDPARNLEQGPEGSETPIQVVLRVRPMSTVELRRGEQSALHCSGTRTLQVSPPGGGPDVAFRFGAVLDGARTQEDVFRACGVKRLGELALRGFSCTVFTFGQTGSGKTYTLTGPPPQAEG
VPVPPSLAGIMQRTFTWLLDRMQHLDSPVTLRASYLEIYNEQVQDLLSQGSPRPLPVRWSKARGFYVEQLRLVECGSLEALMELLQMGLSRRRSSSHTLNQASSRSHALLTLHISRPTSQQVPPVDLG
EPPVGGKLCFVDLAGSEKVAATGSRGQLMLEANSINRSLLALGHCISLLLDPQRKQSHIPFRDSKLTKLLADSLGGRGVTLMVACVSPSAQCLPETLSTLRYASRAQRITTRPQGPKSPAVKPPQQVE
AELLQLQEENRCLRLQLDQMYTKAPRVHGARVAWAQRNLYGMLQEFMLENEKLRKEMRQLRSSRDLAQAEQHVLAQQIHELERRLLLACSLPQQTSATVCPCRMTPAASCHVLPPLCYCYHLCPLCRV
SLTHWACPWRECHAPQVLEPEAPGHISPSVRPPPWAPPTSPGSAKPPQERNHSDWTQTRVLAEMLMGEEVVPSAPPLPAGPSNMPQVLRGGSGIPNQTPRLETLTHQINSSLNPSQRQPQPSEDTQSP
GQGLSSY

hide sequence

RefSeq Acc Id:	XP_006238315 ⟸ XM_006238253
- Peptide Label:	isoform X1
- UniProtKB:	G3V6Y3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEERGSPDGDPARNLEQGPEGSETPIQVVLRVRPMSTVELRRGEQSALHCSGTRTLQVSPPGGG PDVAFRFGAVLDGARTQEDVFRACGVKRLGELALRGFSCTVFTFGQTGSGKTYTLTGPPPQAEGVPVPPSLAGIMQRTFTWLLDRMQHLDSPVTLRASYLEIYNEQVQDLLSQGSPRPLPVRWSKARG FYVEQLRLVECGSLEALMELLQMGLSRRRSSSHTLNQASSRSHALLTLHISRPTSQQVPPVDLGEPPVGGKLCFVDLAGSEKVAATGSRGQLMLEANSINRSLLALGHCISLLLDPQRKQSHIPFRDS KLTKLLADSLGGRGVTLMVACVSPSAQCLPETLSTLRYASRAQRITTRPQGPKSPAVKPPQQVEAELLQLQEENRCLRLQLDQMYTKAPRVHGARVAWAQRNLYGMLQEFMLENEKLRKEMRQLRSSR DLAQAEQHVLAQQIHELERRLLLACSLPQQTSATVCPCRMTPAASCHVLPPLCYCYHLCPLCRVSLTHWACPWRECHAPQQVLEPEAPGHISPSVRPPPWAPPTSPGSAKPPQERNHSDWTQTRVLAE MLMGEEVVPSAPPLPAGPSNMPQVLRGGSGIPNQTPRLETLTHQINSSLNPSQRQPQPSEDTQSPGQGLSSY hide sequence

Ensembl Acc Id:

ENSRNOP00000010040 ⟸ ENSRNOT00000010040

RefSeq Acc Id:	XP_063143702 ⟸ XM_063287632
- Peptide Label:	isoform X2

Protein Domains

Kinesin motor

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-G3V6Y3-F1-model_v2	AlphaFold	G3V6Y3	1-648	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

RGD ID:

13693799

Promoter ID:

EPDNEW_R4324

Type:

multiple initiation site

Name:

Kif12_1

Description:

kinesin family member 12

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	79,008,357 - 79,008,417	EPDNEW

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-41075	BioCyc
Ensembl Genes	ENSRNOG00000007080	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000010040	ENTREZGENE
	ENSRNOT00000010040.6	UniProtKB/TrEMBL
Gene3D-CATH	3.40.850.10	UniProtKB/TrEMBL
InterPro	Kinesin-like_fam	UniProtKB/TrEMBL
	Kinesin_motor_CS	UniProtKB/TrEMBL
	Kinesin_motor_dom	UniProtKB/TrEMBL
	Kinesin_motor_dom_sf	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
KEGG Report	rno:313254	UniProtKB/TrEMBL
NCBI Gene	313254	ENTREZGENE
PANTHER	CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED	UniProtKB/TrEMBL
	KINESIN-LIKE PROTEIN	UniProtKB/TrEMBL
Pfam	Kinesin	UniProtKB/TrEMBL
PhenoGen	Kif12	PhenoGen
PRINTS	KINESINHEAVY	UniProtKB/TrEMBL
PROSITE	KINESIN_MOTOR_DOMAIN1	UniProtKB/TrEMBL
	KINESIN_MOTOR_DOMAIN2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000007080	RatGTEx
SMART	KISc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
UniProt	A6J7X5	ENTREZGENE, UniProtKB/TrEMBL
	A6J7X6_RAT	UniProtKB/TrEMBL
	G3V6Y3	ENTREZGENE, UniProtKB/TrEMBL
	Q5U2Z6_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-12-06	Kif12	kinesin family member 12	Kif12_predicted	kinesin family member 12 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Kif12_predicted	kinesin family member 12 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM