Baiap2l1 (BAR/IMD domain containing adaptor protein 2 like 1) - Rat Genome Database

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Gene: Baiap2l1 (BAR/IMD domain containing adaptor protein 2 like 1) Rattus norvegicus
Analyze
Symbol: Baiap2l1
Name: BAR/IMD domain containing adaptor protein 2 like 1
RGD ID: 1308452
Description: Predicted to enable proline-rich region binding activity. Predicted to be involved in actin crosslink formation; actin filament bundle assembly; and positive regulation of actin filament polymerization. Predicted to be located in cytoplasm and cytoskeleton. Predicted to be active in cytosol and nucleoplasm. Predicted to colocalize with actin cytoskeleton. Orthologous to human BAIAP2L1 (BAR/IMD domain containing adaptor protein 2 like 1); INTERACTS WITH 17beta-estradiol; 3-chloropropane-1,2-diol; alpha-Zearalanol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: BAI1-associated protein 2-like 1; BAI1-associated protein 2-like protein 1; BAR/IMD domain-containing adapter protein 2-like 1; brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1; LOC304282; MGC124996; RGD1308452; similar to RIKEN cDNA 1300006M19
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81215,364,090 - 15,453,602 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1215,364,109 - 15,453,605 (+)EnsemblGRCr8
mRatBN7.21210,250,434 - 10,339,937 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1210,250,473 - 10,339,928 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1211,057,724 - 11,147,159 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01211,681,004 - 11,770,446 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01210,704,737 - 10,794,201 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01212,226,967 - 12,321,172 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1212,227,010 - 12,321,172 (+)Ensemblrn6Rnor6.0
Rnor_5.01214,285,428 - 14,373,560 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41210,584,749 - 10,668,948 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1212,049,051 - 12,139,941 (+)NCBICelera
RGSC_v3.11210,614,677 - 10,698,850 (+)NCBI
Cytogenetic Map12p11NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
3-chloropropane-1,2-diol  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
5-aza-2'-deoxycytidine  (ISO)
acrylamide  (ISO)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (EXP)
amiodarone  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
azathioprine  (ISO)
benzo[a]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
buspirone  (EXP)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (ISO)
ciguatoxin CTX1B  (ISO)
cisplatin  (ISO)
clofibrate  (ISO)
copper(II) sulfate  (ISO)
coumarin  (ISO)
cyclosporin A  (ISO)
cytarabine  (ISO)
diarsenic trioxide  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (ISO)
dorsomorphin  (ISO)
ethyl methanesulfonate  (ISO)
fipronil  (EXP)
flutamide  (EXP)
formaldehyde  (ISO)
FR900359  (ISO)
furan  (EXP)
gentamycin  (EXP)
glyphosate  (ISO)
Indeno[1,2,3-cd]pyrene  (ISO)
ivermectin  (ISO)
lead diacetate  (EXP)
lead(0)  (ISO)
lipopolysaccharide  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
methylparaben  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
Monobutylphthalate  (ISO)
nefazodone  (EXP)
nickel sulfate  (ISO)
okadaic acid  (ISO)
paracetamol  (ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctanoic acid  (EXP,ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
phorone  (EXP)
pirinixic acid  (ISO)
potassium chromate  (ISO)
potassium dichromate  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
tamoxifen  (ISO)
temozolomide  (ISO)
tetrachloromethane  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
tributylstannane  (EXP)
triclosan  (ISO)
triphenyl phosphate  (ISO)
trovafloxacin  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
actin cytoskeleton  (IEA,ISO,ISS)
cytoskeleton  (IEA)
cytosol  (IBA,IEA,ISO,ISS)
nucleoplasm  (IBA)
plasma membrane  (IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
3. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:12477932   PMID:15489334   PMID:19056867   PMID:19366662   PMID:21098279   PMID:23533145   PMID:25468996  


Genomics

Comparative Map Data
Baiap2l1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81215,364,090 - 15,453,602 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1215,364,109 - 15,453,605 (+)EnsemblGRCr8
mRatBN7.21210,250,434 - 10,339,937 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1210,250,473 - 10,339,928 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1211,057,724 - 11,147,159 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01211,681,004 - 11,770,446 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01210,704,737 - 10,794,201 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01212,226,967 - 12,321,172 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1212,227,010 - 12,321,172 (+)Ensemblrn6Rnor6.0
Rnor_5.01214,285,428 - 14,373,560 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41210,584,749 - 10,668,948 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1212,049,051 - 12,139,941 (+)NCBICelera
RGSC_v3.11210,614,677 - 10,698,850 (+)NCBI
Cytogenetic Map12p11NCBI
BAIAP2L1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38798,291,650 - 98,401,090 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl798,291,648 - 98,401,115 (-)Ensemblhg38GRCh38
GRCh37797,920,962 - 98,030,402 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36797,760,491 - 97,868,316 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34797,567,206 - 97,675,031NCBI
Celera792,614,864 - 92,724,061 (-)NCBICelera
Cytogenetic Map7q21.3-q22.1NCBI
HuRef792,521,351 - 92,630,267 (-)NCBIHuRef
CHM1_1797,850,970 - 97,960,506 (-)NCBICHM1_1
T2T-CHM13v2.0799,522,397 - 99,632,094 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2797,245,828 - 97,354,031 (-)NCBI
Baiap2l1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395144,201,335 - 144,294,922 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5144,201,336 - 144,294,922 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm385144,264,525 - 144,358,112 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5144,264,526 - 144,358,112 (-)Ensemblmm10GRCm38
MGSCv375145,025,394 - 145,118,981 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv365144,518,056 - 144,611,639 (-)NCBIMGSCv36mm8
MGSCv365143,346,452 - 143,439,351 (-)NCBIMGSCv36mm8
Celera5141,249,540 - 141,346,960 (-)NCBICelera
Cytogenetic Map5G2NCBI
cM Map583.24NCBI
Baiap2l1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546014,176,111 - 14,258,971 (-)Ensembl
ChiLan1.0NW_00495546014,174,592 - 14,259,416 (-)NCBIChiLan1.0ChiLan1.0
BAIAP2L1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26116,137,946 - 116,249,259 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan17164,404,176 - 164,513,855 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v076,158,306 - 6,230,903 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17103,756,605 - 103,828,928 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7103,758,479 - 103,828,874 (-)EnsemblpanPan2panpan1.1
BAIAP2L1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1610,968,100 - 11,055,040 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl610,968,060 - 11,053,494 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha612,594,567 - 12,681,506 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0610,968,507 - 11,055,586 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl610,968,586 - 11,055,601 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1610,837,455 - 10,924,306 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0610,817,042 - 10,904,097 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0611,051,039 - 11,138,148 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Baiap2l1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344139,026,939 - 139,116,072 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936750826,818 - 918,322 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936750829,188 - 918,316 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BAIAP2L1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl35,472,315 - 5,567,876 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.135,472,305 - 5,567,926 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.235,527,682 - 5,617,856 (-)NCBISscrofa10.2Sscrofa10.2susScr3
BAIAP2L1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12814,769,302 - 14,876,121 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660701,199,985 - 1,311,915 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Baiap2l1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474031,860,161 - 31,949,820 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474031,858,557 - 31,949,709 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Baiap2l1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1168,829,780 - 8,918,469 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Baiap2l1
384 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:227
Count of miRNA genes:161
Interacting mature miRNAs:172
Transcripts:ENSRNOT00000060843
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12592191825247790Rat
70213Niddm27Non-insulin dependent diabetes mellitus QTL 273.72blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121120049452308831Rat
2306789Ean6Experimental allergic neuritis QTL 64.9nervous system integrity trait (VT:0010566)experimental autoimmune neuritis severity score (CMO:0001528)12129775522Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)121120049452308831Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)121120049452308831Rat
1357337Gluco3Glucose level QTL 30.0004adipocyte glucose uptake trait (VT:0004185)absolute change in adipocyte glucose uptake (CMO:0000873)12116966671Rat
5684888Pia42Pristane induced arthritis QTL 42joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12348941648489416Rat
1331739Hrtrt14Heart rate QTL 143.56232heart pumping trait (VT:2000009)heart rate (CMO:0000002)12138687564Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)121120049752308831Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)121526424852308831Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)12133700600Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)121174352852308831Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)121120049452308831Rat
1581516Cm56Cardiac mass QTL 564.20.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)121186960016966542Rat
61334Gluco17Glucose level QTL 176.3adipocyte glucose uptake trait (VT:0004185)adipocyte maximal glucose uptake to basal glucose uptake ratio (CMO:0000874)12116966671Rat
2293684Bmd26Bone mineral density QTL 264.40.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)12138635130Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12128133365Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)121223300030490641Rat
1300174Bw15Body weight QTL 152.93body mass (VT:0001259)body weight loss (CMO:0001399)12128606299Rat
1331787Rf41Renal function QTL 412.998kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)12133700556Rat
724526Uae3Urinary albumin excretion QTL 34.90.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)12115486827Rat
1331763Wbc2White blood cell count QTL 23.162leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)121120049452308831Rat
7204484Bp358Blood pressure QTL 3580.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)12124849755Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)61120049452308831Rat
7387292Kidm42Kidney mass QTL 423.030.0004kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)12141361854Rat
1298081Cia25Collagen induced arthritis QTL 254.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12274769447747694Rat
2303568Bw88Body weight QTL 883body mass (VT:0001259)body weight (CMO:0000012)12128606299Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12308718048087180Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)121120049452308831Rat
7243862Mcs30Mammary carcinoma susceptibility QTL 308.62mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)12563330650633306Rat
2293086Iddm30Insulin dependent diabetes mellitus QTL 303.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)12790162533938215Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)121120049452308831Rat

Markers in Region
RH128970  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21210,339,749 - 10,339,901 (+)MAPPERmRatBN7.2
Rnor_6.01212,320,986 - 12,321,137NCBIRnor6.0
Rnor_5.01214,373,374 - 14,373,525UniSTSRnor5.0
RGSC_v3.41210,668,761 - 10,668,912UniSTSRGSC3.4
Celera1212,139,755 - 12,139,906UniSTS
Cytogenetic Map12p11UniSTS
AU046504  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21210,300,873 - 10,301,037 (+)MAPPERmRatBN7.2
Rnor_6.01212,277,629 - 12,277,792NCBIRnor6.0
Rnor_5.01214,335,272 - 14,335,435UniSTSRnor5.0
RGSC_v3.41210,629,523 - 10,629,686UniSTSRGSC3.4
Cytogenetic Map12p11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 161 91 90 59 88 59 6 352 188 11 140 81 92 31 16 16

Sequence


Ensembl Acc Id: ENSRNOT00000060843   ⟹   ENSRNOP00000057568
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1215,364,109 - 15,453,605 (+)Ensembl
mRatBN7.2 Ensembl1210,250,473 - 10,339,925 (+)Ensembl
Rnor_6.0 Ensembl1212,227,010 - 12,321,172 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000092440
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1212,264,619 - 12,265,272 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000092610   ⟹   ENSRNOP00000075796
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1215,364,109 - 15,445,114 (+)Ensembl
mRatBN7.2 Ensembl1210,278,320 - 10,339,928 (+)Ensembl
Rnor_6.0 Ensembl1212,227,095 - 12,321,172 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000135774   ⟹   ENSRNOP00000103671
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1215,364,109 - 15,453,408 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000137831   ⟹   ENSRNOP00000099490
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1215,364,109 - 15,444,862 (+)Ensembl
RefSeq Acc Id: NM_001034140   ⟹   NP_001029312
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81215,364,154 - 15,453,602 (+)NCBI
mRatBN7.21210,250,478 - 10,339,936 (+)NCBI
Rnor_6.01212,227,014 - 12,321,172 (+)NCBI
Rnor_5.01214,285,428 - 14,373,560 (+)NCBI
RGSC_v3.41210,584,749 - 10,668,948 (+)RGD
Celera1212,049,051 - 12,139,941 (+)RGD
Sequence:
RefSeq Acc Id: XM_017598315   ⟹   XP_017453804
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81215,364,090 - 15,453,602 (+)NCBI
mRatBN7.21210,250,434 - 10,339,937 (+)NCBI
Rnor_6.01212,226,967 - 12,321,172 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039089346   ⟹   XP_038945274
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81215,424,812 - 15,453,602 (+)NCBI
mRatBN7.21210,310,019 - 10,339,937 (+)NCBI
RefSeq Acc Id: XM_063271253   ⟹   XP_063127323
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81215,364,106 - 15,453,602 (+)NCBI
RefSeq Acc Id: XM_063271254   ⟹   XP_063127324
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81215,364,106 - 15,453,602 (+)NCBI
RefSeq Acc Id: NP_001029312   ⟸   NM_001034140
- UniProtKB: Q5FWT2 (UniProtKB/Swiss-Prot),   Q3KR97 (UniProtKB/Swiss-Prot),   A0A8L2QTC2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017453804   ⟸   XM_017598315
- Peptide Label: isoform X1
- UniProtKB: A0A8L2QTC2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000075796   ⟸   ENSRNOT00000092610
Ensembl Acc Id: ENSRNOP00000057568   ⟸   ENSRNOT00000060843
RefSeq Acc Id: XP_038945274   ⟸   XM_039089346
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063127323   ⟸   XM_063271253
- Peptide Label: isoform X2
- UniProtKB: A0A8L2RB03 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127324   ⟸   XM_063271254
- Peptide Label: isoform X3
Ensembl Acc Id: ENSRNOP00000099490   ⟸   ENSRNOT00000137831
Ensembl Acc Id: ENSRNOP00000103671   ⟸   ENSRNOT00000135774
Protein Domains
IMD   SH3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q3KR97-F1-model_v2 AlphaFold Q3KR97 1-516 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698424
Promoter ID:EPDNEW_R8949
Type:initiation region
Name:Baiap2l1_1
Description:BAI1-associated protein 2-like 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01212,227,003 - 12,227,063EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308452 AgrOrtholog
BioCyc Gene G2FUF-20038 BioCyc
Ensembl Genes ENSRNOG00000001007 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000060843 ENTREZGENE
  ENSRNOT00000092610 ENTREZGENE
Gene3D-CATH 1.20.1270.60 UniProtKB/Swiss-Prot
  SH3 Domains UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7303117 IMAGE-MGC_LOAD
  IMAGE:7367101 IMAGE-MGC_LOAD
InterPro AH/BAR_dom_sf UniProtKB/Swiss-Prot
  Baiap2l1_I-BAR_dom UniProtKB/Swiss-Prot
  I-BAR_dom UniProtKB/Swiss-Prot
  IRSp53/IRTKS/Pinkbar UniProtKB/Swiss-Prot
  IRTKS_SH3 UniProtKB/Swiss-Prot
  SH3-like_dom_sf UniProtKB/Swiss-Prot
  SH3_domain UniProtKB/Swiss-Prot
KEGG Report rno:304282 UniProtKB/Swiss-Prot
MGC_CLONE MGC:105537 IMAGE-MGC_LOAD
  MGC:124996 IMAGE-MGC_LOAD
NCBI Gene 304282 ENTREZGENE
PANTHER PTHR14206 UniProtKB/Swiss-Prot
  PTHR14206:SF4 UniProtKB/Swiss-Prot
Pfam IMD UniProtKB/Swiss-Prot
  SH3_9 UniProtKB/Swiss-Prot
PhenoGen Baiap2l1 PhenoGen
PROSITE IMD UniProtKB/Swiss-Prot
  SH3 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000001007 RatGTEx
SMART SH3 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF103657 UniProtKB/Swiss-Prot
  SSF50044 UniProtKB/Swiss-Prot
UniProt A0A8L2QTC2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8L2RB03 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0L4Z6_RAT UniProtKB/TrEMBL
  A0ABK0LR32_RAT UniProtKB/TrEMBL
  A6K1H6_RAT UniProtKB/TrEMBL
  BI2L1_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q5FWT2 ENTREZGENE
UniProt Secondary Q5FWT2 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-08-13 Baiap2l1  BAR/IMD domain containing adaptor protein 2 like 1  Baiap2l1  BAI1-associated protein 2-like 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-30 Baiap2l1  BAI1-associated protein 2-like 1  RGD1308452  similar to RIKEN cDNA 1300006M19  Symbol and Name updated 1299863 APPROVED
2005-12-06 RGD1308452  similar to RIKEN cDNA 1300006M19  RGD1308452_predicted  similar to RIKEN cDNA 1300006M19 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-20 RGD1308452_predicted  similar to RIKEN cDNA 1300006M19 (predicted)  LOC304282_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC304282_predicted  similar to RIKEN cDNA 1300006M19 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL