Ptpa (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 3 | 34,087,637 - 34,118,100 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 13,689,742 - 13,720,287 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 13,689,741 - 13,722,549 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 16,761,350 - 16,791,813 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 25,346,312 - 25,376,773 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 23,592,281 - 23,622,965 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 8,982,122 - 9,012,585 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 8,982,122 - 9,012,585 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 14,334,896 - 14,365,358 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 9,461,718 - 9,492,181 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 9,472,909 - 9,491,620 (+) | NCBI | | | | | Celera | 3 | 8,456,362 - 8,486,834 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | p12 | NCBI | | | | |
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PTPA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 9 | 129,110,950 - 129,148,946 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 9 | 129,110,950 - 129,148,946 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 9 | 131,873,229 - 131,911,225 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 9 | 130,913,065 - 130,951,044 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 9 | 128,953,166 - 128,990,777 | NCBI | | | | | Celera | 9 | 102,525,511 - 102,563,513 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | q34.11 | NCBI | | | | | HuRef | 9 | 101,480,193 - 101,518,132 (+) | NCBI | | HuRef | | | CHM1_1 | 9 | 132,024,045 - 132,062,045 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 9 | 141,314,397 - 141,352,390 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Ptpa (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 30,306,062 - 30,337,819 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 30,306,051 - 30,337,818 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 30,416,050 - 30,447,807 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 30,416,039 - 30,447,806 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 30,271,570 - 30,303,327 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 30,238,059 - 30,269,813 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 30,120,848 - 30,152,502 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | B | NCBI | | | | | cM Map | 2 | 21.71 | NCBI | | | | |
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Ptpa (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955570 | 1,429,316 - 1,455,562 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955570 | 1,429,316 - 1,454,820 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PTPA (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 11 | 10,202,540 - 10,240,224 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 9 | 10,204,886 - 10,242,570 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 9 | 100,236,607 - 100,274,273 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 9 | 128,896,584 - 128,934,651 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 9 | 128,896,584 - 128,934,651 (+) | Ensembl | panpan1.1 | | panPan2 | |
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PTPA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 9 | 54,535,186 - 54,568,632 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 9 | 54,536,180 - 54,566,235 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 9 | 53,730,775 - 53,764,220 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 9 | 55,430,817 - 55,464,245 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 9 | 55,426,235 - 55,461,851 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 9 | 54,217,697 - 54,250,902 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 9 | 54,529,536 - 54,562,790 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 9 | 54,623,019 - 54,656,500 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Ptpa (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404947 | 196,768,400 - 196,795,560 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936487 | 16,542,888 - 16,564,646 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936487 | 16,536,740 - 16,564,087 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PTPA (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 1 | 269,401,514 - 269,431,462 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 269,401,776 - 269,431,465 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 303,417,989 - 303,447,667 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PTPA (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 12 | 9,017,533 - 9,056,856 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 12 | 9,019,024 - 9,056,703 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666096 | 506,991 - 549,730 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ptpa (Heterocephalus glaber - naked mole-rat) |
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