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Gene: Rps6ka5 (ribosomal protein S6 kinase A5) Rattus norvegicus

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Symbol:

Rps6ka5

Name:

ribosomal protein S6 kinase A5

RGD ID:

1308336

Description:

Predicted to enable ATP binding activity and protein kinase activity. Predicted to be involved in several processes, including TORC1 signaling; interleukin-1-mediated signaling pathway; and regulation of DNA-templated transcription. Predicted to be located in nucleus. Predicted to be active in cytoplasm and nucleoplasm. Orthologous to human RPS6KA5 (ribosomal protein S6 kinase A5); PARTICIPATES IN p38 MAPK signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; mitogen activated protein kinase signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3,4-methylenedioxymethamphetamine; aristolochic acid A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC314384; mitogen and stress-activated protein kinase 1; Msk1; ribosomal protein S6 kinase alpha-5; ribosomal protein S6 kinase, 90kDa, polypeptide 5; ribosomal protein S6 kinase, polypeptide 5

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RPS6KA5 (ribosomal protein S6 kinase A5)	RGD	RGD
Mus musculus (house mouse):	Rps6ka5 (ribosomal protein S6 kinase, polypeptide 5)	RGD	RGD
Chinchilla lanigera (long-tailed chinchilla):	Rps6ka5 (ribosomal protein S6 kinase A5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RPS6KA5 (ribosomal protein S6 kinase A5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RPS6KA5 (ribosomal protein S6 kinase A5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rps6ka5 (ribosomal protein S6 kinase A5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RPS6KA5 (ribosomal protein S6 kinase A5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RPS6KA5 (ribosomal protein S6 kinase A5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rps6ka5 (ribosomal protein S6 kinase A5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	RPS6KA4 (ribosomal protein S6 kinase A4)	HGNC	OrthoDB
Alliance orthologs ³
Homo sapiens (human):	RPS6KA5 (ribosomal protein S6 kinase A5)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Rps6ka5 (ribosomal protein S6 kinase, polypeptide 5)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rps6ka5 (ribosomal protein S6 kinase, polypeptide 5)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	rskn-2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	JIL-1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	YPK3	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Saccharomyces cerevisiae (baker's yeast):	YPK3	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	rps6ka4	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	125,558,434 - 125,736,576 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	125,558,434 - 125,735,856 (-)	Ensembl				GRCr8
mRatBN7.2	6	119,828,823 - 120,006,190 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	119,828,846 - 120,006,224 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	119,991,862 - 120,163,014 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	120,288,522 - 120,459,682 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	119,623,372 - 119,794,534 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	124,557,892 - 124,735,787 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	124,557,913 - 124,735,778 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	133,782,163 - 133,959,351 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	124,820,623 - 124,999,790 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	117,356,574 - 117,533,013 (-)	NCBI		Celera
RGSC_v3.1	6	124,827,314 - 125,003,586 (-)	NCBI
Cytogenetic Map	6	q32	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Cocaine-Related Disorders (ISO)

COVID-19 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dimethylhydrazine (ISO)

1-chloro-2,4-dinitrobenzene (ISO)

17beta-estradiol (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

3,4-methylenedioxymethamphetamine (EXP,ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

all-trans-retinoic acid (ISO)

aristolochic acid A (EXP)

arsenite(3-) (ISO)

avermectin (ISO)

benzene (ISO)

benzo[a]pyrene (EXP,ISO)

beta-naphthoflavone (ISO)

bis(2-chloroethyl) sulfide (ISO)

bis(2-ethylhexyl) phthalate (EXP)

bisphenol A (EXP,ISO)

cadmium dichloride (ISO)

calcitriol (ISO)

cannabidiol (ISO)

chloroprene (EXP)

cocaine (EXP,ISO)

copper atom (ISO)

copper(0) (ISO)

cyclosporin A (ISO)

decabromodiphenyl ether (ISO)

deoxynivalenol (ISO)

Dibutyl phosphate (ISO)

diclofenac (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (EXP)

ethyl methanesulfonate (ISO)

fasudil (ISO)

fenvalerate (EXP)

folic acid (ISO)

formaldehyde (ISO)

FR900359 (ISO)

gallic acid (ISO)

gentamycin (EXP)

hexane (EXP)

hydralazine (ISO)

hydrogen peroxide (ISO)

ivermectin (ISO)

MeIQx (ISO)

metformin (ISO)

methoxychlor (EXP)

methyl methanesulfonate (ISO)

mifepristone (EXP)

ML-7 (ISO)

Moniliformin (ISO)

N-[2-(4-bromocinnamylamino)ethyl]isoquinoline-5-sulfonamide (EXP,ISO)

nickel sulfate (ISO)

niclosamide (ISO)

Nor-9-carboxy-delta9-THC (ISO)

obeticholic acid (ISO)

oxaliplatin (EXP)

oxidopamine (ISO)

ozone (ISO)

paracetamol (EXP)

paraquat (ISO)

phenylephrine (EXP)

pioglitazone (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

progesterone (ISO)

quercetin (ISO)

Ro 31-8220 (EXP)

SB 203580 (EXP,ISO)

SB 431542 (ISO)

SCH 23390 (ISO)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

SL-327 (ISO)

sodium arsenate (ISO)

sodium arsenite (EXP,ISO)

succimer (ISO)

sunitinib (ISO)

T-2 toxin (ISO)

temozolomide (ISO)

titanium dioxide (ISO)

topotecan (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

urethane (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Y-27632 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chromatin remodeling (IEA)

interleukin-1-mediated signaling pathway (IEA,ISO)

intracellular signal transduction (IEA,ISO)

negative regulation of DNA-templated transcription (IEA,ISO)

positive regulation of transcription by RNA polymerase II (IEA,ISO)

post-translational protein modification (IEA,ISO)

protein phosphorylation (ISO)

regulation of DNA-templated transcription (IBA,IEA,ISO)

regulation of postsynapse organization (IEA,ISO)

TORC1 signaling (IBA)

Cellular Component

cytoplasm (IBA,IEA,ISO)

nucleoplasm (IBA,IEA,ISO)

nucleus (IEA,ISO)

Molecular Function

ATP binding (IEA,ISO)

histone H2AS1 kinase activity (IEA,ISO)

histone H3S10 kinase activity (IEA,ISO)

histone H3S28 kinase activity (IEA,ISO)

kinase activity (IEA)

magnesium ion binding (IEA)

nucleotide binding (IEA)

protein binding (ISO)

protein kinase activity (IEA)

protein serine kinase activity (IEA)

protein serine/threonine kinase activity (IBA,IEA,ISO)

protein tyrosine kinase activity (IEA,ISO)

transferase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

mitogen activated protein kinase signaling pathway (IEA)

neurotrophic factor signaling pathway (IEA)

p38 MAPK signaling pathway (ISO)

the extracellular signal-regulated Raf/Mek/Erk signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	MAPKAP kinases - MKs - two's company, three's a crowd.	Gaestel M Nat Rev Mol Cell Biol. 2006 Feb;7(2):120-30.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
5.	GOA pipeline	RGD automated data pipeline
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:9687510	PMID:9873047	PMID:11994045	PMID:12628924	PMID:12763138	PMID:12773393	PMID:15010469	PMID:15893597	PMID:16531007	PMID:18385332	PMID:18511904	PMID:19197368
PMID:20018936	PMID:21493629	PMID:22004609	PMID:22082260	PMID:23065332	PMID:24142296	PMID:24349124	PMID:24352802	PMID:30744416	PMID:30919247

Genomics

Comparative Map Data

Rps6ka5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	125,558,434 - 125,736,576 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	125,558,434 - 125,735,856 (-)	Ensembl				GRCr8
mRatBN7.2	6	119,828,823 - 120,006,190 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	119,828,846 - 120,006,224 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	119,991,862 - 120,163,014 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	120,288,522 - 120,459,682 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	119,623,372 - 119,794,534 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	124,557,892 - 124,735,787 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	124,557,913 - 124,735,778 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	133,782,163 - 133,959,351 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	124,820,623 - 124,999,790 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	117,356,574 - 117,533,013 (-)	NCBI		Celera
RGSC_v3.1	6	124,827,314 - 125,003,586 (-)	NCBI
Cytogenetic Map	6	q32	NCBI

RPS6KA5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	90,847,861 - 91,060,641 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	90,847,861 - 91,060,682 (-)	Ensembl			hg38	GRCh38
GRCh37	14	91,314,205 - 91,526,985 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	90,406,912 - 90,596,746 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	14	90,430,073 - 90,596,746	NCBI
Celera	14	71,385,722 - 71,575,427 (-)	NCBI		Celera
Cytogenetic Map	14	q32.11	NCBI
HuRef	14	71,512,920 - 71,702,554 (-)	NCBI		HuRef
CHM1_1	14	91,274,932 - 91,464,763 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	14	85,073,446 - 85,286,084 (-)	NCBI		T2T-CHM13v2.0

Rps6ka5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	100,514,692 - 100,691,693 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	100,514,698 - 100,693,242 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	12	100,548,439 - 100,725,328 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	100,548,439 - 100,726,983 (-)	Ensembl			mm10	GRCm38
MGSCv37	12	101,787,988 - 101,963,238 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	12	100,950,828 - 101,126,078 (-)	NCBI		MGSCv36	mm8
Celera	12	101,770,330 - 101,946,292 (-)	NCBI		Celera
Cytogenetic Map	12	E	NCBI
cM Map	12	50.81	NCBI

Rps6ka5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955438	13,217,222 - 13,392,674 (-)	Ensembl
ChiLan1.0	NW_004955438	13,218,451 - 13,392,080 (-)	NCBI	ChiLan1.0	ChiLan1.0

RPS6KA5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	91,990,976 - 92,202,646 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	91,230,779 - 91,419,154 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	71,489,654 - 71,679,250 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	90,840,651 - 91,028,786 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	90,840,655 - 91,028,780 (-)	Ensembl			panPan2	panpan1.1

RPS6KA5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	61,801,185 - 61,962,846 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	61,802,812 - 61,973,259 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	61,381,750 - 61,551,905 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	62,076,158 - 62,246,525 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	62,052,775 - 62,246,681 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	61,756,580 - 61,926,684 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	61,805,735 - 61,976,310 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	62,135,192 - 62,305,546 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Rps6ka5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	13,936,110 - 14,130,251 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936488	17,940,327 - 18,132,970 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936488	17,937,421 - 18,132,845 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RPS6KA5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	112,561,988 - 112,753,564 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	112,561,985 - 112,753,666 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

RPS6KA5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	68,620,637 - 68,821,996 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	68,619,349 - 68,763,376 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666053	55,881,279 - 56,081,538 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rps6ka5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624734	11,499,637 - 11,659,536 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624734	11,499,372 - 11,660,564 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Rps6ka5
1197 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	514
Count of miRNA genes:	270
Interacting mature miRNAs:	348
Transcripts:	ENSRNOT00000064716
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331797	Bp213	Blood pressure QTL 213	3.291		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	6	114241077	147156653	Rat
4145118	Mcs26	Mammary carcinoma susceptibility QTL 26		0.0001	mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	6	112483610	147156653	Rat
2293088	Iddm28	Insulin dependent diabetes mellitus QTL 28	5.21		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	6	68767270	135411972	Rat
1331799	Bp211	Blood pressure QTL 211	3.66407		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	6	88019181	136741135	Rat
1581563	Uae33	Urinary albumin excretion QTL 33			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	93560258	136550638	Rat
10054138	Gmadr3	Adrenal mass QTL 3	3.68	0.00045	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	6	90871046	135871046	Rat
1641917	Colcr5	Colorectal carcinoma resistance QTL 5	3.18	0.0009	intestine integrity trait (VT:0010554)	benign colorectal tumor number (CMO:0001795)	6	98944780	143944780	Rat
71111	Iddm8	Insulin dependent diabetes mellitus QTL 8	1.9	0.002	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	6	110921244	147156653	Rat
61414	Pia3	Pristane induced arthritis QTL 3	4.5		joint integrity trait (VT:0010548)	post-insult time to onset of experimental arthritis (CMO:0001450)	6	100704576	136029228	Rat
724524	Uae2	Urinary albumin excretion QTL 2	2.7	0.0005	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	79198463	144254945	Rat
1358355	Srcrt4	Stress Responsive Cort QTL 4	6.39		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	106095977	147156653	Rat
2303624	Vencon5	Ventilatory control QTL 5	4.45		respiration trait (VT:0001943)	minute ventilation (CMO:0000132)	6	93778632	138778632	Rat
61329	Eae9	Experimental allergic encephalomyelitis QTL 9	3.7		body mass (VT:0001259)	change in body weight (CMO:0002045)	6	84490437	129490437	Rat
10054123	Srcrt6	Stress Responsive Cort QTL 6	2.5	0.0043	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	90871046	135871046	Rat
724536	Uae7	Urinary albumin excretion QTL 7	3.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	6	93560258	136550638	Rat
737976	Pia24	Pristane induced arthritis QTL 24			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	6	118366855	147156653	Rat
1298087	Iddm18	Insulin dependent diabetes mellitus QTL 18		0.0001	urine glucose amount (VT:0001758)	percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)	6	122236101	147156653	Rat
2313399	Anxrr28	Anxiety related response QTL 28			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	6	101593607	138161926	Rat
1581550	Pur8	Proteinuria QTL 8			urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	6	93560258	136550638	Rat
12801471	Schws9	Schwannoma susceptibility QTL 9			nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	6	101593607	146593607	Rat
2293085	Iddm29	Insulin dependent diabetes mellitus QTL 29	7.66		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	6	121444670	147156653	Rat

Markers in Region

BE108505

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	119,849,738 - 119,849,896 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	124,578,806 - 124,578,963	NCBI	Rnor6.0
Rnor_5.0	6	133,803,077 - 133,803,234	UniSTS	Rnor5.0
RGSC_v3.4	6	124,841,515 - 124,841,672	UniSTS	RGSC3.4
Celera	6	117,377,469 - 117,377,626	UniSTS
RH 3.4 Map	6	858.8	UniSTS
Cytogenetic Map	6	q32	UniSTS

RH138282

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	119,966,370 - 119,966,506 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	124,695,946 - 124,696,081	NCBI	Rnor6.0
Rnor_5.0	6	133,919,525 - 133,919,660	UniSTS	Rnor5.0
RGSC_v3.4	6	124,958,797 - 124,958,932	UniSTS	RGSC3.4
Celera	6	117,493,405 - 117,493,540	UniSTS
RH 3.4 Map	6	858.2	UniSTS
Cytogenetic Map	6	q32	UniSTS

AU049990

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	119,917,369 - 119,917,536 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	124,646,427 - 124,646,593	NCBI	Rnor6.0
Rnor_5.0	6	133,870,702 - 133,870,868	UniSTS	Rnor5.0
RGSC_v3.4	6	124,910,154 - 124,910,320	UniSTS	RGSC3.4
Celera	6	117,444,973 - 117,445,139	UniSTS
Cytogenetic Map	6	q32	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	13	67	179	91	90	59	99	59	6	381	209	22	155	89	97	31	21	21

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001395592	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240438	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594167	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594168	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594170	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594171	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112350	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112351	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473982	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000064716 ⟹ ENSRNOP00000063163

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	125,558,434 - 125,735,755 (-)	Ensembl
mRatBN7.2 Ensembl	6	119,828,846 - 120,006,144 (-)	Ensembl
Rnor_6.0 Ensembl	6	124,557,913 - 124,735,741 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000091693 ⟹ ENSRNOP00000072518

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	125,572,886 - 125,678,781 (-)	Ensembl
mRatBN7.2 Ensembl	6	119,843,277 - 119,949,175 (-)	Ensembl
Rnor_6.0 Ensembl	6	124,560,659 - 124,735,778 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000105060 ⟹ ENSRNOP00000091483

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	125,558,434 - 125,735,856 (-)	Ensembl
mRatBN7.2 Ensembl	6	119,828,846 - 120,006,224 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000107141 ⟹ ENSRNOP00000089479

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	125,558,434 - 125,678,781 (-)	Ensembl
mRatBN7.2 Ensembl	6	119,828,846 - 119,949,175 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000152318 ⟹ ENSRNOP00000100212

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	125,558,434 - 125,735,755 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000163303 ⟹ ENSRNOP00000102579

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	125,568,018 - 125,735,755 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000170293 ⟹ ENSRNOP00000101420

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	125,558,434 - 125,714,943 (-)	Ensembl

RefSeq Acc Id:

NM_001395592 ⟹ NP_001382521

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	125,558,434 - 125,735,755 (-)	NCBI
mRatBN7.2	6	119,828,825 - 120,006,151 (-)	NCBI

RefSeq Acc Id:

XM_006240438 ⟹ XP_006240500

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	125,558,451 - 125,736,576 (-)	NCBI
mRatBN7.2	6	119,828,823 - 120,006,186 (-)	NCBI
Rnor_6.0	6	124,557,892 - 124,735,787 (-)	NCBI
Rnor_5.0	6	133,782,163 - 133,959,351 (-)	NCBI

Sequence:

show sequence

TGCGCCGTACTAGCGGTGCCCGCTGAGGGGAGGAGGCGGAGGAGCTCCGCGGCCAGAGCGGGAA
AGAGACTCGCCTCAGTGTCGGAGTTGTGGCGCTGCGGCAGCTTGGCTCCTGGAGCTGTGAAGAG
ACAGGGCGTCTGCTGTCCCATCAGGTTCCCATCAGAGCGACCCGCGCGGTCGGAAAGAGGGTGA
AGATGGAGGGGGAGGGCGGCGGCAGCGGCGGCGCGGGCACCAGCGGGGACAGTGGCGACGGCGG
CGAGCAGCTCCTTACTGTCAAGCATGAGCTGCGGACCGCTTATGGGAAAGTATTTCTAGTTCGT
AAAATAAGCGGCCATGATGCTGGAAAGCTGTATGCCATGAAAGTTTTAAAAAAAGCAACAATCG
TTCAGAAGGCTAAAACTACGGAGCATACGAGGACAGAACGGCAGGTTCTGGAGCACATTAGACA
GTCGCCATTTCTGGTGACGTTGCACTATGCTTTCCAGACAGAGACCAAGCTTCATCTCATCTTA
GATTATATAAATGGTGGAGAACTTTTTACTCATCTTTCTCAAAGAGAGCGTTTCACAGAGCACG
AAGTGCAGATCTATGTTGGAGAGATCGTGCTTGCCCTGGAACACCTGCACAAGTTGGGGATTAT
ATACCGTGACATTAAGCTGGAAAATATTCTACTTGATTCTAATGGCCATGTGGTGCTGACAGAT
TTTGGTCTGAGTAAGGAGTTTGTGGCTGATGAAGCCGAAAGAGCGTATTCTTTCTGTGGGACTA
TTGAGTACATGGCGCCAGATATTGTCAGAGGGGGCGATTCCGGACATGACAAGGCAGTTGACTG
GTGGAGTTTAGGTGTTCTAATGTATGAGCTACTAACTGGAGCATCTCCTTTCACTGTTGATGGA
GAAAAAAATTCCCAGGCTGAGATATCTAGGAGAATCTTAAAGAGTGAGCCTCCGTATCCCCAGG
GAATGAGCTCAGTAGCTAAAGACCTCCTTCAGCGTCTTTTGATGAAAGATCCCAAGAAGCGATT
GGGATGTGGCCCACGGGATGCAGAAGAAATCAAAGAACATCTCTTCTTTGAGAAGATAAATTGG
GATGACTTAGCTGCCAAAAAAGTGCCTGCGCCCTTTAAACCAGTGATCCGGGACGAGTTAGACG
TGAGTAACTTTGCTGAAGAGTTCACTGAGATGGACCCCACCTACTCTCCTGCAGCTCTGCCCCA
GAGCTCTGAGCGACTGTTCCAGGGCTACTCCTTCGTTGCTCCTTCCATCCTCTTCAAGCGTAAC
GCGGCGGTCATAGATCCCCTTCAGTTCCATATGGGAGTAGACCGCCCTGGAGTGACAAACGTTG
CCAGGAGCGCAATGATGAAGGACTCACCATTCTACCAACACTATGACCTAGATCTGAAGGACAA
ACCTTTGGGAGAAGGAAGTTTTTCAATCTGTCGGAAGTGTGTACACAAAAAAACTAACCAAGCC
TTTGCCGTCAAAATAATCAGCAAAAGGATGGAAGCCAATACTCAGAAAGAAATAACAGCTCTGA
AACTCTGCGAAGGCCACCCCAATGTTGTGAAGCTGCATGAAGTTTTTCATGACCAGCTTCATAC
ATTTCTTGTGATGGAGCTTCTGAATGGGGGAGAGCTGTTTGAGCGCATCAAGAAAAAGAAGCAC
TTCAGCGAGACTGAGGCCAGCTACATTATGCGGAAGCTTGTGTCGGCTGTGAGCCACATGCACG
ATGTTGGAGTGGTGCACAGAGACCTGAAGCCGGAGAATTTATTGTTCACTGATGAAAACGACAA
TTTGGAGATTAAAGTGATTGACTTTGGGTTTGCACGCCTCAAGCCGCCTGACAATCAGCCCCTC
AAGACCCCATGCTTCACGCTTCACTACGCAGCACCGGAGCTCTTGACGCACAATGGCTACGATG
AGTCCTGCGACCTGTGGAGCTTGGGTGTCATCCTGTATACAATGCTGTCAGGGCAGGTACCGTT
CCAGTCCCATGACAGAAGTTTAACATGTACCAGTGCAGTGGAAATCATGAAGAAAATTAAAAAG
GGAGATTTCTCCTTTGAAGGGGAAGCATGGAAAAATGTATCCCAAGAGGCTAAAGACTTGATTC
AAGGACTTCTTACAGTTGATCCAAATAAAAGGCTGAAAATGTCTGGCTTGAGGTACAATGAATG
GCTTCAGGATGGCAGTCAGCTGTCCTCCAATCCTCTGATGACTCCAGACATTCTGGGATCTTCA
GGAGCAGCTGTACACACCTGTGTGAAAGCAACCTTCCATGCCTTTAACAAATATAAGAGAGAAG
GGTTCTGCCTTCAGAATGTCGATAAGGCCCCTTTGGCTAAGAGGAGGAAAATGAAGAGGACCAG
CACCAGCACAGAGACTCGCAGCAGCTCCAGTGAGAGCTCCCGCTCCTCCTCCTCCCATTCCCAT
GGCAAGACAACGCCTACCAAGACACTGCAGCCAAGCAACCCCACCGAAGGCAGCAACCCAGACA
CCCTCTTCCAGTTCTCAGACTGAGTGCTGCAGGAATGGTAGGCTGTCCTCGCTGACCCTTGCAC
CTCAGCTCCCTCAGCATGTGCCTGAGGTATGTTCTGTGCTTTAAAAGATGTGTCCCATTGTTCT
CATTGGACTCTGCCTCGTAATGAATATTTCTTGGGGAACTCTACTTGGTTATCCTTGTCCAAAA
GCACTGGACAGACAGCATTACTGTGAATAGAGGACACGTGATAGATACTTTTTAGCAGACTAAC
ATGATGCCAGCTCAAGATTCTTCTTGAAACAGCAAAGGTTTCTGTAACTTTGGTGACTAGTTAG
ATAAGTCACAGATTTTCACATGTCTGCCAAGAAGACTTGAAAATTTCGCCATGCCTGGTGGACA
AGGAAGGTTTTTAAGAGACTTGCACCTTTTGGGTAGTGATTTACTAGAGAAAAAGGTCTGTTTT
CCAAAAAGATATAATGAATTTTATGTGTGACTTGTTTCTTAAAAGAGAATTTAACTTATTGTTT
TTATTTTATGGTCATATATGCTGATAACCTGCTATTATTAATCTTTTTCTAAAAAGTAAAAAAA
AAAATATTTAAGAATTTAGGGTCCTATGCTTTGCACCTGGGGCCCATCTGAGACGCATGCTAAG
CTATGTTTGTTTTTAATTTTGCACTGCTCTTTCCTGACAGTTTGTTTTAATGGTTATTGTGGGA
GTTAAGGTACATGTCTCTTGGTTTTATGTAACATGGCACTTTATGAAATAGTGTGAGTATTGCA
GTCTGTCTTAGAAGGTGCACTGTTCCAAGCATCTGTGCTGATTTACCATTCGTACTCTACCTTC
TTTCATCTGTCCCCACCTCTCTCTTCTGCTTTCTGTGCAGCAAGTAGAAAGGGACATGTTGTCT
CATGAGTCATTAGCCACTTATGCACCAATCTGAGGAAAAGTAAAGGGAATTGTACTCAACACTG
TGCTCCACATCTGTACACTGTGTCGCACTACAGCGAGCCGCCCCCTCCTGTAGGCAGAGACTAT
GTACATAGTATTTTAGAACCACAGCCATGCTTGACCCACACCGCATTTTATAAACTTATGCAGA
GCACTTTTATTGCTCCAAAGTTCTGAATTCATACAGACAAGCACTATGCCATGAAGATATTTCA
CTGAAAGACTGCTGCATTTTAAAGTACAAACTAGTTAATTCCCTATGCAAAAAAGAAATCATGG
ATTTGTATGTGTTTTTCTTTAAAGCCATTACATGGAATGTCAGGACTGAGAAAAGGGTCTTCAC
TATGTCTACAAGAACTGCGTTTAAAAGGGTACCTCCCGACATGTTGATCTTACAGTTTTGTTAA
TGATAACCTCCTTAGCATTAGTTTGGGATTTGGACACGATACCTATTTATCTCTTTCTTAAGGT
AATAGCAGCATTAATGTCAACCAGTGATGAATACTGAAGGTAACTGCATTCTGTGTAATGGTAA
TATATTTATTACTAAGTCAATGTATATATTAATAATAGTATAGGAAACAAAATGGCAAATATTA
AAATATTTTCAAAATAATATATTATCCTGCTCACTTTTTGTTCACAGTAGTTACTGGGGATATT
TTTTGATATTCTGACTGGCCAAATGAGTATATGATTCTAATTGAGTCAATAAAAATTTTATACT
CCTAGCTTTCAGTCATTTCTAGTAATGATAGGAAACTGTGTGAATTACTAATAAACTCTAGCTA
TTTCACAAAAATGTGATGCCCTTGGGCAGAGGTTTTTAATAAGAATATGTCCACTCATTTTTAC
ACTGGGTTATATTTGGAAATGTTTAAGTTAGTTTTTGAAGTTATTTGTAAATGTCTGTCCTGTA
GGAAATATGAGTTACACAGTACAAACTAAGGAGACTGTTGCCAAAAGAAAGTAATCCAGAAAAG
GGGTTCAGTGCCCTCATGATTGATTAGTGCATTGTAGATATTGGAATTGATGGGTTCTAAATTT
CTTCACCTGGTATCTTCTGGAAGAATCAATAGTCACTAGAACGGGCAAAAGACAGGTAGAGTAA
GAAGAAAGCCTAACTGAATCTTCTACCGGGAGCTTGTGAAAGGCCTCAGGAAACTTAAGATGCT
GTCAGTAACACCCAATTTATAAGTGCTTGAAAGGCAGTACGTAATGATTCCTTGCAGGTTGTGT
TAGGAAAGTTCTTTTAGAAATCACATTTAGTCACATCAAAACTAAACGATAAAAATGCTACGTA
CAAAAGCACTGAGAGGGGCTGGAGAAATAGGAGCAGTTAAGAACAGACACTGTTCTTGGCCAAA
GGATAGGAGTTCCATTCCCAGCATGCATGGCTCACAGCTCACAGCAAGCCTGGAACTCCAGCTC
CAGAGCATCCCATGCTGTCTTCTGGTGCACAGAAATGTTAAGTGAGATGACTTTTGATTTTAGG
AGTAAAATAGAAGTAGATCAAAGAAACATAAATAATCTGCTTTAAGTTCCCTCTATGACAATGG
TTCTGGCTGTCAAGTCAAATTATCCTACCCTTCTTTATGGATTACATTGTATGTAATTTATCCC
ACTGTATATCGGGAGTCACACATTGTATAATTGTGTCTGTCTAATATATCGAAAGGCAAAGATA
TGCTAGGAGAACAAAACTAAAGCAGAGGGGTTTCCTGTAATTACGATGCCAGATCCTGTTGCTG
AATGAACTAATTTAGCTCTCTTGAAGTCCATCAGTTATCCCAAACCTCTATAAAAACCATTTAA
CTATTGGAATGAAGTGAATTTCAACATGATTATCTGTCTTGAGGTTGCGGGCTCATTTGTGCAT
GAAAACTGCTTTTTTTCTTTTGAGATTACTGCTAATTAAGTATGCAAATGGCTTTGTTTTAAAT
GTAAGGTGGTTATTTTGAAGAGTTCTACTAGGGTAACAATGAGTGATTTGTTTGTTCATTTGTT
TTTTAATAAAGAAAATTCTTTATCTAAATATGAACTCAAATATTA

hide sequence

RefSeq Acc Id:

XM_017594169 ⟹ XP_017449658

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	125,558,451 - 125,735,586 (-)	NCBI
mRatBN7.2	6	119,828,823 - 119,951,182 (-)	NCBI
Rnor_6.0	6	124,557,892 - 124,680,278 (-)	NCBI

Sequence:

show sequence

TTAGTTGTTGTTCTGTTGCTGTGAAGAGACACCGTGACCAAGGCAACACTTATCAAAGAAAGCA
TTTAATTGGGGTCTTGCCTACAACTTTATATGCCAACTTAACAGGACATGCAGAGAAGGTGGGA
ATTGAAAATTTTGAGCTGCTGAAGGTCCTAGGAACTGGAGCTTATGGGAAAGTATTTCTAGTTC
GTAAAATAAGCGGCCATGATGCTGGAAAGCTGTATGCCATGAAAGTTTTAAAAAAAGCAACAAT
CGTTCAGAAGGCTAAAACTACGGAGCATACGAGGACAGAACGGCAGGTTCTGGAGCACATTAGA
CAGTCGCCATTTCTGGTGACGTTGCACTATGCTTTCCAGACAGAGACCAAGCTTCATCTCATCT
TAGATTATATAAATGGTGGAGAACTTTTTACTCATCTTTCTCAAAGAGAGCGTTTCACAGAGCA
CGAAGTGCAGATCTATGTTGGAGAGATCGTGCTTGCCCTGGAACACCTGCACAAGTTGGGGATT
ATATACCGTGACATTAAGCTGGAAAATATTCTACTTGATTCTAATGGCCATGTGGTGCTGACAG
ATTTTGGTCTGAGTAAGGAGTTTGTGGCTGATGAAGCCGAAAGAGCGTATTCTTTCTGTGGGAC
TATTGAGTACATGGCGCCAGATATTGTCAGAGGGGGCGATTCCGGACATGACAAGGCAGTTGAC
TGGTGGAGTTTAGGTGTTCTAATGTATGAGCTACTAACTGGAGCATCTCCTTTCACTGTTGATG
GAGAAAAAAATTCCCAGGCTGAGATATCTAGGAGAATCTTAAAGAGTGAGCCTCCGTATCCCCA
GGGAATGAGCTCAGTAGCTAAAGACCTCCTTCAGCGTCTTTTGATGAAAGATCCCAAGAAGCGA
TTGGGATGTGGCCCACGGGATGCAGAAGAAATCAAAGAACATCTCTTCTTTGAGAAGATAAATT
GGGATGACTTAGCTGCCAAAAAAGTGCCTGCGCCCTTTAAACCAGTGATCCGGGACGAGTTAGA
CGTGAGTAACTTTGCTGAAGAGTTCACTGAGATGGACCCCACCTACTCTCCTGCAGCTCTGCCC
CAGAGCTCTGAGCGACTGTTCCAGGGCTACTCCTTCGTTGCTCCTTCCATCCTCTTCAAGCGTA
ACGCGGCGGTCATAGATCCCCTTCAGTTCCATATGGGAGTAGACCGCCCTGGAGTGACAAACGT
TGCCAGGAGCGCAATGATGAAGGACTCACCATTCTACCAACACTATGACCTAGATCTGAAGGAC
AAACCTTTGGGAGAAGGAAGTTTTTCAATCTGTCGGAAGTGTGTACACAAAAAAACTAACCAAG
CCTTTGCCGTCAAAATAATCAGCAAAAGGATGGAAGCCAATACTCAGAAAGAAATAACAGCTCT
GAAACTCTGCGAAGGCCACCCCAATGTTGTGAAGCTGCATGAAGTTTTTCATGACCAGCTTCAT
ACATTTCTTGTGATGGAGCTTCTGAATGGGGGAGAGCTGTTTGAGCGCATCAAGAAAAAGAAGC
ACTTCAGCGAGACTGAGGCCAGCTACATTATGCGGAAGCTTGTGTCGGCTGTGAGCCACATGCA
CGATGTTGGAGTGGTGCACAGAGACCTGAAGCCGGAGAATTTATTGTTCACTGATGAAAACGAC
AATTTGGAGATTAAAGTGATTGACTTTGGGTTTGCACGCCTCAAGCCGCCTGACAATCAGCCCC
TCAAGACCCCATGCTTCACGCTTCACTACGCAGCACCGGAGCTCTTGACGCACAATGGCTACGA
TGAGTCCTGCGACCTGTGGAGCTTGGGTGTCATCCTGTATACAATGCTGTCAGGGCAGGTACCG
TTCCAGTCCCATGACAGAAGTTTAACATGTACCAGTGCAGTGGAAATCATGAAGAAAATTAAAA
AGGGAGATTTCTCCTTTGAAGGGGAAGCATGGAAAAATGTATCCCAAGAGGCTAAAGACTTGAT
TCAAGGACTTCTTACAGTTGATCCAAATAAAAGGCTGAAAATGTCTGGCTTGAGGTACAATGAA
TGGCTTCAGGATGGCAGTCAGCTGTCCTCCAATCCTCTGATGACTCCAGACATTCTGGGATCTT
CAGGAGCAGCTGTACACACCTGTGTGAAAGCAACCTTCCATGCCTTTAACAAATATAAGAGAGA
AGGGTTCTGCCTTCAGAATGTCGATAAGGCCCCTTTGGCTAAGAGGAGGAAAATGAAGAGGACC
AGCACCAGCACAGAGACTCGCAGCAGCTCCAGTGAGAGCTCCCGCTCCTCCTCCTCCCATTCCC
ATGGCAAGACAACGCCTACCAAGACACTGCAGCCAAGCAACCCCACCGAAGGCAGCAACCCAGA
CACCCTCTTCCAGTTCTCAGACTGAGTGCTGCAGGAATGGTAGGCTGTCCTCGCTGACCCTTGC
ACCTCAGCTCCCTCAGCATGTGCCTGAGGTATGTTCTGTGCTTTAAAAGATGTGTCCCATTGTT
CTCATTGGACTCTGCCTCGTAATGAATATTTCTTGGGGAACTCTACTTGGTTATCCTTGTCCAA
AAGCACTGGACAGACAGCATTACTGTGAATAGAGGACACGTGATAGATACTTTTTAGCAGACTA
ACATGATGCCAGCTCAAGATTCTTCTTGAAACAGCAAAGGTTTCTGTAACTTTGGTGACTAGTT
AGATAAGTCACAGATTTTCACATGTCTGCCAAGAAGACTTGAAAATTTCGCCATGCCTGGTGGA
CAAGGAAGGTTTTTAAGAGACTTGCACCTTTTGGGTAGTGATTTACTAGAGAAAAAGGTCTGTT
TTCCAAAAAGATATAATGAATTTTATGTGTGACTTGTTTCTTAAAAGAGAATTTAACTTATTGT
TTTTATTTTATGGTCATATATGCTGATAACCTGCTATTATTAATCTTTTTCTAAAAAGTAAAAA
AAAAAATATTTAAGAATTTAGGGTCCTATGCTTTGCACCTGGGGCCCATCTGAGACGCATGCTA
AGCTATGTTTGTTTTTAATTTTGCACTGCTCTTTCCTGACAGTTTGTTTTAATGGTTATTGTGG
GAGTTAAGGTACATGTCTCTTGGTTTTATGTAACATGGCACTTTATGAAATAGTGTGAGTATTG
CAGTCTGTCTTAGAAGGTGCACTGTTCCAAGCATCTGTGCTGATTTACCATTCGTACTCTACCT
TCTTTCATCTGTCCCCACCTCTCTCTTCTGCTTTCTGTGCAGCAAGTAGAAAGGGACATGTTGT
CTCATGAGTCATTAGCCACTTATGCACCAATCTGAGGAAAAGTAAAGGGAATTGTACTCAACAC
TGTGCTCCACATCTGTACACTGTGTCGCACTACAGCGAGCCGCCCCCTCCTGTAGGCAGAGACT
ATGTACATAGTATTTTAGAACCACAGCCATGCTTGACCCACACCGCATTTTATAAACTTATGCA
GAGCACTTTTATTGCTCCAAAGTTCTGAATTCATACAGACAAGCACTATGCCATGAAGATATTT
CACTGAAAGACTGCTGCATTTTAAAGTACAAACTAGTTAATTCCCTATGCAAAAAAGAAATCAT
GGATTTGTATGTGTTTTTCTTTAAAGCCATTACATGGAATGTCAGGACTGAGAAAAGGGTCTTC
ACTATGTCTACAAGAACTGCGTTTAAAAGGGTACCTCCCGACATGTTGATCTTACAGTTTTGTT
AATGATAACCTCCTTAGCATTAGTTTGGGATTTGGACACGATACCTATTTATCTCTTTCTTAAG
GTAATAGCAGCATTAATGTCAACCAGTGATGAATACTGAAGGTAACTGCATTCTGTGTAATGGT
AATATATTTATTACTAAGTCAATGTATATATTAATAATAGTATAGGAAACAAAATGGCAAATAT
TAAAATATTTTCAAAATAATATATTATCCTGCTCACTTTTTGTTCACAGTAGTTACTGGGGATA
TTTTTTGATATTCTGACTGGCCAAATGAGTATATGATTCTAATTGAGTCAATAAAAATTTTATA
CTCCTAGCTTTCAGTCATTTCTAGTAATGATAGGAAACTGTGTGAATTACTAATAAACTCTAGC
TATTTCACAAAAATGTGATGCCCTTGGGCAGAGGTTTTTAATAAGAATATGTCCACTCATTTTT
ACACTGGGTTATATTTGGAAATGTTTAAGTTAGTTTTTGAAGTTATTTGTAAATGTCTGTCCTG
TAGGAAATATGAGTTACACAGTACAAACTAAGGAGACTGTTGCCAAAAGAAAGTAATCCAGAAA
AGGGGTTCAGTGCCCTCATGATTGATTAGTGCATTGTAGATATTGGAATTGATGGGTTCTAAAT
TTCTTCACCTGGTATCTTCTGGAAGAATCAATAGTCACTAGAACGGGCAAAAGACAGGTAGAGT
AAGAAGAAAGCCTAACTGAATCTTCTACCGGGAGCTTGTGAAAGGCCTCAGGAAACTTAAGATG
CTGTCAGTAACACCCAATTTATAAGTGCTTGAAAGGCAGTACGTAATGATTCCTTGCAGGTTGT
GTTAGGAAAGTTCTTTTAGAAATCACATTTAGTCACATCAAAACTAAACGATAAAAATGCTACG
TACAAAAGCACTGAGAGGGGCTGGAGAAATAGGAGCAGTTAAGAACAGACACTGTTCTTGGCCA
AAGGATAGGAGTTCCATTCCCAGCATGCATGGCTCACAGCTCACAGCAAGCCTGGAACTCCAGC
TCCAGAGCATCCCATGCTGTCTTCTGGTGCACAGAAATGTTAAGTGAGATGACTTTTGATTTTA
GGAGTAAAATAGAAGTAGATCAAAGAAACATAAATAATCTGCTTTAAGTTCCCTCTATGACAAT
GGTTCTGGCTGTCAAGTCAAATTATCCTACCCTTCTTTATGGATTACATTGTATGTAATTTATC
CCACTGTATATCGGGAGTCACACATTGTATAATTGTGTCTGTCTAATATATCGAAAGGCAAAGA
TATGCTAGGAGAACAAAACTAAAGCAGAGGGGTTTCCTGTAATTACGATGCCAGATCCTGTTGC
TGAATGAACTAATTTAGCTCTCTTGAAGTCCATCAGTTATCCCAAACCTCTATAAAAACCATTT
AACTATTGGAATGAAGTGAATTTCAACATGATTATCTGTCTTGAGGTTGCGGGCTCATTTGTGC
ATGAAAACTGCTTTTTTTCTTTTGAGATTACTGCTAATTAAGTATGCAAATGGCTTTGTTTTAA
ATGTAAGGTGGTTATTTTGAAGAGTTCTACTAGGGTAACAATGAGTGATTTGTTTGTTCATTTG
TTTTTTAATAAAGAAAATTCTTTATCTAAATATGAACTCAAATATTA

hide sequence

RefSeq Acc Id:

XM_017594171 ⟹ XP_017449660

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	125,558,451 - 125,596,888 (-)	NCBI
mRatBN7.2	6	119,828,823 - 119,867,313 (-)	NCBI
Rnor_6.0	6	124,557,892 - 124,596,530 (-)	NCBI

Sequence:

show sequence

AATGCCATAAAAATAATCTCCTGTAGGTTTCCAGAGCATTACTCCTTCTGTTCATTCCTAGCAA
GTATCACAGTTGCAGTGTTATGCTTTTGTTCTGTTTTACTTGAGTTTTCTAACATTGAGAACAG
TTTTGACAGAAGTAAAGGTTGAGTCCACTTCGATGAACATGAAGTAACAGGGATCAGTTTGCCT
TCTTGCCTGAAACAGTTTTAACAATGGAAAAAAATATGTGAAACAGCAGTTGTGAGGACATTGG
ACATCTGACAATGGAGGGCAGAGGTTTCAAAGATACAGAGAATAAACAAGAGATGAAGAGGACC
TACACTAGCCAGATTGTCTTTGAAGAAGGATGGAGTTGATTTTAAGACTTATCCTAAGCTGTAA
CGATTATGCAGTTCGGTTCTGGTATCAGGACAAACAGATGAATACTGGAAACGATTTGTGTGCC
TGCAGTCCCAGTCCATGGAAGGAGAATCTTAAAGAGTGAGCCTCCGTATCCCCAGGGAATGAGC
TCAGTAGCTAAAGACCTCCTTCAGCGTCTTTTGATGAAAGATCCCAAGAAGCGATTGGGATGTG
GCCCACGGGATGCAGAAGAAATCAAAGAACATCTCTTCTTTGAGAAGATAAATTGGGATGACTT
AGCTGCCAAAAAAGTGCCTGCGCCCTTTAAACCAGTGATCCGGGACGAGTTAGACGTGAGTAAC
TTTGCTGAAGAGTTCACTGAGATGGACCCCACCTACTCTCCTGCAGCTCTGCCCCAGAGCTCTG
AGCGACTGTTCCAGGGCTACTCCTTCGTTGCTCCTTCCATCCTCTTCAAGCGTAACGCGGCGGT
CATAGATCCCCTTCAGTTCCATATGGGAGTAGACCGCCCTGGAGTGACAAACGTTGCCAGGAGC
GCAATGATGAAGGACTCACCATTCTACCAACACTATGACCTAGATCTGAAGGACAAACCTTTGG
GAGAAGGAAGTTTTTCAATCTGTCGGAAGTGTGTACACAAAAAAACTAACCAAGCCTTTGCCGT
CAAAATAATCAGCAAAAGGATGGAAGCCAATACTCAGAAAGAAATAACAGCTCTGAAACTCTGC
GAAGGCCACCCCAATGTTGTGAAGCTGCATGAAGTTTTTCATGACCAGCTTCATACATTTCTTG
TGATGGAGCTTCTGAATGGGGGAGAGCTGTTTGAGCGCATCAAGAAAAAGAAGCACTTCAGCGA
GACTGAGGCCAGCTACATTATGCGGAAGCTTGTGTCGGCTGTGAGCCACATGCACGATGTTGGA
GTGGTGCACAGAGACCTGAAGCCGGAGAATTTATTGTTCACTGATGAAAACGACAATTTGGAGA
TTAAAGTGATTGACTTTGGGTTTGCACGCCTCAAGCCGCCTGACAATCAGCCCCTCAAGACCCC
ATGCTTCACGCTTCACTACGCAGCACCGGAGCTCTTGACGCACAATGGCTACGATGAGTCCTGC
GACCTGTGGAGCTTGGGTGTCATCCTGTATACAATGCTGTCAGGGCAGGTACCGTTCCAGTCCC
ATGACAGAAGTTTAACATGTACCAGTGCAGTGGAAATCATGAAGAAAATTAAAAAGGGAGATTT
CTCCTTTGAAGGGGAAGCATGGAAAAATGTATCCCAAGAGGCTAAAGACTTGATTCAAGGACTT
CTTACAGTTGATCCAAATAAAAGGCTGAAAATGTCTGGCTTGAGGTACAATGAATGGCTTCAGG
ATGGCAGTCAGCTGTCCTCCAATCCTCTGATGACTCCAGACATTCTGGGATCTTCAGGAGCAGC
TGTACACACCTGTGTGAAAGCAACCTTCCATGCCTTTAACAAATATAAGAGAGAAGGGTTCTGC
CTTCAGAATGTCGATAAGGCCCCTTTGGCTAAGAGGAGGAAAATGAAGAGGACCAGCACCAGCA
CAGAGACTCGCAGCAGCTCCAGTGAGAGCTCCCGCTCCTCCTCCTCCCATTCCCATGGCAAGAC
AACGCCTACCAAGACACTGCAGCCAAGCAACCCCACCGAAGGCAGCAACCCAGACACCCTCTTC
CAGTTCTCAGACTGAGTGCTGCAGGAATGGTAGGCTGTCCTCGCTGACCCTTGCACCTCAGCTC
CCTCAGCATGTGCCTGAGGTATGTTCTGTGCTTTAAAAGATGTGTCCCATTGTTCTCATTGGAC
TCTGCCTCGTAATGAATATTTCTTGGGGAACTCTACTTGGTTATCCTTGTCCAAAAGCACTGGA
CAGACAGCATTACTGTGAATAGAGGACACGTGATAGATACTTTTTAGCAGACTAACATGATGCC
AGCTCAAGATTCTTCTTGAAACAGCAAAGGTTTCTGTAACTTTGGTGACTAGTTAGATAAGTCA
CAGATTTTCACATGTCTGCCAAGAAGACTTGAAAATTTCGCCATGCCTGGTGGACAAGGAAGGT
TTTTAAGAGACTTGCACCTTTTGGGTAGTGATTTACTAGAGAAAAAGGTCTGTTTTCCAAAAAG
ATATAATGAATTTTATGTGTGACTTGTTTCTTAAAAGAGAATTTAACTTATTGTTTTTATTTTA
TGGTCATATATGCTGATAACCTGCTATTATTAATCTTTTTCTAAAAAGTAAAAAAAAAAATATT
TAAGAATTTAGGGTCCTATGCTTTGCACCTGGGGCCCATCTGAGACGCATGCTAAGCTATGTTT
GTTTTTAATTTTGCACTGCTCTTTCCTGACAGTTTGTTTTAATGGTTATTGTGGGAGTTAAGGT
ACATGTCTCTTGGTTTTATGTAACATGGCACTTTATGAAATAGTGTGAGTATTGCAGTCTGTCT
TAGAAGGTGCACTGTTCCAAGCATCTGTGCTGATTTACCATTCGTACTCTACCTTCTTTCATCT
GTCCCCACCTCTCTCTTCTGCTTTCTGTGCAGCAAGTAGAAAGGGACATGTTGTCTCATGAGTC
ATTAGCCACTTATGCACCAATCTGAGGAAAAGTAAAGGGAATTGTACTCAACACTGTGCTCCAC
ATCTGTACACTGTGTCGCACTACAGCGAGCCGCCCCCTCCTGTAGGCAGAGACTATGTACATAG
TATTTTAGAACCACAGCCATGCTTGACCCACACCGCATTTTATAAACTTATGCAGAGCACTTTT
ATTGCTCCAAAGTTCTGAATTCATACAGACAAGCACTATGCCATGAAGATATTTCACTGAAAGA
CTGCTGCATTTTAAAGTACAAACTAGTTAATTCCCTATGCAAAAAAGAAATCATGGATTTGTAT
GTGTTTTTCTTTAAAGCCATTACATGGAATGTCAGGACTGAGAAAAGGGTCTTCACTATGTCTA
CAAGAACTGCGTTTAAAAGGGTACCTCCCGACATGTTGATCTTACAGTTTTGTTAATGATAACC
TCCTTAGCATTAGTTTGGGATTTGGACACGATACCTATTTATCTCTTTCTTAAGGTAATAGCAG
CATTAATGTCAACCAGTGATGAATACTGAAGGTAACTGCATTCTGTGTAATGGTAATATATTTA
TTACTAAGTCAATGTATATATTAATAATAGTATAGGAAACAAAATGGCAAATATTAAAATATTT
TCAAAATAATATATTATCCTGCTCACTTTTTGTTCACAGTAGTTACTGGGGATATTTTTTGATA
TTCTGACTGGCCAAATGAGTATATGATTCTAATTGAGTCAATAAAAATTTTATACTCCTAGCTT
TCAGTCATTTCTAGTAATGATAGGAAACTGTGTGAATTACTAATAAACTCTAGCTATTTCACAA
AAATGTGATGCCCTTGGGCAGAGGTTTTTAATAAGAATATGTCCACTCATTTTTACACTGGGTT
ATATTTGGAAATGTTTAAGTTAGTTTTTGAAGTTATTTGTAAATGTCTGTCCTGTAGGAAATAT
GAGTTACACAGTACAAACTAAGGAGACTGTTGCCAAAAGAAAGTAATCCAGAAAAGGGGTTCAG
TGCCCTCATGATTGATTAGTGCATTGTAGATATTGGAATTGATGGGTTCTAAATTTCTTCACCT
GGTATCTTCTGGAAGAATCAATAGTCACTAGAACGGGCAAAAGACAGGTAGAGTAAGAAGAAAG
CCTAACTGAATCTTCTACCGGGAGCTTGTGAAAGGCCTCAGGAAACTTAAGATGCTGTCAGTAA
CACCCAATTTATAAGTGCTTGAAAGGCAGTACGTAATGATTCCTTGCAGGTTGTGTTAGGAAAG
TTCTTTTAGAAATCACATTTAGTCACATCAAAACTAAACGATAAAAATGCTACGTACAAAAGCA
CTGAGAGGGGCTGGAGAAATAGGAGCAGTTAAGAACAGACACTGTTCTTGGCCAAAGGATAGGA
GTTCCATTCCCAGCATGCATGGCTCACAGCTCACAGCAAGCCTGGAACTCCAGCTCCAGAGCAT
CCCATGCTGTCTTCTGGTGCACAGAAATGTTAAGTGAGATGACTTTTGATTTTAGGAGTAAAAT
AGAAGTAGATCAAAGAAACATAAATAATCTGCTTTAAGTTCCCTCTATGACAATGGTTCTGGCT
GTCAAGTCAAATTATCCTACCCTTCTTTATGGATTACATTGTATGTAATTTATCCCACTGTATA
TCGGGAGTCACACATTGTATAATTGTGTCTGTCTAATATATCGAAAGGCAAAGATATGCTAGGA
GAACAAAACTAAAGCAGAGGGGTTTCCTGTAATTACGATGCCAGATCCTGTTGCTGAATGAACT
AATTTAGCTCTCTTGAAGTCCATCAGTTATCCCAAACCTCTATAAAAACCATTTAACTATTGGA
ATGAAGTGAATTTCAACATGATTATCTGTCTTGAGGTTGCGGGCTCATTTGTGCATGAAAACTG
CTTTTTTTCTTTTGAGATTACTGCTAATTAAGTATGCAAATGGCTTTGTTTTAAATGTAAGGTG
GTTATTTTGAAGAGTTCTACTAGGGTAACAATGAGTGATTTGTTTGTTCATTTGTTTTTTAATA
AAGAAAATTCTTTATCTAAATATGAACTCAAATATTA

hide sequence

RefSeq Acc Id:

XM_039112350 ⟹ XP_038968278

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	125,558,451 - 125,652,547 (-)	NCBI
mRatBN7.2	6	119,828,823 - 119,922,936 (-)	NCBI

RefSeq Acc Id:

XM_039112351 ⟹ XP_038968279

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	125,573,680 - 125,736,576 (-)	NCBI
mRatBN7.2	6	119,844,071 - 120,006,190 (-)	NCBI

RefSeq Acc Id:

XM_063261972 ⟹ XP_063118042

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	125,558,451 - 125,735,421 (-)	NCBI

RefSeq Acc Id:

XM_063261973 ⟹ XP_063118043

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	125,558,451 - 125,646,066 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001382521	(Get FASTA)	NCBI Sequence Viewer
	XP_006240500	(Get FASTA)	NCBI Sequence Viewer
	XP_017449658	(Get FASTA)	NCBI Sequence Viewer
	XP_017449660	(Get FASTA)	NCBI Sequence Viewer
	XP_038968278	(Get FASTA)	NCBI Sequence Viewer
	XP_038968279	(Get FASTA)	NCBI Sequence Viewer
	XP_063118042	(Get FASTA)	NCBI Sequence Viewer
	XP_063118043	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL81720	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000063163
	ENSRNOP00000063163.2
	ENSRNOP00000072518.2
	ENSRNOP00000089479.1
	ENSRNOP00000091483
	ENSRNOP00000091483.1
	ENSRNOP00000100212.1
	ENSRNOP00000101420.1
	ENSRNOP00000102579.1

RefSeq Acc Id:	XP_006240500 ⟸ XM_006240438
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6ABQ6 (UniProtKB/TrEMBL), A0A8I6A7D1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEGEGGGSGGAGTSGDSGDGGEQLLTVKHELRTAYGKVFLVRKISGHDAGKLYAMKVLKKATIV QKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHE VQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADEAERAYSFCGTI EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQG MSSVAKDLLQRLLMKDPKKRLGCGPRDAEEIKEHLFFEKINWDDLAAKKVPAPFKPVIRDELDV SNFAEEFTEMDPTYSPAALPQSSERLFQGYSFVAPSILFKRNAAVIDPLQFHMGVDRPGVTNVA RSAMMKDSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKTNQAFAVKIISKRMEANTQKEITALK LCEGHPNVVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD VGVVHRDLKPENLLFTDENDNLEIKVIDFGFARLKPPDNQPLKTPCFTLHYAAPELLTHNGYDE SCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQ GLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKATFHAFNKYKREG FCLQNVDKAPLAKRRKMKRTSTSTETRSSSSESSRSSSSHSHGKTTPTKTLQPSNPTEGSNPDT LFQFSD hide sequence

RefSeq Acc Id:	XP_017449658 ⟸ XM_017594169
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6A7D1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL SQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADEA ERAYSFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI LKSEPPYPQGMSSVAKDLLQRLLMKDPKKRLGCGPRDAEEIKEHLFFEKINWDDLAAKKVPAPF KPVIRDELDVSNFAEEFTEMDPTYSPAALPQSSERLFQGYSFVAPSILFKRNAAVIDPLQFHMG VDRPGVTNVARSAMMKDSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKTNQAFAVKIISKRMEA NTQKEITALKLCEGHPNVVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRK LVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKVIDFGFARLKPPDNQPLKTPCFTLHYAAP ELLTHNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKN VSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKATF HAFNKYKREGFCLQNVDKAPLAKRRKMKRTSTSTETRSSSSESSRSSSSHSHGKTTPTKTLQPS NPTEGSNPDTLFQFSD hide sequence

RefSeq Acc Id:

XP_017449660 ⟸ XM_017594171

- Peptide Label:

isoform X4

- Sequence:

show sequence

MSSVAKDLLQRLLMKDPKKRLGCGPRDAEEIKEHLFFEKINWDDLAAKKVPAPFKPVIRDELDV
SNFAEEFTEMDPTYSPAALPQSSERLFQGYSFVAPSILFKRNAAVIDPLQFHMGVDRPGVTNVA
RSAMMKDSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKTNQAFAVKIISKRMEANTQKEITALK
LCEGHPNVVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD
VGVVHRDLKPENLLFTDENDNLEIKVIDFGFARLKPPDNQPLKTPCFTLHYAAPELLTHNGYDE
SCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQ
GLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKATFHAFNKYKREG
FCLQNVDKAPLAKRRKMKRTSTSTETRSSSSESSRSSSSHSHGKTTPTKTLQPSNPTEGSNPDT
LFQFSD

hide sequence

Ensembl Acc Id:

ENSRNOP00000072518 ⟸ ENSRNOT00000091693

Ensembl Acc Id:

ENSRNOP00000063163 ⟸ ENSRNOT00000064716

RefSeq Acc Id:	XP_038968278 ⟸ XM_039112350
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038968279 ⟸ XM_039112351
- Peptide Label:	isoform X5
- UniProtKB:	A6JEH6 (UniProtKB/TrEMBL), D3ZY17 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000091483 ⟸ ENSRNOT00000105060

Ensembl Acc Id:

ENSRNOP00000089479 ⟸ ENSRNOT00000107141

RefSeq Acc Id:	NP_001382521 ⟸ NM_001395592
- UniProtKB:	A0A8I6A7D1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118042 ⟸ XM_063261972
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6A7D1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118043 ⟸ XM_063261973
- Peptide Label:	isoform X3

Ensembl Acc Id:

ENSRNOP00000100212 ⟸ ENSRNOT00000152318

Ensembl Acc Id:

ENSRNOP00000102579 ⟸ ENSRNOT00000163303

Ensembl Acc Id:

ENSRNOP00000101420 ⟸ ENSRNOT00000170293

Protein Domains

AGC-kinase C-terminal Protein kinase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K366-F1-model_v2	AlphaFold	A0A0G2K366	1-798	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13694783

Promoter ID:

EPDNEW_R5300

Type:

single initiation site

Name:

Rps6ka5_1

Description:

ribosomal protein S6 kinase A5

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	6	124,735,781 - 124,735,841	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308336	AgrOrtholog
BioCyc Gene	G2FUF-36495	BioCyc
Ensembl Genes	ENSRNOG00000004362	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000064716	ENTREZGENE
	ENSRNOT00000064716.4	UniProtKB/TrEMBL
	ENSRNOT00000091693.3	UniProtKB/TrEMBL
	ENSRNOT00000105060	ENTREZGENE
	ENSRNOT00000105060.2	UniProtKB/TrEMBL
	ENSRNOT00000107141.2	UniProtKB/TrEMBL
	ENSRNOT00000152318.1	UniProtKB/TrEMBL
	ENSRNOT00000163303.1	UniProtKB/TrEMBL
	ENSRNOT00000170293.1	UniProtKB/TrEMBL
Gene3D-CATH	Phosphorylase Kinase, domain 1	UniProtKB/TrEMBL
	Transferase(Phosphotransferase) domain 1	UniProtKB/TrEMBL
InterPro	AGC-kinase_C	UniProtKB/TrEMBL
	Kinase-like_dom	UniProtKB/TrEMBL
	Pkinase_C	UniProtKB/TrEMBL
	Prot_kinase_cat_dom	UniProtKB/TrEMBL
	Protein_kinase_ATP_BS	UniProtKB/TrEMBL
	Ribosomal_S6_kinase_II	UniProtKB/TrEMBL
	Ser/Thr_prot_kinase_AS	UniProtKB/TrEMBL
NCBI Gene	314384	ENTREZGENE
PANTHER	RIBOSOMAL PROTEIN S6 KINASE	UniProtKB/TrEMBL
Pfam	Pkinase	UniProtKB/TrEMBL
	Pkinase_C	UniProtKB/TrEMBL
PhenoGen	Rps6ka5	PhenoGen
PIRSF	Ribsml_S6_kin_2	UniProtKB/TrEMBL
PROSITE	AGC_KINASE_CTER	UniProtKB/TrEMBL
	PROTEIN_KINASE_ATP	UniProtKB/TrEMBL
	PROTEIN_KINASE_DOM	UniProtKB/TrEMBL
	PROTEIN_KINASE_ST	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000004362	RatGTEx
SMART	S_TK_X	UniProtKB/TrEMBL
	S_TKc	UniProtKB/TrEMBL
Superfamily-SCOP	Kinase_like	UniProtKB/TrEMBL
UniProt	A0A0G2K366_RAT	UniProtKB/TrEMBL
	A0A8I6A7D1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ABQ6	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0L7S1_RAT	UniProtKB/TrEMBL
	A0ABK0LD43_RAT	UniProtKB/TrEMBL
	A0ABK0LJA5_RAT	UniProtKB/TrEMBL
	A6JEH6	ENTREZGENE, UniProtKB/TrEMBL
	D3ZY17	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-04-04	Rps6ka5	ribosomal protein S6 kinase A5	Rps6ka5	ribosomal protein S6 kinase, polypeptide 5	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Rps6ka5	ribosomal protein S6 kinase, polypeptide 5	Rps6ka5_predicted	ribosomal protein S6 kinase, polypeptide 5 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Rps6ka5_predicted	ribosomal protein S6 kinase, polypeptide 5 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - KEGG (archival)