Coq8a (coenzyme Q8A) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Coq8a (coenzyme Q8A) Rattus norvegicus
Analyze
Symbol: Coq8a
Name: coenzyme Q8A
RGD ID: 1308245
Description: Predicted to enable ADP binding activity; enzyme activator activity; and protein kinase activity. Predicted to be involved in phosphorylation and ubiquinone biosynthetic process. Predicted to be located in mitochondrion. Predicted to be extrinsic component of mitochondrial inner membrane. Human ortholog(s) of this gene implicated in primary coenzyme Q10 deficiency 4. Orthologous to human COQ8A (coenzyme Q8A); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: aarF domain containing kinase 3; aarF domain-containing protein kinase 3; Adck3; atypical kinase ADCK3, mitochondrial; atypical kinase COQ8A, mitochondrial; Cabc1; chaperone activity of bc1 complex-like; chaperone activity of bc1 complex-like, mitochondrial; chaperone, ABC1 activity of bc1 complex homolog; chaperone, ABC1 activity of bc1 complex homolog (S. pombe); chaperone, ABC1 activity of bc1 complex like; chaperone, ABC1 activity of bc1 complex like (S. pombe); chaperone-ABC1-like; coenzyme Q protein 8A; LOC360887; MGC109473
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81394,436,680 - 94,465,535 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1394,436,546 - 94,463,378 (-)EnsemblGRCr8
mRatBN7.21391,904,731 - 91,933,588 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1391,904,739 - 91,931,431 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1394,409,919 - 94,436,615 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01395,810,087 - 95,836,779 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01392,984,796 - 93,011,486 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01398,451,629 - 98,480,438 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1398,451,637 - 98,480,419 (-)Ensemblrn6Rnor6.0
Rnor_5.013103,459,488 - 103,488,382 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41395,869,376 - 95,896,742 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1391,452,681 - 91,479,411 (-)NCBICelera
RGSC_v3.11396,058,311 - 96,085,678 (-)NCBI
Cytogenetic Map13q26NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (ISO)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (ISO)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2,4-dinitrotoluene  (EXP)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
acetamide  (EXP)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (EXP)
ammonium chloride  (EXP)
aristolochic acid A  (ISO)
artesunate  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
benzo[b]fluoranthene  (ISO)
beta-lapachone  (ISO)
beta-naphthoflavone  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP)
bisphenol F  (ISO)
C60 fullerene  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
captan  (ISO)
carbon nanotube  (ISO)
carbonyl cyanide p-trifluoromethoxyphenylhydrazone  (ISO)
chlorpyrifos  (ISO)
chrysene  (ISO)
cisplatin  (ISO)
clofibric acid  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
D-glucose  (ISO)
deoxynivalenol  (ISO)
dibenzofurans  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (EXP)
diclofenac  (ISO)
dioxygen  (ISO)
diuron  (ISO)
doxorubicin  (ISO)
endosulfan  (EXP)
epoxiconazole  (ISO)
ethanol  (ISO)
ethyl methanesulfonate  (ISO)
flutamide  (EXP)
folpet  (ISO)
formaldehyde  (ISO)
fulvestrant  (ISO)
furan  (EXP)
gentamycin  (EXP)
glafenine  (EXP)
glucose  (ISO)
GSK-J4  (ISO)
hydrogen peroxide  (ISO)
inulin  (ISO)
ketamine  (EXP)
kojic acid  (ISO)
methamphetamine  (ISO)
methapyrilene  (EXP)
methimazole  (EXP)
methyl methanesulfonate  (ISO)
N-nitrosodiethylamine  (EXP)
nefazodone  (EXP)
nimesulide  (EXP)
okadaic acid  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
piperonyl butoxide  (EXP)
pirinixic acid  (ISO)
piroxicam  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
resveratrol  (ISO)
rotenone  (EXP)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sodium fluoride  (ISO)
Soman  (EXP)
sulfadimethoxine  (EXP)
tamoxifen  (ISO)
temozolomide  (ISO)
testosterone  (ISO)
tetrachloromethane  (EXP,ISO)
tetraphene  (ISO)
thapsigargin  (ISO)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (ISO)
toluene  (ISO)
Tributyltin oxide  (ISO)
trichloroethene  (EXP)
triphenyl phosphate  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
tunicamycin  (ISO)
ubiquinones  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vancomycin  (ISO)
vinclozolin  (EXP)
zinc atom  (EXP)
zinc(0)  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:15489334   PMID:18614015   PMID:20580948   PMID:25498144   PMID:26316108   PMID:27499294  


Genomics

Comparative Map Data
Coq8a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81394,436,680 - 94,465,535 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1394,436,546 - 94,463,378 (-)EnsemblGRCr8
mRatBN7.21391,904,731 - 91,933,588 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1391,904,739 - 91,931,431 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1394,409,919 - 94,436,615 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01395,810,087 - 95,836,779 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01392,984,796 - 93,011,486 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01398,451,629 - 98,480,438 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1398,451,637 - 98,480,419 (-)Ensemblrn6Rnor6.0
Rnor_5.013103,459,488 - 103,488,382 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41395,869,376 - 95,896,742 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1391,452,681 - 91,479,411 (-)NCBICelera
RGSC_v3.11396,058,311 - 96,085,678 (-)NCBI
Cytogenetic Map13q26NCBI
COQ8A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381226,940,294 - 226,987,544 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1226,938,143 - 226,987,569 (+)Ensemblhg38GRCh38
GRCh371227,127,995 - 227,175,245 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361225,194,561 - 225,241,869 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341223,434,723 - 223,481,979NCBI
Celera1200,318,754 - 200,366,064 (+)NCBICelera
Cytogenetic Map1q42.13NCBI
HuRef1197,644,481 - 197,691,835 (+)NCBIHuRef
CHM1_11228,400,721 - 228,447,734 (+)NCBICHM1_1
T2T-CHM13v2.01226,128,212 - 226,175,909 (+)NCBIT2T-CHM13v2.0
Coq8a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391179,992,803 - 180,023,585 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1179,992,803 - 180,027,167 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381180,165,238 - 180,196,020 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1180,165,238 - 180,199,602 (-)Ensemblmm10GRCm38
MGSCv371182,095,369 - 182,126,151 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361182,001,815 - 182,032,687 (-)NCBIMGSCv36mm8
Celera1187,227,199 - 187,260,762 (-)NCBICelera
Cytogenetic Map1H4NCBI
cM Map184.15NCBI
Coq8a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540610,180,415 - 10,217,505 (-)Ensembl
ChiLan1.0NW_00495540610,180,415 - 10,217,450 (-)NCBIChiLan1.0ChiLan1.0
COQ8A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2122,552,550 - 22,600,426 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1122,500,916 - 22,548,235 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01202,398,986 - 202,446,255 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11207,390,883 - 207,436,008 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1207,390,883 - 207,436,008 (+)EnsemblpanPan2panpan1.1
COQ8A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1738,085,441 - 38,123,037 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl738,085,885 - 38,122,974 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha737,568,104 - 37,605,640 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0737,920,065 - 37,957,603 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl737,919,586 - 37,957,561 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1737,759,043 - 37,796,576 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0737,766,177 - 37,803,725 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0738,036,583 - 38,074,123 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Coq8a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934451,063,067 - 51,098,871 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365263,648,386 - 3,684,238 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365263,648,447 - 3,684,230 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
COQ8A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1014,596,599 - 14,643,772 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11014,597,237 - 14,643,394 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21017,096,715 - 17,114,950 (+)NCBISscrofa10.2Sscrofa10.2susScr3
COQ8A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1252,780,593 - 2,827,565 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl252,779,504 - 2,826,538 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660552,745,315 - 2,814,504 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Coq8a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477112,274,812 - 12,316,587 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462477112,274,812 - 12,315,007 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Coq8a
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11058,499,250 - 58,528,280 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Coq8a
143 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:85
Count of miRNA genes:72
Interacting mature miRNAs:81
Transcripts:ENSRNOT00000030135
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738027Lnnr6Liver neoplastic nodule remodeling QTL 63.3liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)1365613454109350286Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1321120177109350286Rat
7387280Uae43Urinary albumin excretion QTL 435.690.4174urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1368983334109350286Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1367635937109350286Rat
1576318Schws5Schwannoma susceptibility QTL 50.0351nervous system integrity trait (VT:0010566)post-insult time to trigeminal nerve neurilemmoma formation (CMO:0002019)1364497900109350286Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1311081740103588154Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1338975045103588154Rat
8655951Rf63Renal function QTL 6312.2blood urea nitrogen amount (VT:0005265)plasma urea nitrogen level (CMO:0000586)1371610804109350286Rat
4889606Gluco63Glucose level QTL 632.860.003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1383286150109350286Rat
8655959Pur32Proteinuria QTL 328.4urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)137298450699745408Rat
2293687Bss26Bone structure and strength QTL 264.60.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1367635937109350286Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1364375743109350286Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131103588154Rat
2293341Glom15Glomerulus QTL 159.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1367635937109350286Rat

Markers in Region
RH129588  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21391,904,738 - 91,904,921 (+)MAPPERmRatBN7.2
Rnor_6.01398,451,637 - 98,451,819NCBIRnor6.0
Rnor_5.013103,459,496 - 103,459,678UniSTSRnor5.0
RGSC_v3.41395,869,376 - 95,869,558UniSTSRGSC3.4
Celera1391,452,681 - 91,452,863UniSTS
RH 3.4 Map13616.1UniSTS
Cytogenetic Map13q26UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 163 91 90 59 92 59 6 356 192 11 142 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000030135   ⟹   ENSRNOP00000036948
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1394,436,546 - 94,463,378 (-)Ensembl
mRatBN7.2 Ensembl1391,904,739 - 91,931,431 (-)Ensembl
Rnor_6.0 Ensembl1398,451,637 - 98,478,327 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000086306   ⟹   ENSRNOP00000070234
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1394,436,688 - 94,463,378 (-)Ensembl
mRatBN7.2 Ensembl1391,904,739 - 91,931,431 (-)Ensembl
Rnor_6.0 Ensembl1398,451,942 - 98,480,419 (-)Ensembl
RefSeq Acc Id: NM_001013185   ⟹   NP_001013203
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81394,436,688 - 94,463,378 (-)NCBI
mRatBN7.21391,904,739 - 91,931,431 (-)NCBI
Rnor_6.01398,451,637 - 98,478,327 (-)NCBI
Rnor_5.013103,459,488 - 103,488,382 (-)NCBI
RGSC_v3.41395,869,376 - 95,896,742 (-)RGD
Celera1391,452,681 - 91,479,411 (-)RGD
Sequence:
RefSeq Acc Id: XM_006250387   ⟹   XP_006250449
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81394,436,680 - 94,465,535 (-)NCBI
mRatBN7.21391,904,731 - 91,933,588 (-)NCBI
Rnor_6.01398,451,629 - 98,480,438 (-)NCBI
Rnor_5.013103,459,488 - 103,488,382 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001013203 (Get FASTA)   NCBI Sequence Viewer  
  NP_001416549 (Get FASTA)   NCBI Sequence Viewer  
  XP_006250449 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH91388 (Get FASTA)   NCBI Sequence Viewer  
  EDL94818 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000036948
  ENSRNOP00000036948.3
GenBank Protein Q5BJQ0 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001013203   ⟸   NM_001013185
- UniProtKB: Q5BJQ0 (UniProtKB/Swiss-Prot),   A6JGG2 (UniProtKB/TrEMBL),   A0A8L2R303 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006250449   ⟸   XM_006250387
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSRNOP00000036948   ⟸   ENSRNOT00000030135
Ensembl Acc Id: ENSRNOP00000070234   ⟸   ENSRNOT00000086306
Protein Domains
ABC1 atypical kinase-like   Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5BJQ0-F1-model_v2 AlphaFold Q5BJQ0 1-649 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699056
Promoter ID:EPDNEW_R9581
Type:single initiation site
Name:Coq8a_2
Description:coenzyme Q8A
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R9582  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01398,478,351 - 98,478,411EPDNEW
RGD ID:13699067
Promoter ID:EPDNEW_R9582
Type:initiation region
Name:Coq8a_1
Description:coenzyme Q8A
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R9581  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01398,480,418 - 98,480,478EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308245 AgrOrtholog
BioCyc Gene G2FUF-17133 BioCyc
Ensembl Genes ENSRNOG00000043201 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000030135 ENTREZGENE
  ENSRNOT00000030135.5 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7321446 IMAGE-MGC_LOAD
InterPro ADCK3_UbiB UniProtKB/Swiss-Prot
  Atypical_kinase_ADCK UniProtKB/Swiss-Prot
  Kinase-like_dom_sf UniProtKB/Swiss-Prot
  UbiB_dom UniProtKB/Swiss-Prot
KEGG Report rno:360887 UniProtKB/Swiss-Prot
MGC_CLONE MGC:109473 IMAGE-MGC_LOAD
NCBI Gene 360887 ENTREZGENE
PANTHER PTHR43851 UniProtKB/Swiss-Prot
  PTHR43851:SF1 UniProtKB/Swiss-Prot
Pfam ABC1 UniProtKB/Swiss-Prot
PhenoGen Coq8a PhenoGen
RatGTEx ENSRNOG00000043201 RatGTEx
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot
UniProt A0A8L2R303 ENTREZGENE, UniProtKB/TrEMBL
  A6JGG2 ENTREZGENE, UniProtKB/TrEMBL
  COQ8A_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-07-21 Coq8a  coenzyme Q8A  Adck3  aarF domain containing kinase 3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2011-07-29 Adck3  aarF domain containing kinase 3  Cabc1  chaperone, ABC1 activity of bc1 complex homolog (S. pombe)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-09-29 Cabc1  chaperone, ABC1 activity of bc1 complex homolog (S. pombe)  Cabc1  chaperone, ABC1 activity of bc1 complex like (S. pombe)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Cabc1  chaperone, ABC1 activity of bc1 complex like (S. pombe)  Cabc1_predicted  chaperone, ABC1 activity of bc1 complex like (S. pombe) (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Cabc1_predicted  chaperone, ABC1 activity of bc1 complex like (S. pombe) (predicted)      Symbol and Name status set to approved 70820 APPROVED