Actr5 (actin related protein 5) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Actr5 (actin related protein 5) Rattus norvegicus
Analyze
Symbol: Actr5
Name: actin related protein 5
RGD ID: 1307958
Description: Predicted to be involved in several processes, including DNA metabolic process; regulation of embryonic development; and regulation of nucleobase-containing compound metabolic process. Predicted to be located in nucleus. Predicted to be part of Ino80 complex. Predicted to be active in cytoplasm. Orthologous to human ACTR5 (actin related protein 5); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; tetrachloromethane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: actin-related protein 5; ARP5 actin-related protein 5 homolog; ARP5 actin-related protein 5 homolog (yeast); LOC362258
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83167,702,299 - 167,715,736 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3167,702,482 - 167,715,730 (+)EnsemblGRCr8
mRatBN7.23147,282,461 - 147,295,870 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3147,282,624 - 147,296,110 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3151,114,460 - 151,127,710 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03159,613,777 - 159,627,027 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03157,349,405 - 157,362,640 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03155,118,567 - 155,132,073 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3155,119,042 - 155,131,829 (+)Ensemblrn6Rnor6.0
Rnor_5.03160,477,100 - 160,490,755 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43149,357,984 - 149,371,469 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3145,980,319 - 145,993,804 (+)NCBICelera
RGSC_v3.13149,255,715 - 149,276,796 (+)NCBI
Cytogenetic Map3q42NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA,IEA,ISO)
Ino80 complex  (IBA,IEA,ISO)
nucleus  (IEA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
3. Comprehensive gene review and curation RGD comprehensive gene curation
4. The INO80 family of chromatin-remodeling enzymes: regulators of histone variant dynamics. Watanabe S and Peterson CL, Cold Spring Harb Symp Quant Biol. 2010;75:35-42. doi: 10.1101/sqb.2010.75.063. Epub 2011 Apr 18.
Additional References at PubMed
PMID:18026119   PMID:19014934   PMID:20855601   PMID:21303910  


Genomics

Comparative Map Data
Actr5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83167,702,299 - 167,715,736 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3167,702,482 - 167,715,730 (+)EnsemblGRCr8
mRatBN7.23147,282,461 - 147,295,870 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3147,282,624 - 147,296,110 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3151,114,460 - 151,127,710 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03159,613,777 - 159,627,027 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03157,349,405 - 157,362,640 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03155,118,567 - 155,132,073 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3155,119,042 - 155,131,829 (+)Ensemblrn6Rnor6.0
Rnor_5.03160,477,100 - 160,490,755 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43149,357,984 - 149,371,469 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3145,980,319 - 145,993,804 (+)NCBICelera
RGSC_v3.13149,255,715 - 149,276,796 (+)NCBI
Cytogenetic Map3q42NCBI
ACTR5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382038,748,460 - 38,772,520 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2038,748,457 - 38,772,520 (+)Ensemblhg38GRCh38
GRCh372037,377,103 - 37,401,163 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362036,810,511 - 36,834,503 (+)NCBIBuild 36Build 36hg18NCBI36
Build 342036,810,510 - 36,834,247NCBI
Celera2034,087,821 - 34,111,793 (+)NCBICelera
Cytogenetic Map20q11.23NCBI
HuRef2034,114,312 - 34,138,221 (+)NCBIHuRef
CHM1_12037,281,298 - 37,305,288 (+)NCBICHM1_1
T2T-CHM13v2.02040,478,618 - 40,502,676 (+)NCBIT2T-CHM13v2.0
Actr5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392158,466,800 - 158,481,131 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2158,466,808 - 158,481,131 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm382158,624,881 - 158,639,211 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2158,624,888 - 158,639,211 (+)Ensemblmm10GRCm38
MGSCv372158,450,649 - 158,464,947 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv362158,316,373 - 158,330,639 (+)NCBIMGSCv36mm8
Celera2164,558,392 - 164,572,698 (+)NCBICelera
Cytogenetic Map2H1NCBI
cM Map278.72NCBI
Actr5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544517,991,969 - 18,024,818 (-)Ensembl
ChiLan1.0NW_00495544517,991,969 - 18,024,525 (-)NCBIChiLan1.0ChiLan1.0
ACTR5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22144,473,747 - 44,497,707 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12044,466,844 - 44,490,804 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02035,073,297 - 35,097,955 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12036,181,343 - 36,204,996 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2036,181,343 - 36,204,996 (+)EnsemblpanPan2panpan1.1
ACTR5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12427,154,283 - 27,190,947 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2427,153,314 - 27,179,191 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2426,799,885 - 26,836,498 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02427,850,631 - 27,887,304 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2427,849,688 - 27,875,547 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12427,124,352 - 27,160,983 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02427,232,706 - 27,269,345 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02427,720,799 - 27,757,436 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Actr5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640176,048,017 - 176,071,825 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365612,676,498 - 2,701,507 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365612,676,515 - 2,701,447 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACTR5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1741,702,540 - 41,724,393 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11741,702,273 - 41,724,398 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21747,193,583 - 47,215,920 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ACTR5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1224,983,536 - 25,008,225 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl224,980,945 - 25,007,881 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605073,813,425 - 73,838,411 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Actr5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624842912,336 - 933,573 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_004624842910,178 - 933,495 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Actr5
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v15137,969,906 - 137,983,165 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Actr5
57 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:547
Count of miRNA genes:271
Interacting mature miRNAs:337
Transcripts:ENSRNOT00000032943
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12879876Bw182Body weight QTL 1820.003body mass (VT:0001259)body weight (CMO:0000012)3141555229186555229Rat
2301411Bp320Blood pressure QTL 3200.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3141555229186555229Rat
1582233Insul10Insulin level QTL 105.40.0015blood insulin amount (VT:0001560)serum insulin level times blood glucose level (CMO:0002040)3133259579178259579Rat
1300113Bp176Blood pressure QTL 1763.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3166376089177728348Rat
12879872Cm97Cardiac mass QTL 970.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)3141555229186555229Rat
12879873Cm96Cardiac mass QTL 960.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)3141555229186555229Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3151075912189428310Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)3129154923182114333Rat
12879874Cm98Cardiac mass QTL 980.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)3141555229186555229Rat
12879875Kidm64Kidney mass QTL 640.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3141555229186555229Rat
1298068Bp167Blood pressure QTL 1670.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3161492708189428310Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)351581665184004958Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)367641776167835660Rat
8552791Vie2Viral induced encephalitis QTL 24.1brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)3166376089189428310Rat
61335Bp20Blood pressure QTL 203arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3161799493176036425Rat
1578754Stresp16Stress response QTL 1640.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)3133134628178134628Rat
1331726Bp208Blood pressure QTL 2083.129arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3161799270187311134Rat
1582213Insul6Insulin level QTL 63.70.0009blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)3155759447189428310Rat
1598854Memor10Memory QTL 102exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)3166376089189428310Rat
9589106Insul23Insulin level QTL 2313.860.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)3152055202189428310Rat
10755461Coatc16Coat color QTL 16coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)3142898802187898802Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)379649560177741895Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)3145335553189428310Rat
2303620Vencon4Ventilatory control QTL 43.9respiration trait (VT:0001943)tidal volume (CMO:0000222)3125116475170116475Rat
1582256Insul9Insulin level QTL 94.40.0016blood insulin amount (VT:0001560)absolute change in serum insulin level (CMO:0002038)3155759447189428310Rat
1576306Schws3Schwannoma susceptibility QTL 30.001nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)3139299381184299381Rat
1300159Kidm4Kidney mass QTL 43.83kidney mass (VT:0002707)right kidney wet weight to body weight ratio (CMO:0001953)3141508991177728348Rat
2301971Cm71Cardiac mass QTL 714.63heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)3131036586176036586Rat
631673Iddm13Insulin dependent diabetes mellitus QTL 131.30.663blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)3137114333182114333Rat
1582248Insul7Insulin level QTL 73.90.0041blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)3155759447189428310Rat
2301970Bw81Body weight QTL 815.19body mass (VT:0001259)body weight (CMO:0000012)3131036586176036586Rat
1578666Vnigr1Vascular neointimal growth QTL 14.6artery morphology trait (VT:0002191)artery lumen area (CMO:0001409)3151075912189428310Rat
1578656Vnigr2Vascular neointimal growth QTL 24.2artery morphology trait (VT:0002191)lesioned artery residual lumen area (CMO:0001417)3151075912189428310Rat
12879871Am7Aortic mass QTL 70.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)3141555229186555229Rat
631541Bp81Blood pressure QTL 814arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3144575244189428310Rat
2293087Iddm27Insulin dependent diabetes mellitus QTL 272.68blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)3160357340167835660Rat

Markers in Region
UniSTS:234587  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23147,292,752 - 147,293,056 (+)MAPPERmRatBN7.2
Rnor_6.03155,128,716 - 155,129,019NCBIRnor6.0
Rnor_5.03160,480,154 - 160,480,457UniSTSRnor5.0
RGSC_v3.43149,368,112 - 149,368,415UniSTSRGSC3.4
Celera3145,990,447 - 145,990,750UniSTS
Cytogenetic Map3q42UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 160 91 90 59 92 59 6 356 192 11 139 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000032943   ⟹   ENSRNOP00000036100
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3167,702,482 - 167,715,730 (+)Ensembl
mRatBN7.2 Ensembl3147,282,624 - 147,296,110 (+)Ensembl
Rnor_6.0 Ensembl3155,119,042 - 155,131,829 (+)Ensembl
RefSeq Acc Id: NM_001395604   ⟹   NP_001382533
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83167,702,492 - 167,715,736 (+)NCBI
mRatBN7.23147,282,624 - 147,295,869 (+)NCBI
RefSeq Acc Id: XM_039105508   ⟹   XP_038961436
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83167,702,966 - 167,715,732 (+)NCBI
mRatBN7.23147,283,099 - 147,295,870 (+)NCBI
RefSeq Acc Id: XM_039105509   ⟹   XP_038961437
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83167,709,026 - 167,715,732 (+)NCBI
mRatBN7.23147,289,161 - 147,295,870 (+)NCBI
RefSeq Acc Id: XM_039105510   ⟹   XP_038961438
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83167,705,966 - 167,715,732 (+)NCBI
mRatBN7.23147,286,098 - 147,295,870 (+)NCBI
RefSeq Acc Id: XM_063284187   ⟹   XP_063140257
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83167,702,299 - 167,713,378 (+)NCBI
Ensembl Acc Id: ENSRNOP00000036100   ⟸   ENSRNOT00000032943
RefSeq Acc Id: XP_038961436   ⟸   XM_039105508
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038961438   ⟸   XM_039105510
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038961437   ⟸   XM_039105509
- Peptide Label: isoform X3
RefSeq Acc Id: NP_001382533   ⟸   NM_001395604
- UniProtKB: D3ZAQ1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063140257   ⟸   XM_063284187
- Peptide Label: isoform X2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZAQ1-F1-model_v2 AlphaFold D3ZAQ1 1-517 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307958 AgrOrtholog
BioCyc Gene G2FUF-47005 BioCyc
Ensembl Genes ENSRNOG00000023989 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000032943 ENTREZGENE
  ENSRNOT00000032943.8 UniProtKB/TrEMBL
Gene3D-CATH 3.30.420.40 UniProtKB/TrEMBL
  Actin, Chain A, domain 4 UniProtKB/TrEMBL
InterPro Actin-like UniProtKB/TrEMBL
  Actin_CS UniProtKB/TrEMBL
  ATPase_NBD UniProtKB/TrEMBL
NCBI Gene 362258 ENTREZGENE
PANTHER Actin_like UniProtKB/TrEMBL
Pfam Actin UniProtKB/TrEMBL
PhenoGen Actr5 PhenoGen
PROSITE ACTINS_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000023989 RatGTEx
SMART ACTIN UniProtKB/TrEMBL
Superfamily-SCOP SSF53067 UniProtKB/TrEMBL
UniProt D3ZAQ1 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-03-25 Actr5  actin related protein 5  Actr5  ARP5 actin-related protein 5 homolog  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2016-04-13 Actr5  ARP5 actin-related protein 5 homolog  Actr5  ARP5 actin-related protein 5 homolog (yeast)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Actr5  ARP5 actin-related protein 5 homolog (yeast)   Actr5_predicted  ARP5 actin-related protein 5 homolog (yeast) (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Actr5_predicted  ARP5 actin-related protein 5 homolog (yeast) (predicted)      Symbol and Name status set to approved 70820 APPROVED