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Gene: Morf4l1 (mortality factor 4 like 1) Rattus norvegicus

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Symbol:

Morf4l1

Name:

mortality factor 4 like 1

RGD ID:

1307938

Description:

Predicted to enable chromatin binding activity. Predicted to be involved in double-strand break repair via homologous recombination; positive regulation of double-strand break repair via homologous recombination; and regulation of cell cycle. Predicted to act upstream of or within fibroblast proliferation. Predicted to be located in nucleus. Predicted to be part of NuA4 histone acetyltransferase complex; Sin3-type complex; and nucleosome. Orthologous to human MORF4L1 (mortality factor 4 like 1); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; INTERACTS WITH 4,4'-sulfonyldiphenol; bisphenol A; bisphenol F.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC300891; MORF-related gene 15 protein; mortality factor 4-like protein 1; transcription factor-like protein MRG15

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MORF4L1 (mortality factor 4 like 1)	RGD	RGD
Mus musculus (house mouse):	Morf4l1 (mortality factor 4 like 1)	RGD	RGD
Chinchilla lanigera (long-tailed chinchilla):	Morf4l1 (mortality factor 4 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MORF4L1 (mortality factor 4 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MORF4L1 (mortality factor 4 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Morf4l1 (mortality factor 4 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MORF4L1 (mortality factor 4 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MORF4L1 (mortality factor 4 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Morf4l1 (mortality factor 4 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Morf4l1 (mortality factor 4 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	MORF4L1 (mortality factor 4 like 1)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	MORF4L1 (mortality factor 4 like 1)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Mus musculus (house mouse):	Morf4l1 (mortality factor 4 like 1)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Morf4l1 (mortality factor 4 like 1)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	morf4l1 (mortality factor 4 like 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	EAF3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	EAF3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	MRG15	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	MRG15	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	mrg-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	mrg-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	morf4l1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	morf4l1	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Related Pseudogenes:

Morf4l1-ps4

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	99,522,801 - 99,544,432 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	99,500,898 - 99,544,331 (-)	Ensembl				GRCr8
mRatBN7.2	8	90,642,988 - 90,664,518 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	90,642,988 - 90,664,519 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	96,322,928 - 96,344,466 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	94,522,346 - 94,543,881 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	92,364,827 - 92,386,333 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	97,473,454 - 97,494,974 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	97,474,092 - 97,494,834 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	96,974,730 - 96,995,764 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	91,235,625 - 91,237,345	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	90,186,130 - 90,207,659 (-)	NCBI		Celera
Cytogenetic Map	8	q31	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

adenoid cystic carcinoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

Aroclor 1254 (ISO)

arsenite(3-) (ISO)

avobenzone (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP,ISO)

cadmium atom (ISO)

carbon nanotube (ISO)

chlordecone (ISO)

choline (ISO)

cisplatin (ISO)

copper atom (ISO)

copper(0) (ISO)

crocidolite asbestos (ISO)

dicrotophos (ISO)

doxorubicin (ISO)

ethanol (ISO)

folic acid (ISO)

gentamycin (EXP)

ivermectin (ISO)

L-methionine (ISO)

ochratoxin A (EXP)

perfluorooctanoic acid (ISO)

phenobarbital (ISO)

resveratrol (ISO)

rotenone (EXP)

sodium arsenite (ISO)

testosterone (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

triphenyl phosphate (ISO)

triptonide (ISO)

valproic acid (ISO)

WIN 55212-2 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell population proliferation (ISO)

chromatin organization (IEA)

DNA damage response (IEA)

DNA recombination (IEA)

DNA repair (IEA)

DNA-templated transcription (IEA)

double-strand break repair via homologous recombination (IEA,ISO,ISS)

positive regulation of double-strand break repair via homologous recombination (IEA,ISO)

regulation of cell cycle (IEA,ISO)

regulation of DNA-templated transcription (IEA)

Cellular Component

NuA4 histone acetyltransferase complex (IBA,IEA,ISO,ISS)

nuclear speck (IEA,ISO)

nucleus (IEA)

Sin3-type complex (IEA,ISO,ISS)

Molecular Function

chromatin binding (IEA,ISO)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

INO80 family mediated chromatin remodeling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	GOA pipeline	RGD automated data pipeline
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:14966270	PMID:15367658	PMID:15489334	PMID:15798182	PMID:17577209	PMID:20332121

Genomics

Comparative Map Data

Morf4l1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	99,522,801 - 99,544,432 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	99,500,898 - 99,544,331 (-)	Ensembl				GRCr8
mRatBN7.2	8	90,642,988 - 90,664,518 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	90,642,988 - 90,664,519 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	96,322,928 - 96,344,466 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	94,522,346 - 94,543,881 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	92,364,827 - 92,386,333 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	97,473,454 - 97,494,974 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	97,474,092 - 97,494,834 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	96,974,730 - 96,995,764 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	91,235,625 - 91,237,345	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	90,186,130 - 90,207,659 (-)	NCBI		Celera
Cytogenetic Map	8	q31	NCBI

MORF4L1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	78,872,890 - 78,898,139 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	78,810,487 - 78,903,078 (+)	Ensembl			hg38	GRCh38
GRCh37	15	79,165,232 - 79,190,481 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	76,952,227 - 76,977,130 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	15	76,952,226 - 76,977,127	NCBI
Celera	15	56,101,535 - 56,126,422 (+)	NCBI		Celera
Cytogenetic Map	15	q25.1	NCBI
HuRef	15	55,925,047 - 55,949,995 (+)	NCBI		HuRef
CHM1_1	15	79,283,306 - 79,308,262 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	15	76,736,571 - 76,761,812 (+)	NCBI		T2T-CHM13v2.0

Morf4l1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	89,973,722 - 89,996,873 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	89,973,718 - 89,996,827 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	9	90,091,669 - 90,114,820 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	90,091,665 - 90,114,774 (-)	Ensembl			mm10	GRCm38
MGSCv37	9	89,986,507 - 90,009,658 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	9	89,889,562 - 89,912,655 (-)	NCBI		MGSCv36	mm8
Celera	9	89,707,212 - 89,730,327 (-)	NCBI		Celera
Cytogenetic Map	9	E3.1	NCBI
cM Map	9	47.42	NCBI

Morf4l1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955533	14,730 - 27,643 (+)	Ensembl
ChiLan1.0	NW_004955533	14,770 - 28,290 (+)	NCBI	ChiLan1.0	ChiLan1.0

MORF4L1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	68,129,039 - 68,153,981 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	72,294,661 - 72,319,614 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	57,844,220 - 57,869,139 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	76,803,907 - 76,852,970 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	76,772,007 - 76,829,259 (+)	Ensembl			panPan2	panpan1.1

MORF4L1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	58,127,152 - 58,149,709 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	58,127,669 - 58,193,005 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	60,788,547 - 60,810,109 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	58,564,933 - 58,586,487 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	58,564,937 - 58,586,575 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	58,061,687 - 58,082,967 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	58,269,994 - 58,291,257 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	58,618,515 - 58,640,289 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Morf4l1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	119,225,891 - 119,249,166 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	37,073,895 - 37,097,235 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	37,073,920 - 37,097,216 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MORF4L1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	48,050,045 - 48,075,795 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	48,050,050 - 48,075,799 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	53,588,270 - 53,613,977 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MORF4L1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	4,500,848 - 4,520,830 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666048	137,324,127 - 137,351,056 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Morf4l1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624941	50,840 - 70,767 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624941	50,651 - 71,380 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Morf4l1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	12	5,315,871 - 5,338,159 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Morf4l1
159 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	151
Count of miRNA genes:	122
Interacting mature miRNAs:	130
Transcripts:	ENSRNOT00000019471
Prediction methods:	Microtar, Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300177	Cm2	Cardiac mass QTL 2	3.65		heart mass (VT:0007028)	heart weight (CMO:0000017)	8	63141536	109261840	Rat
1549909	Stresp11	Stress response QTL 11	6.83	0.0019	stress-related behavior trait (VT:0010451)	number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)	8	82352698	127352698	Rat
12879878	Bw183	Body weight QTL 183		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	8	62848139	107848139	Rat
1549908	Neudeg1	Neurodegradation QTL 1	5.5	0	nervous system integrity trait (VT:0010566)	logarithm of the ratio of the lesioned side motor neuron count to contralateral side motor neuron count (CMO:0001986)	8	58337123	103337123	Rat
12879879	Cm99	Cardiac mass QTL 99		0.001	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	62848139	107848139	Rat
1554321	Bmd3	Bone mineral density QTL 3	7.9	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	49849908	118871671	Rat
9590292	Uminl3	Urine mineral level QTL 3	3.62	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	8	80768445	125768445	Rat
1331804	Cm30	Cardiac mass QTL 30	3.77443		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	8	62970527	107970527	Rat
1578769	Uae31	Urinary albumin excretion QTL 31	3.3	0.001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	39106363	103375781	Rat
12879880	Cm100	Cardiac mass QTL 100		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	8	62848139	107848139	Rat
12879881	Cm101	Cardiac mass QTL 101		0.001	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	8	62848139	107848139	Rat
12879882	Am8	Aortic mass QTL 8		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	8	62848139	107848139	Rat
12879883	Kidm65	Kidney mass QTL 65		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	8	62848139	107848139	Rat
71120	Niddm21	Non-insulin dependent diabetes mellitus QTL 21	3.73		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	8	66992095	111992095	Rat
8693654	Alc32	Alcohol consumption QTL 32	2	0.755	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	8	97492344	116428905	Rat
1358912	Bw51	Body weight QTL 51	2.95		body mass (VT:0001259)	body weight (CMO:0000012)	8	60248093	105248093	Rat
634332	Pia18	Pristane induced arthritis QTL 18	4		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	8	84192326	132782436	Rat
1578765	Klgr1	Kidney lesion grade QTL 1	3.3	0.0001	kidney morphology trait (VT:0002135)	organ lesion measurement (CMO:0000677)	8	39106363	103375781	Rat
1300171	Bp184	Blood pressure QTL 184	3.66		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	8	79394435	132782436	Rat
1578755	Pur5	Proteinuria QTL 5	3.3	0.0001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	8	39106258	103375958	Rat
2313400	Anxrr25	Anxiety related response QTL 25			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	8	98145073	122898010	Rat
631210	Bw3	Body weight QTL3	5.9		mesenteric fat pad mass (VT:0010427)	mesenteric fat pad weight to body weight ratio (CMO:0000654)	8	61019838	121662124	Rat
2293697	Bmd39	Bone mineral density QTL 39			femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	8	62848139	107848139	Rat
8662823	Vetf5	Vascular elastic tissue fragility QTL 5	1.9		artery integrity trait (VT:0010639)	patent ductus arteriosus score (CMO:0002566)	8	63404444	108404444	Rat
1358896	Bp262	Blood pressure QTL 262	2.89		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	35464071	107982864	Rat
1331837	Bw23	Body weight QTL 23	4.19	0.00007	body mass (VT:0001259)	body weight (CMO:0000012)	8	55428416	107963099	Rat
1331838	Niddm61	Non-insulin dependent diabetes mellitus QTL 61	3.53	0.0004	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	8	62963099	107963099	Rat
8694446	Bw170	Body weight QTL 170	12.07	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	8	80768445	125768445	Rat
631650	Stl6	Serum triglyceride level QTL 6	4	0.0019	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	8	70041301	121080908	Rat
1331769	Rf39	Renal function QTL 39	3.871		urine output (VT:0003620)	timed urine volume (CMO:0000260)	8	50763951	107970527	Rat
1581557	Eae16	Experimental allergic encephalomyelitis QTL 16	3.8		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	8	68690349	119799881	Rat
10450865	Bw175	Body weight QTL 175	4.1		total fat pad mass (VT:0015008)	adipose tissue molecular composition measurement (CMO:0000484)	8	84192326	129192326	Rat
1358907	Cm40	Cardiac mass QTL 40	1.89		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	35464071	107982864	Rat
70197	BpQTLcluster8	Blood pressure QTL cluster 8	3.482		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	55428333	127966348	Rat
2316950	Scl66	Serum cholesterol level QTL 66	4.1		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	8	39106363	114525825	Rat
2300181	Bmd55	Bone mineral density QTL 55	5.7	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	85348065	130348065	Rat
724540	Uae8	Urinary albumin excretion QTL 8	5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	8	39106258	103375958	Rat
10402857	Bp380	Blood pressure QTL 380		0.95	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	62848139	107848139	Rat
1358892	Kidm26	Kidney mass QTL 26	3.69		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	8	35464071	107982864	Rat
631664	Hcar3	Hepatocarcinoma resistance QTL 3	2.9	0.0005	liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	8	62982864	107982864	Rat
2301402	Bp316	Blood pressure QTL 316		0.005	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	62848139	107848139	Rat
8694200	Abfw4	Abdominal fat weight QTL 4	9.07	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	8	80768445	125768445	Rat
8694392	Bw161	Body weight QTL 161	8.06	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	8	80768445	125768445	Rat
61437	Cia6	Collagen induced arthritis QTL 6			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	8	91340911	131690273	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001011999	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436476	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436477	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436478	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436479	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436480	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766445	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265200	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265201	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265202	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265203	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265204	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265205	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265206	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC078910	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ213551	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ220796	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222206	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ226047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000080421 ⟹ ENSRNOP00000075745

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	99,522,801 - 99,537,638 (-)	Ensembl
mRatBN7.2 Ensembl	8	90,643,182 - 90,657,825 (-)	Ensembl
Rnor_6.0 Ensembl	8	97,474,092 - 97,494,834 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000094232 ⟹ ENSRNOP00000086652

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	99,522,801 - 99,544,331 (-)	Ensembl
mRatBN7.2 Ensembl	8	90,642,991 - 90,664,519 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000103722 ⟹ ENSRNOP00000095145

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	99,522,801 - 99,544,331 (-)	Ensembl
mRatBN7.2 Ensembl	8	90,642,988 - 90,664,405 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000136145 ⟹ ENSRNOP00000100773

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	99,522,801 - 99,544,331 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000154424 ⟹ ENSRNOP00000109378

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	99,500,898 - 99,544,331 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000171731 ⟹ ENSRNOP00000106535

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	99,522,801 - 99,544,331 (-)	Ensembl

RefSeq Acc Id:

NM_001011999 ⟹ NP_001011999

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	99,522,801 - 99,544,331 (-)	NCBI
mRatBN7.2	8	90,642,988 - 90,664,518 (-)	NCBI
Rnor_6.0	8	97,473,454 - 97,494,974 (-)	NCBI
Rnor_5.0	8	96,974,730 - 96,995,764 (-)	NCBI
RGSC_v3.4	13	91,235,625 - 91,237,345 (-)	RGD
Celera	8	90,186,130 - 90,207,659 (-)	NCBI

Sequence:

show sequence

GACGGCGCTGGCAAATCGCGCCCAGGATGTAGAGCTGGCTGTTCCCGACGGCGCGTCTGACGCT
AAATTGGGTGGGGTAGAGAGTAGGGGGCGGTAGTCGGGGGTGGTGGGAGAAGGAGGAGGCGGCG
AATCACTTATAAATGGCGCCCAAGCAGGACCCGAAGCCTAAATTCCAGGAGGGCGAGCGAGTGC
TGTGCTTTCATGGGCCTCTTCTTTATGAAGCAAAGTGTGTAAAGGTTGCCATAAAGGACAAACA
AGTGAAGTATTTTATCCATTACAGTGGCTGGAATAAAAATTGGGATGAATGGGTGCCAGAAAGC
AGAGTGCTCAAATACGTGGACGCCAATTTGCAGAAACAGCGGGAACTTCAAAAGGCCAACCAGG
AACAATATGCAGAGGGCAAGATGAGAGGGGCTGCTCCAGGGAAGAAGACATCCGGTCTGCAACA
GAAAAATGTTGAAGTGAAAACAAAAAAGAACAAACAGAAAACACCTGGAAATGGAGATGGTGGC
AGTACCAGTGAGACCCCTCAGCCTCCTAGGAAGAAGCGAGCCCGGGTAGATCCAACCGTTGAAA
ATGAAGAAACATTCATGAACAGAGTTGAAGTTAAAGTGAAGATTCCTGAGGAGCTGAAACCATG
GCTTGTAGATGACTGGGACTTGATCACCAGACAAAAGCAGCTTTTTTATCTTCCTGCCAAGAAG
AATGTGGATTCCATTTTGGAGGATTATGCAAACTATAAGAAGTCTCGAGGAAATACAGATAATA
AGGAGTATGCTGTTAATGAGGTTGTGGCAGGGATAAAGGAGTACTTCAATGTAATGTTGGGCAC
TCAGCTACTCTACAAATTTGAGAGACCACAGTATGCTGAAATTCTGGCCGATCACCCGGATGCA
CCCATGTCCCAGGTGTATGGAGCGCCACACTTACTGAGATTGTTTGTGCGAATTGGAGCGATGT
TGGCCTATACACCTCTAGATGAGAAAAGCCTTGCTTTATTACTGAACTATCTACATGATTTCCT
CAAGTACCTGGCAAAGAATTCTGCAACTCTGTTCAGTGCCAGTGATTATGAAGTGGCTCCTCCT
GAGTACCATCGGAAAGCCGTGTGAGGAGTGTGCTCTCTCACTCGTGCTTGGATCTCTGTAAACA
GTTTGGTTCTTAGTCCTTCTCTTGTACAAATGATGTACTTTGAAGACCGTTAGTGTATAACAGA
GTTGATGTTTGTTTCCTGTTTGATTTTAAACAGAGAAAATAAAAGGAGTTAACTGCTCTTTTTT
TCTTTCTTTTTTTCATTTCAAAGTTTCTACCAGTGTATCAGTGATGGACAACGGAGAGACATGC
TGTAGAGTGTTTGCCTAGTTGACAAAGCTGCTTTTGAATGCTGGTGGTTCTGTTCCTTTGACAC
TACGCACTTTTATAATATGTGTTAATGCTCTATGACAAAATGCTCTGACTCCTAGTGCCAAAGG
TTCCCTTCAGTGTGTATAACTGAACACTCATCCATCTGTGCTCTTTTTTTTTTTTAAATGGTGC
TTAAAGAGCCCATCCTTTGCAAGTCATCCATGTTGTTCCTTAGGCATTTTATCTTTGCTCAATT
GTTAAAGAATGGTGGCTTGTTTTCATGGTTTTTGTATTTGTGTCTAATGCACGTTTTAACATGA
TAGACGCAATGCATCGTGTAGCTACAGTTTTATGGAAAAGTCAATCTTGTAGGAGTTGTTTTTC
AGATCTTCAATAAATTTTTTCTTTAAATTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_008766445 ⟹ XP_008764667

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	99,522,801 - 99,544,432 (-)	NCBI
mRatBN7.2	8	90,642,988 - 90,664,514 (-)	NCBI
Rnor_6.0	8	97,473,798 - 97,494,944 (-)	NCBI

Sequence:

show sequence

AGAGCTGGCTGTTCCCGACGGCGCGTCTGACGCTAAATTGGGTGGGGTAGAGAGTAGGGGGCGG
TAGTCGGGGGTGGTGGGAGAAGGAGGAGGCGGCGAATCACTTATAAATGGCGCCCAAGCAGGAC
CCGAAGCCTAAATTCCAGGAGGGCGAGCGAGTGCTGTGCTTTCATGGGCCTCTTCTTTATGAAG
CAAAGTGTGTAAAGGTTGCCATAAAGGACAAACAAGTGAAGTATTTTATCCATTACAGTGGCTG
GAATAAAAAAAGTGCTGTGAGGCCCAGGCGCTCTGAAAAATCTTTGAAGACACGTGAGGATATT
GTAGCCCTTTTTCCTGTTCCTGAAGGAGCTCCCTCAGTACACCACCCCCTCCTGACCTCTAGTT
GGGATGAATGGGTGCCAGAAAGCAGAGTGCTCAAATACGTGGACGCCAATTTGCAGAAACAGCG
GGAACTTCAAAAGGCCAACCAGGAACAATATGCAGAGGGCAAGATGAGAGGGGCTGCTCCAGGG
AAGAAGACATCCGGTCTGCAACAGAAAAATGTTGAAGTGAAAACAAAAAAGAACAAACAGAAAA
CACCTGGAAATGGAGATGGTGGCAGTACCAGTGAGACCCCTCAGCCTCCTAGGAAGAAGCGAGC
CCGGGTAGATCCAACCGTTGAAAATGAAGAAACATTCATGAACAGAGTTGAAGTTAAAGTGAAG
ATTCCTGAGGAGCTGAAACCATGGCTTGTAGATGACTGGGACTTGATCACCAGACAAAAGCAGC
TTTTTTATCTTCCTGCCAAGAAGAATGTGGATTCCATTTTGGAGGATTATGCAAACTATAAGAA
GTCTCGAGGAAATACAGATAATAAGGAGTATGCTGTTAATGAGGTTGTGGCAGGGATAAAGGAG
TACTTCAATGTAATGTTGGGCACTCAGCTACTCTACAAATTTGAGAGACCACAGTATGCTGAAA
TTCTGGCCGATCACCCGGATGCACCCATGTCCCAGGTGTATGGAGCGCCACACTTACTGAGATT
GTTTGTGCGAATTGGAGCGATGTTGGCCTATACACCTCTAGATGAGAAAAGCCTTGCTTTATTA
CTGAACTATCTACATGATTTCCTCAAGTACCTGGCAAAGAATTCTGCAACTCTGTTCAGTGCCA
GTGATTATGAAGTGGCTCCTCCTGAGTACCATCGGAAAGCCGTGTGAGGAGTGTGCTCTCTCAC
TCGTGCTTGGATCTCTGTAAACAGTTTGGTTCTTAGTCCTTCTCTTGTACAAATGATGTACTTT
GAAGACCGTTAGTGTATAACAGAGTTGATGTTTGTTTCCTGTTTGATTTTAAACAGAGAAAATA
AAAGGATATAACTGCTCCTTTTTTCTTTCTTTTTTTCATTTCAAAGTTTCTACCAGTGTATCAG
TGATGACAACGGAGAGACATGCTGTAGAGTGTTTGCCTAGTTGACAAAGCTGCTTTTGAATGCT
GGTGGTTCTGTTCCTTTGACA

hide sequence

RefSeq Acc Id:

XM_017595579 ⟹ XP_017451068

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	99,522,801 - 99,544,411 (-)	NCBI
mRatBN7.2	8	90,642,988 - 90,664,514 (-)	NCBI
Rnor_6.0	8	97,473,798 - 97,494,944 (-)	NCBI

Sequence:

show sequence

AGAGCTGGCTGTTCCCGACGGCGCGTCTGACGCTAAATTGGGTGGGGTAGAGAGTAGGGGGCGG
TAGTCGGGGGTGGTGGGAGAAGGAGGAGGCGGCGAATCACTTATAAATGGCGCCCAAGCAGGAC
CCGAAGCCTAAATTCCAGGAGGGCGAGCGAGTGCTGTGCTTTCATGGGCCTCTTCTTTATGAAG
CAAAGTGTGTAAAGGTTGCCATAAAGGACAAACAAGTGAAGTATTTTATCCATTACAGTGGCTG
GAATAAAAATGCTGTGAGGCCCAGGCGCTCTGAAAAATCTTTGAAGACACGTGAGGATATTGTA
GCCCTTTTTCCTGTTCCTGAAGGAGCTCCCTCAGTACACCACCCCCTCCTGACCTCTAGTTGGG
ATGAATGGGTGCCAGAAAGCAGAGTGCTCAAATACGTGGACGCCAATTTGCAGAAACAGCGGGA
ACTTCAAAAGGCCAACCAGGAACAATATGCAGAGGGCAAGATGAGAGGGGCTGCTCCAGGGAAG
AAGACATCCGGTCTGCAACAGAAAAATGTTGAAGTGAAAACAAAAAAGAACAAACAGAAAACAC
CTGGAAATGGAGATGGTGGCAGTACCAGTGAGACCCCTCAGCCTCCTAGGAAGAAGCGAGCCCG
GGTAGATCCAACCGTTGAAAATGAAGAAACATTCATGAACAGAGTTGAAGTTAAAGTGAAGATT
CCTGAGGAGCTGAAACCATGGCTTGTAGATGACTGGGACTTGATCACCAGACAAAAGCAGCTTT
TTTATCTTCCTGCCAAGAAGAATGTGGATTCCATTTTGGAGGATTATGCAAACTATAAGAAGTC
TCGAGGAAATACAGATAATAAGGAGTATGCTGTTAATGAGGTTGTGGCAGGGATAAAGGAGTAC
TTCAATGTAATGTTGGGCACTCAGCTACTCTACAAATTTGAGAGACCACAGTATGCTGAAATTC
TGGCCGATCACCCGGATGCACCCATGTCCCAGGTGTATGGAGCGCCACACTTACTGAGATTGTT
TGTGCGAATTGGAGCGATGTTGGCCTATACACCTCTAGATGAGAAAAGCCTTGCTTTATTACTG
AACTATCTACATGATTTCCTCAAGTACCTGGCAAAGAATTCTGCAACTCTGTTCAGTGCCAGTG
ATTATGAAGTGGCTCCTCCTGAGTACCATCGGAAAGCCGTGTGAGGAGTGTGCTCTCTCACTCG
TGCTTGGATCTCTGTAAACAGTTTGGTTCTTAGTCCTTCTCTTGTACAAATGATGTACTTTGAA
GACCGTTAGTGTATAACAGAGTTGATGTTTGTTTCCTGTTTGATTTTAAACAGAGAAAATAAAA
GGATATAACTGCTCCTTTTTTCTTTCTTTTTTTCATTTCAAAGTTTCTACCAGTGTATCAGTGA
TGACAACGGAGAGACATGCTGTAGAGTGTTTGCCTAGTTGACAAAGCTGCTTTTGAATGCTGGT
GGTTCTGTTCCTTTGACA

hide sequence

RefSeq Acc Id:

XM_063265200 ⟹ XP_063121270

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	99,522,801 - 99,544,390 (-)	NCBI

RefSeq Acc Id:

XM_063265201 ⟹ XP_063121271

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	99,522,801 - 99,544,390 (-)	NCBI

RefSeq Acc Id:

XM_063265202 ⟹ XP_063121272

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	99,522,801 - 99,544,390 (-)	NCBI

RefSeq Acc Id:

XM_063265203 ⟹ XP_063121273

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	99,522,801 - 99,544,390 (-)	NCBI

RefSeq Acc Id:

XM_063265204 ⟹ XP_063121274

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	99,522,801 - 99,544,411 (-)	NCBI

RefSeq Acc Id:

XM_063265205 ⟹ XP_063121275

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	99,522,801 - 99,543,998 (-)	NCBI

RefSeq Acc Id:

XM_063265206 ⟹ XP_063121276

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	99,522,801 - 99,543,979 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001011999	(Get FASTA)	NCBI Sequence Viewer
	NP_001423405	(Get FASTA)	NCBI Sequence Viewer
	NP_001423406	(Get FASTA)	NCBI Sequence Viewer
	NP_001423407	(Get FASTA)	NCBI Sequence Viewer
	NP_001423408	(Get FASTA)	NCBI Sequence Viewer
	NP_001423409	(Get FASTA)	NCBI Sequence Viewer
	XP_008764667	(Get FASTA)	NCBI Sequence Viewer
	XP_017451068	(Get FASTA)	NCBI Sequence Viewer
	XP_063121270	(Get FASTA)	NCBI Sequence Viewer
	XP_063121271	(Get FASTA)	NCBI Sequence Viewer
	XP_063121272	(Get FASTA)	NCBI Sequence Viewer
	XP_063121273	(Get FASTA)	NCBI Sequence Viewer
	XP_063121274	(Get FASTA)	NCBI Sequence Viewer
	XP_063121275	(Get FASTA)	NCBI Sequence Viewer
	XP_063121276	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH78910	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000086652
	ENSRNOP00000095145
GenBank Protein	Q6AYU1	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001011999 ⟸ NM_001011999

- UniProtKB:

Q6AYU1 (UniProtKB/Swiss-Prot), A6I217 (UniProtKB/TrEMBL), A0A8I6ANZ2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAPKQDPKPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPESRVLK
YVDANLQKQRELQKANQEQYAEGKMRGAAPGKKTSGLQQKNVEVKTKKNKQKTPGNGDGGSTSE
TPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDS
ILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQ
VYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLFSASDYEVAPPEYHR
KAV

hide sequence

RefSeq Acc Id:

XP_008764667 ⟸ XM_008766445

- Peptide Label:

isoform X3

- Sequence:

show sequence

MAPKQDPKPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKKSAVRPRRSEKSL
KTREDIVALFPVPEGAPSVHHPLLTSSWDEWVPESRVLKYVDANLQKQRELQKANQEQYAEGKM
RGAAPGKKTSGLQQKNVEVKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVDPTVENEETFMNR
VEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEV
VAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDE
KSLALLLNYLHDFLKYLAKNSATLFSASDYEVAPPEYHRKAV

hide sequence

RefSeq Acc Id:

XP_017451068 ⟸ XM_017595579

- Peptide Label:

isoform X4

- Sequence:

show sequence

MAPKQDPKPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNAVRPRRSEKSLK
TREDIVALFPVPEGAPSVHHPLLTSSWDEWVPESRVLKYVDANLQKQRELQKANQEQYAEGKMR
GAAPGKKTSGLQQKNVEVKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVDPTVENEETFMNRV
EVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVV
AGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEK
SLALLLNYLHDFLKYLAKNSATLFSASDYEVAPPEYHRKAV

hide sequence

Ensembl Acc Id:

ENSRNOP00000075745 ⟸ ENSRNOT00000080421

Ensembl Acc Id:

ENSRNOP00000095145 ⟸ ENSRNOT00000103722

Ensembl Acc Id:

ENSRNOP00000086652 ⟸ ENSRNOT00000094232

RefSeq Acc Id:	XP_063121274 ⟸ XM_063265204
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063121273 ⟸ XM_063265203
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6ANZ2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121272 ⟸ XM_063265202
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063121271 ⟸ XM_063265201
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6ANZ2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121270 ⟸ XM_063265200
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6ANZ2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121275 ⟸ XM_063265205
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063121276 ⟸ XM_063265206
- Peptide Label:	isoform X8

Ensembl Acc Id:

ENSRNOP00000100773 ⟸ ENSRNOT00000136145

Ensembl Acc Id:

ENSRNOP00000109378 ⟸ ENSRNOT00000154424

Ensembl Acc Id:

ENSRNOP00000106535 ⟸ ENSRNOT00000171731

Protein Domains

Chromo MRG Tudor-knot

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6AYU1-F1-model_v2	AlphaFold	Q6AYU1	1-323	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13696177

Promoter ID:

EPDNEW_R6702

Type:

initiation region

Name:

Morf4l1_1

Description:

mortality factor 4 like 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	8	97,494,910 - 97,494,970	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307938	AgrOrtholog
BioCyc Gene	G2FUF-29568	BioCyc
Ensembl Genes	ENSRNOG00000058412	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000094232	ENTREZGENE
	ENSRNOT00000103722	ENTREZGENE
Gene3D-CATH	1.10.274.30	UniProtKB/Swiss-Prot
	2.30.30.140	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7131534	IMAGE-MGC_LOAD
InterPro	Chromo-like_dom_sf	UniProtKB/Swiss-Prot
	Chromo/chromo_shadow_dom	UniProtKB/Swiss-Prot
	MRG	UniProtKB/Swiss-Prot
	MRG_C_sf	UniProtKB/Swiss-Prot
	MRG_dom	UniProtKB/Swiss-Prot
	MSL3_chromo-like	UniProtKB/Swiss-Prot
KEGG Report	rno:300891	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:93669	IMAGE-MGC_LOAD
NCBI Gene	300891	ENTREZGENE
PANTHER	MORTALITY FACTOR 4-LIKE PROTEIN 1	UniProtKB/Swiss-Prot
	PTHR10880	UniProtKB/Swiss-Prot
Pfam	MRG	UniProtKB/Swiss-Prot
	MSL3_chromo-like	UniProtKB/Swiss-Prot
PhenoGen	Morf4l1	PhenoGen
PIRSF	HAT_Nua4_EAF3/MRG15	UniProtKB/Swiss-Prot
PROSITE	MRG	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000058412	RatGTEx
SMART	CHROMO	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF54160	UniProtKB/Swiss-Prot
UniProt	A0A8I6A2P7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ANZ2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2RBP0_RAT	UniProtKB/TrEMBL
	A0ABK0LH13_RAT	UniProtKB/TrEMBL
	A0ABK0LRG8_RAT	UniProtKB/TrEMBL
	A0ABK0LTI8_RAT	UniProtKB/TrEMBL
	A6I216_RAT	UniProtKB/TrEMBL
	A6I217	ENTREZGENE, UniProtKB/TrEMBL
	A6I218	ENTREZGENE, UniProtKB/TrEMBL
	A6I219_RAT	UniProtKB/TrEMBL
	MO4L1_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-12-06	Morf4l1	mortality factor 4 like 1	Morf4l1_predicted	mortality factor 4 like 1 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Morf4l1_predicted	mortality factor 4 like 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

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Imported Disease Annotations - CTD

RGD Manual Annotations