Ube2d1 (ubiquitin-conjugating enzyme E2D 1) - Rat Genome Database

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Gene: Ube2d1 (ubiquitin-conjugating enzyme E2D 1) Rattus norvegicus
Analyze
Symbol: Ube2d1
Name: ubiquitin-conjugating enzyme E2D 1
RGD ID: 1307886
Description: Enables ubiquitin-protein transferase activity. Predicted to be involved in several processes, including negative regulation of TORC1 signaling; positive regulation of protein ubiquitination; and protein K48-linked ubiquitination. Predicted to act upstream of or within several processes, including TORC1 signaling; positive regulation of protein polyubiquitination; and protein polyubiquitination. Predicted to be located in cytoplasm. Predicted to be part of protein-containing complex. Predicted to be active in nucleus. Orthologous to human UBE2D1 (ubiquitin conjugating enzyme E2 D1); PARTICIPATES IN p53 signaling pathway; Endoplasmic Reticulum-associated degradation pathway; ubiquitin/proteasome degradation pathway; INTERACTS WITH 1,3-dinitrobenzene; 2,3,7,8-tetrachlorodibenzodioxine; 2-methoxyethanol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: (E3-independent) E2 ubiquitin-conjugating enzyme D1; E2 ubiquitin-conjugating enzyme D1; LOC361831; ubiquitin carrier protein D1; ubiquitin-conjugating enzyme E2 D1; ubiquitin-conjugating enzyme E2(17)KB 1; ubiquitin-conjugating enzyme E2-17 kDa 1; ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog; ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast); ubiquitin-protein ligase D1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82017,308,459 - 17,341,427 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2017,331,646 - 17,341,427 (+)EnsemblGRCr8
mRatBN7.22017,309,315 - 17,343,770 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2017,309,315 - 17,342,295 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2018,036,003 - 18,068,972 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02017,391,002 - 17,423,970 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02017,863,660 - 17,896,634 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02018,547,370 - 18,580,291 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2018,547,370 - 18,580,291 (+)Ensemblrn6Rnor6.0
Rnor_5.02020,714,050 - 20,746,253 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42018,040,687 - 18,086,179 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2018,708,139 - 18,741,072 (+)NCBICelera
RGSC_v3.12018,015,510 - 18,098,427 (+)NCBI
Cytogenetic Map20p11NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA,ISO,ISS)
cytosol  (IEA,ISO)
nucleus  (IBA)
protein-containing complex  (IEA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Members of the E2D (UbcH5) family mediate the ubiquitination of the conserved cysteine of Pex5p, the peroxisomal import receptor. Grou CP, etal., J Biol Chem. 2008 May 23;283(21):14190-7. doi: 10.1074/jbc.M800402200. Epub 2008 Mar 22.
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:15247280   PMID:16275645   PMID:18511420   PMID:18621737   PMID:18845142   PMID:19103148   PMID:20061386   PMID:21685362   PMID:22797923   PMID:22871113   PMID:23509263  


Genomics

Comparative Map Data
Ube2d1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82017,308,459 - 17,341,427 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2017,331,646 - 17,341,427 (+)EnsemblGRCr8
mRatBN7.22017,309,315 - 17,343,770 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2017,309,315 - 17,342,295 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2018,036,003 - 18,068,972 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02017,391,002 - 17,423,970 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02017,863,660 - 17,896,634 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02018,547,370 - 18,580,291 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2018,547,370 - 18,580,291 (+)Ensemblrn6Rnor6.0
Rnor_5.02020,714,050 - 20,746,253 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42018,040,687 - 18,086,179 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2018,708,139 - 18,741,072 (+)NCBICelera
RGSC_v3.12018,015,510 - 18,098,427 (+)NCBI
Cytogenetic Map20p11NCBI
UBE2D1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381058,335,006 - 58,370,748 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1058,334,975 - 58,370,751 (+)Ensemblhg38GRCh38
GRCh371060,094,766 - 60,130,508 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361059,764,745 - 59,800,515 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341059,764,744 - 59,800,515NCBI
Celera1053,359,675 - 53,395,445 (+)NCBICelera
Cytogenetic Map10q21.1NCBI
HuRef1054,083,602 - 54,119,377 (+)NCBIHuRef
CHM1_11060,376,518 - 60,412,297 (+)NCBICHM1_1
T2T-CHM13v2.01059,189,115 - 59,224,853 (+)NCBIT2T-CHM13v2.0
Ube2d1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391071,090,810 - 71,121,048 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1071,090,810 - 71,121,092 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381071,254,980 - 71,285,384 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1071,254,980 - 71,285,262 (-)Ensemblmm10GRCm38
MGSCv371070,717,728 - 70,748,010 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361070,650,280 - 70,680,533 (-)NCBIMGSCv36mm8
Celera1072,330,400 - 72,360,478 (-)NCBICelera
Cytogenetic Map10B5.3NCBI
cM Map1036.85NCBI
Ube2d1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542512,082,147 - 12,092,259 (+)Ensembl
ChiLan1.0NW_00495542512,073,267 - 12,090,613 (+)NCBIChiLan1.0ChiLan1.0
UBE2D1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2870,544,848 - 70,579,546 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11070,550,169 - 70,584,866 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01054,867,346 - 54,903,125 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11057,087,811 - 57,123,581 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1057,087,811 - 57,123,581 (+)EnsemblpanPan2panpan1.1
UBE2D1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1410,521,818 - 10,551,818 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl410,521,833 - 10,551,214 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha410,714,445 - 10,745,192 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0410,778,224 - 10,808,991 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl410,778,196 - 10,809,373 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1410,762,998 - 10,793,472 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0410,882,267 - 10,913,018 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0411,191,795 - 11,222,324 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Ube2d1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721370,535,461 - 70,568,965 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366144,621,127 - 4,655,244 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049366144,621,702 - 4,655,200 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UBE2D1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1492,294,642 - 92,330,541 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11492,296,314 - 92,330,432 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
UBE2D1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1972,930,653 - 72,965,351 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl972,928,836 - 72,965,286 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604833,832,383 - 33,868,082 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ube2d1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247915,213,967 - 5,248,129 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247915,214,261 - 5,248,138 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Ube2d1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11815,566,115 - 15,599,129 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Ube2d1
213 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:140
Count of miRNA genes:112
Interacting mature miRNAs:117
Transcripts:ENSRNOT00000000750
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4889610Pancm3Pancreatic morphology QTL 33.750.001pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)20418947649189476Rat
2317057Aia27Adjuvant induced arthritis QTL 272.83joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)20126925056Rat
1641915Colcr9Colorectal carcinoma resistance QTL 92.970.0024intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)20133724594Rat
7387283Uae44Urinary albumin excretion QTL 440.1712urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)20126128279Rat
4889870Pur30Proteinuria QTL 30190.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)20804392029865039Rat
7411668Foco32Food consumption QTL 3280.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20136600300Rat
2305926Iddm37Insulin dependent diabetes mellitus QTL 376blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)20153308346533083Rat
1354642Despr15Despair related QTL 150.0027locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)20124164241Rat
1558640Prcs2Prostate cancer susceptibility QTL 23.3prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)20134066551Rat
8694189Bw153Body weight QTL 1533.130.001body mass (VT:0001259)body weight gain (CMO:0000420)20129193376Rat
4889857Pur27Proteinuria QTL 2712.20.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)20127341128Rat
1598870Bp289Blood pressure QTL 2892.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)20821635953216359Rat
9590109Sffal8Serum free fatty acids level QTL 85.320.01blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)20129193376Rat
9589155Insul32Insulin level QTL 326.380.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)20129193376Rat
9590275Scort15Serum corticosterone level QTL 153.480.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20129193376Rat
1598858Cm61Cardiac mass QTL 613.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)20821635953216359Rat
7411650Foco23Food consumption QTL 2320.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20129193376Rat
2317851Alcrsp22Alcohol response QTL 223.20.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20127341128Rat
1598816Memor12Memory QTL 122.4exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)201224324249189476Rat
1641893Alcrsp7Alcohol response QTL 7response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20127341128Rat
6893685Bw111Body weight QTL 1112.70.004body mass (VT:0001259)body weight (CMO:0000012)20132578510Rat
9590252Scort12Serum corticosterone level QTL 1220.460.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20136600300Rat

Markers in Region
RH139575  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22017,342,003 - 17,342,200 (+)MAPPERmRatBN7.2
Rnor_6.02018,580,000 - 18,580,196NCBIRnor6.0
Rnor_5.02020,745,962 - 20,746,158UniSTSRnor5.0
RGSC_v3.42018,085,888 - 18,086,084UniSTSRGSC3.4
Celera2018,740,781 - 18,740,977UniSTS
RH 3.4 Map20206.65UniSTS
Cytogenetic Map20p11UniSTS
RH140507  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22017,341,923 - 17,342,096 (+)MAPPERmRatBN7.2
Rnor_6.02018,579,920 - 18,580,092NCBIRnor6.0
Rnor_5.02020,745,882 - 20,746,054UniSTSRnor5.0
RGSC_v3.42018,085,808 - 18,085,980UniSTSRGSC3.4
Celera2018,740,701 - 18,740,873UniSTS
Cytogenetic Map20p11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 163 91 90 59 92 59 6 356 192 11 142 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000000750   ⟹   ENSRNOP00000000750
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2017,332,125 - 17,341,427 (+)Ensembl
mRatBN7.2 Ensembl2017,309,315 - 17,342,295 (+)Ensembl
Rnor_6.0 Ensembl2018,547,370 - 18,580,291 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000101439   ⟹   ENSRNOP00000077838
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2017,331,646 - 17,341,427 (+)Ensembl
mRatBN7.2 Ensembl2017,310,153 - 17,342,295 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000114520   ⟹   ENSRNOP00000088240
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2017,333,174 - 17,341,427 (+)Ensembl
mRatBN7.2 Ensembl2017,334,041 - 17,342,295 (+)Ensembl
RefSeq Acc Id: NM_001108530   ⟹   NP_001102000
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82017,308,459 - 17,341,427 (+)NCBI
mRatBN7.22017,309,315 - 17,342,295 (+)NCBI
Rnor_6.02018,547,370 - 18,580,291 (+)NCBI
Rnor_5.02020,714,050 - 20,746,253 (+)NCBI
RGSC_v3.42018,040,687 - 18,086,179 (+)RGD
Celera2018,708,139 - 18,741,072 (+)RGD
Sequence:
RefSeq Acc Id: XM_017601687   ⟹   XP_017457176
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82017,309,880 - 17,341,425 (+)NCBI
mRatBN7.22017,310,663 - 17,343,770 (+)NCBI
Rnor_6.02018,547,506 - 18,580,291 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001102000 (Get FASTA)   NCBI Sequence Viewer  
  XP_017457176 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein D3ZDK2 (Get FASTA)   NCBI Sequence Viewer  
  EDL97256 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000000750.7
  ENSRNOP00000088240
RefSeq Acc Id: NP_001102000   ⟸   NM_001108530
- UniProtKB: D3ZDK2 (UniProtKB/Swiss-Prot),   A0A8I6A9L4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017457176   ⟸   XM_017601687
- Peptide Label: isoform X1
- UniProtKB: A0A8I6A9L4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000000750   ⟸   ENSRNOT00000000750
Ensembl Acc Id: ENSRNOP00000088240   ⟸   ENSRNOT00000114520
Ensembl Acc Id: ENSRNOP00000077838   ⟸   ENSRNOT00000101439
Protein Domains
UBC core

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZDK2-F1-model_v2 AlphaFold D3ZDK2 1-147 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13701553
Promoter ID:EPDNEW_R12077
Type:multiple initiation site
Name:Ube2d1_1
Description:ubiquitin-conjugating enzyme E2D 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.02018,547,375 - 18,547,435EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307886 AgrOrtholog
BioCyc Gene G2FUF-4046 BioCyc
BioCyc Pathway PWY-7511 [protein ubiquitination] BioCyc
BioCyc Pathway Image PWY-7511 BioCyc
Ensembl Genes ENSRNOG00000000611 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000000750.8 UniProtKB/Swiss-Prot
  ENSRNOT00000114520 ENTREZGENE
Gene3D-CATH 3.10.110.10 UniProtKB/Swiss-Prot
InterPro UBQ-conjugat_E2 UniProtKB/Swiss-Prot
  UBQ-conjugating_AS UniProtKB/Swiss-Prot
  UBQ-conjugating_enzyme/RWD UniProtKB/Swiss-Prot
KEGG Report rno:361831 UniProtKB/Swiss-Prot
NCBI Gene 361831 ENTREZGENE
PANTHER UBIQUITIN-CONJUGATING ENZYME E2 UniProtKB/Swiss-Prot
Pfam UQ_con UniProtKB/Swiss-Prot
PhenoGen Ube2d1 PhenoGen
PROSITE UBIQUITIN_CONJUGAT_1 UniProtKB/Swiss-Prot
  UBIQUITIN_CONJUGAT_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000000611 RatGTEx
SMART UBCc UniProtKB/Swiss-Prot
Superfamily-SCOP SSF54495 UniProtKB/Swiss-Prot
UniProt A0A8I5Y1N3_RAT UniProtKB/TrEMBL
  A0A8I6A9L4 ENTREZGENE, UniProtKB/TrEMBL
  D3ZDK2 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-08-01 Ube2d1  ubiquitin-conjugating enzyme E2D 1  Ube2d1  ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Ube2d1  ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast)   Ube2d1_predicted  ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast) (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Ube2d1_predicted  ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast) (predicted)      Symbol and Name status set to approved 70820 APPROVED