Apobec3 (apolipoprotein B mRNA editing enzyme catalytic subunit 3) - Rat Genome Database

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Gene: Apobec3 (apolipoprotein B mRNA editing enzyme catalytic subunit 3) Rattus norvegicus
Analyze
Symbol: Apobec3
Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3
RGD ID: 1307800
Description: Predicted to enable RNA binding activity and cytidine deaminase activity. Predicted to be involved in several processes, including DNA modification; cytidine to uridine editing; and defense response to symbiont. Predicted to act upstream of or within hematopoietic progenitor cell differentiation; regulation of defense response to virus; and regulation of viral life cycle. Predicted to be located in cytosol and nucleoplasm. Predicted to be active in P-body and nucleus. Orthologous to several human genes including APOBEC3D (apolipoprotein B mRNA editing enzyme catalytic subunit 3D) and APOBEC3F (apolipoprotein B mRNA editing enzyme catalytic subunit 3F); INTERACTS WITH acetamide; fipronil; paracetamol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Apobec3b; Apobec3f; apolipoprotein B editing complex 3; apolipoprotein B mRNA editing enzyme catalytic subunit 3B; apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B; apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F; DNA dC->dU-editing enzyme APOBEC3; LOC315137; MGC124783; probable DNA dC->dU-editing enzyme APOBEC3
RGD Orthologs
Human
Mouse
Bonobo
Dog
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87113,314,196 - 113,333,306 (+)NCBIGRCr8
mRatBN7.27111,433,789 - 111,453,032 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7111,433,764 - 111,452,922 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7113,181,634 - 113,200,966 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07115,405,176 - 115,424,510 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07115,374,524 - 115,393,857 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07121,108,108 - 121,128,346 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7121,109,241 - 121,128,542 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07121,099,574 - 121,118,684 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47118,121,580 - 118,140,691 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17118,145,775 - 118,174,915 (+)NCBI
Celera7107,763,814 - 107,782,772 (+)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA,IEA,ISO,ISS)
cytosol  (ISO)
nucleoplasm  (ISO)
nucleus  (IBA,ISO)
P-body  (IBA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Ribonuclease L is not critical for innate restriction and adaptive immunity against Friend retrovirus infection. Li SX, etal., Virology. 2013 Aug 15;443(1):134-42. doi: 10.1016/j.virol.2013.05.009. Epub 2013 May 29.
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:293683   PMID:12477932   PMID:16378963   PMID:16527742   PMID:16571802   PMID:18779051   PMID:18827027   PMID:20062055   PMID:21835787   PMID:22326345   PMID:22457529   PMID:22915799  
PMID:24029230  


Genomics

Comparative Map Data
Apobec3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87113,314,196 - 113,333,306 (+)NCBIGRCr8
mRatBN7.27111,433,789 - 111,453,032 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7111,433,764 - 111,452,922 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7113,181,634 - 113,200,966 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07115,405,176 - 115,424,510 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07115,374,524 - 115,393,857 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07121,108,108 - 121,128,346 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7121,109,241 - 121,128,542 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07121,099,574 - 121,118,684 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47118,121,580 - 118,140,691 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17118,145,775 - 118,174,915 (+)NCBI
Celera7107,763,814 - 107,782,772 (+)NCBICelera
Cytogenetic Map7q34NCBI
APOBEC3H
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382239,097,244 - 39,104,067 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2239,097,224 - 39,104,067 (+)EnsemblGRCh38hg38GRCh38
GRCh372239,493,249 - 39,500,072 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362237,823,236 - 37,829,946 (+)NCBINCBI36Build 36hg18NCBI36
Celera2223,295,267 - 23,302,100 (+)NCBICelera
Cytogenetic Map22q13.1NCBI
HuRef2222,460,538 - 22,467,233 (+)NCBIHuRef
CHM1_12239,452,189 - 39,458,934 (+)NCBICHM1_1
T2T-CHM13v2.02239,567,663 - 39,574,409 (+)NCBIT2T-CHM13v2.0
Apobec3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391579,774,620 - 79,802,419 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1579,775,860 - 79,800,107 (+)EnsemblGRCm39 Ensembl
GRCm381579,892,058 - 79,918,218 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1579,891,659 - 79,915,906 (+)EnsemblGRCm38mm10GRCm38
MGSCv371579,722,838 - 79,738,859 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361579,719,713 - 79,735,341 (+)NCBIMGSCv36mm8
Celera1582,011,222 - 82,026,327 (+)NCBICelera
Cytogenetic Map15E1NCBI
cM Map1537.85NCBI
APOBEC3H
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22348,947,853 - 48,952,770 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12251,639,344 - 51,642,634 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02220,003,585 - 20,010,741 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12237,821,315 - 37,828,153 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2237,821,315 - 37,828,153 (+)Ensemblpanpan1.1panPan2
APOBEC3Z3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11025,910,973 - 25,917,508 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1025,911,291 - 25,913,808 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1025,847,090 - 25,849,607 (-)NCBIDog10K_Boxer_Tasha
Dog10K_Boxer_Tasha1025,855,423 - 25,859,260 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01026,663,787 - 26,694,303 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1026,663,787 - 26,676,218 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11026,403,345 - 26,407,577 (-)NCBIUMICH_Zoey_3.1
UMICH_Zoey_3.11026,377,116 - 26,379,631 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01026,696,905 - 26,699,422 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01026,873,099 - 26,875,616 (-)NCBIUU_Cfam_GSD_1.0
APOBEC3H
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11921,734,362 - 21,749,148 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1921,742,084 - 21,749,288 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666045104,008,482 - 104,015,525 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Apobec3
80 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:66
Count of miRNA genes:59
Interacting mature miRNAs:63
Transcripts:ENSRNOT00000037134
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)7924703115097879Rat
61357Bp38Blood pressure QTL 381.60.052arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)741333674119109060Rat
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)743747012135012528Rat
631504Cm27Cardiac mass QTL 273.45heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)744421311118198041Rat
70173Niddm19Non-insulin dependent diabetes mellitus QTL 194.330.00005blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)764002457135012528Rat
2316947Rf58Renal function QTL 587.8kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)768938720113886318Rat
2316952Pur22Proteinuria QTL 225.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)768938720113886318Rat
2316955Stl24Serum triglyceride level QTL 247.1blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)768938720113886318Rat
631540Bw9Body weight QTL 94.5body mass (VT:0001259)body weight (CMO:0000012)769736226117455174Rat
1357338Stl17Serum triglyceride level QTL 173.23blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)769736356112729554Rat
634331Pia17Pristane induced arthritis QTL 174.7joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)773829340130221005Rat
7411654Foco25Food consumption QTL 259.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)775918751120918751Rat
7411607Foco15Food consumption QTL 150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)775918751120918751Rat
1331746Kidm9Kidney mass QTL 93.934kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)780221299112308525Rat
1331728Bp214Blood pressure QTL 2142.825arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)780221299124373579Rat
1331768Kidm10Kidney mass QTL 104.62096kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)780221299125221299Rat
2317052Aia17Adjuvant induced arthritis QTL 172.13joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)781737938126737938Rat
634322Bw12Body weight QTL 120body mass (VT:0001259)body weight (CMO:0000012)783153392128153392Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
1358914Bp266Blood pressure QTL 266arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
71114Niddm14Non-insulin dependent diabetes mellitus QTL 144.5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)784257275129257275Rat
2298475Eau6Experimental allergic uveoretinitis QTL 60.0029uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)784257275129257275Rat
1558655Swd4Spike wave discharge measurement QTL 43.680.0002brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge severity grade (CMO:0001988)786983365131983365Rat
1549899Stresp8Stress response QTL 84.370.0008stress-related behavior trait (VT:0010451)defensive burying duration (CMO:0001961)790482196135012528Rat
2299163Iddm34Insulin dependent diabetes mellitus QTL 342.71blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)791281130135012528Rat
631687Hcas1Hepatocarcinoma susceptibility QTL 13.90.001liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)791412594129807172Rat
2313102Bmd79Bone mineral density QTL 792.30.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)794811085116738842Rat
1357336Gluco6Glucose level QTL 63.4blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)794811326116294265Rat
731176Glom5Glomerulus QTL 52.50.0035kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)796670164135012528Rat
1331731Bp216Blood pressure QTL 2162.851arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7102297359133492884Rat
70159Bp61Blood pressure QTL 610.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7103146217116738842Rat
731174Uae23Urinary albumin excretion QTL 232.40.0042urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)7104603555135012528Rat
2306821Bp335Blood pressure QTL 3350.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7106571501135012528Rat
631663Bw6Body weight QTL 63.4body mass (VT:0001259)body weight (CMO:0000012)7111075573134976056Rat
1300112Bp183Blood pressure QTL 1833.51arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)7111182207135012528Rat

Markers in Region
BE118431  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27111,452,470 - 111,452,597 (+)MAPPERmRatBN7.2
Rnor_6.07121,127,885 - 121,128,011NCBIRnor6.0
Rnor_5.07121,118,223 - 121,118,349UniSTSRnor5.0
RGSC_v3.47118,140,230 - 118,140,356UniSTSRGSC3.4
Celera7107,782,311 - 107,782,437UniSTS
RH 3.4 Map7854.2UniSTS
Cytogenetic Map7q34UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 2 24 18 17 18 14 31
Low 1 42 25 15 2 15 3 3 58 21 10 11 3
Below cutoff 1 8 8 8 5 8 16 5

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000037134   ⟹   ENSRNOP00000034183
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7111,433,764 - 111,452,920 (+)Ensembl
Rnor_6.0 Ensembl7121,109,241 - 121,128,542 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000101240   ⟹   ENSRNOP00000096800
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7111,433,764 - 111,451,974 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000105852   ⟹   ENSRNOP00000081729
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7111,433,825 - 111,452,922 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000111377   ⟹   ENSRNOP00000095626
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7111,433,764 - 111,452,480 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000115637   ⟹   ENSRNOP00000092776
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7111,433,764 - 111,452,919 (+)Ensembl
RefSeq Acc Id: NM_001033703   ⟹   NP_001028875
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87113,314,196 - 113,333,306 (+)NCBI
mRatBN7.27111,433,819 - 111,452,932 (+)NCBI
Rnor_6.07121,109,250 - 121,128,346 (+)NCBI
Rnor_5.07121,099,574 - 121,118,684 (+)NCBI
RGSC_v3.47118,121,580 - 118,140,691 (+)RGD
Celera7107,763,814 - 107,782,772 (+)RGD
Sequence:
RefSeq Acc Id: XM_008765715   ⟹   XP_008763937
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87113,314,208 - 113,333,289 (+)NCBI
mRatBN7.27111,433,789 - 111,453,032 (+)NCBI
Rnor_6.07121,108,108 - 121,128,069 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063263614   ⟹   XP_063119684
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87113,314,207 - 113,333,289 (+)NCBI
RefSeq Acc Id: XM_063263615   ⟹   XP_063119685
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87113,314,208 - 113,333,289 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_001028875   ⟸   NM_001033703
- UniProtKB: Q3T1K0 (UniProtKB/TrEMBL),   F7EWS7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008763937   ⟸   XM_008765715
- Peptide Label: isoform X3
- UniProtKB: F7EWS7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000034183   ⟸   ENSRNOT00000037134
RefSeq Acc Id: ENSRNOP00000096800   ⟸   ENSRNOT00000101240
RefSeq Acc Id: ENSRNOP00000095626   ⟸   ENSRNOT00000111377
RefSeq Acc Id: ENSRNOP00000092776   ⟸   ENSRNOT00000115637
RefSeq Acc Id: ENSRNOP00000081729   ⟸   ENSRNOT00000105852
RefSeq Acc Id: XP_063119684   ⟸   XM_063263614
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063119685   ⟸   XM_063263615
- Peptide Label: isoform X2
Protein Domains
CMP/dCMP-type deaminase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P60705-F1-model_v2 AlphaFold P60705 1-429 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13695490
Promoter ID:EPDNEW_R6015
Type:initiation region
Name:Apobec3b_1
Description:apolipoprotein B mRNA editing enzyme catalytic subunit 3B
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.07121,109,239 - 121,109,299EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307800 AgrOrtholog
BioCyc Gene G2FUF-32732 BioCyc
Ensembl Genes ENSRNOG00000016852 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000037134 ENTREZGENE
  ENSRNOT00000037134.6 UniProtKB/TrEMBL
  ENSRNOT00000101240.1 UniProtKB/TrEMBL
  ENSRNOT00000105852.1 UniProtKB/TrEMBL
  ENSRNOT00000111377.1 UniProtKB/TrEMBL
  ENSRNOT00000115637.1 UniProtKB/TrEMBL
Gene3D-CATH Cytidine Deaminase, domain 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7929998 IMAGE-MGC_LOAD
InterPro APOBEC/CMP_deaminase_Zn-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CMP_dCMP_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cytidine_deaminase-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:315137 UniProtKB/TrEMBL
MGC_CLONE MGC:124783 IMAGE-MGC_LOAD
NCBI Gene 315137 ENTREZGENE
PANTHER DNA DC-DU-EDITING ENZYME APOBEC-3H UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MRNA EDITING ENZYME UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam APOBEC2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  APOBEC_C UniProtKB/TrEMBL
  NAD2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Apobec3 PhenoGen
PROSITE CYT_DCMP_DEAMINASES_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CYT_DCMP_DEAMINASES_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000016852 RatGTEx
Superfamily-SCOP SSF53927 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8I5ZTE1_RAT UniProtKB/TrEMBL
  A0A8I6AQ44_RAT UniProtKB/TrEMBL
  A0A8I6AW32_RAT UniProtKB/TrEMBL
  A0A8I6GL83_RAT UniProtKB/TrEMBL
  A6HSU6_RAT UniProtKB/TrEMBL
  A6HSU7_RAT UniProtKB/TrEMBL
  ABEC3_RAT UniProtKB/Swiss-Prot
  F7EWS7 ENTREZGENE, UniProtKB/TrEMBL
  P60705 ENTREZGENE
  Q3T1K0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-07-09 Apobec3  apolipoprotein B mRNA editing enzyme catalytic subunit 3  Apobec3b  apolipoprotein B mRNA editing enzyme catalytic subunit 3B  Name and Symbol changed 629549 APPROVED
2016-03-15 Apobec3b  apolipoprotein B mRNA editing enzyme catalytic subunit 3B  Apobec3b  apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-01-09 Apobec3b  apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B  Apobec3f  apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-09-25 Apobec3f  apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F  Apobec3  apolipoprotein B editing complex 3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Apobec3  apolipoprotein B editing complex 3  Apobec3_predicted  apolipoprotein B editing complex 3 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Apobec3_predicted  apolipoprotein B editing complex 3 (predicted)      Symbol and Name status set to approved 70820 APPROVED