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Gene: Cyrib (CYFIP related Rac1 interactor B) Rattus norvegicus

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Symbol:

Cyrib

Name:

CYFIP related Rac1 interactor B

RGD ID:

1307697

Description:

Predicted to enable MHC class Ib protein binding, via antigen binding activity groove and small GTPase binding activity. Predicted to be involved in several processes, including negative regulation of actin filament polymerization; positive regulation of memory T cell activation; and positive regulation of type II interferon production. Predicted to be located in cilium and mitochondrion. Orthologous to human CYRIB (CYFIP related Rac1 interactor B); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-diaminodiphenylmethane.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

CYFIP-related Rac1 interactor B; Fam49b; family with sequence similarity 49, member B; hypothetical protein LOC299909; LOC299909; RGD1307697; similar to 0910001A06Rik protein; uncharacterized protein LOC299909

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CYRIB (CYFIP related Rac1 interactor B)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, Panther
Mus musculus (house mouse):	Cyrib (CYFIP related Rac1 interactor B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cyrib (CYFIP related Rac1 interactor B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CYRIB (CYFIP related Rac1 interactor B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CYRIB (CYFIP related Rac1 interactor B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cyrib (CYFIP related Rac1 interactor B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CYRIB (CYFIP related Rac1 interactor B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CYRIB (CYFIP related Rac1 interactor B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cyrib (CYFIP related Rac1 interactor B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Cyrib (CYFIP related Rac1 interactor B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	CYRIA (CYFIP related Rac1 interactor A)	HGNC	OrthoDB
Alliance orthologs ³
Mus musculus (house mouse):	Cyrib (CYFIP related Rac1 interactor B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	CYRIB (CYFIP related Rac1 interactor B)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	fam49bb (family with sequence similarity 49 member Bb)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	fam49bb (family with sequence similarity 49 member Bb)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	R07G3.8	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	R07G3.8	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG32066	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	cyrib	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	cyrib	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	97,524,941 - 97,649,846 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	97,523,121 - 97,649,853 (-)	Ensembl				GRCr8
mRatBN7.2	7	95,633,876 - 95,760,588 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	95,633,876 - 95,697,686 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	97,406,820 - 97,531,642 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	99,608,486 - 99,733,302 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	99,530,454 - 99,655,160 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	104,514,566 - 104,641,875 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	104,516,391 - 104,556,419 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	91,517,911 - 91,644,771 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	101,150,480 - 101,275,452 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	92,233,570 - 92,357,399 (-)	NCBI		Celera
RGSC_v3.1	7	101,184,709 - 101,246,506 (-)	NCBI
Cytogenetic Map	7	q33	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

diastolic heart failure (ISO)

Experimental Liver Cirrhosis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,1-dichloroethene (ISO)

1,2-dimethylhydrazine (ISO)

1-naphthyl isothiocyanate (EXP)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2-bromohexadecanoic acid (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-diaminodiphenylmethane (EXP)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

acetamide (EXP)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene diol epoxide I (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (ISO)

Bisphenol B (ISO)

bisphenol F (ISO)

Butylbenzyl phthalate (ISO)

C60 fullerene (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

cannabidiol (ISO)

carbon nanotube (ISO)

coumestrol (ISO)

DDE (ISO)

dexamethasone (ISO)

dibutyl phthalate (EXP)

dicrotophos (ISO)

Enterolactone (ISO)

enzyme inhibitor (ISO)

ethanol (ISO)

hydroquinone O-beta-D-glucopyranoside (ISO)

indometacin (ISO)

ivermectin (ISO)

methapyrilene (ISO)

methylmercury chloride (ISO)

N-nitrosodimethylamine (EXP)

nickel atom (ISO)

oxaliplatin (EXP)

potassium chromate (ISO)

sodium arsenite (ISO)

succimer (ISO)

titanium dioxide (ISO)

topotecan (EXP)

triptonide (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to molecule of bacterial origin (IEA,ISO)

negative regulation of actin filament polymerization (IEA,ISO)

negative regulation of small GTPase mediated signal transduction (IEA,ISO)

positive regulation of memory T cell activation (IEA,ISO)

positive regulation of T cell activation (IBA,IEA,ISO)

positive regulation of T cell mediated cytotoxicity (IEA,ISO)

positive regulation of type II interferon production (IEA,ISO)

regulation of actin filament polymerization (IEA)

regulation of cell migration (IEA,ISO)

regulation of chemotaxis (IEA,ISO)

regulation of establishment of cell polarity (IEA,ISO)

regulation of mitochondrial fission (IEA,ISO)

Cellular Component

cilium (IEA,ISO)

membrane (IEA)

mitochondrion (IEA,ISO)

Molecular Function

MHC class Ib protein binding, via antigen binding groove (IEA,ISO)

protein binding (ISO)

small GTPase binding (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:19056867	PMID:20458337	PMID:22326026	PMID:22522492	PMID:22871113	PMID:23376485	PMID:29059164	PMID:30250061	PMID:31285585

Genomics

Comparative Map Data

Cyrib
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	97,524,941 - 97,649,846 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	97,523,121 - 97,649,853 (-)	Ensembl				GRCr8
mRatBN7.2	7	95,633,876 - 95,760,588 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	95,633,876 - 95,697,686 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	97,406,820 - 97,531,642 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	99,608,486 - 99,733,302 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	99,530,454 - 99,655,160 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	104,514,566 - 104,641,875 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	104,516,391 - 104,556,419 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	91,517,911 - 91,644,771 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	101,150,480 - 101,275,452 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	92,233,570 - 92,357,399 (-)	NCBI		Celera
RGSC_v3.1	7	101,184,709 - 101,246,506 (-)	NCBI
Cytogenetic Map	7	q33	NCBI

CYRIB
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	129,839,593 - 130,017,129 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	129,839,593 - 130,017,504 (-)	Ensembl			hg38	GRCh38
GRCh37	8	130,851,839 - 131,029,375 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	130,922,898 - 131,021,182 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	8	130,922,899 - 131,021,182	NCBI
Celera	8	127,031,822 - 127,130,443 (-)	NCBI		Celera
Cytogenetic Map	8	q24.21	NCBI
HuRef	8	126,170,455 - 126,302,342 (-)	NCBI		HuRef
CHM1_1	8	130,892,084 - 131,069,252 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	8	130,965,555 - 131,143,607 (-)	NCBI		T2T-CHM13v2.0

Cyrib
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	63,800,943 - 63,932,627 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	63,800,946 - 63,932,327 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	15	63,929,094 - 64,060,778 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	63,929,097 - 64,060,478 (-)	Ensembl			mm10	GRCm38
MGSCv37	15	63,760,649 - 63,892,010 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	15	63,758,763 - 63,890,121 (-)	NCBI		MGSCv36	mm8
Celera	15	65,431,654 - 65,563,033 (-)	NCBI		Celera
Cytogenetic Map	15	D1	NCBI
cM Map	15	28.16	NCBI

Cyrib
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955461	4,632,263 - 4,662,016 (-)	Ensembl
ChiLan1.0	NW_004955461	4,634,324 - 4,786,723 (-)	NCBI	ChiLan1.0	ChiLan1.0

CYRIB
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	147,210,064 - 147,386,043 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	122,726,860 - 122,902,812 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	126,478,020 - 126,653,936 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	129,209,655 - 129,341,048 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	129,209,655 - 129,272,844 (-)	Ensembl			panPan2	panpan1.1

CYRIB
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	26,942,036 - 27,056,547 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	26,942,229 - 27,003,644 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	26,909,797 - 27,057,242 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	27,286,332 - 27,433,998 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	27,286,332 - 27,432,203 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	27,002,963 - 27,150,335 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	27,123,335 - 27,270,680 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	27,423,241 - 27,570,947 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Cyrib
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	11,268,360 - 11,377,229 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936470	18,721,037 - 18,804,065 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936470	18,665,898 - 18,803,864 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CYRIB
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	4	10,476,137 - 10,643,395 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	10,736,165 - 10,859,545 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CYRIB
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	124,308,911 - 124,406,261 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	124,307,049 - 124,345,548 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666039	15,634,158 - 15,808,284 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cyrib
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624735	25,820,175 - 25,894,193 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624735	25,752,675 - 25,894,193 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Cyrib
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	238,158,043 - 238,284,855 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Cyrib
425 total Variants

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300179	Kidm5	Kidney mass QTL 5	3.51		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	7	92388565	119280177	Rat
1331728	Bp214	Blood pressure QTL 214	2.825		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	82111245	123048330	Rat
2317035	Aia16	Adjuvant induced arthritis QTL 16	2.71		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	7	71103011	106126789	Rat
1358361	Sradr5	Stress Responsive Adrenal Weight QTL 5	5.55		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	7	31770293	110435881	Rat
70159	Bp61	Blood pressure QTL 61		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	73618702	118618702	Rat
631687	Hcas1	Hepatocarcinoma susceptibility QTL 1	3.9	0.001	liver integrity trait (VT:0010547)	liver tumorous lesion volume to total liver volume ratio (CMO:0001082)	7	93302009	131686183	Rat
1298525	Cm1	Cardiac mass QTL 1	2.7		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	7	56625161	101625161	Rat
1357338	Stl17	Serum triglyceride level QTL 17	3.23		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	71621154	114982716	Rat
61397	Bw17	Body weight QTL 17	6.3		body mass (VT:0001259)	body weight (CMO:0000012)	7	95485047	137014596	Rat
631504	Cm27	Cardiac mass QTL 27	3.45		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	7	46307490	127866166	Rat
634322	Bw12	Body weight QTL 12	0		body mass (VT:0001259)	body weight (CMO:0000012)	7	85043242	130043242	Rat
70173	Niddm19	Non-insulin dependent diabetes mellitus QTL 19	4.33	0.00005	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	7	85497398	130497398	Rat
1549899	Stresp8	Stress response QTL 8	4.37	0.0008	stress-related behavior trait (VT:0010451)	defensive burying duration (CMO:0001961)	7	92362341	137014596	Rat
1331723	Bw25	Body weight QTL 25	3.348		body mass (VT:0001259)	body weight (CMO:0000012)	7	96700404	111672180	Rat
2317052	Aia17	Adjuvant induced arthritis QTL 17	2.13		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	7	83626689	128626689	Rat
631529	Tls2	T-lymphoma susceptibility QTL 2	0	0.001	thymus integrity trait (VT:0010555)	percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)	7	82111382	132099989	Rat
1559283	Emca4	Estrogen-induced mammary cancer QTL 4	3.7		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	7	63889858	108889858	Rat
1300151	Bp181	Blood pressure QTL 181	3.36		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	7	55498584	105834451	Rat
1643004	Pain2	Pain QTL 2	1		mechanical nociception trait (VT:0002734)	self mutilation severity score (CMO:0002145)	7	10112916	99900612	Rat
1300149	Cm6	Cardiac mass QTL 6	4.09		heart mass (VT:0007028)	heart left ventricle weight to body weight ratio (CMO:0000530)	7	1	104117804	Rat
7411607	Foco15	Food consumption QTL 15		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	77807807	122807807	Rat
631201	Panci1	Pancreas inflammation QTL 1	0	0.001	pancreas integrity trait (VT:0010560)	percentage of study population displaying chronic pancreatitis at a point in time (CMO:0001214)	7	73557047	118557047	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	1509236	116977875	Rat
1331768	Kidm10	Kidney mass QTL 10	4.62096		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	7	82111245	123048330	Rat
2313102	Bmd79	Bone mineral density QTL 79	2.3	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	7	96700404	118618702	Rat
61357	Bp38	Blood pressure QTL 38	1.6	0.052	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	40540077	123682549	Rat
2316947	Rf58	Renal function QTL 58	7.8		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	7	49682832	115766396	Rat
10450862	Kidm55	Kidney mass QTL 55	4.9		kidney mass (VT:0002707)	kidney weight (CMO:0000081)	7	72725037	117725037	Rat
1298528	Bp169	Blood pressure QTL 169		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	62963207	107963207	Rat
1331746	Kidm9	Kidney mass QTL 9	3.934		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	7	82111245	134948181	Rat
1576303	Ept7	Estrogen-induced pituitary tumorigenesis QTL 7	3.7		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	7	63889858	108889858	Rat
7411654	Foco25	Food consumption QTL 25	9.3	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	77807807	122807807	Rat
10450856	Livw4	Liver weight QTL 4	3.8		liver mass (VT:0003402)	liver weight (CMO:0000092)	7	72725037	117725037	Rat
2316955	Stl24	Serum triglyceride level QTL 24	7.1		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	7	49682832	115766396	Rat
10402855	Bp379	Blood pressure QTL 379		0.21	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	78682549	123682549	Rat
2316952	Pur22	Proteinuria QTL 22	5.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	7	49682832	115766396	Rat
631540	Bw9	Body weight QTL 9	4.5		body mass (VT:0001259)	body weight (CMO:0000012)	7	71621154	119349044	Rat
1358891	Bp265	Blood pressure QTL 265	2.21		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	71827901	136544683	Rat

Markers in Region

RH12645

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	95,635,771 - 95,635,956 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	104,516,462 - 104,516,646	NCBI	Rnor6.0
Rnor_5.0	7	91,519,807 - 91,519,991	UniSTS	Rnor5.0
RGSC_v3.4	7	101,150,553 - 101,150,737	UniSTS	RGSC3.4
Celera	7	92,233,643 - 92,233,827	UniSTS
Cytogenetic Map	7	q33	UniSTS

RH141686

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	95,650,786 - 95,650,969 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	104,531,927 - 104,532,109	NCBI	Rnor6.0
Rnor_5.0	7	91,535,064 - 91,535,246	UniSTS	Rnor5.0
RGSC_v3.4	7	101,165,579 - 101,165,761	UniSTS	RGSC3.4
Celera	7	92,247,544 - 92,247,726	UniSTS
RH 3.4 Map	7	661.8	UniSTS
Cytogenetic Map	7	q33	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
28	14	94	250	91	90	59	208	59	6	575	346	24	236	134	145	31	51	51

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001126267	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241634	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241635	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765501	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594751	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594752	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039078771	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039078773	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039078774	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039078775	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263248	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC166469	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212269	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ229856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000078116 ⟹ ENSRNOP00000073189

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	97,523,121 - 97,649,853 (-)	Ensembl
mRatBN7.2 Ensembl	7	95,640,002 - 95,697,510 (-)	Ensembl
Rnor_6.0 Ensembl	7	104,517,063 - 104,541,392 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000090784 ⟹ ENSRNOP00000070286

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	97,523,121 - 97,586,753 (-)	Ensembl
mRatBN7.2 Ensembl	7	95,633,876 - 95,697,686 (-)	Ensembl
Rnor_6.0 Ensembl	7	104,516,391 - 104,556,419 (-)	Ensembl

RefSeq Acc Id:

NM_001126267 ⟹ NP_001119739

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	97,524,941 - 97,649,812 (-)	NCBI
mRatBN7.2	7	95,635,699 - 95,760,588 (-)	NCBI
Rnor_6.0	7	104,516,389 - 104,641,795 (-)	NCBI
Rnor_5.0	7	91,517,911 - 91,644,771 (-)	NCBI
RGSC_v3.4	7	101,150,480 - 101,275,452 (-)	RGD
Celera	7	92,233,570 - 92,357,399 (-)	RGD

Sequence:

show sequence

TTTGCTGCTGCTGCTTGCCGCTGCGGCGGGGCCGCTCGCGAACCTGCGGCGGGGACGCGCGAGC
CGCCGACCCGGAAGCGGCGTGTGTGCACCGCAGGCTCCCGCCGCCAGCTCGCCCGCTCGCCCGC
CCGTCGGACAGCCAGGAGAAGGCACCGAGGCCCGGAATCTGGGTAATCCTTTCAAGGCTGCCGC
ATTGATAGAAGGACGAGGACAGAATCACCAGCACTGGCTGAAGGTACCTTAACATGGGGAATCT
TCTTAAAGTTTTGACATGCACAGACCTTGAGCAGGGGCCAAATTTTTTCCTTGATTTTGAAAAT
GCCCAGCCTACAGAGTCTGAGAAGGAAATATATAATCAGGTGAATGTAGTGTTAAAAGATGCAG
AAGGCATCTTGGAGGACTTGCAGTCATACAGAGGAGCTGGCCACGAAATACGAGAGGCAATCCA
GCATCCAGCCGATGAGAAGTTGCAAGAGAAGGCATGGGGTGCAGTCGTGCCACTAGTAGGCAAA
TTAAAGAAATTTTACGAATTTTCTCAGAGATTAGAAGCAGCATTAAGAGGCCTTCTGGGAGCCT
TGACAAGCACACCATACTCCCCCACCCAGCATCTAGAGCGAGAGCAGGCTCTGGCTAAACAGTT
TGCAGAGATTCTTCACTTCACACTCCGGTTTGATGAACTCAAGATGACAAATCCTGCCATACAA
AATGATTTCAGCTACTATAGAAGAACATTGAGTCGTATGAGAATTAATAACGTCCCGGCAGAAG
GAGAAAATGAAGTAAATAATGAATTGGCAAATCGGATGTCTTTGTTTTATGCTGAGGCCACCCC
AATGCTGAAAACCTTAAGTGACGCAACAACAAAATTTGTATCAGAGAATAAAAATTTGCCAATA
GAAAATACCACAGACTGCTTAAGCACCATGGCAAGTGTATGCAGAGTCATGCTGGAGACGCCGG
AATATAGAAGCAGATTTACCAATGAAGAAACAGTATCATTCTGCTTGAGGGTAATGGTGGGTGT
CATAATACTCTATGACCACGTCCATCCAGTGGGAGCATTTGCCAAAACTTCTAAAATTGATATG
AAAGGTTGTATCAAAGTTCTTAAGGATCAACCTCCTAATAGTGTAGAAGGTCTTCTCAATGCTC
TCAGGTACACAACAAAACATTTGAACGATGAGACTACCTCCAAGCAAATTAGGTCCATGCTGCA
GTAAGAGCTGTGGTGCAAGCCCCTGCCGCGGATGGAGCACACAGTGTTCTTAGTGACCGAGAAT
GCACAGTCCTAGTGAATGCCATTAAATTTCCTTATTCTTGCTTTGGTTTCTTTCCTCTGTTCCT
CTTCCCACTTTTTTAATCATGTTCTTGTTCTTAAGACTTCTTTTCTGTGCCAAAATCAGTAAAG
TTATACTTTGAAAGGGATTTTGTCCTTTCAAAACAGGCCATCTAAGGCAGCTAATTACGCATTG
CATTGAGGTCTCTACTGAGAAAAGTTCTGTGACTTGAACTAAATATTTTTAAATGTGGATTTTT
TTTGAAAACTAATATTTAATATTGCTTCTCCTGCATGGCAAAACTGCCTATTCTGCTATTTAAA
ACCCTCATAAATTTATTTTCTACTGCCGCTTTTTCATGTGCAGCCAAAATGAAAATGTTTAAAT
TAACTGTGTTGTACAAATGGTACCCAACACAAACTTTTTTTAAATTAGTAAGACTTTTGTTTAA
AGTTTTAAGTTTGCATTTTGACTTTTTTTTGTAAGTTTGTATGTTGTGTGTTTAACCTTTATTA
ACTAACGTTAAAAACTGTGATGTGTGCGTAGATTATTACGTATGCATGTTCATGTTTAAGAATG
GCTGTTGATAAAATAAAATTCAGCTTTCCTTTTTCTAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006241633 ⟹ XP_006241695

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	97,524,941 - 97,586,673 (-)	NCBI
mRatBN7.2	7	95,633,876 - 95,697,522 (-)	NCBI
Rnor_6.0	7	104,514,566 - 104,578,771 (-)	NCBI
Rnor_5.0	7	91,517,911 - 91,644,771 (-)	NCBI

Sequence:

show sequence

GCCCTCCCCACTCCAAGCCGCCGTCGCCGCCGTCGCTTAGCTCTTCGCCGCTCCGCCAGAGGGG
CAGGTGCGGAGGGGCTCCCGGTCCGGCCGCCGCCGCCCGCTCCGGGCCCGGGGCTCCCTCTAGC
GCCGTGAGGAGCCTCCGGCGGCTGAAAGAAGCGCGGCCGAGTGCTTGAGTTCGCGGCGGATAGA
AGGACGAGGACAGAATCACCAGCACTGGCTGAAGGTACCTTAACATGGGGAATCTTCTTAAAGT
TTTGACATGCACAGACCTTGAGCAGGGGCCAAATTTTTTCCTTGATTTTGAAAATGCCCAGCCT
ACAGAGTCTGAGAAGGAAATATATAATCAGGTGAATGTAGTGTTAAAAGATGCAGAAGGCATCT
TGGAGGACTTGCAGTCATACAGAGGAGCTGGCCACGAAATACGAGAGGCAATCCAGCATCCAGC
CGATGAGAAGTTGCAAGAGAAGGCATGGGGTGCAGTCGTGCCACTAGTAGGCAAATTAAAGAAA
TTTTACGAATTTTCTCAGAGATTAGAAGCAGCATTAAGAGGCCTTCTGGGAGCCTTGACAAGCA
CACCATACTCCCCCACCCAGCATCTAGAGCGAGAGCAGGCTCTGGCTAAACAGTTTGCAGAGAT
TCTTCACTTCACACTCCGGTTTGATGAACTCAAGATGACAAATCCTGCCATACAAAATGATTTC
AGCTACTATAGAAGAACATTGAGTCGTATGAGAATTAATAACGTCCCGGCAGAAGGAGAAAATG
AAGTAAATAATGAATTGGCAAATCGGATGTCTTTGTTTTATGCTGAGGCCACCCCAATGCTGAA
AACCTTAAGTGACGCAACAACAAAATTTGTATCAGAGAATAAAAATTTGCCAATAGAAAATACC
ACAGACTGCTTAAGCACCATGGCAAGTGTATGCAGAGTCATGCTGGAGACGCCGGAATATAGAA
GCAGATTTACCAATGAAGAAACAGTATCATTCTGCTTGAGGGTAATGGTGGGTGTCATAATACT
CTATGACCACGTCCATCCAGTGGGAGCATTTGCCAAAACTTCTAAAATTGATATGAAAGGTTGT
ATCAAAGTTCTTAAGGATCAACCTCCTAATAGTGTAGAAGGTCTTCTCAATGCTCTCAGGTACA
CAACAAAACATTTGAACGATGAGACTACCTCCAAGCAAATTAGGTCCATGCTGCAGTAAGAGCT
GTGGTGCAAGCCCCTGCCGCGGATGGAGCACACAGTGTTCTTAGTGACCGAGAATGCACAGTCC
TAGTGAATGCCATTAAATTTCCTTATTCTTGCTTTGGTTTCTTTCCTCTGTTCCTCTTCCCACT
TTTTTAATCATGTTCTTGTTCTTAAGACTTCTTTTCTGTGCCAAAATCAGTAAAGTTATACTTT
GAAAGGGATTTTGTCCTTTCAAAACAGGCCATCTAAGGCAGCTAATTACGCATTGCATTGAGGT
CTCTACTGAGAAAAGTTCTGTGACTTGAACTAAATATTTTTAAATGTGGATTTTTTTTGAAAAC
TAATATTTAATATTGCTTCTCCTGCATGGCAAAACTGCCTATTCTGCTATTTAAAACCCTCATA
AATTTATTTTCTACTGCCGCTTTTTCATGTGCAGCCAAAATGAAAATGTTTAAATTAACTGTGT
TGTACAAATGGTACCCAACACAAACTTTTTTTAAATTAGTAAGACTTTTGTTTAAAGTTTTAAG
TTTGCATTTTGACTTTTTTTTGTAAGTTTGTATGTTGTGTGTTTAACCTTTATTAACTAACGTT
AAAAACTGTGATGTGTGCGTAGATTATTACGTATGCATGTTCATGTTTAAGAATGGCTGTTGAT
AAAATAAAATTCAGCTTTCCTTTTTCTAAGTGTGGCTTGGTTTACTGAGGTTTCTGAAGTTTTC
CCTGTATATATTTCTGTGGAATGCATATACACATTACATAATTTTTCTTTCTCTTAGGCAATAG
CTTTGTCTTTTTCGGTTGTTTCTCTTTACCTTTGTCTATGTACATAAGTTGAACTGTTTTTAAA
GCTGTTGTGTATAAGATGACCAGTGATTGTGTCATTAACTTGACTTCTGTTCTGATTTAATCTC
TGTGAGCATAGTCATAGAGGGGAAACCATACTTTCTCAGCTCTCAGTTTCAGGAGTAAAAGGGC
GGCAGCAGGAAGCACAGGGTGTCTCAAAAGCAAGAGGAACCCTTGACGTTGGAGGACAGTGAGC
ACTAAGAATACTTCCAGAGGAAATAAATGAAAGACTGTGATCTCACTAGTGGTAGGAAGTGACC
GTGTGTTTCAACTTAATATCATAAAGCCCAAGCCAGTGAAATTTATCTTGATTGAGAGAAGCTG
CTTGAAAGTTGTCTAATTCAGCCTTGTCAGTGGTTTAATCACAAGGTGATCTGAGGTGATACAG
TTAAAGTGGTTAACCATGGAAGATGATCACAAGCTGCCCTCTGGATCTTCTCCATCGGAGCGCC
CGCCTGGTGATAAAGTCCTGTTGACTTCTGTGGCCTCCTGCTTACTCATGTCCCATTTCACACC
CTGTGCTCCAGCTCAATTACTTGCTGTTTACAGATTGTTCATGTGGTGTTGCTTCCTAACTGAT
TTGCCGACAAACTGAACCTGGTCTTCTTTCTCTCCTTCATGTCTGTCTGACCAACACCAGCTTT
CATCTTTCAAAAATCAGTTTCTTTTACTTCCTCCAAAAACCATTTACATGACATTGGCCATGTC
TTCTAGGAGTCTTCTAACAGTATTATAATGGGTTTAATAGTGCACTCCACAAAAGGTAATGTCT
GTATGGAACCTGTACATACATATGGCTTCATTTCGAAGAAGGACATTTTCGGGTGAATGTAAGG
ACCTATGGATGACATCGTCCTGGATTAGAGTGGGCCCTAACCCCACTGACAAGTTCTTTTAAGA
GAAAAGAAGGGGAAACAGATGCAGAGGAGGTCTTGGGAGGATAGAGGCAAAGGTAAACACCATG
TCTTGAAATTCCCTGGACCACAAAAGCTAGAAGAGGGTCATGGAACACTTTCTATCAGAGCCTC
TGGAAGGAACCGACCCTGCTGCTCTTTTTATTTCAGACTTCTATTATGATGACAAAATAAGTTT
CTATTCTAAGCCACCTAGTTTGTGGTAAATTGTTACAGTCAACCTAAGCATTGAATACAACTGT
CTCACAAAACAGCCTGATATATCACTACACTTTTCTATCTTCTCTGATACTCATGAGAAGTCAC
AATGTCTAGATGCTGCAGAGACTGAGAACTTGAGAGAAGAGCCATGTCATATTTCTTCAGTGTC
CCCAAGCAAGGATCTTGCATAGTTCCTAAATATGGAGATCTGCCAAGTGAGTAATTGGATGGAG
TGCGTGAATCCTGATAAATGAGATAGATGGAGTAATCCTGCTGTGGCCTTTTCAGGTAACATGG
TTCACACTCTGCATGTTGAAGATTAAGTGGGCAAAAAAATCTTTAACTCTAGCCTAGGGGTCAG
TAGCCCAGTTGGTGGGCCAATTCACCTCCCTCTGTACTTACACAATCTGTGAATTAAGAATGAT
TTTTAAAACGTTGGGGGAATAAAGGATAACATGTTTTTCTAAAAGTTGAAAAATATTTTGTAGC
ATGAGAAAAGTATATGAAATTCAAACTCCAGTGTTCATAAATAAAAGTTTATTGAACATA

hide sequence

RefSeq Acc Id:

XM_006241635 ⟹ XP_006241697

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	97,524,941 - 97,586,673 (-)	NCBI
mRatBN7.2	7	95,633,876 - 95,697,499 (-)	NCBI
Rnor_6.0	7	104,514,569 - 104,578,752 (-)	NCBI
Rnor_5.0	7	91,517,911 - 91,644,771 (-)	NCBI

Sequence:

show sequence

GCCGTCGCCGCCGTCGCTTAGCTCTTCGCCGCTCCGCCAGAGGGGCAGGTGCGGAGGGGCTCCC
GGTCCGGCCGCCGCCGCCCGCTCCGGGCCCGGGGCTCCCTCTAGCGCCGTGAGGAGCCTCCGGC
GGCTGAAAGAAGCGCGGCCGAGTGCTTGAGTTCGCGGCGGATAGAAGGACGAGGACAGAATCAC
CAGCACTGGCTGAAGGTTTGCTGGCATGGGTAATCTCATTAAGGTGCTAACCAGGGACATAGAC
CACAATGCAGCACATTTTTTCTTGGACTTTGAAAATGCCCAGCCTACAGAGTCTGAGAAGGAAA
TATATAATCAGGTGAATGTAGTGTTAAAAGATGCAGAAGGCATCTTGGAGGACTTGCAGTCATA
CAGAGGAGCTGGCCACGAAATACGAGAGGCAATCCAGCATCCAGCCGATGAGAAGTTGCAAGAG
AAGGCATGGGGTGCAGTCGTGCCACTAGTAGGCAAATTAAAGAAATTTTACGAATTTTCTCAGA
GATTAGAAGCAGCATTAAGAGGCCTTCTGGGAGCCTTGACAAGCACACCATACTCCCCCACCCA
GCATCTAGAGCGAGAGCAGGCTCTGGCTAAACAGTTTGCAGAGATTCTTCACTTCACACTCCGG
TTTGATGAACTCAAGATGACAAATCCTGCCATACAAAATGATTTCAGCTACTATAGAAGAACAT
TGAGTCGTATGAGAATTAATAACGTCCCGGCAGAAGGAGAAAATGAAGTAAATAATGAATTGGC
AAATCGGATGTCTTTGTTTTATGCTGAGGCCACCCCAATGCTGAAAACCTTAAGTGACGCAACA
ACAAAATTTGTATCAGAGAATAAAAATTTGCCAATAGAAAATACCACAGACTGCTTAAGCACCA
TGGCAAGTGTATGCAGAGTCATGCTGGAGACGCCGGAATATAGAAGCAGATTTACCAATGAAGA
AACAGTATCATTCTGCTTGAGGGTAATGGTGGGTGTCATAATACTCTATGACCACGTCCATCCA
GTGGGAGCATTTGCCAAAACTTCTAAAATTGATATGAAAGGTTGTATCAAAGTTCTTAAGGATC
AACCTCCTAATAGTGTAGAAGGTCTTCTCAATGCTCTCAGGTACACAACAAAACATTTGAACGA
TGAGACTACCTCCAAGCAAATTAGGTCCATGCTGCAGTAAGAGCTGTGGTGCAAGCCCCTGCCG
CGGATGGAGCACACAGTGTTCTTAGTGACCGAGAATGCACAGTCCTAGTGAATGCCATTAAATT
TCCTTATTCTTGCTTTGGTTTCTTTCCTCTGTTCCTCTTCCCACTTTTTTAATCATGTTCTTGT
TCTTAAGACTTCTTTTCTGTGCCAAAATCAGTAAAGTTATACTTTGAAAGGGATTTTGTCCTTT
CAAAACAGGCCATCTAAGGCAGCTAATTACGCATTGCATTGAGGTCTCTACTGAGAAAAGTTCT
GTGACTTGAACTAAATATTTTTAAATGTGGATTTTTTTTGAAAACTAATATTTAATATTGCTTC
TCCTGCATGGCAAAACTGCCTATTCTGCTATTTAAAACCCTCATAAATTTATTTTCTACTGCCG
CTTTTTCATGTGCAGCCAAAATGAAAATGTTTAAATTAACTGTGTTGTACAAATGGTACCCAAC
ACAAACTTTTTTTAAATTAGTAAGACTTTTGTTTAAAGTTTTAAGTTTGCATTTTGACTTTTTT
TTGTAAGTTTGTATGTTGTGTGTTTAACCTTTATTAACTAACGTTAAAAACTGTGATGTGTGCG
TAGATTATTACGTATGCATGTTCATGTTTAAGAATGGCTGTTGATAAAATAAAATTCAGCTTTC
CTTTTTCTAAGTGTGGCTTGGTTTACTGAGGTTTCTGAAGTTTTCCCTGTATATATTTCTGTGG
AATGCATATACACATTACATAATTTTTCTTTCTCTTAGGCAATAGCTTTGTCTTTTTCGGTTGT
TTCTCTTTACCTTTGTCTATGTACATAAGTTGAACTGTTTTTAAAGCTGTTGTGTATAAGATGA
CCAGTGATTGTGTCATTAACTTGACTTCTGTTCTGATTTAATCTCTGTGAGCATAGTCATAGAG
GGGAAACCATACTTTCTCAGCTCTCAGTTTCAGGAGTAAAAGGGCGGCAGCAGGAAGCACAGGG
TGTCTCAAAAGCAAGAGGAACCCTTGACGTTGGAGGACAGTGAGCACTAAGAATACTTCCAGAG
GAAATAAATGAAAGACTGTGATCTCACTAGTGGTAGGAAGTGACCGTGTGTTTCAACTTAATAT
CATAAAGCCCAAGCCAGTGAAATTTATCTTGATTGAGAGAAGCTGCTTGAAAGTTGTCTAATTC
AGCCTTGTCAGTGGTTTAATCACAAGGTGATCTGAGGTGATACAGTTAAAGTGGTTAACCATGG
AAGATGATCACAAGCTGCCCTCTGGATCTTCTCCATCGGAGCGCCCGCCTGGTGATAAAGTCCT
GTTGACTTCTGTGGCCTCCTGCTTACTCATGTCCCATTTCACACCCTGTGCTCCAGCTCAATTA
CTTGCTGTTTACAGATTGTTCATGTGGTGTTGCTTCCTAACTGATTTGCCGACAAACTGAACCT
GGTCTTCTTTCTCTCCTTCATGTCTGTCTGACCAACACCAGCTTTCATCTTTCAAAAATCAGTT
TCTTTTACTTCCTCCAAAAACCATTTACATGACATTGGCCATGTCTTCTAGGAGTCTTCTAACA
GTATTATAATGGGTTTAATAGTGCACTCCACAAAAGGTAATGTCTGTATGGAACCTGTACATAC
ATATGGCTTCATTTCGAAGAAGGACATTTTCGGGTGAATGTAAGGACCTATGGATGACATCGTC
CTGGATTAGAGTGGGCCCTAACCCCACTGACAAGTTCTTTTAAGAGAAAAGAAGGGGAAACAGA
TGCAGAGGAGGTCTTGGGAGGATAGAGGCAAAGGTAAACACCATGTCTTGAAATTCCCTGGACC
ACAAAAGCTAGAAGAGGGTCATGGAACACTTTCTATCAGAGCCTCTGGAAGGAACCGACCCTGC
TGCTCTTTTTATTTCAGACTTCTATTATGATGACAAAATAAGTTTCTATTCTAAGCCACCTAGT
TTGTGGTAAATTGTTACAGTCAACCTAAGCATTGAATACAACTGTCTCACAAAACAGCCTGATA
TATCACTACACTTTTCTATCTTCTCTGATACTCATGAGAAGTCACAATGTCTAGATGCTGCAGA
GACTGAGAACTTGAGAGAAGAGCCATGTCATATTTCTTCAGTGTCCCCAAGCAAGGATCTTGCA
TAGTTCCTAAATATGGAGATCTGCCAAGTGAGTAATTGGATGGAGTGCGTGAATCCTGATAAAT
GAGATAGATGGAGTAATCCTGCTGTGGCCTTTTCAGGTAACATGGTTCACACTCTGCATGTTGA
AGATTAAGTGGGCAAAAAAATCTTTAACTCTAGCCTAGGGGTCAGTAGCCCAGTTGGTGGGCCA
ATTCACCTCCCTCTGTACTTACACAATCTGTGAATTAAGAATGATTTTTAAAACGTTGGGGGAA
TAAAGGATAACATGTTTTTCTAAAAGTTGAAAAATATTTTGTAGCATGAGAAAAGTATATGAAA
TTCAAACTCCAGTGTTCATAAATAAAAGTTTATTGAAC

hide sequence

RefSeq Acc Id:

XM_008765501 ⟹ XP_008763723

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	97,524,941 - 97,649,765 (-)	NCBI
mRatBN7.2	7	95,633,876 - 95,760,579 (-)	NCBI
Rnor_6.0	7	104,514,566 - 104,641,875 (-)	NCBI

Sequence:

show sequence

GCGCTTCCTCTTCCTCCTCGCCGCCTCTTCCTTTTATAGCGATTTCTGGTCGCGCCGGGGCCGG
GCCGCTGCTGCCGCCGTTTGCTGCTGCTGCTTGCCGCTGCGGCGGGGCCGCTCGCGAACCTGCG
GCGGGGACGCGCGAGCCGCCGACCCGGAAGCGGCGTGTGTGCACCGCAGGCTCCCGCCGCCAGC
TCGCCCGCTCGCCCGCCCGTCGGACAGCCAGGAGAAGGCACCGAGGCCCGGAATCTGGGTAATC
CTTTCAAGGCTGCCGCATTGATAGAAGGACGAGGACAGAATCACCAGCACTGGCTGAAGGTTTG
CTGGCATGGGTAATCTCATTAAGGTGCTAACCAGGGACATAGACCACAATGCAGCACATTTTTT
CTTGGACTTTGAAAATGCCCAGCCTACAGAGTCTGAGAAGGAAATATATAATCAGGTGAATGTA
GTGTTAAAAGATGCAGAAGGCATCTTGGAGGACTTGCAGTCATACAGAGGAGCTGGCCACGAAA
TACGAGAGGCAATCCAGCATCCAGCCGATGAGAAGTTGCAAGAGAAGGCATGGGGTGCAGTCGT
GCCACTAGTAGGCAAATTAAAGAAATTTTACGAATTTTCTCAGAGATTAGAAGCAGCATTAAGA
GGCCTTCTGGGAGCCTTGACAAGCACACCATACTCCCCCACCCAGCATCTAGAGCGAGAGCAGG
CTCTGGCTAAACAGTTTGCAGAGATTCTTCACTTCACACTCCGGTTTGATGAACTCAAGATGAC
AAATCCTGCCATACAAAATGATTTCAGCTACTATAGAAGAACATTGAGTCGTATGAGAATTAAT
AACGTCCCGGCAGAAGGAGAAAATGAAGTAAATAATGAATTGGCAAATCGGATGTCTTTGTTTT
ATGCTGAGGCCACCCCAATGCTGAAAACCTTAAGTGACGCAACAACAAAATTTGTATCAGAGAA
TAAAAATTTGCCAATAGAAAATACCACAGACTGCTTAAGCACCATGGCAAGTGTATGCAGAGTC
ATGCTGGAGACGCCGGAATATAGAAGCAGATTTACCAATGAAGAAACAGTATCATTCTGCTTGA
GGGTAATGGTGGGTGTCATAATACTCTATGACCACGTCCATCCAGTGGGAGCATTTGCCAAAAC
TTCTAAAATTGATATGAAAGGTTGTATCAAAGTTCTTAAGGATCAACCTCCTAATAGTGTAGAA
GGTCTTCTCAATGCTCTCAGGTACACAACAAAACATTTGAACGATGAGACTACCTCCAAGCAAA
TTAGGTCCATGCTGCAGTAAGAGCTGTGGTGCAAGCCCCTGCCGCGGATGGAGCACACAGTGTT
CTTAGTGACCGAGAATGCACAGTCCTAGTGAATGCCATTAAATTTCCTTATTCTTGCTTTGGTT
TCTTTCCTCTGTTCCTCTTCCCACTTTTTTAATCATGTTCTTGTTCTTAAGACTTCTTTTCTGT
GCCAAAATCAGTAAAGTTATACTTTGAAAGGGATTTTGTCCTTTCAAAACAGGCCATCTAAGGC
AGCTAATTACGCATTGCATTGAGGTCTCTACTGAGAAAAGTTCTGTGACTTGAACTAAATATTT
TTAAATGTGGATTTTTTTTGAAAACTAATATTTAATATTGCTTCTCCTGCATGGCAAAACTGCC
TATTCTGCTATTTAAAACCCTCATAAATTTATTTTCTACTGCCGCTTTTTCATGTGCAGCCAAA
ATGAAAATGTTTAAATTAACTGTGTTGTACAAATGGTACCCAACACAAACTTTTTTTAAATTAG
TAAGACTTTTGTTTAAAGTTTTAAGTTTGCATTTTGACTTTTTTTTGTAAGTTTGTATGTTGTG
TGTTTAACCTTTATTAACTAACGTTAAAAACTGTGATGTGTGCGTAGATTATTACGTATGCATG
TTCATGTTTAAGAATGGCTGTTGATAAAATAAAATTCAGCTTTCCTTTTTCTAAGTGTGGCTTG
GTTTACTGAGGTTTCTGAAGTTTTCCCTGTATATATTTCTGTGGAATGCATATACACATTACAT
AATTTTTCTTTCTCTTAGGCAATAGCTTTGTCTTTTTCGGTTGTTTCTCTTTACCTTTGTCTAT
GTACATAAGTTGAACTGTTTTTAAAGCTGTTGTGTATAAGATGACCAGTGATTGTGTCATTAAC
TTGACTTCTGTTCTGATTTAATCTCTGTGAGCATAGTCATAGAGGGGAAACCATACTTTCTCAG
CTCTCAGTTTCAGGAGTAAAAGGGCGGCAGCAGGAAGCACAGGGTGTCTCAAAAGCAAGAGGAA
CCCTTGACGTTGGAGGACAGTGAGCACTAAGAATACTTCCAGAGGAAATAAATGAAAGACTGTG
ATCTCACTAGTGGTAGGAAGTGACCGTGTGTTTCAACTTAATATCATAAAGCCCAAGCCAGTGA
AATTTATCTTGATTGAGAGAAGCTGCTTGAAAGTTGTCTAATTCAGCCTTGTCAGTGGTTTAAT
CACAAGGTGATCTGAGGTGATACAGTTAAAGTGGTTAACCATGGAAGATGATCACAAGCTGCCC
TCTGGATCTTCTCCATCGGAGCGCCCGCCTGGTGATAAAGTCCTGTTGACTTCTGTGGCCTCCT
GCTTACTCATGTCCCATTTCACACCCTGTGCTCCAGCTCAATTACTTGCTGTTTACAGATTGTT
CATGTGGTGTTGCTTCCTAACTGATTTGCCGACAAACTGAACCTGGTCTTCTTTCTCTCCTTCA
TGTCTGTCTGACCAACACCAGCTTTCATCTTTCAAAAATCAGTTTCTTTTACTTCCTCCAAAAA
CCATTTACATGACATTGGCCATGTCTTCTAGGAGTCTTCTAACAGTATTATAATGGGTTTAATA
GTGCACTCCACAAAAGGTAATGTCTGTATGGAACCTGTACATACATATGGCTTCATTTCGAAGA
AGGACATTTTCGGGTGAATGTAAGGACCTATGGATGACATCGTCCTGGATTAGAGTGGGCCCTA
ACCCCACTGACAAGTTCTTTTAAGAGAAAAGAAGGGGAAACAGATGCAGAGGAGGTCTTGGGAG
GATAGAGGCAAAGGTAAACACCATGTCTTGAAATTCCCTGGACCACAAAAGCTAGAAGAGGGTC
ATGGAACACTTTCTATCAGAGCCTCTGGAAGGAACCGACCCTGCTGCTCTTTTTATTTCAGACT
TCTATTATGATGACAAAATAAGTTTCTATTCTAAGCCACCTAGTTTGTGGTAAATTGTTACAGT
CAACCTAAGCATTGAATACAACTGTCTCACAAAACAGCCTGATATATCACTACACTTTTCTATC
TTCTCTGATACTCATGAGAAGTCACAATGTCTAGATGCTGCAGAGACTGAGAACTTGAGAGAAG
AGCCATGTCATATTTCTTCAGTGTCCCCAAGCAAGGATCTTGCATAGTTCCTAAATATGGAGAT
CTGCCAAGTGAGTAATTGGATGGAGTGCGTGAATCCTGATAAATGAGATAGATGGAGTAATCCT
GCTGTGGCCTTTTCAGGTAACATGGTTCACACTCTGCATGTTGAAGATTAAGTGGGCAAAAAAA
TCTTTAACTCTAGCCTAGGGGTCAGTAGCCCAGTTGGTGGGCCAATTCACCTCCCTCTGTACTT
ACACAATCTGTGAATTAAGAATGATTTTTAAAACGTTGGGGGAATAAAGGATAACATGTTTTTC
TAAAAGTTGAAAAATATTTTGTAGCATGAGAAAAGTATATGAAATTCAAACTCCAGTGTTCATA
AATAAAAGTTTATTGAACATA

hide sequence

RefSeq Acc Id:

XM_017594751 ⟹ XP_017450240

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	97,524,941 - 97,649,765 (-)	NCBI
mRatBN7.2	7	95,633,876 - 95,760,579 (-)	NCBI
Rnor_6.0	7	104,514,566 - 104,641,874 (-)	NCBI

Sequence:

show sequence

CGCTTCCTCTTCCTCCTCGCCGCCTCTTCCTTTTATAGCGATTTCTGGTCGCGCCGGGGCCGGG
CCGCTGCTGCCGCCGTTTGCTGCTGCTGCTTGCCGCTGCGGCGGGGCCGCTCGCGAACCTGCGG
CGGGGACGCGCGAGCCGCCGACCCGGAAGCGGCGTGTGTGCACCGCAGGCTCCCGCCGCCAGCT
CGCCCGCTCGCCCGCCCGTCGGACAGCCAGGAGAAGGCACCGAGGCCCGGAATCTGGGTAATCC
TTTCAAGGCTGCCGCATTGATAGAAGGACGAGGACAGAATCACCAGCACTGGCTGAAGTTCTCA
GGTTCCTTTCACAAGATTGAGGAGTTGAGTTTTCCCCAGCATTTCACCCTTTATTTGGTACCTT
AACATGGGGAATCTTCTTAAAGTTTTGACATGCACAGACCTTGAGCAGGGGCCAAATTTTTTCC
TTGATTTTGAAAATGCCCAGCCTACAGAGTCTGAGAAGGAAATATATAATCAGGTGAATGTAGT
GTTAAAAGATGCAGAAGGCATCTTGGAGGACTTGCAGTCATACAGAGGAGCTGGCCACGAAATA
CGAGAGGCAATCCAGCATCCAGCCGATGAGAAGTTGCAAGAGAAGGCATGGGGTGCAGTCGTGC
CACTAGTAGGCAAATTAAAGAAATTTTACGAATTTTCTCAGAGATTAGAAGCAGCATTAAGAGG
CCTTCTGGGAGCCTTGACAAGCACACCATACTCCCCCACCCAGCATCTAGAGCGAGAGCAGGCT
CTGGCTAAACAGTTTGCAGAGATTCTTCACTTCACACTCCGGTTTGATGAACTCAAGATGACAA
ATCCTGCCATACAAAATGATTTCAGCTACTATAGAAGAACATTGAGTCGTATGAGAATTAATAA
CGTCCCGGCAGAAGGAGAAAATGAAGTAAATAATGAATTGGCAAATCGGATGTCTTTGTTTTAT
GCTGAGGCCACCCCAATGCTGAAAACCTTAAGTGACGCAACAACAAAATTTGTATCAGAGAATA
AAAATTTGCCAATAGAAAATACCACAGACTGCTTAAGCACCATGGCAAGTGTATGCAGAGTCAT
GCTGGAGACGCCGGAATATAGAAGCAGATTTACCAATGAAGAAACAGTATCATTCTGCTTGAGG
GTAATGGTGGGTGTCATAATACTCTATGACCACGTCCATCCAGTGGGAGCATTTGCCAAAACTT
CTAAAATTGATATGAAAGGTTGTATCAAAGTTCTTAAGGATCAACCTCCTAATAGTGTAGAAGG
TCTTCTCAATGCTCTCAGGTACACAACAAAACATTTGAACGATGAGACTACCTCCAAGCAAATT
AGGTCCATGCTGCAGTAAGAGCTGTGGTGCAAGCCCCTGCCGCGGATGGAGCACACAGTGTTCT
TAGTGACCGAGAATGCACAGTCCTAGTGAATGCCATTAAATTTCCTTATTCTTGCTTTGGTTTC
TTTCCTCTGTTCCTCTTCCCACTTTTTTAATCATGTTCTTGTTCTTAAGACTTCTTTTCTGTGC
CAAAATCAGTAAAGTTATACTTTGAAAGGGATTTTGTCCTTTCAAAACAGGCCATCTAAGGCAG
CTAATTACGCATTGCATTGAGGTCTCTACTGAGAAAAGTTCTGTGACTTGAACTAAATATTTTT
AAATGTGGATTTTTTTTGAAAACTAATATTTAATATTGCTTCTCCTGCATGGCAAAACTGCCTA
TTCTGCTATTTAAAACCCTCATAAATTTATTTTCTACTGCCGCTTTTTCATGTGCAGCCAAAAT
GAAAATGTTTAAATTAACTGTGTTGTACAAATGGTACCCAACACAAACTTTTTTTAAATTAGTA
AGACTTTTGTTTAAAGTTTTAAGTTTGCATTTTGACTTTTTTTTGTAAGTTTGTATGTTGTGTG
TTTAACCTTTATTAACTAACGTTAAAAACTGTGATGTGTGCGTAGATTATTACGTATGCATGTT
CATGTTTAAGAATGGCTGTTGATAAAATAAAATTCAGCTTTCCTTTTTCTAAGTGTGGCTTGGT
TTACTGAGGTTTCTGAAGTTTTCCCTGTATATATTTCTGTGGAATGCATATACACATTACATAA
TTTTTCTTTCTCTTAGGCAATAGCTTTGTCTTTTTCGGTTGTTTCTCTTTACCTTTGTCTATGT
ACATAAGTTGAACTGTTTTTAAAGCTGTTGTGTATAAGATGACCAGTGATTGTGTCATTAACTT
GACTTCTGTTCTGATTTAATCTCTGTGAGCATAGTCATAGAGGGGAAACCATACTTTCTCAGCT
CTCAGTTTCAGGAGTAAAAGGGCGGCAGCAGGAAGCACAGGGTGTCTCAAAAGCAAGAGGAACC
CTTGACGTTGGAGGACAGTGAGCACTAAGAATACTTCCAGAGGAAATAAATGAAAGACTGTGAT
CTCACTAGTGGTAGGAAGTGACCGTGTGTTTCAACTTAATATCATAAAGCCCAAGCCAGTGAAA
TTTATCTTGATTGAGAGAAGCTGCTTGAAAGTTGTCTAATTCAGCCTTGTCAGTGGTTTAATCA
CAAGGTGATCTGAGGTGATACAGTTAAAGTGGTTAACCATGGAAGATGATCACAAGCTGCCCTC
TGGATCTTCTCCATCGGAGCGCCCGCCTGGTGATAAAGTCCTGTTGACTTCTGTGGCCTCCTGC
TTACTCATGTCCCATTTCACACCCTGTGCTCCAGCTCAATTACTTGCTGTTTACAGATTGTTCA
TGTGGTGTTGCTTCCTAACTGATTTGCCGACAAACTGAACCTGGTCTTCTTTCTCTCCTTCATG
TCTGTCTGACCAACACCAGCTTTCATCTTTCAAAAATCAGTTTCTTTTACTTCCTCCAAAAACC
ATTTACATGACATTGGCCATGTCTTCTAGGAGTCTTCTAACAGTATTATAATGGGTTTAATAGT
GCACTCCACAAAAGGTAATGTCTGTATGGAACCTGTACATACATATGGCTTCATTTCGAAGAAG
GACATTTTCGGGTGAATGTAAGGACCTATGGATGACATCGTCCTGGATTAGAGTGGGCCCTAAC
CCCACTGACAAGTTCTTTTAAGAGAAAAGAAGGGGAAACAGATGCAGAGGAGGTCTTGGGAGGA
TAGAGGCAAAGGTAAACACCATGTCTTGAAATTCCCTGGACCACAAAAGCTAGAAGAGGGTCAT
GGAACACTTTCTATCAGAGCCTCTGGAAGGAACCGACCCTGCTGCTCTTTTTATTTCAGACTTC
TATTATGATGACAAAATAAGTTTCTATTCTAAGCCACCTAGTTTGTGGTAAATTGTTACAGTCA
ACCTAAGCATTGAATACAACTGTCTCACAAAACAGCCTGATATATCACTACACTTTTCTATCTT
CTCTGATACTCATGAGAAGTCACAATGTCTAGATGCTGCAGAGACTGAGAACTTGAGAGAAGAG
CCATGTCATATTTCTTCAGTGTCCCCAAGCAAGGATCTTGCATAGTTCCTAAATATGGAGATCT
GCCAAGTGAGTAATTGGATGGAGTGCGTGAATCCTGATAAATGAGATAGATGGAGTAATCCTGC
TGTGGCCTTTTCAGGTAACATGGTTCACACTCTGCATGTTGAAGATTAAGTGGGCAAAAAAATC
TTTAACTCTAGCCTAGGGGTCAGTAGCCCAGTTGGTGGGCCAATTCACCTCCCTCTGTACTTAC
ACAATCTGTGAATTAAGAATGATTTTTAAAACGTTGGGGGAATAAAGGATAACATGTTTTTCTA
AAAGTTGAAAAATATTTTGTAGCATGAGAAAAGTATATGAAATTCAAACTCCAGTGTTCATAAA
TAAAAGTTTATTGAACATA

hide sequence

RefSeq Acc Id:

XM_039078771 ⟹ XP_038934699

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	97,524,941 - 97,649,765 (-)	NCBI
mRatBN7.2	7	95,633,876 - 95,760,579 (-)	NCBI

RefSeq Acc Id:

XM_039078773 ⟹ XP_038934701

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	97,524,941 - 97,649,765 (-)	NCBI
mRatBN7.2	7	95,633,876 - 95,760,579 (-)	NCBI

RefSeq Acc Id:

XM_039078774 ⟹ XP_038934702

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	97,524,941 - 97,586,673 (-)	NCBI
mRatBN7.2	7	95,633,876 - 95,697,508 (-)	NCBI

RefSeq Acc Id:

XM_039078775 ⟹ XP_038934703

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	97,524,941 - 97,649,846 (-)	NCBI
mRatBN7.2	7	95,633,876 - 95,760,573 (-)	NCBI

RefSeq Acc Id:

XM_063263248 ⟹ XP_063119318

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	97,524,941 - 97,586,673 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001119739	(Get FASTA)	NCBI Sequence Viewer
	XP_006241695	(Get FASTA)	NCBI Sequence Viewer
	XP_006241697	(Get FASTA)	NCBI Sequence Viewer
	XP_008763723	(Get FASTA)	NCBI Sequence Viewer
	XP_017450240	(Get FASTA)	NCBI Sequence Viewer
	XP_038934699	(Get FASTA)	NCBI Sequence Viewer
	XP_038934701	(Get FASTA)	NCBI Sequence Viewer
	XP_038934702	(Get FASTA)	NCBI Sequence Viewer
	XP_038934703	(Get FASTA)	NCBI Sequence Viewer
	XP_063119318	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI66469	(Get FASTA)	NCBI Sequence Viewer
	EDM16171	(Get FASTA)	NCBI Sequence Viewer
	EDM16172	(Get FASTA)	NCBI Sequence Viewer
	EDM16173	(Get FASTA)	NCBI Sequence Viewer
	EDM16174	(Get FASTA)	NCBI Sequence Viewer
	EDM16175	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000070286
	ENSRNOP00000070286.3
	ENSRNOP00000073189
	ENSRNOP00000073189.3

RefSeq Acc Id:

NP_001119739 ⟸ NM_001126267

- UniProtKB:

B2GUZ9 (UniProtKB/TrEMBL), A0A0G2K4V6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGNLLKVLTCTDLEQGPNFFLDFENAQPTESEKEIYNQVNVVLKDAEGILEDLQSYRGAGHEIR
EAIQHPADEKLQEKAWGAVVPLVGKLKKFYEFSQRLEAALRGLLGALTSTPYSPTQHLEREQAL
AKQFAEILHFTLRFDELKMTNPAIQNDFSYYRRTLSRMRINNVPAEGENEVNNELANRMSLFYA
EATPMLKTLSDATTKFVSENKNLPIENTTDCLSTMASVCRVMLETPEYRSRFTNEETVSFCLRV
MVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKDQPPNSVEGLLNALRYTTKHLNDETTSKQIR
SMLQ

hide sequence

RefSeq Acc Id:	XP_006241695 ⟸ XM_006241633
- Peptide Label:	isoform X2
- UniProtKB:	B2GUZ9 (UniProtKB/TrEMBL), A0A0G2K4V6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGNLLKVLTCTDLEQGPNFFLDFENAQPTESEKEIYNQVNVVLKDAEGILEDLQSYRGAGHEIR EAIQHPADEKLQEKAWGAVVPLVGKLKKFYEFSQRLEAALRGLLGALTSTPYSPTQHLEREQAL AKQFAEILHFTLRFDELKMTNPAIQNDFSYYRRTLSRMRINNVPAEGENEVNNELANRMSLFYA EATPMLKTLSDATTKFVSENKNLPIENTTDCLSTMASVCRVMLETPEYRSRFTNEETVSFCLRV MVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKDQPPNSVEGLLNALRYTTKHLNDETTSKQIR SMLQ hide sequence

RefSeq Acc Id:	XP_006241697 ⟸ XM_006241635
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JXI6 (UniProtKB/TrEMBL), A6HRP7 (UniProtKB/TrEMBL), A0A0G2K4V6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGNLIKVLTRDIDHNAAHFFLDFENAQPTESEKEIYNQVNVVLKDAEGILEDLQSYRGAGHEIR EAIQHPADEKLQEKAWGAVVPLVGKLKKFYEFSQRLEAALRGLLGALTSTPYSPTQHLEREQAL AKQFAEILHFTLRFDELKMTNPAIQNDFSYYRRTLSRMRINNVPAEGENEVNNELANRMSLFYA EATPMLKTLSDATTKFVSENKNLPIENTTDCLSTMASVCRVMLETPEYRSRFTNEETVSFCLRV MVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKDQPPNSVEGLLNALRYTTKHLNDETTSKQIR SMLQ hide sequence

RefSeq Acc Id:	XP_008763723 ⟸ XM_008765501
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JXI6 (UniProtKB/TrEMBL), A6HRP7 (UniProtKB/TrEMBL), A0A0G2K4V6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGNLIKVLTRDIDHNAAHFFLDFENAQPTESEKEIYNQVNVVLKDAEGILEDLQSYRGAGHEIR EAIQHPADEKLQEKAWGAVVPLVGKLKKFYEFSQRLEAALRGLLGALTSTPYSPTQHLEREQAL AKQFAEILHFTLRFDELKMTNPAIQNDFSYYRRTLSRMRINNVPAEGENEVNNELANRMSLFYA EATPMLKTLSDATTKFVSENKNLPIENTTDCLSTMASVCRVMLETPEYRSRFTNEETVSFCLRV MVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKDQPPNSVEGLLNALRYTTKHLNDETTSKQIR SMLQ hide sequence

RefSeq Acc Id:	XP_017450240 ⟸ XM_017594751
- Peptide Label:	isoform X2
- UniProtKB:	B2GUZ9 (UniProtKB/TrEMBL), A0A0G2K4V6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGNLLKVLTCTDLEQGPNFFLDFENAQPTESEKEIYNQVNVVLKDAEGILEDLQSYRGAGHEIR EAIQHPADEKLQEKAWGAVVPLVGKLKKFYEFSQRLEAALRGLLGALTSTPYSPTQHLEREQAL AKQFAEILHFTLRFDELKMTNPAIQNDFSYYRRTLSRMRINNVPAEGENEVNNELANRMSLFYA EATPMLKTLSDATTKFVSENKNLPIENTTDCLSTMASVCRVMLETPEYRSRFTNEETVSFCLRV MVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKDQPPNSVEGLLNALRYTTKHLNDETTSKQIR SMLQ hide sequence

Ensembl Acc Id:

ENSRNOP00000070286 ⟸ ENSRNOT00000090784

Ensembl Acc Id:

ENSRNOP00000073189 ⟸ ENSRNOT00000078116

RefSeq Acc Id:	XP_038934701 ⟸ XM_039078773
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038934699 ⟸ XM_039078771
- Peptide Label:	isoform X2
- UniProtKB:	B2GUZ9 (UniProtKB/TrEMBL), A0A0G2K4V6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038934703 ⟸ XM_039078775
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038934702 ⟸ XM_039078774
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063119318 ⟸ XM_063263248
- Peptide Label:	isoform X2
- UniProtKB:	B2GUZ9 (UniProtKB/TrEMBL), A0A0G2K4V6 (UniProtKB/TrEMBL)

Protein Domains

CYRIA/CYRIB Rac1 binding

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B2GUZ9-F1-model_v2	AlphaFold	B2GUZ9	1-324	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307697	AgrOrtholog
BioCyc Gene	G2FUF-33149	BioCyc
Ensembl Genes	ENSRNOG00000061246	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000078116	ENTREZGENE
	ENSRNOT00000078116.3	UniProtKB/TrEMBL
	ENSRNOT00000090784	ENTREZGENE
	ENSRNOT00000090784.3	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:9036548	IMAGE-MGC_LOAD
InterPro	DUF1394	UniProtKB/TrEMBL
	FAM49	UniProtKB/TrEMBL
KEGG Report	rno:299909	UniProtKB/TrEMBL
MGC_CLONE	MGC:187849	IMAGE-MGC_LOAD
NCBI Gene	299909	ENTREZGENE
PANTHER	PTHR12422	UniProtKB/TrEMBL
Pfam	DUF1394	UniProtKB/TrEMBL
PhenoGen	Cyrib	PhenoGen
RatGTEx	ENSRNOG00000061246	RatGTEx
UniProt	A0A0G2JXI6	ENTREZGENE, UniProtKB/TrEMBL
	A0A0G2K4V6	ENTREZGENE, UniProtKB/TrEMBL
	A6HRP7	ENTREZGENE, UniProtKB/TrEMBL
	B2GUZ9	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-12-06	Cyrib	CYFIP related Rac1 interactor B	Fam49b	family with sequence similarity 49, member B	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-07	Fam49b	family with sequence similarity 49, member B	RGD1307697_predicted	similar to 0910001A06Rik protein (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	RGD1307697_predicted	similar to 0910001A06Rik protein (predicted)	LOC299909_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC299909_predicted	similar to 0910001A06Rik protein (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD