Kifc3 (kinesin family member C3) - Rat Genome Database

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Pathways
Gene: Kifc3 (kinesin family member C3) Rattus norvegicus
Analyze
Symbol: Kifc3
Name: kinesin family member C3
RGD ID: 1307693
Description: Predicted to enable identical protein binding activity and microtubule binding activity. Predicted to be involved in epithelial cell-cell adhesion; microtubule-based process; and zonula adherens maintenance. Predicted to act upstream of or within Golgi organization. Predicted to be located in Golgi apparatus; centrosome; and zonula adherens. Predicted to be part of kinesin complex. Predicted to be active in microtubule cytoskeleton. Orthologous to human KIFC3 (kinesin family member C3); PARTICIPATES IN E-cadherin signaling pathway; INTERACTS WITH 17beta-estradiol; 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: kinesin-like protein KIFC3; KRP4; LOC307644; MGC156699
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8199,831,159 - 9,926,405 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl199,831,159 - 9,926,405 (+)EnsemblGRCr8
mRatBN7.2199,825,114 - 9,920,371 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl199,886,693 - 9,920,451 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx199,788,799 - 9,884,111 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01910,555,624 - 10,650,952 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0199,842,003 - 9,937,790 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01910,305,405 - 10,339,186 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1910,320,604 - 10,339,178 (+)Ensemblrn6Rnor6.0
Rnor_5.01910,226,739 - 10,319,289 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41910,335,789 - 10,354,364 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera199,789,874 - 9,808,283 (+)NCBICelera
RGSC_v3.11910,325,554 - 10,359,187 (+)NCBI
Cytogenetic Map19p13NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2,6-dinitrotoluene  (EXP)
2-hydroxypropanoic acid  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
acetamide  (EXP)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
Aflatoxin B2 alpha  (ISO)
ammonium chloride  (EXP)
amphetamine  (EXP)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
Benzo[k]fluoranthene  (ISO)
bisphenol A  (EXP,ISO)
C60 fullerene  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (EXP)
caffeine  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (ISO)
cisplatin  (ISO)
clothianidin  (ISO)
cobalt dichloride  (EXP)
cyclosporin A  (ISO)
Dibutyl phosphate  (ISO)
diquat  (ISO)
diuron  (EXP)
dorsomorphin  (ISO)
ethanol  (EXP)
ethylparaben  (ISO)
furan  (EXP)
genistein  (EXP)
gentamycin  (EXP)
GSK-J4  (ISO)
indole-3-methanol  (EXP)
inulin  (ISO)
methimazole  (EXP)
methylparaben  (ISO)
methylphenidate  (ISO)
N-nitrosodiethylamine  (EXP)
p-toluidine  (EXP)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenylmercury acetate  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
rac-lactic acid  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
succimer  (ISO)
sulfadimethoxine  (EXP)
sunitinib  (ISO)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (ISO)
triclosan  (ISO)
triphenyl phosphate  (ISO)
Triptolide  (ISO)
triptonide  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8688559   PMID:12135985   PMID:12477932   PMID:19041755   PMID:19056867   PMID:34800366  


Genomics

Comparative Map Data
Kifc3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8199,831,159 - 9,926,405 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl199,831,159 - 9,926,405 (+)EnsemblGRCr8
mRatBN7.2199,825,114 - 9,920,371 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl199,886,693 - 9,920,451 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx199,788,799 - 9,884,111 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01910,555,624 - 10,650,952 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0199,842,003 - 9,937,790 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01910,305,405 - 10,339,186 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1910,320,604 - 10,339,178 (+)Ensemblrn6Rnor6.0
Rnor_5.01910,226,739 - 10,319,289 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41910,335,789 - 10,354,364 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera199,789,874 - 9,808,283 (+)NCBICelera
RGSC_v3.11910,325,554 - 10,359,187 (+)NCBI
Cytogenetic Map19p13NCBI
KIFC3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381657,758,217 - 57,862,858 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1657,755,668 - 57,863,053 (-)Ensemblhg38GRCh38
GRCh371657,792,129 - 57,837,165 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361656,349,630 - 56,393,940 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341656,349,631 - 56,393,909NCBI
Celera1642,289,388 - 42,333,720 (-)NCBICelera
Cytogenetic Map16q21NCBI
HuRef1643,659,003 - 43,703,719 (-)NCBIHuRef
CHM1_11659,198,854 - 59,243,165 (-)NCBICHM1_1
T2T-CHM13v2.01663,553,374 - 63,658,232 (-)NCBIT2T-CHM13v2.0
Kifc3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39895,826,456 - 95,929,454 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl895,826,456 - 95,929,440 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38895,099,828 - 95,202,826 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl895,099,828 - 95,202,812 (-)Ensemblmm10GRCm38
MGSCv37897,623,728 - 97,666,440 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36897,988,957 - 98,031,669 (-)NCBIMGSCv36mm8
Celera899,425,882 - 99,457,735 (-)NCBICelera
Cytogenetic Map8C5NCBI
cM Map847.12NCBI
Kifc3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543315,366,106 - 15,428,660 (-)Ensembl
ChiLan1.0NW_00495543315,365,944 - 15,428,502 (-)NCBIChiLan1.0ChiLan1.0
KIFC3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21867,229,222 - 67,274,283 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11673,150,139 - 73,194,887 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01638,034,983 - 38,080,022 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11657,166,395 - 57,254,899 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1657,166,395 - 57,254,899 (-)EnsemblpanPan2panpan1.1
KIFC3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1258,700,195 - 58,734,012 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl258,663,797 - 58,733,697 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha255,325,755 - 55,363,783 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0259,234,583 - 59,272,364 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl259,204,242 - 59,272,359 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1256,066,227 - 56,104,092 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0257,073,706 - 57,111,574 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0257,966,764 - 58,004,895 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Kifc3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934949,795,650 - 49,830,571 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364759,757,147 - 9,831,563 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364759,758,503 - 9,821,629 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIFC3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl619,659,616 - 19,696,073 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1619,659,987 - 19,696,104 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2617,719,961 - 17,750,864 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KIFC3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1543,689,079 - 43,735,014 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl543,687,613 - 43,730,268 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604732,384,822 - 32,490,502 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kifc3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474628,330,539 - 28,359,649 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474628,302,673 - 28,359,649 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Kifc3
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1171,974,346 - 2,071,545 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Kifc3
1006 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:93
Count of miRNA genes:66
Interacting mature miRNAs:84
Transcripts:ENSRNOT00000066032
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1549847Bss8Bone structure and strength QTL 84lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)19131969901Rat
8552935Pigfal10Plasma insulin-like growth factor 1 level QTL 105.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)19799775052997750Rat
7411590Foco7Food consumption QTL 76.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)19124694445Rat
9590090Insglur8Insulin/glucose ratio QTL 810.810.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)19799775052997750Rat
9590250Scort11Serum corticosterone level QTL 1123.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19799775052997750Rat
9590298Uminl5Urine mineral level QTL 53.590.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)19799775052997750Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19219431774246245Rat
1358200Insglur2Insulin/glucose ratio QTL 24.1blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)19574806450748064Rat
10054132Srcrt9Stress Responsive Cort QTL 92.870.0017blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19127361636Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)193628974246245Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19219431774246245Rat

Markers in Region
AI325457  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2199,920,191 - 9,920,287 (+)MAPPERmRatBN7.2
Rnor_6.01910,339,004 - 10,339,099NCBIRnor6.0
Rnor_5.01910,319,107 - 10,319,202UniSTSRnor5.0
RGSC_v3.41910,354,185 - 10,354,280UniSTSRGSC3.4
Celera199,808,104 - 9,808,199UniSTS
Cytogenetic Map19p13UniSTS
RH130442  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2199,920,087 - 9,920,290 (+)MAPPERmRatBN7.2
Rnor_6.01910,338,900 - 10,339,102NCBIRnor6.0
Rnor_5.01910,319,003 - 10,319,205UniSTSRnor5.0
RGSC_v3.41910,354,081 - 10,354,283UniSTSRGSC3.4
Celera199,808,000 - 9,808,202UniSTS
RH 3.4 Map1972.41UniSTS
Cytogenetic Map19p13UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 161 91 90 59 91 59 6 355 191 11 140 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001103352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001401191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008772289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008772291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008772292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008772293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005496646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005496647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC106681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF035953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AM180764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC128748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000066032   ⟹   ENSRNOP00000058969
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl199,892,690 - 9,926,404 (+)Ensembl
mRatBN7.2 Ensembl199,886,693 - 9,920,361 (+)Ensembl
Rnor_6.0 Ensembl1910,320,604 - 10,339,178 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000093890   ⟹   ENSRNOP00000085654
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl199,914,370 - 9,925,927 (+)Ensembl
mRatBN7.2 Ensembl199,906,144 - 9,920,370 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000095742   ⟹   ENSRNOP00000092397
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl199,892,690 - 9,926,404 (+)Ensembl
mRatBN7.2 Ensembl199,886,693 - 9,920,361 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000104498   ⟹   ENSRNOP00000080196
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl199,831,159 - 9,926,405 (+)Ensembl
mRatBN7.2 Ensembl199,886,705 - 9,920,451 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000107028   ⟹   ENSRNOP00000094247
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl199,831,159 - 9,926,405 (+)Ensembl
mRatBN7.2 Ensembl199,908,334 - 9,920,451 (+)Ensembl
RefSeq Acc Id: NM_001103352   ⟹   NP_001096822
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,907,826 - 9,926,405 (+)NCBI
mRatBN7.2199,901,787 - 9,920,371 (+)NCBI
Rnor_6.01910,320,604 - 10,339,183 (+)NCBI
Rnor_5.01910,226,739 - 10,319,289 (+)NCBI
RGSC_v3.41910,335,789 - 10,354,364 (+)RGD
Celera199,789,874 - 9,808,283 (+)RGD
Sequence:
RefSeq Acc Id: NM_001401191   ⟹   NP_001388120
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,159 - 9,926,405 (+)NCBI
mRatBN7.2199,825,114 - 9,920,371 (+)NCBI
RefSeq Acc Id: XM_008772292   ⟹   XP_008770514
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,907,654 - 9,926,405 (+)NCBI
mRatBN7.2199,901,658 - 9,920,371 (+)NCBI
Rnor_6.01910,320,541 - 10,338,325 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008772293   ⟹   XP_008770515
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,914,619 - 9,926,405 (+)NCBI
mRatBN7.2199,908,496 - 9,920,371 (+)NCBI
Rnor_6.01910,327,255 - 10,338,325 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017601265   ⟹   XP_017456754
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,253 - 9,926,405 (+)NCBI
mRatBN7.2199,825,208 - 9,920,371 (+)NCBI
Rnor_6.01910,309,817 - 10,338,325 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017601266   ⟹   XP_017456755
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,253 - 9,925,929 (+)NCBI
mRatBN7.2199,825,208 - 9,920,371 (+)NCBI
Rnor_6.01910,309,817 - 10,339,186 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017601269   ⟹   XP_017456758
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,253 - 9,925,929 (+)NCBI
mRatBN7.2199,825,208 - 9,920,371 (+)NCBI
Rnor_6.01910,309,817 - 10,339,183 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017601270   ⟹   XP_017456759
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,253 - 9,926,405 (+)NCBI
mRatBN7.2199,825,208 - 9,920,371 (+)NCBI
Rnor_6.01910,309,817 - 10,339,186 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039097698   ⟹   XP_038953626
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,253 - 9,926,405 (+)NCBI
mRatBN7.2199,825,208 - 9,920,371 (+)NCBI
RefSeq Acc Id: XM_039097699   ⟹   XP_038953627
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,253 - 9,926,405 (+)NCBI
mRatBN7.2199,825,208 - 9,920,371 (+)NCBI
RefSeq Acc Id: XM_039097700   ⟹   XP_038953628
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,897,451 - 9,926,405 (+)NCBI
mRatBN7.2199,891,414 - 9,920,371 (+)NCBI
RefSeq Acc Id: XM_039097701   ⟹   XP_038953629
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,892,727 - 9,926,405 (+)NCBI
mRatBN7.2199,891,254 - 9,920,371 (+)NCBI
RefSeq Acc Id: XM_063277982   ⟹   XP_063134052
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,253 - 9,926,405 (+)NCBI
RefSeq Acc Id: XM_063277983   ⟹   XP_063134053
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,897,451 - 9,926,405 (+)NCBI
RefSeq Acc Id: XM_063277984   ⟹   XP_063134054
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,914,619 - 9,926,405 (+)NCBI
RefSeq Acc Id: XR_005496646
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,253 - 9,925,929 (+)NCBI
mRatBN7.2199,825,208 - 9,920,371 (+)NCBI
RefSeq Acc Id: XR_005496647
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,253 - 9,925,929 (+)NCBI
mRatBN7.2199,825,208 - 9,920,371 (+)NCBI
RefSeq Acc Id: NP_001096822   ⟸   NM_001103352
- Peptide Label: isoform 2
- UniProtKB: A1A5P4 (UniProtKB/TrEMBL),   A0A8I6A4I8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008770514   ⟸   XM_008772292
- Peptide Label: isoform X9
- UniProtKB: A0A8I6AKJ1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008770515   ⟸   XM_008772293
- Peptide Label: isoform X10
- UniProtKB: A0A8I6AKJ1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017456755   ⟸   XM_017601266
- Peptide Label: isoform X3
- UniProtKB: A0A8I6ADV7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017456759   ⟸   XM_017601270
- Peptide Label: isoform X7
- UniProtKB: F7EXA8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017456758   ⟸   XM_017601269
- Peptide Label: isoform X5
- UniProtKB: A0A8I6ADV7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017456754   ⟸   XM_017601265
- Peptide Label: isoform X2
- UniProtKB: A0A8I6ADV7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000058969   ⟸   ENSRNOT00000066032
RefSeq Acc Id: XP_038953626   ⟸   XM_039097698
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ADV7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038953627   ⟸   XM_039097699
- Peptide Label: isoform X6
- UniProtKB: F7EXA8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038953629   ⟸   XM_039097701
- Peptide Label: isoform X8
- UniProtKB: A0A8I6AKJ1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038953628   ⟸   XM_039097700
- Peptide Label: isoform X8
- UniProtKB: A0A8I6AKJ1 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000094247   ⟸   ENSRNOT00000107028
Ensembl Acc Id: ENSRNOP00000085654   ⟸   ENSRNOT00000093890
Ensembl Acc Id: ENSRNOP00000092397   ⟸   ENSRNOT00000095742
Ensembl Acc Id: ENSRNOP00000080196   ⟸   ENSRNOT00000104498
RefSeq Acc Id: NP_001388120   ⟸   NM_001401191
- Peptide Label: isoform 1
- UniProtKB: A0A8I6ADV7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063134052   ⟸   XM_063277982
- Peptide Label: isoform X4
- UniProtKB: A0A8I6ADV7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063134053   ⟸   XM_063277983
- Peptide Label: isoform X9
- UniProtKB: A0A8I6AKJ1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063134054   ⟸   XM_063277984
- Peptide Label: isoform X11
- UniProtKB: A0A8I6A4I8 (UniProtKB/TrEMBL)
Protein Domains
Kinesin motor

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A1A5P4-F1-model_v2 AlphaFold A1A5P4 1-753 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307693 AgrOrtholog
BioCyc Gene G2FUF-6525 BioCyc
Ensembl Genes ENSRNOG00000014087 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000066032.4 UniProtKB/TrEMBL
  ENSRNOT00000093890 ENTREZGENE
  ENSRNOT00000093890.2 UniProtKB/TrEMBL
  ENSRNOT00000095742 ENTREZGENE
  ENSRNOT00000095742.2 UniProtKB/TrEMBL
  ENSRNOT00000104498 ENTREZGENE
  ENSRNOT00000104498.2 UniProtKB/TrEMBL
  ENSRNOT00000107028 ENTREZGENE
  ENSRNOT00000107028.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.1490 UniProtKB/TrEMBL
  3.40.850.10 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7099524 IMAGE-MGC_LOAD
InterPro Kinesin-like_fam UniProtKB/TrEMBL
  Kinesin_motor_CS UniProtKB/TrEMBL
  Kinesin_motor_dom UniProtKB/TrEMBL
  Kinesin_motor_dom_sf UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
MGC_CLONE MGC:156699 IMAGE-MGC_LOAD
NCBI Gene 307644 ENTREZGENE
PANTHER KINESIN-LIKE PROTEIN KLP-3 UniProtKB/TrEMBL
  PTHR47972:SF5 UniProtKB/TrEMBL
Pfam Kinesin UniProtKB/TrEMBL
PhenoGen Kifc3 PhenoGen
PRINTS KINESINHEAVY UniProtKB/TrEMBL
PROSITE KINESIN_MOTOR_DOMAIN1 UniProtKB/TrEMBL
  KINESIN_MOTOR_DOMAIN2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000014087 RatGTEx
SMART KISc UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A8I5ZSI9_RAT UniProtKB/TrEMBL
  A0A8I6A4I8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ADV7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AKJ1 ENTREZGENE, UniProtKB/TrEMBL
  A1A5P4 ENTREZGENE, UniProtKB/TrEMBL
  F7EXA8 ENTREZGENE, UniProtKB/TrEMBL
  Q2P9S2_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 Kifc3  kinesin family member C3  Kifc3_predicted  kinesin family member C3 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Kifc3_predicted  kinesin family member C3 (predicted)      Symbol and Name status set to approved 70820 APPROVED