Nek3 (NIMA-related kinase 3) - Rat Genome Database

Name: Nek3
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Nek3 (NIMA-related kinase 3) Rattus norvegicus

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Symbol:

Nek3

Name:

NIMA-related kinase 3

RGD ID:

1307419

Description:

Predicted to enable ATP binding activity and protein serine/threonine kinase activity. Predicted to be involved in several processes, including neuron projection morphogenesis; protein phosphorylation; and regulation of tubulin deacetylation. Orthologous to human NEK3 (NIMA related kinase 3); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; diazinon.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC306576; NIMA (never in mitosis gene a)-related expressed kinase 3; NIMA (never in mitosis gene a)-related kinase 3; serine/threonine-protein kinase Nek3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NEK3 (NIMA related kinase 3)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Nek3 (NIMA (never in mitosis gene a)-related expressed kinase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Nek3 (NIMA related kinase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NEK3 (NIMA related kinase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NEK3 (NIMA related kinase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Nek3 (NIMA related kinase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NEK3 (NIMA related kinase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	NEK3 (NIMA related kinase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Nek3 (NIMA related kinase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	NEK3 (NIMA related kinase 3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Nek3 (NIMA (never in mitosis gene a)-related expressed kinase 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	nek3 (NIMA related kinase 3)	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	nekl-2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid)
Xenopus tropicalis (tropical clawed frog):	nek3	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	76,569,465 - 76,594,921 (+)	NCBI		GRCr8
mRatBN7.2	16	69,867,020 - 69,892,477 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	69,867,047 - 69,892,508 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	16	74,781,371 - 74,806,567 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	74,785,281 - 74,806,149 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	74,412,402 - 74,437,059 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	74,524,839 - 74,547,785 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	74,525,103 - 74,569,327 (+)	NCBI
Celera	16	67,751,672 - 67,777,870 (+)	NCBI		Celera
Cytogenetic Map	16	q12.5	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

chromosome 13q14 deletion syndrome (ISO)

hereditary breast ovarian cancer syndrome (ISO)

intellectual disability (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,1-dichloroethene (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4-hydroxynon-2-enal (ISO)

acrolein (ISO)

aflatoxin B1 (ISO)

aristolochic acid A (ISO)

atrazine (ISO)

bisphenol A (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

cadmium sulfate (ISO)

caffeine (ISO)

chlordecone (ISO)

chromium(6+) (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

DDE (ISO)

diazinon (EXP)

dieldrin (EXP)

doxorubicin (ISO)

flutamide (EXP)

formaldehyde (ISO)

FR900359 (ISO)

gentamycin (EXP)

hydroxyurea (ISO)

methoxyacetic acid (EXP)

nickel dichloride (EXP)

ozone (ISO)

p-anisidine (ISO)

paracetamol (EXP,ISO)

perfluorohexanesulfonic acid (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

silver atom (ISO)

silver(0) (ISO)

succimer (ISO)

testosterone (EXP)

tetrachloromethane (EXP)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

establishment of cell polarity (ISO)

neuron projection morphogenesis (ISO)

protein phosphorylation (ISO)

regulation of tubulin deacetylation (ISO)

Molecular Function

ATP binding (IEA)

protein binding (ISO)

protein kinase activity (IEA)

protein serine/threonine kinase activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:15618286	PMID:19509051

Genomics

Comparative Map Data

Nek3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	76,569,465 - 76,594,921 (+)	NCBI		GRCr8
mRatBN7.2	16	69,867,020 - 69,892,477 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	69,867,047 - 69,892,508 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	16	74,781,371 - 74,806,567 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	74,785,281 - 74,806,149 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	74,412,402 - 74,437,059 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	74,524,839 - 74,547,785 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	74,525,103 - 74,569,327 (+)	NCBI
Celera	16	67,751,672 - 67,777,870 (+)	NCBI		Celera
Cytogenetic Map	16	q12.5	NCBI

NEK3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	13	52,132,647 - 52,159,860 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	13	52,132,639 - 52,159,597 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	13	52,706,783 - 52,733,995 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	13	51,604,780 - 51,631,997 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	13	51,604,779 - 51,631,511	NCBI
Celera	13	33,755,426 - 33,782,643 (-)	NCBI		Celera
Cytogenetic Map	13	q14.3	NCBI
HuRef	13	33,494,915 - 33,522,031 (-)	NCBI		HuRef
CHM1_1	13	52,674,859 - 52,702,079 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	13	51,347,480 - 51,374,691 (-)	NCBI		T2T-CHM13v2.0

Nek3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	22,618,299 - 22,657,009 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	22,618,299 - 22,656,451 (-)	Ensembl		GRCm39 Ensembl
GRCm38	8	22,128,283 - 22,166,997 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	22,128,283 - 22,166,435 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	23,238,755 - 23,276,907 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	23,593,828 - 23,631,947 (-)	NCBI		MGSCv36	mm8
Celera	8	23,623,168 - 23,659,067 (-)	NCBI		Celera
Cytogenetic Map	8	A2	NCBI
cM Map	8	11.07	NCBI

Nek3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955431	5,378,896 - 5,412,221 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955431	5,382,992 - 5,412,206 (-)	NCBI	ChiLan1.0	ChiLan1.0

NEK3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	14	53,564,420 - 53,592,624 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	13	52,208,697 - 52,236,903 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	13	33,261,186 - 33,288,316 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	13	52,003,518 - 52,030,538 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	13	52,003,518 - 52,030,212 (-)	Ensembl	panpan1.1		panPan2

NEK3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	25	118,558 - 130,901 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	25	237,734 - 250,302 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	25	221,349 - 233,911 (-)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	25	102,210 - 114,767 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	25	116,905 - 129,452 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	25	184,724 - 197,292 (-)	NCBI		UU_Cfam_GSD_1.0

Nek3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	161,356,381 - 161,383,259 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936565	4,840,894 - 4,863,301 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936565	4,840,416 - 4,863,349 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NEK3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	11	15,772,844 - 15,798,420 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	11	15,772,578 - 15,798,424 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	11	16,097,410 - 16,123,551 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NEK3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	3	30,018,641 - 30,048,787 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	3	30,018,635 - 30,045,216 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666057	13,765,557 - 13,795,721 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Nek3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624748	1,944,152 - 1,977,187 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624748	1,939,806 - 1,976,484 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Nek3
593 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	157
Count of miRNA genes:	91
Interacting mature miRNAs:	97
Transcripts:	ENSRNOT00000017106, ENSRNOT00000064316
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2300163	Bmd64	Bone mineral density QTL 64	5.3	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	16	37752156	82752156	Rat
1600378	Arunc4	Aerobic running capacity QTL 4		0.03	exercise endurance trait (VT:0002332)	maximum distance run on treadmill (CMO:0001406)	16	380245	80345693	Rat
70215	Niddm29	Non-insulin dependent diabetes mellitus QTL 29	3.54		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	16	19004435	75226532	Rat
1578768	Stresp22	Stress response QTL 22	2.8		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	16	35288870	80288870	Rat
7205510	Activ5	Activity QTL 5	3.78	0.00028	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	16	42396345	84729064	Rat
631525	Pia14	Pristane induced arthritis QTL 14	4.4		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	16	55711087	83402471	Rat
1298527	Arunc2	Aerobic running capacity QTL 2	2.9		exercise endurance trait (VT:0002332)	maximum distance run on treadmill (CMO:0001406)	16	68532716	75029966	Rat
7411648	Foco22	Food consumption QTL 22	15	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	16	52726464	84729064	Rat
6903294	Stl30	Serum triglyceride level QTL 30	2.6	0.0013	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	16	25152793	70152793	Rat
2293690	Bss45	Bone structure and strength QTL 45	5.13	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	16	37752156	82752156	Rat
8694364	Abfw7	Abdominal fat weight QTL 7	12.22	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	16	52726464	84729064	Rat
8694429	Bw164	Body weight QTL 164	5	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	16	52726464	84729064	Rat
70205	Gcr3	Gastric cancer resistance QTL 3	2.3		stomach morphology trait (VT:0000470)	stomach tumor diameter (CMO:0001889)	16	17696791	82635055	Rat

Markers in Region

RH140165

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	69,892,161 - 69,892,366 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	74,806,252 - 74,806,456	NCBI	Rnor6.0
Rnor_5.0	16	74,436,744 - 74,436,948	UniSTS	Rnor5.0
RGSC_v3.4	16	74,547,470 - 74,547,674	UniSTS	RGSC3.4
Celera	16	67,777,555 - 67,777,759	UniSTS
RH 3.4 Map	16	691.1	UniSTS
Cytogenetic Map	16	q12.5	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001427168	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001065115	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222274	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222275	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222276	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222277	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222278	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253359	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253360	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253361	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253363	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095233	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095234	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275457	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275458	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275459	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000017106 ⟹ ENSRNOP00000017107

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	16	69,867,047 - 69,892,508 (+)	Ensembl
Rnor_6.0 Ensembl	16	74,785,281 - 74,806,149 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000064316 ⟹ ENSRNOP00000061987

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	16	69,867,047 - 69,892,508 (+)	Ensembl
Rnor_6.0 Ensembl	16	74,785,281 - 74,806,149 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000090646 ⟹ ENSRNOP00000073909

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	16	69,867,047 - 69,892,508 (+)	Ensembl
Rnor_6.0 Ensembl	16	74,785,281 - 74,806,149 (+)	Ensembl

RefSeq Acc Id:

NM_001427168 ⟹ NP_001414097

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	76,569,496 - 76,594,921 (+)	NCBI

RefSeq Acc Id:

XM_006253359 ⟹ XP_006253421

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	76,569,466 - 76,594,877 (+)	NCBI
mRatBN7.2	16	69,867,020 - 69,892,477 (+)	NCBI
Rnor_6.0	16	74,781,371 - 74,806,567 (+)	NCBI
Rnor_5.0	16	74,412,402 - 74,437,059 (+)	NCBI

Sequence:

show sequence

CCGCCCATGCCCCGCCCAGCGCCCGGCCAGGCGGCTGGCGAAGAAGCGACGCGCGCCGCTGGGA
GGTGGGTGAGTTTGGGCGAGCCAGCAGTGACTAGGAGTGGAGCCCAGCTGCGCTGCCGACCATG
GACAACTACACAGTCCTGAGAGTGATAGGCCACGGCTCCTTCGGCAGCGTTCTTTTGGCTACAG
AGAAAAGCAGCAATCAGACATTCGCCATGAAGGAAATAAGACTGCTCAAGTCTTTCTCTGACGT
ACAGAATTGTAGGAAAGAGGCTGTTCTGCTGGCCAAAATGAAACACCCCAATATTGTTGCCTTT
AAGGAGTCATTCGAAGCTGAAGGGCATCTGTATATTGTGATGGAGTATTGTGACGGAGGGGACC
TAACGCAGAGGATTAAACAGCAGAAAGGAAAGTTATTCCCCGAAGATACGGTACTTAATTGGTT
TATACAGATCTGTCTTGGAGTAAATCACATTCACAAGAGACGGGTTTTACACAGAGATATCAAG
TCCAAAAATGTCTTCCTCACCCACGATGGAAAAGTGAAATTGGGAGATTTTGGCTCTGCCCGCC
TTCTCTCCAGTCCCATGGCATTTGCACGCACGTATGTGGGAACACCTTATTATGTGCCTCCAGA
AATCTGGGAGAACCTGCCTTATAACAATAAAAGTGACATCTGGTCCTTGGGGTGCATCCTGTAT
GAACTCTGCGCTCTGAAGCATCCATTTCAGGCAAATAGTTGGAAAAATCTCATCCTGAAAATAT
GTCAGGGGCCCATCCACCCGCTGCCTGCTCTGTATTCCTCTAAGCTTCAGTGTCTGGTCAAGCA
GATGTTGAAAAGGAACCCTGTGCACCGTCCCTCCGCCACGACCCTGCTCTGCAGAGGTAGCTTA
GCCCCACTGGTCCTGAAGTGCTTGCCCCCTCAGATCATCAGAGAATATGGAGAACAGATATTAG
ATGAAGTAAAAATATCCAAGCCTCAGAACGTGAAAAAACAAGAATCAGGTAACCCACCAGAGCC
CCCGAGGAATGCCAGTCCAGCAAGCCCTCACAGGCAGAGGTGGGAGAGATACGGTCCCAGTTCC
GCTGTAGCAGCCTTGGAGAAAGCATCCATCCTGACCTCCAGTTTCACGGCGGAGGATGACAGAG
CAGGCGGTTCCGTAATAAAGTACAGTGAAGAAAATGCCCGCCGGCAGTGGGTCAGAGAGCCCCC
TGAGGCCTTGCTGTCTATGCTGAAGGGCGCTGATCTCAGCCTGGCATTTCAAACATACACAATC
CATAGACCAGGTACAGAAGGCTTCCTGAAAGGTCCCCTTTCTGAAGACACAGCGTCAGACAGCG
TCGACGGTGATCTCGATTCTGTCCTCGTAGACCCAGAGAGATTTGAACCTCGGTTGGACGAAGA
AGACACGGACTTTGAGGAAGATGATGAAAACCCTGATTGGGTGTCAGAACTTAAGAAGCAAGTG
GGACAGCGGGATGTAGGTGGTGAACAGCTCCTTGGAGAACGTGTCGGGGAGACTCTGGAGAGAA
ACTGATGTTGGGAGCCAAAGTGCGGACTGAGAAAATGTATCACAAGCTTACAAAGCAATCCGAA
CCCTTGTGAGATTTTAACACAAGGGAGGTCTATCAGATGCCGCTGTGCCTTGCATTCTGACAGA
ACAGAGGTGCAGTGCTCCCCTGTTGGCCATTAACTGTGTGTGACAATAGGAAATGACTTAACTC
CTTTGGTCCCTAGGACAAAACAATAAGAGTAATGATGCCTACCTCATAAGAACACTGACCAAGA
CAGTTAGCCATCCAGTGGTTGTTACCCACAGTTACTGTGTAACACTCTCACATTTCCTAAAGGT
TGAAGGATGCAAATACATTAAGCTGTGGCATAAAAGTGTGTGCTATTCTTCAATAATACTCAGT
TTGGATATGCTTCAA

hide sequence

RefSeq Acc Id:

XM_006253360 ⟹ XP_006253422

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	76,569,480 - 76,594,877 (+)	NCBI
mRatBN7.2	16	69,867,033 - 69,892,477 (+)	NCBI
Rnor_6.0	16	74,781,371 - 74,806,567 (+)	NCBI
Rnor_5.0	16	74,412,402 - 74,437,059 (+)	NCBI

Sequence:

show sequence

CCGCCCATGCCCCGCCCAGCGCCCGGCCAGGCGGCTGGCGAAGAAGCGACGCGCGCCGCTGGGA
GTTTGGGCGAGCCAGCAGTGACTAGGAGTGGAGCCCAGCTGCGCTGCCGACCATGGACAACTAC
ACAGTCCTGAGAGTGATAGGCCACGGCTCCTTCGGCAGCGTTCTTTTGGCTACAGAGAAAAGCA
GCAATCAGACATTCGCCATGAAGGAAATAAGACTGCTCAAGTCTTTCTCTGACGTACAGAATTG
TAGGAAAGAGGCTGTTCTGCTGGCCAAAATGAAACACCCCAATATTGTTGCCTTTAAGGAGTCA
TTCGAAGCTGAAGGGCATCTGTATATTGTGATGGAGTATTGTGACGGAGGGGACCTAACGCAGA
GGATTAAACAGCAGAAAGGAAAGTTATTCCCCGAAGATACGGTACTTAATTGGTTTATACAGAT
CTGTCTTGGAGTAAATCACATTCACAAGAGACGGGTTTTACACAGAGATATCAAGTCCAAAAAT
GTCTTCCTCACCCACGATGGAAAAGTGAAATTGGGAGATTTTGGCTCTGCCCGCCTTCTCTCCA
GTCCCATGGCATTTGCACGCACGTATGTGGGAACACCTTATTATGTGCCTCCAGAAATCTGGGA
GAACCTGCCTTATAACAATAAAAGTGACATCTGGTCCTTGGGGTGCATCCTGTATGAACTCTGC
GCTCTGAAGCATCCATTTCAGGCAAATAGTTGGAAAAATCTCATCCTGAAAATATGTCAGGGGC
CCATCCACCCGCTGCCTGCTCTGTATTCCTCTAAGCTTCAGTGTCTGGTCAAGCAGATGTTGAA
AAGGAACCCTGTGCACCGTCCCTCCGCCACGACCCTGCTCTGCAGAGGTAGCTTAGCCCCACTG
GTCCTGAAGTGCTTGCCCCCTCAGATCATCAGAGAATATGGAGAACAGATATTAGATGAAGTAA
AAATATCCAAGCCTCAGAACGTGAAAAAACAAGAATCAGGTAACCCACCAGAGCCCCCGAGGAA
TGCCAGTCCAGCAAGCCCTCACAGGCAGAGGTGGGAGAGATACGGTCCCAGTTCCGCTGTAGCA
GCCTTGGAGAAAGCATCCATCCTGACCTCCAGTTTCACGGCGGAGGATGACAGAGCAGGCGGTT
CCGTAATAAAGTACAGTGAAGAAAATGCCCGCCGGCAGTGGGTCAGAGAGCCCCCTGAGGCCTT
GCTGTCTATGCTGAAGGGCGCTGATCTCAGCCTGGCATTTCAAACATACACAATCCATAGACCA
GGTACAGAAGGCTTCCTGAAAGGTCCCCTTTCTGAAGACACAGCGTCAGACAGCGTCGACGGTG
ATCTCGATTCTGTCCTCGTAGACCCAGAGAGATTTGAACCTCGGTTGGACGAAGAAGACACGGA
CTTTGAGGAAGATGATGAAAACCCTGATTGGGTGTCAGAACTTAAGAAGCAAGTGGGACAGCGG
GATGTAGGTGGTGAACAGCTCCTTGGAGAACGTGTCGGGGAGACTCTGGAGAGAAACTGATGTT
GGGAGCCAAAGTGCGGACTGAGAAAATGTATCACAAGCTTACAAAGCAATCCGAACCCTTGTGA
GATTTTAACACAAGGGAGGTCTATCAGATGCCGCTGTGCCTTGCATTCTGACAGAACAGAGGTG
CAGTGCTCCCCTGTTGGCCATTAACTGTGTGTGACAATAGGAAATGACTTAACTCCTTTGGTCC
CTAGGACAAAACAATAAGAGTAATGATGCCTACCTCATAAGAACACTGACCAAGACAGTTAGCC
ATCCAGTGGTTGTTACCCACAGTTACTGTGTAACACTCTCACATTTCCTAAAGGTTGAAGGATG
CAAATACATTAAGCTGTGGCATAAAAGTGTGTGCTATTCTTCAATAATACTCAGTTTGGATATG
CTTCAA

hide sequence

RefSeq Acc Id:

XM_006253361 ⟹ XP_006253423

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	76,569,466 - 76,594,877 (+)	NCBI
mRatBN7.2	16	69,867,020 - 69,892,477 (+)	NCBI
Rnor_6.0	16	74,781,371 - 74,806,567 (+)	NCBI
Rnor_5.0	16	74,412,402 - 74,437,059 (+)	NCBI

Sequence:

show sequence

CCGCCCATGCCCCGCCCAGCGCCCGGCCAGGCGGCTGGCGAAGAAGCGACGCGCGCCGCTGGGA
GGTGGGTGAGTTTGGGCGAGCCAGCAGTGACTAGGAGTGGAGCCCAGCTGCGCTGCCGACCATG
GACAACTACACAGTCCTGAGAGTGATAGGCCACGGCTCCTTCGGCAGCGTTCTTTTGGCTACAG
AGAAAAGCAGCAATCAGACATTCGCCATGAAGGAAATAAGACTGCTCAAGTCTTTCTCTGACGT
ACAGAATTGTAGGAAAGAGGCTGTTCTGCTGGCCAAAATGAAACACCCCAATATTGTTGCCTTT
AAGGAGTCATTCGAAGCTGAAGGGCATCTGTATATTGTGATGGAGTATTGTGACGGAGGGGACC
TAACGCAGAGGATTAAACAGCAGAAAGGAAAGTTATTCCCCGAAGATACGGTACTTAATTGGTT
TATACAGATCTGTCTTGGAGTAAATCACATTCACAAGAGACGGGTTTTACACAGAGATATCAAG
TCCAAAAATGTCTTCCTCACCCACGATGGAAAAGTGAAATTGGGAGATTTTGGCTCTGCCCGCC
TTCTCTCCAGTCCCATGGCATTTGCACGCACGTATGTGGGAACACCTTATTATGTGCCTCCAGA
AATCTGGGAGAACCTGCCTTATAACAATAAAAGTGACATCTGGTCCTTGGGGTGCATCCTGTAT
GAACTCTGCGCTCTGAAGCATCCATTTCAGGCAAATAGTTGGAAAAATCTCATCCTGAAAATAT
GTCAGGGGCCCATCCACCCGCTGCCTGCTCTGTATTCCTCTAAGCTTCAGTGTCTGGTCAAGCA
GATGTTGAAAAGGAACCCTGTGCACCGTCCCTCCGCCACGACCCTGCTCTGCAGAGGTAGCTTA
GCCCCACTGGTCCTGAAGTGCTTGCCCCCTCAGATCATCAGAGAATATGGAGAACAGATATTAG
ATGAAGTAAAAATATCCAAGCCTCAGAACGTGAAAAAACAAGAATCAGGTAACCCACCAGAGCC
CCCGAGGAATGCCAGTCCAGCAAGCCCTCACAGGCAGAGGTGGGAGAGATACGGTCCCAGTTCC
GCTGTAGCAGCCTTGGAGAAAGCATCCATCCTGACCTCCAGTTTCACGGCGGAGGATGACAGAG
GCGGTTCCGTAATAAAGTACAGTGAAGAAAATGCCCGCCGGCAGTGGGTCAGAGAGCCCCCTGA
GGCCTTGCTGTCTATGCTGAAGGGCGCTGATCTCAGCCTGGCATTTCAAACATACACAATCCAT
AGACCAGGTACAGAAGGCTTCCTGAAAGGTCCCCTTTCTGAAGACACAGCGTCAGACAGCGTCG
ACGGTGATCTCGATTCTGTCCTCGTAGACCCAGAGAGATTTGAACCTCGGTTGGACGAAGAAGA
CACGGACTTTGAGGAAGATGATGAAAACCCTGATTGGGTGTCAGAACTTAAGAAGCAAGTGGGA
CAGCGGGATGTAGGTGGTGAACAGCTCCTTGGAGAACGTGTCGGGGAGACTCTGGAGAGAAACT
GATGTTGGGAGCCAAAGTGCGGACTGAGAAAATGTATCACAAGCTTACAAAGCAATCCGAACCC
TTGTGAGATTTTAACACAAGGGAGGTCTATCAGATGCCGCTGTGCCTTGCATTCTGACAGAACA
GAGGTGCAGTGCTCCCCTGTTGGCCATTAACTGTGTGTGACAATAGGAAATGACTTAACTCCTT
TGGTCCCTAGGACAAAACAATAAGAGTAATGATGCCTACCTCATAAGAACACTGACCAAGACAG
TTAGCCATCCAGTGGTTGTTACCCACAGTTACTGTGTAACACTCTCACATTTCCTAAAGGTTGA
AGGATGCAAATACATTAAGCTGTGGCATAAAAGTGTGTGCTATTCTTCAATAATACTCAGTTTG
GATATGCTTCAA

hide sequence

RefSeq Acc Id:

XM_006253362 ⟹ XP_006253424

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	76,569,466 - 76,594,877 (+)	NCBI
mRatBN7.2	16	69,867,020 - 69,892,477 (+)	NCBI
Rnor_6.0	16	74,781,371 - 74,806,567 (+)	NCBI
Rnor_5.0	16	74,412,402 - 74,437,059 (+)	NCBI

Sequence:

show sequence

CCGCCCATGCCCCGCCCAGCGCCCGGCCAGGCGGCTGGCGAAGAAGCGACGCGCGCCGCTGGGA
GGTGGGTGAGTTTGGGCGAGCCAGCAGTGACTAGGAGTGGAGCCCAGCTGCGCTGCCGACCATG
GACAACTACACAGTCCTGAGAGTGATAGGCCACGGCTCCTTCGGCAGCGTTCTTTTGGCTACAG
AGAAAAGCAGCAATCAGACATTCGCCATGAAGGAAATAAGACTGCTCAAGTCTTTCTCTGACGT
ACAGAATTGTAGGAAAGAGGCTGTTCTGCTGGCCAAAATGAAACACCCCAATATTGTTGCCTTT
AAGGAGTCATTCGAAGCTGAAGGGCATCTGTATATTGTGATGGAGTATTGTGACGGAGGGGACC
TAACGCAGAGGATTAAACAGCAGAAAGGAAAGTTATTCCCCGAAGATACGGTACTTAATTGGTT
TATACAGATCTGTCTTGGAGTAAATCACATTCACAAGAGACGGGTTTTACACAGAGATATCAAG
TCCAAAAATGTCTTCCTCACCCACGATGGAAAAGTGAAATTGGGAGATTTTGGCTCTGCCCGCC
TTCTCTCCAGTCCCATGGCATTTGCACGCACGTATGTGGGAACACCTTATTATGTGCCTCCAGA
AATCTGGGAGAACCTGCCTTATAACAATAAAAGTGACATCTGGTCCTTGGGGTGCATCCTGTAT
GAACTCTGCGCTCTGAAGCATCCATTTCAGGCAAATAGTTGGAAAAATCTCATCCTGAAAATAT
GTCAGGGGCCCATCCACCCGCTGCCTGCTCTGTATTCCTCTAAGCTTCAGTGTCTGGTCAAGCA
GATGTTGAAAAGGAACCCTGTGCACCGTCCCTCCGCCACGACCCTGCTCTGCAGAGGTAGCTTA
GCCCCACTGGTCCTGAAGTGCTTGCCCCCTCAGATCATCAGAGAATATGGAGAACAGATATTAG
ATGAAGTAAAAATATCCAAGCCTCAGAACGTGAAAAAACAAGGTAACCCACCAGAGCCCCCGAG
GAATGCCAGTCCAGCAAGCCCTCACAGGCAGAGGTGGGAGAGATACGGTCCCAGTTCCGCTGTA
GCAGCCTTGGAGAAAGCATCCATCCTGACCTCCAGTTTCACGGCGGAGGATGACAGAGCAGGCG
GTTCCGTAATAAAGTACAGTGAAGAAAATGCCCGCCGGCAGTGGGTCAGAGAGCCCCCTGAGGC
CTTGCTGTCTATGCTGAAGGGCGCTGATCTCAGCCTGGCATTTCAAACATACACAATCCATAGA
CCAGGTACAGAAGGCTTCCTGAAAGGTCCCCTTTCTGAAGACACAGCGTCAGACAGCGTCGACG
GTGATCTCGATTCTGTCCTCGTAGACCCAGAGAGATTTGAACCTCGGTTGGACGAAGAAGACAC
GGACTTTGAGGAAGATGATGAAAACCCTGATTGGGTGTCAGAACTTAAGAAGCAAGTGGGACAG
CGGGATGTAGGTGGTGAACAGCTCCTTGGAGAACGTGTCGGGGAGACTCTGGAGAGAAACTGAT
GTTGGGAGCCAAAGTGCGGACTGAGAAAATGTATCACAAGCTTACAAAGCAATCCGAACCCTTG
TGAGATTTTAACACAAGGGAGGTCTATCAGATGCCGCTGTGCCTTGCATTCTGACAGAACAGAG
GTGCAGTGCTCCCCTGTTGGCCATTAACTGTGTGTGACAATAGGAAATGACTTAACTCCTTTGG
TCCCTAGGACAAAACAATAAGAGTAATGATGCCTACCTCATAAGAACACTGACCAAGACAGTTA
GCCATCCAGTGGTTGTTACCCACAGTTACTGTGTAACACTCTCACATTTCCTAAAGGTTGAAGG
ATGCAAATACATTAAGCTGTGGCATAAAAGTGTGTGCTATTCTTCAATAATACTCAGTTTGGAT
ATGCTTCAA

hide sequence

RefSeq Acc Id:

XM_006253363 ⟹ XP_006253425

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	76,575,413 - 76,594,877 (+)	NCBI
mRatBN7.2	16	69,871,012 - 69,892,477 (+)	NCBI
Rnor_6.0	16	74,787,310 - 74,806,567 (+)	NCBI
Rnor_5.0	16	74,412,402 - 74,437,059 (+)	NCBI

Sequence:

show sequence

CTCTGACGTACAGAATTGTAGGAAAGAGGCTGTTCTGCTGGCCAAAATGAAACACCCCAATATT
GTTGCCTTTAAGGAGTCATTCGAAGCGTCTCCTGTGTGTTTCAGCTGAAGGGCATCTGTATATT
GTGATGGAGTATTGTGACGGAGGGGACCTAACGCAGAGGATTAAACAGCAGAAAGGAAAGTTAT
TCCCCGAAGATACGGTACTTAATTGGTTTATACAGATCTGTCTTGGAGTAAATCACATTCACAA
GAGACGGGTTTTACACAGAGATATCAAGTCCAAAAATGTCTTCCTCACCCACGATGGAAAAGTG
AAATTGGGAGATTTTGGCTCTGCCCGCCTTCTCTCCAGTCCCATGGCATTTGCACGCACGTATG
TGGGAACACCTTATTATGTGCCTCCAGAAATCTGGGAGAACCTGCCTTATAACAATAAAAGTGA
CATCTGGTCCTTGGGGTGCATCCTGTATGAACTCTGCGCTCTGAAGCATCCATTTCAGGCAAAT
AGTTGGAAAAATCTCATCCTGAAAATATGTCAGGGGCCCATCCACCCGCTGCCTGCTCTGTATT
CCTCTAAGCTTCAGTGTCTGGTCAAGCAGATGTTGAAAAGGAACCCTGTGCACCGTCCCTCCGC
CACGACCCTGCTCTGCAGAGGTAGCTTAGCCCCACTGGTCCTGAAGTGCTTGCCCCCTCAGATC
ATCAGAGAATATGGAGAACAGATATTAGATGAAGTAAAAATATCCAAGCCTCAGAACGTGAAAA
AACAAGAATCAGGTAACCCACCAGAGCCCCCGAGGAATGCCAGTCCAGCAAGCCCTCACAGGCA
GAGGTGGGAGAGATACGGTCCCAGTTCCGCTGTAGCAGCCTTGGAGAAAGCATCCATCCTGACC
TCCAGTTTCACGGCGGAGGATGACAGAGCAGGCGGTTCCGTAATAAAGTACAGTGAAGAAAATG
CCCGCCGGCAGTGGGTCAGAGAGCCCCCTGAGGCCTTGCTGTCTATGCTGAAGGGCGCTGATCT
CAGCCTGGCATTTCAAACATACACAATCCATAGACCAGGTACAGAAGGCTTCCTGAAAGGTCCC
CTTTCTGAAGACACAGCGTCAGACAGCGTCGACGGTGATCTCGATTCTGTCCTCGTAGACCCAG
AGAGATTTGAACCTCGGTTGGACGAAGAAGACACGGACTTTGAGGAAGATGATGAAAACCCTGA
TTGGGTGTCAGAACTTAAGAAGCAAGTGGGACAGCGGGATGTAGGTGGTGAACAGCTCCTTGGA
GAACGTGTCGGGGAGACTCTGGAGAGAAACTGATGTTGGGAGCCAAAGTGCGGACTGAGAAAAT
GTATCACAAGCTTACAAAGCAATCCGAACCCTTGTGAGATTTTAACACAAGGGAGGTCTATCAG
ATGCCGCTGTGCCTTGCATTCTGACAGAACAGAGGTGCAGTGCTCCCCTGTTGGCCATTAACTG
TGTGTGACAATAGGAAATGACTTAACTCCTTTGGTCCCTAGGACAAAACAATAAGAGTAATGAT
GCCTACCTCATAAGAACACTGACCAAGACAGTTAGCCATCCAGTGGTTGTTACCCACAGTTACT
GTGTAACACTCTCACATTTCCTAAAGGTTGAAGGATGCAAATACATTAAGCTGTGGCATAAAAG
TGTGTGCTATTCTTCAATAATACTCAGTTTGGATATGCTTCAA

hide sequence

RefSeq Acc Id:

XM_039095233 ⟹ XP_038951161

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	76,569,465 - 76,590,363 (+)	NCBI
mRatBN7.2	16	69,867,020 - 69,887,917 (+)	NCBI

RefSeq Acc Id:

XM_039095234 ⟹ XP_038951162

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	76,569,465 - 76,590,354 (+)	NCBI
mRatBN7.2	16	69,867,020 - 69,887,911 (+)	NCBI

RefSeq Acc Id:

XM_063275457 ⟹ XP_063131527

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	76,569,481 - 76,594,877 (+)	NCBI

RefSeq Acc Id:

XM_063275458 ⟹ XP_063131528

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	76,569,481 - 76,594,877 (+)	NCBI

RefSeq Acc Id:

XM_063275459 ⟹ XP_063131529

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	76,573,365 - 76,594,877 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001414097	(Get FASTA)	NCBI Sequence Viewer
	XP_006253421	(Get FASTA)	NCBI Sequence Viewer
	XP_006253422	(Get FASTA)	NCBI Sequence Viewer
	XP_006253423	(Get FASTA)	NCBI Sequence Viewer
	XP_006253424	(Get FASTA)	NCBI Sequence Viewer
	XP_006253425	(Get FASTA)	NCBI Sequence Viewer
	XP_038951161	(Get FASTA)	NCBI Sequence Viewer
	XP_038951162	(Get FASTA)	NCBI Sequence Viewer
	XP_063131527	(Get FASTA)	NCBI Sequence Viewer
	XP_063131528	(Get FASTA)	NCBI Sequence Viewer
	XP_063131529	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM08988	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000017107.7
	ENSRNOP00000061987.4
	ENSRNOP00000073909.2

RefSeq Acc Id:	XP_006253421 ⟸ XM_006253359
- Peptide Label:	isoform X1
- UniProtKB:	D3ZCU1 (UniProtKB/TrEMBL), A0A0G2K6R1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDNYTVLRVIGHGSFGSVLLATEKSSNQTFAMKEIRLLKSFSDVQNCRKEAVLLAKMKHPNIVA FKESFEAEGHLYIVMEYCDGGDLTQRIKQQKGKLFPEDTVLNWFIQICLGVNHIHKRRVLHRDI KSKNVFLTHDGKVKLGDFGSARLLSSPMAFARTYVGTPYYVPPEIWENLPYNNKSDIWSLGCIL YELCALKHPFQANSWKNLILKICQGPIHPLPALYSSKLQCLVKQMLKRNPVHRPSATTLLCRGS LAPLVLKCLPPQIIREYGEQILDEVKISKPQNVKKQESGNPPEPPRNASPASPHRQRWERYGPS SAVAALEKASILTSSFTAEDDRAGGSVIKYSEENARRQWVREPPEALLSMLKGADLSLAFQTYT IHRPGTEGFLKGPLSEDTASDSVDGDLDSVLVDPERFEPRLDEEDTDFEEDDENPDWVSELKKQ VGQRDVGGEQLLGERVGETLERN hide sequence

RefSeq Acc Id:	XP_006253423 ⟸ XM_006253361
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K6R1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDNYTVLRVIGHGSFGSVLLATEKSSNQTFAMKEIRLLKSFSDVQNCRKEAVLLAKMKHPNIVA FKESFEAEGHLYIVMEYCDGGDLTQRIKQQKGKLFPEDTVLNWFIQICLGVNHIHKRRVLHRDI KSKNVFLTHDGKVKLGDFGSARLLSSPMAFARTYVGTPYYVPPEIWENLPYNNKSDIWSLGCIL YELCALKHPFQANSWKNLILKICQGPIHPLPALYSSKLQCLVKQMLKRNPVHRPSATTLLCRGS LAPLVLKCLPPQIIREYGEQILDEVKISKPQNVKKQESGNPPEPPRNASPASPHRQRWERYGPS SAVAALEKASILTSSFTAEDDRGGSVIKYSEENARRQWVREPPEALLSMLKGADLSLAFQTYTI HRPGTEGFLKGPLSEDTASDSVDGDLDSVLVDPERFEPRLDEEDTDFEEDDENPDWVSELKKQV GQRDVGGEQLLGERVGETLERN hide sequence

RefSeq Acc Id:	XP_006253424 ⟸ XM_006253362
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K6R1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDNYTVLRVIGHGSFGSVLLATEKSSNQTFAMKEIRLLKSFSDVQNCRKEAVLLAKMKHPNIVA FKESFEAEGHLYIVMEYCDGGDLTQRIKQQKGKLFPEDTVLNWFIQICLGVNHIHKRRVLHRDI KSKNVFLTHDGKVKLGDFGSARLLSSPMAFARTYVGTPYYVPPEIWENLPYNNKSDIWSLGCIL YELCALKHPFQANSWKNLILKICQGPIHPLPALYSSKLQCLVKQMLKRNPVHRPSATTLLCRGS LAPLVLKCLPPQIIREYGEQILDEVKISKPQNVKKQGNPPEPPRNASPASPHRQRWERYGPSSA VAALEKASILTSSFTAEDDRAGGSVIKYSEENARRQWVREPPEALLSMLKGADLSLAFQTYTIH RPGTEGFLKGPLSEDTASDSVDGDLDSVLVDPERFEPRLDEEDTDFEEDDENPDWVSELKKQVG QRDVGGEQLLGERVGETLERN hide sequence

RefSeq Acc Id:	XP_006253422 ⟸ XM_006253360
- Peptide Label:	isoform X1
- UniProtKB:	D3ZCU1 (UniProtKB/TrEMBL), A0A0G2K6R1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDNYTVLRVIGHGSFGSVLLATEKSSNQTFAMKEIRLLKSFSDVQNCRKEAVLLAKMKHPNIVA FKESFEAEGHLYIVMEYCDGGDLTQRIKQQKGKLFPEDTVLNWFIQICLGVNHIHKRRVLHRDI KSKNVFLTHDGKVKLGDFGSARLLSSPMAFARTYVGTPYYVPPEIWENLPYNNKSDIWSLGCIL YELCALKHPFQANSWKNLILKICQGPIHPLPALYSSKLQCLVKQMLKRNPVHRPSATTLLCRGS LAPLVLKCLPPQIIREYGEQILDEVKISKPQNVKKQESGNPPEPPRNASPASPHRQRWERYGPS SAVAALEKASILTSSFTAEDDRAGGSVIKYSEENARRQWVREPPEALLSMLKGADLSLAFQTYT IHRPGTEGFLKGPLSEDTASDSVDGDLDSVLVDPERFEPRLDEEDTDFEEDDENPDWVSELKKQ VGQRDVGGEQLLGERVGETLERN hide sequence

RefSeq Acc Id:

XP_006253425 ⟸ XM_006253363

- Peptide Label:

isoform X5

- Sequence:

show sequence

MEYCDGGDLTQRIKQQKGKLFPEDTVLNWFIQICLGVNHIHKRRVLHRDIKSKNVFLTHDGKVK
LGDFGSARLLSSPMAFARTYVGTPYYVPPEIWENLPYNNKSDIWSLGCILYELCALKHPFQANS
WKNLILKICQGPIHPLPALYSSKLQCLVKQMLKRNPVHRPSATTLLCRGSLAPLVLKCLPPQII
REYGEQILDEVKISKPQNVKKQESGNPPEPPRNASPASPHRQRWERYGPSSAVAALEKASILTS
SFTAEDDRAGGSVIKYSEENARRQWVREPPEALLSMLKGADLSLAFQTYTIHRPGTEGFLKGPL
SEDTASDSVDGDLDSVLVDPERFEPRLDEEDTDFEEDDENPDWVSELKKQVGQRDVGGEQLLGE
RVGETLERN

hide sequence

Ensembl Acc Id:

ENSRNOP00000073909 ⟸ ENSRNOT00000090646

Ensembl Acc Id:

ENSRNOP00000017107 ⟸ ENSRNOT00000017106

Ensembl Acc Id:

ENSRNOP00000061987 ⟸ ENSRNOT00000064316

RefSeq Acc Id:	XP_038951161 ⟸ XM_039095233
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038951162 ⟸ XM_039095234
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063131527 ⟸ XM_063275457
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063131528 ⟸ XM_063275458
- Peptide Label:	isoform X4
- UniProtKB:	A6IW84 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001414097 ⟸ NM_001427168
- UniProtKB:	A6IW84 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063131529 ⟸ XM_063275459
- Peptide Label:	isoform X5

Protein Domains

Protein kinase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZTD6-F1-model_v2	AlphaFold	D3ZTD6	1-514	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307419	AgrOrtholog
BioCyc Gene	G2FUF-10861	BioCyc
Ensembl Genes	ENSRNOG00000012757	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000017106.7	UniProtKB/TrEMBL
	ENSRNOT00000064316.5	UniProtKB/TrEMBL
	ENSRNOT00000090646.2	UniProtKB/TrEMBL
Gene3D-CATH	Transferase(Phosphotransferase) domain 1	UniProtKB/TrEMBL
InterPro	Kinase-like_dom	UniProtKB/TrEMBL
	Prot_kinase_cat_dom	UniProtKB/TrEMBL
	Protein_kinase_ATP_BS	UniProtKB/TrEMBL
	Ser/Thr_prot_kinase_AS	UniProtKB/TrEMBL
NCBI Gene	306576	ENTREZGENE
PANTHER	SERINE/THREONINE-PROTEIN KINASE NEK3	UniProtKB/TrEMBL
	SERINE/THREONINE-PROTEIN KINASE NEK3	UniProtKB/TrEMBL
Pfam	Pkinase	UniProtKB/TrEMBL
PhenoGen	Nek3	PhenoGen
PROSITE	PROTEIN_KINASE_ATP	UniProtKB/TrEMBL
	PROTEIN_KINASE_DOM	UniProtKB/TrEMBL
	PROTEIN_KINASE_ST	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000012757	RatGTEx
SMART	S_TKc	UniProtKB/TrEMBL
Superfamily-SCOP	Kinase_like	UniProtKB/TrEMBL
UniProt	A0A0G2K6R1	ENTREZGENE, UniProtKB/TrEMBL
	A6IW84	ENTREZGENE, UniProtKB/TrEMBL
	D3ZCU1	ENTREZGENE, UniProtKB/TrEMBL
	D3ZTD6_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2012-11-21	Nek3	NIMA-related kinase 3	Nek3	NIMA (never in mitosis gene a)-related kinase 3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-09-25	Nek3	NIMA (never in mitosis gene a)-related kinase 3	Nek3	NIMA (never in mitosis gene a)-related expressed kinase 3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Nek3	NIMA (never in mitosis gene a)-related expressed kinase 3	Nek3_predicted	NIMA (never in mitosis gene a)-related expressed kinase 3 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Nek3_predicted	NIMA (never in mitosis gene a)-related expressed kinase 3 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar