Pigx (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 11 | 82,192,125 - 82,208,062 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 11 | 68,687,126 - 68,703,067 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 11 | 68,687,093 - 68,703,472 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 11 | 77,524,191 - 77,540,130 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 11 | 70,186,226 - 70,201,755 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 11 | 69,213,288 - 69,229,226 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 11 | 71,938,388 - 71,954,225 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 11 | 71,938,388 - 71,954,224 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 11 | 75,013,627 - 75,029,485 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 11 | 70,508,995 - 70,524,958 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 11 | 70,563,550 - 70,582,494 (+) | NCBI | | | | | Celera | 11 | 68,109,572 - 68,125,462 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | q22 | NCBI | | | | |
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PIGX (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 3 | 196,712,377 - 196,736,007 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 196,639,775 - 196,736,007 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 196,439,248 - 196,462,878 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 197,923,643 - 197,947,275 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 197,927,624 - 197,950,077 | NCBI | | | | | Celera | 3 | 195,019,754 - 195,043,917 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q29 | NCBI | | | | | HuRef | 3 | 193,735,931 - 193,759,454 (+) | NCBI | | HuRef | | | CHM1_1 | 3 | 196,410,436 - 196,434,105 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 199,431,769 - 199,455,384 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Pigx (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 16 | 31,903,234 - 31,918,545 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 16 | 31,903,234 - 31,918,558 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 16 | 32,084,416 - 32,099,727 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 16 | 32,084,416 - 32,099,740 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 16 | 32,084,502 - 32,099,813 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 16 | 32,004,171 - 32,019,478 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 16 | 32,580,549 - 32,595,838 (-) | NCBI | | Celera | | | Cytogenetic Map | 16 | B2 | NCBI | | | | | cM Map | 16 | 22.4 | NCBI | | | | |
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Pigx (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 | NW_004955420 | 12,825,438 - 12,853,658 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PIGX (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 194,582,327 - 194,605,911 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 194,587,041 - 194,610,630 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 194,056,597 - 194,080,183 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 203,996,513 - 204,019,511 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 203,996,539 - 204,017,416 (+) | Ensembl | panpan1.1 | | panPan2 | |
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PIGX (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 33 | 29,740,435 - 29,767,931 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 33 | 29,692,371 - 29,767,771 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 33 | 29,764,080 - 29,791,974 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 33 | 29,982,322 - 30,011,868 (+) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 33 | 29,759,562 - 29,789,070 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 33 | 29,814,479 - 29,844,016 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 33 | 30,437,081 - 30,466,621 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Pigx (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405602 | 124,571,800 - 124,596,332 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936784 | 1,289,671 - 1,312,744 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936784 | 1,288,937 - 1,313,469 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PIGX (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 13 | 133,389,060 - 133,420,276 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 133,389,198 - 133,420,189 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 143,038,001 - 143,068,626 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PIGX (Chlorocebus sabaeus - green monkey) |
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Pigx (Heterocephalus glaber - naked mole-rat) |
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