Aebp2 (AE binding protein 2) - Rat Genome Database

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Gene: Aebp2 (AE binding protein 2) Rattus norvegicus
Analyze
Symbol: Aebp2
Name: AE binding protein 2
RGD ID: 1307233
Description: Predicted to enable transcription coregulator activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of DNA-templated transcription. Predicted to be located in nucleus. Predicted to be part of ESC/E(Z) complex. Orthologous to human AEBP2 (AE binding protein 2); PARTICIPATES IN histone modification pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 3,3',5,5'-tetrabromobisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC297705; zinc finger protein AEBP2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84175,258,286 - 175,297,149 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl4175,258,887 - 175,326,422 (+)EnsemblGRCr8
mRatBN7.24173,527,881 - 173,566,033 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4173,528,344 - 173,593,100 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx4179,823,344 - 179,860,945 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04175,607,547 - 175,645,144 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04174,228,112 - 174,265,711 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.04174,799,378 - 174,863,260 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4174,810,959 - 174,863,260 (+)Ensemblrn6Rnor6.0
Rnor_5.04239,031,912 - 239,094,663 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.44177,821,215 - 177,876,673 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera4162,087,101 - 162,139,793 (+)NCBICelera
RGSC_v3.14178,028,657 - 178,089,785 (+)NCBI
Cytogenetic Map4q44NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
ESC/E(Z) complex  (IBA,IEA,ISO)
nucleoplasm  (IEA,ISO)
nucleus  (IEA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. SET for life: biochemical activities and biological functions of SET domain-containing proteins. Herz HM, etal., Trends Biochem Sci. 2013 Dec;38(12):621-39. doi: 10.1016/j.tibs.2013.09.004. Epub 2013 Oct 20.
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10329662   PMID:20064375   PMID:20064376   PMID:20075857   PMID:31451685  


Genomics

Comparative Map Data
Aebp2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84175,258,286 - 175,297,149 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl4175,258,887 - 175,326,422 (+)EnsemblGRCr8
mRatBN7.24173,527,881 - 173,566,033 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4173,528,344 - 173,593,100 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx4179,823,344 - 179,860,945 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04175,607,547 - 175,645,144 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04174,228,112 - 174,265,711 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.04174,799,378 - 174,863,260 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4174,810,959 - 174,863,260 (+)Ensemblrn6Rnor6.0
Rnor_5.04239,031,912 - 239,094,663 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.44177,821,215 - 177,876,673 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera4162,087,101 - 162,139,793 (+)NCBICelera
RGSC_v3.14178,028,657 - 178,089,785 (+)NCBI
Cytogenetic Map4q44NCBI
AEBP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381219,404,072 - 19,522,227 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1219,404,045 - 19,720,801 (+)Ensemblhg38GRCh38
GRCh371219,592,426 - 19,675,161 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361219,483,900 - 19,564,846 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341219,483,899 - 19,564,845NCBI
Celera1224,745,851 - 24,829,274 (+)NCBICelera
Cytogenetic Map12p12.3NCBI
HuRef1219,361,681 - 19,444,406 (+)NCBIHuRef
CHM1_11219,558,199 - 19,640,737 (+)NCBICHM1_1
T2T-CHM13v2.01219,280,830 - 19,399,011 (+)NCBIT2T-CHM13v2.0
Aebp2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396140,567,480 - 140,624,198 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6140,546,644 - 140,713,010 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm386140,622,454 - 140,678,472 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6140,622,663 - 140,678,472 (+)Ensemblmm10GRCm38
MGSCv376140,571,184 - 140,625,939 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv366140,585,069 - 140,639,824 (+)NCBIMGSCv36mm8
Celera6143,668,935 - 143,740,627 (+)NCBICelera
Cytogenetic Map6G2NCBI
cM Map670.71NCBI
Aebp2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541315,495,073 - 15,561,227 (+)Ensembl
ChiLan1.0NW_00495541315,514,247 - 15,561,233 (+)NCBIChiLan1.0ChiLan1.0
AEBP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21024,884,711 - 25,045,660 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11224,881,473 - 25,005,854 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01219,440,493 - 19,522,549 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11219,825,465 - 19,907,462 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1219,825,465 - 19,907,462 (+)EnsemblpanPan2panpan1.1
AEBP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12727,654,141 - 27,722,922 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2727,656,406 - 27,722,433 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2718,726,338 - 18,820,890 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02727,963,731 - 28,059,654 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2727,970,883 - 28,059,557 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12727,812,537 - 27,907,188 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02727,795,952 - 27,891,792 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02718,431,183 - 18,526,580 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Aebp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494588,905,278 - 88,967,401 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365486,810,002 - 6,889,614 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365486,828,190 - 6,890,287 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AEBP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl553,617,358 - 53,691,509 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1553,617,362 - 53,691,487 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2556,913,021 - 56,987,152 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AEBP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11119,288,551 - 19,401,925 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1119,288,493 - 19,374,301 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366606915,752,746 - 15,865,180 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Aebp2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475218,956,481 - 19,023,620 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462475218,954,095 - 19,023,656 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Aebp2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v168,893,605 - 8,930,431 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Aebp2
135 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:136
Count of miRNA genes:116
Interacting mature miRNAs:126
Transcripts:ENSRNOT00000035507
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
6478754Anxrr43Anxiety related response QTL 430.14035locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4146370897184426481Rat
724558Plsm2Polydactyly-luxate syndrome (PLS) morphotypes QTL 20.0003hindlimb integrity trait (VT:0010563)hind foot phalanges count (CMO:0001949)4134095016179095016Rat
6478693Anxrr32Anxiety related response QTL 320.00092locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4146370897184426481Rat
6478757Anxrr44Anxiety related response QTL 440.01087locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
1358364Sradr4Stress Responsive Adrenal Weight QTL 44.92adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)4131384565176384565Rat
1331738Bp209Blood pressure QTL 2092.979arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)4140059299181024663Rat
6478700Anxrr33Anxiety related response QTL 330.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4146370897184426481Rat
1298524Oia8Oil induced arthritis QTL 8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4140059299184426481Rat
10053718Scort25Serum corticosterone level QTL 252.150.0097blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)4157292416184426481Rat
738009Sach4Saccharine consumption QTL 44.90.000016consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)460916264184426481Rat
10401796Kidm48Kidney mass QTL 48kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)4147299608184426481Rat
6478718Anxrr34Anxiety related response QTL 340.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4146370897184426481Rat
6478782Anxrr52Anxiety related response QTL 520.02091locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
6478720Alc23Alcohol consumption QTL 230.00509drinking behavior trait (VT:0001422)ethanol drink intake rate to body weight ratio (CMO:0001616)4155834926184426481Rat
6478785Anxrr53Anxiety related response QTL 530.01397locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
1576316Ept5Estrogen-induced pituitary tumorigenesis QTL 53.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)4100752691179366077Rat
1581566Eae21Experimental allergic encephalomyelitis QTL 216.2body mass (VT:0001259)maximum body weight loss to initial body weight ratio (CMO:0001400)4137447185182447185Rat
1578674Bmd12Bone mineral density QTL 123.8femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)4137430611182430611Rat
6478728Anxrr36Anxiety related response QTL 360.01061locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
738016Alc16Alcohol consumption QTL 163.60.00015consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)460916264184426481Rat
634342Cia24Collagen induced arthritis QTL 244.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4148121375176967367Rat
6478733Anxrr37Anxiety related response QTL 370.00095locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
61362Oia2Oil induced arthritis QTL 20.001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4140059299184426481Rat
6478737Anxrr38Anxiety related response QTL 380.00159locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
2293659Bmd35Bone mineral density QTL 354.50.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)4160623982184426481Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)412212457182430611Rat
6478748Anxrr42Anxiety related response QTL 420.28008locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4146370897184426481Rat

Markers in Region
RH127497  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24173,562,092 - 173,562,297 (+)MAPPERmRatBN7.2
Rnor_6.04174,833,007 - 174,833,211NCBIRnor6.0
Rnor_5.04239,065,305 - 239,065,509UniSTSRnor5.0
RGSC_v3.44177,843,132 - 177,843,336UniSTSRGSC3.4
Celera4162,109,147 - 162,109,351UniSTS
RH 3.4 Map41034.0UniSTS
Cytogenetic Map4q44UniSTS
RH144351  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24173,564,803 - 173,565,013 (+)MAPPERmRatBN7.2
Rnor_6.04174,835,718 - 174,835,927NCBIRnor6.0
Rnor_5.04239,068,016 - 239,068,225UniSTSRnor5.0
RGSC_v3.44177,845,843 - 177,846,052UniSTSRGSC3.4
Celera4162,111,858 - 162,112,067UniSTS
RH 3.4 Map41035.1UniSTS
Cytogenetic Map4q44UniSTS
BE108006  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24173,563,877 - 173,564,037 (+)MAPPERmRatBN7.2
Rnor_6.04174,834,792 - 174,834,951NCBIRnor6.0
Rnor_5.04239,067,090 - 239,067,249UniSTSRnor5.0
RGSC_v3.44177,844,917 - 177,845,076UniSTSRGSC3.4
Celera4162,110,932 - 162,111,091UniSTS
RH 3.4 Map41041.9UniSTS
Cytogenetic Map4q44UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000035507   ⟹   ENSRNOP00000036497
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl4175,258,887 - 175,293,593 (+)Ensembl
mRatBN7.2 Ensembl4173,540,038 - 173,593,100 (+)Ensembl
Rnor_6.0 Ensembl4174,810,959 - 174,863,260 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000101024   ⟹   ENSRNOP00000086613
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl4175,259,544 - 175,316,474 (+)Ensembl
mRatBN7.2 Ensembl4173,528,344 - 173,563,484 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000110160   ⟹   ENSRNOP00000083862
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl4175,259,544 - 175,326,422 (+)Ensembl
mRatBN7.2 Ensembl4173,528,344 - 173,561,408 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000110876   ⟹   ENSRNOP00000083013
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl4175,259,544 - 175,293,593 (+)Ensembl
mRatBN7.2 Ensembl4173,528,344 - 173,562,358 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000124909   ⟹   ENSRNOP00000107875
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl4175,259,544 - 175,295,568 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000143260   ⟹   ENSRNOP00000105958
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl4175,259,544 - 175,297,149 (+)Ensembl
RefSeq Acc Id: NM_001401545   ⟹   NP_001388474
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84175,259,544 - 175,297,149 (+)NCBI
mRatBN7.24173,528,424 - 173,566,033 (+)NCBI
RefSeq Acc Id: XM_039107461   ⟹   XP_038963389
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84175,259,586 - 175,294,601 (+)NCBI
mRatBN7.24173,528,467 - 173,564,094 (+)NCBI
RefSeq Acc Id: XM_039107462   ⟹   XP_038963390
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84175,259,586 - 175,296,253 (+)NCBI
mRatBN7.24173,528,467 - 173,566,033 (+)NCBI
RefSeq Acc Id: XM_039107463   ⟹   XP_038963391
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84175,258,286 - 175,294,601 (+)NCBI
mRatBN7.24173,527,881 - 173,564,094 (+)NCBI
Ensembl Acc Id: ENSRNOP00000036497   ⟸   ENSRNOT00000035507
RefSeq Acc Id: XP_038963391   ⟸   XM_039107463
- Peptide Label: isoform X3
- UniProtKB: A6IMN6 (UniProtKB/TrEMBL),   D3ZED3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038963390   ⟸   XM_039107462
- Peptide Label: isoform X2
- UniProtKB: A0A8I6AAA0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038963389   ⟸   XM_039107461
- Peptide Label: isoform X1
- UniProtKB: A0A8I6A054 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000083862   ⟸   ENSRNOT00000110160
Ensembl Acc Id: ENSRNOP00000083013   ⟸   ENSRNOT00000110876
Ensembl Acc Id: ENSRNOP00000086613   ⟸   ENSRNOT00000101024
RefSeq Acc Id: NP_001388474   ⟸   NM_001401545
- UniProtKB: A0A8I6AAA0 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000105958   ⟸   ENSRNOT00000143260
Ensembl Acc Id: ENSRNOP00000107875   ⟸   ENSRNOT00000124909
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZED3-F1-model_v2 AlphaFold D3ZED3 1-308 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307233 AgrOrtholog
BioCyc Gene G2FUF-42533 BioCyc
Ensembl Genes ENSRNOG00000008929 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000035507 ENTREZGENE
  ENSRNOT00000035507.6 UniProtKB/TrEMBL
  ENSRNOT00000101024.2 UniProtKB/TrEMBL
  ENSRNOT00000110160.2 UniProtKB/TrEMBL
  ENSRNOT00000110876 ENTREZGENE
  ENSRNOT00000110876.2 UniProtKB/TrEMBL
  ENSRNOT00000124909 ENTREZGENE
  ENSRNOT00000124909.1 UniProtKB/TrEMBL
  ENSRNOT00000143260 ENTREZGENE
  ENSRNOT00000143260.1 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro AEBP2/jing_C2H2-ZnF UniProtKB/TrEMBL
  Znf_C2H2/integrase_DNA-bd UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
NCBI Gene 297705 ENTREZGENE
PANTHER ZINC FINGER PROTEIN AEBP2 UniProtKB/TrEMBL
  ZINC FINGER PROTEIN AEBP2 UniProtKB/TrEMBL
PhenoGen Aebp2 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000008929 RatGTEx
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt A0A8I5ZWB4_RAT UniProtKB/TrEMBL
  A0A8I6A054 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AAA0 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LV41_RAT UniProtKB/TrEMBL
  A6IMN6 ENTREZGENE, UniProtKB/TrEMBL
  D3ZED3 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Aebp2  AE binding protein 2   Aebp2_predicted  AE binding protein 2 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Aebp2_predicted  AE binding protein 2 (predicted)      Symbol and Name status set to approved 70820 APPROVED