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Gene: Slc35b3 (solute carrier family 35 member B3) Rattus norvegicus

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Symbol:

Slc35b3

Name:

solute carrier family 35 member B3

RGD ID:

1307183

Description:

Predicted to enable 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity. Predicted to be involved in 3'-phosphoadenosine 5'-phosphosulfate transport and 5'-adenylyl sulfate transmembrane transport. Predicted to be located in membrane. Predicted to be active in Golgi membrane; endoplasmic reticulum membrane; and trans-Golgi network. Orthologous to human SLC35B3 (solute carrier family 35 member B3); INTERACTS WITH 2,4-dinitrotoluene; bisphenol A; cadmium dichloride.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

adenosine 3'-phospho 5'-phosphosulfate transporter 2; LOC306866; solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3; solute carrier family 35, member B3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLC35B3 (solute carrier family 35 member B3)	HGNC	EggNOG, Ensembl, HomoloGene, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Slc35b3 (solute carrier family 35, member B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Slc35b3 (solute carrier family 35 member B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SLC35B3 (solute carrier family 35 member B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SLC35B3 (solute carrier family 35 member B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Slc35b3 (solute carrier family 35 member B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SLC35B3 (solute carrier family 35 member B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SLC35B3 (solute carrier family 35 member B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Slc35b3 (solute carrier family 35 member B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Slc35b3 (solute carrier family 35 member B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	SLC35B1 (solute carrier family 35 member B1)	HGNC	Inparanoid
Alliance orthologs ³
Homo sapiens (human):	SLC35B3 (solute carrier family 35 member B3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Slc35b3 (solute carrier family 35, member B3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	slc35b3 (solute carrier family 35 member B3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	pst-2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Papst2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	slc35b3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	slc35b3	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	26,052,249 - 26,078,686 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	26,052,232 - 26,079,505 (+)	Ensembl				GRCr8
mRatBN7.2	17	25,846,590 - 25,873,115 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	25,846,748 - 25,872,557 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	25,714,852 - 25,741,043 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	27,318,430 - 27,344,622 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	25,662,913 - 25,689,103 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	26,478,777 - 26,505,225 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	26,478,315 - 26,504,738 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	28,399,829 - 28,427,084 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	31,910,886 - 31,938,409 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	25,490,154 - 25,516,553 (+)	NCBI		Celera
RGSC_v3.1	17	31,913,843 - 31,940,009 (+)	NCBI
Cytogenetic Map	17	p12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-dinitrotoluene (EXP)

2-methylcholine (ISO)

4,4'-sulfonyldiphenol (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

aflatoxin M1 (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

choline (ISO)

copper(II) sulfate (ISO)

crocidolite asbestos (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

fenthion (ISO)

fipronil (EXP)

folic acid (ISO)

gentamycin (EXP)

GSK-J4 (ISO)

indole-3-methanol (EXP)

inulin (ISO)

L-methionine (ISO)

methylmercury chloride (ISO)

paracetamol (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

quinolin-8-ol (ISO)

resveratrol (ISO)

SB 431542 (ISO)

sunitinib (ISO)

titanium dioxide (ISO)

trichostatin A (ISO)

triphenyl phosphate (ISO)

tunicamycin (ISO)

valproic acid (ISO)

zidovudine (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

3'-phospho-5'-adenylyl sulfate transmembrane transport (IEA)

3'-phosphoadenosine 5'-phosphosulfate transport (IBA)

5'-adenylyl sulfate transmembrane transport (IEA,ISO)

peptidyl-tyrosine sulfation (ISO)

transmembrane transport (IBA,IEA)

Cellular Component

endoplasmic reticulum membrane (IBA)

Golgi membrane (IBA,IEA,ISO)

membrane (IEA)

trans-Golgi network (IEA,ISO)

Molecular Function

3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity (IBA,IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:14651853

Genomics

Comparative Map Data

Slc35b3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	26,052,249 - 26,078,686 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	26,052,232 - 26,079,505 (+)	Ensembl				GRCr8
mRatBN7.2	17	25,846,590 - 25,873,115 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	25,846,748 - 25,872,557 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	25,714,852 - 25,741,043 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	27,318,430 - 27,344,622 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	25,662,913 - 25,689,103 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	26,478,777 - 26,505,225 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	26,478,315 - 26,504,738 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	28,399,829 - 28,427,084 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	31,910,886 - 31,938,409 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	25,490,154 - 25,516,553 (+)	NCBI		Celera
RGSC_v3.1	17	31,913,843 - 31,940,009 (+)	NCBI
Cytogenetic Map	17	p12	NCBI

SLC35B3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	8,411,435 - 8,435,567 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	8,411,435 - 8,435,983 (-)	Ensembl			hg38	GRCh38
GRCh37	6	8,411,668 - 8,435,800 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	8,358,306 - 8,380,624 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	6	8,358,305 - 8,380,624	NCBI
Celera	6	9,642,577 - 9,665,073 (-)	NCBI		Celera
Cytogenetic Map	6	p24.3	NCBI
HuRef	6	8,290,537 - 8,313,030 (-)	NCBI		HuRef
CHM1_1	6	8,415,413 - 8,437,924 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	8,280,719 - 8,304,851 (-)	NCBI		T2T-CHM13v2.0

Slc35b3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	39,116,112 - 39,144,855 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	39,116,112 - 39,144,851 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	13	38,932,132 - 38,960,879 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	38,932,136 - 38,960,875 (-)	Ensembl			mm10	GRCm38
MGSCv37	13	39,024,009 - 39,052,744 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	13	38,939,606 - 38,967,998 (-)	NCBI		MGSCv36	mm8
Celera	13	40,055,504 - 40,084,226 (-)	NCBI		Celera
Cytogenetic Map	13	A3.3	NCBI
cM Map	13	18.61	NCBI

Slc35b3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955465	5,599,728 - 5,621,031 (+)	Ensembl
ChiLan1.0	NW_004955465	5,599,728 - 5,621,031 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLC35B3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	23,057,723 - 23,080,233 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	19,050,892 - 19,073,435 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	8,251,564 - 8,274,077 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	8,536,041 - 8,558,547 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	8,536,041 - 8,558,512 (-)	Ensembl			panPan2	panpan1.1

SLC35B3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	35	8,306,661 - 8,332,882 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	35	8,306,886 - 8,332,293 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	35	8,314,450 - 8,340,716 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	35	8,395,435 - 8,421,508 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	35	8,395,436 - 8,420,906 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	35	8,237,161 - 8,263,238 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	35	8,280,130 - 8,306,416 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	35	9,606,460 - 9,632,662 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Slc35b3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	15,950,529 - 15,973,175 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936534	4,220,274 - 4,242,314 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936534	4,219,557 - 4,242,152 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC35B3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	5,579,152 - 5,606,531 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	5,577,410 - 5,606,575 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	5,785,506 - 5,810,271 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC35B3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	63,719,442 - 63,744,216 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	63,720,612 - 63,744,258 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666044	8,411,428 - 8,436,207 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc35b3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624756	17,270,939 - 17,292,601 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624756	17,270,910 - 17,293,308 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Slc35b3
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	14	57,983,298 - 58,008,710 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Slc35b3
84 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	16
Count of miRNA genes:	16
Interacting mature miRNAs:	16
Transcripts:	ENSRNOT00000021669
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1354581	Bp247	Blood pressure QTL 247	4.5		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	17	1	43999106	Rat
2300002	Iddm36	Insulin dependent diabetes mellitus QTL 36	1.98		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	17	9266755	40968173	Rat
2293664	Bmd28	Bone mineral density QTL 28	5.1	0.0001	femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	17	4360057	27233623	Rat
8552966	Pigfal18	Plasma insulin-like growth factor 1 level QTL 18	8.7		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	17	12860942	57860942	Rat
152023626	Bp403	Blood pressure QTL 403	3.86		arterial blood pressure trait (VT:2000000)		17	24136127	84432719	Rat
1300123	Bp194	Blood pressure QTL 194	2.82		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	2120843	42054133	Rat
2302377	Scl61	Serum cholesterol level QTL 61	4.36		blood HDL cholesterol amount (VT:0000184)	serum high density lipoprotein cholesterol level (CMO:0000361)	17	6221998	58177198	Rat
70157	Niddm32	Non-insulin dependent diabetes mellitus QTL 32	4.34		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	17	22660799	55604694	Rat
9589151	Insul30	Insulin level QTL 30	8.82	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	17	12860942	57860942	Rat
1354628	Stl13	Serum triglyceride level QTL 13	3.8		blood triglyceride amount (VT:0002644)	blood triglyceride level (CMO:0000118)	17	21498994	50592236	Rat
10401807	Kidm52	Kidney mass QTL 52			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	17	1	31706603	Rat
10054088	Scort28	Serum corticosterone level QTL 28	2.04	0.0102	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	17	4733534	49733534	Rat
61394	Bp8	Blood pressure QTL 8	2.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	17	23286322	64246472	Rat
9589057	Scfw6	Subcutaneous fat weight QTL 6	8.62	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	17	12860942	57860942	Rat
9590154	Scort9	Serum corticosterone level QTL 9	23.57	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	17	12860942	57860942	Rat
10450503	Bp386	Blood pressure QTL 386		0.28	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	22019705	67019705	Rat
1559055	Bp278	Blood pressure QTL 278		0.04	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	23858926	68858926	Rat
152025238	Slep14	Serum leptin concentration QTL 14	4.62		blood leptin amount (VT:0005667)		17	24390595	84432719	Rat
9590088	Insglur7	Insulin/glucose ratio QTL 7	20.38	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	17	12860942	57860942	Rat
1331720	Rf43	Renal function QTL 43	2.881		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	17	15537025	28637951	Rat
2317053	Aia25	Adjuvant induced arthritis QTL 25	2.69		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	17	10604694	55604694	Rat
1354613	Kidm14	Kidney mass QTL 14	6.2		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	17	1	36045694	Rat
1331765	Hrtrt15	Heart rate QTL 15	4.094		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	17	15537025	60531414	Rat
7411666	Foco31	Food consumption QTL 31	11.4	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	17	12860942	57860942	Rat
2303627	Vencon8	Ventilatory control QTL 8		0.001	respiration trait (VT:0001943)	tidal volume (CMO:0000222)	17	4733534	49733534	Rat
12903980	Cm120	Cardiac mass QTL 120		0.002	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	17	23858926	68858926	Rat
70184	BpQTLcluster14	Blood pressure QTL cluster 14	3.38		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	17	8574342	32199534	Rat
12903981	Am17	Aortic mass QTL 17		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	17	23858926	68858926	Rat
12903982	Kidm70	Kidney mass QTL 70		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	17	23858926	68858926	Rat
631207	Niddm41	Non-insulin dependent diabetes mellitus QTL 41			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	17	1	38037084	Rat
12903978	Cm118	Cardiac mass QTL 118		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	17	23858926	68858926	Rat
12903979	Cm119	Cardiac mass QTL 119		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	17	23858926	68858926	Rat
1354662	Rf49	Renal function QTL 49	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	17	1	43999106	Rat
2293648	Bmd31	Bone mineral density QTL 31	4.5	0.0001	femur size trait (VT:1000369)	femoral neck cortical cross-sectional area (CMO:0001702)	17	4360057	27233623	Rat
152023740	Bp406	Blood pressure QTL 406	6.06		arterial blood pressure trait (VT:2000000)		17	24136127	84432719	Rat
7488966	Bp370	Blood pressure QTL 370		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	23858926	68858926	Rat
1354658	Spl8	Serum phospholipid level QTL 8	3.8		blood VLDL phospholipid amount (VT:0010507)	blood very low density lipoprotein phospholipid level (CMO:0001571)	17	1	43999106	Rat
152023737	Bp405	Blood pressure QTL 405	5.06		arterial blood pressure trait (VT:2000000)			24136127	84432719	Rat
152023736	Bp404	Blood pressure QTL 404	3.78		arterial blood pressure trait (VT:2000000)		17	24136127	84432719	Rat

Markers in Region

AU048489

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	25,848,519 - 25,848,728 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	26,480,633 - 26,480,841	NCBI	Rnor6.0
Rnor_5.0	17	28,401,673 - 28,401,881	UniSTS	Rnor5.0
RGSC_v3.4	17	31,912,646 - 31,912,854	UniSTS	RGSC3.4
Celera	17	25,492,012 - 25,492,220	UniSTS
Cytogenetic Map	17	p12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107346	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001063451	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003752960	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222368	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222370	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222373	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222374	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253850	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253852	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253853	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253855	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096462	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096463	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096464	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096465	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096466	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096467	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096468	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096469	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096470	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096471	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276387	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276388	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276389	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_225253	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005495896	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005495897	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005495898	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005495901	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010058863	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010058864	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010058865	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_596708	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_598111	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473977	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000021669 ⟹ ENSRNOP00000021670

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	26,052,232 - 26,079,505 (+)	Ensembl
mRatBN7.2 Ensembl	17	25,846,748 - 25,872,557 (+)	Ensembl
Rnor_6.0 Ensembl	17	26,478,315 - 26,504,738 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000112405 ⟹ ENSRNOP00000089959

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	26,052,466 - 26,079,505 (+)	Ensembl
mRatBN7.2 Ensembl	17	25,846,890 - 25,872,557 (+)	Ensembl

RefSeq Acc Id:

NM_001107346 ⟹ NP_001100816

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,453 - 26,078,686 (+)	NCBI
mRatBN7.2	17	25,846,879 - 25,873,115 (+)	NCBI

RefSeq Acc Id:

XM_006253850 ⟹ XP_006253912

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,478 - 26,078,686 (+)	NCBI
mRatBN7.2	17	25,846,869 - 25,873,115 (+)	NCBI
Rnor_6.0	17	26,479,055 - 26,505,225 (+)	NCBI
Rnor_5.0	17	28,399,829 - 28,427,084 (+)	NCBI

Sequence:

show sequence

AGAGAGCAGGACCGGAGACAGGTGGATGCGGAGGAGGTGACAGCGGCTGAGCTGGGAGGGGGCC
TTGCCGCGCGGTCAGGCGTCGTTAGGCAGCACTCGGGCCCAGCCAGCAAGACGGGGCCCAGCAG
TGGAGAAGAGCAGAGACAAGGTTGCAGGCCTTGAATGCGGCAAAGCAGAAACCATGGACCTCAA
GTTCAACAACTCCAGGAAGTATGTCTCCATCACTGTGCCCTCCAAAACCCAGACAATGTCGCCA
CACATCAAGTCGGTTGAGGACGTCGTGGTGCTGGGCGTGAACCTCAGCAGGTTTAAGAAGCTCA
CACAGTTTCTCATATGTGTGGCTGGAGTTTTTGTGTTTTACCTAATTTATGGATACTTACAGGA
GTTGATATTTTCAATGGAAGGCTTTAAGCCTTACGGCTGGTACCTTACTTTAGTACAGTTTGCA
TTTTACTCTGTATTTGGCCTAATAGAACTCCAGCTCACTCAGGACAAAAGGAGAAGAATACCAG
GAAAAACCTACATGATAATAGCTTTTCTAACTGTGGGTACTATGGGCTTATCAAACACTTCCTT
GGGCTACCTGAATTACCCAACCCAAGTCATCTTCAAGTGCTGCAAACTGATTCCTGTTATGCTA
GGAGGAGTTTTTATTCAAGGAAAGAGGTACAACCTTGCAGACGTGTCCGCTGCAGTGTGCATGA
GCCTTGGCCTGATCTGGTTTACCCTTGCTGACAGCACAATTGCACCAAACTTTAATCTGACAGG
TGTGATGCTTATCTCCCTGGCACTGTGTGCAGATGCTGTCATTGGGAACGTTCAGGAGAAAGCT
ATGAAACTGCACAATGCTTCCAACTCCGAGATGGTTTTGTATTCGTACTCAATCGGTTTTGTGT
ACATTCTGTTGGGATTGTCATGCACCAGTGGACTGGGTCCTGCACTGGCATTTTGTTCAAAGAA
CCCTGTTCGGACTTATGGCTATGCCTTCCTGTTTTCCCTCACTGGTTACTTTGGAATCTCCTTT
GTTCTGGCCCTCATTAAAATCTTTGGTGCTCTTCTGGCTGTAACAGTGACAACAGGACGAAAAG
CAATGACCATCGTCCTGTCCTTTCTGTTCTTTGCTAAGCCATTCACATTTCAGTATATATGGTC
TGGCTTGCTAGTTGTCCTTGGCATATTTCTGAATGTTTACAGCAAAAATATGGATAAAATAAGA
TTGCCCTCGGTGTACAGTGTGATAAAGAAAGCCATGGACATGAAAAAGTCAAGAACGTTGGCAC
AGACTGTGTAGGAACTGTGTTCGCCTATGTAAAATAAAAGTCTGAGGGAACAATCATTAATCAA
CTCACTTTCCAAAGGCTTGTGGTAAAACCAAAGGATCTGAAGGCTGCTGTCGTCTGAGCAGGTC
GTACTCTCGGTGGTTCCTCGGCATCTGCCTCTACAGAACACACACTTTTGATCAGCTCCAAAAC
GATCAAGAGCCCACACCTAGGACATTTTGCAATAAAGTCAGTATGAAGGAAAGTGCTTCCTAGC
TGTCCTGAACATTTCACTGGAAGTGGACCGTGTTGCAAGACTGATTGGCAATCCGTCCGGCCTG
CAGCACGGTGCCGTGTAGTAGCACTGTTTGTCTCCATTCCGTTTCGGTGGTGTTATTTAAATTC
TTCTCTGTTATAAGAGTAACTGATGATTTGAAGTTTAGAGAAAATAGCATTCATTTATAAATAA
AATTATCCTGTGATTTTTTTTAAATGGCGTTTTAATAAAATTTGTTATTGAGGAGAATGGAGAC
AGGAAGAAGGGCTAATGTACACTTTAAAACATGGGTTTTTAAAGTTCAGAGAAAATAGCATTCA
TTTATAAATAAAGTTATCCTGTGATTTTTTTAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006253852 ⟹ XP_006253914

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,249 - 26,077,992 (+)	NCBI
mRatBN7.2	17	25,846,591 - 25,872,502 (+)	NCBI
Rnor_6.0	17	26,478,777 - 26,504,563 (+)	NCBI
Rnor_5.0	17	28,399,829 - 28,427,084 (+)	NCBI

Sequence:

show sequence

GCTGCTTAGATCCGGTTCGAACATTCTAAACTTGGTCTCCTTCCCACGCCTCGGCTAACGATCT
CCTTAAGTCAACTGGGACGCAGACTCTACCAGATGGACAGGACCCAACCTCAGAATACGGAGGA
GCATGCGCAAGAGGCCCAGCCAGCAAGACGGGGCCCAGCAGTGGAGAAGAGCAGAGACAAGGTT
GCAGGCCTTGAATGCGGCAAAGCAGAAACCATGGACCTCAAGTTCAACAACTCCAGGAAGTATG
TCTCCATCACTGTGCCCTCCAAAACCCAGACAATGTCGCCACACATCAAGTCGGTTGAGGACGT
CGTGGTGCTGGGCGTGAACCTCAGCAGGTTTAAGAAGCTCACACAGTTTCTCATATGTGTGGCT
GGAGTTTTTGTGTTTTACCTAATTTATGGATACTTACAGGAGTTGATATTTTCAATGGAAGGCT
TTAAGCCTTACGGCTGGTACCTTACTTTAGTACAGTTTGCATTTTACTCTGTATTTGGCCTAAT
AGAACTCCAGCTCACTCAGGACAAAAGGAGAAGAATACCAGGAAAAACCTACATGATAATAGCT
TTTCTAACTGTGGGTACTATGGGCTTATCAAACACTTCCTTGGGCTACCTGAATTACCCAACCC
AAGTCATCTTCAAGTGCTGCAAACTGATTCCTGTTATGCTAGGAGGAGTTTTTATTCAAGGAAA
GAGGTACAACCTTGCAGACGTGTCCGCTGCAGTGTGCATGAGCCTTGGCCTGATCTGGTTTACC
CTTGCTGACAGCACAATTGCACCAAACTTTAATCTGACAGGTGTGATGCTTATCTCCCTGGCAC
TGTGTGCAGATGCTGTCATTGGGAACGTTCAGGAGAAAGCTATGAAACTGCACAATGCTTCCAA
CTCCGAGATGGTTTTGTATTCGTACTCAATCGGTTTTGTGTACATTCTGTTGGGATTGTCATGC
ACCAGTGGACTGGGTCCTGCACTGGCATTTTGTTCAAAGAACCCTGTTCGGACTTATGGCTATG
CCTTCCTGTTTTCCCTCACTGGTTACTTTGGAATCTCCTTTGTTCTGGCCCTCATTAAAATCTT
TGGTGCTCTTCTGGCTGTAACAGTGACAACAGGACGAAAAGCAATGACCATCGTCCTGTCCTTT
CTGTTCTTTGCTAAGCCATTCACATTTCAGTGGTCCTGGGGTGTATGAGGAAAGCTAACTACGC
AGGCCAGAAAGACCAAACAGGTATATATGGTCTGGCTTGCTAGTTGTCCTTGGCATATTTCTGA
ATGTTTACAGCAAAAATATGGATAAAATAAGATTGCCCTCGGTGTACA

hide sequence

RefSeq Acc Id:

XM_006253853 ⟹ XP_006253915

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,249 - 26,078,686 (+)	NCBI
mRatBN7.2	17	25,846,591 - 25,873,115 (+)	NCBI
Rnor_6.0	17	26,478,777 - 26,503,128 (+)	NCBI
Rnor_5.0	17	28,399,829 - 28,427,084 (+)	NCBI

Sequence:

show sequence

GCTGCTTAGATCCGGTTCGAACATTCTAAACTTGGTCTCCTTCCCACGCCTCGGCTAACGATCT
CCTTAAGTCAACTGGGACGCAGACTCTACCAGATGGACAGGACCCAACCTCAGAATACGGAGGA
GCATGCGCAAGAGGCCCAGCCAGCAAGACGGGGCCCAGCAGTGGAGAAGAGCAGAGACAAGGTT
GCAGGCCTTGAATGCGGCAAAGCAGAAACCATGGACCTCAAGTTCAACAACTCCAGGAAGTATG
TCTCCATCACTGTGCCCTCCAAAACCCAGACAATGTCGCCACACATCAAGTCGGTTGAGGACGT
CGTGGTGCTGGGCGTGAACCTCAGCAGGTTTAAGAAGCTCACACAGTTTCTCATATGTGTGGCT
GGAGTTTTTGTGTTTTACCTAATTTATGGATACTTACAGGAGTTGATATTTTCAATGGAAGGCT
TTAAGCCTTACGGCTGGTACCTTACTTTAGTACAGTTTGCATTTTACTCTGTATTTGGCCTAAT
AGAACTCCAGCTCACTCAGGACAAAAGGAGAAGAATACCAGGAAAAACCTACATGATAATAGCT
TTTCTAACTGTGGGTACTATGGGCTTATCAAACACTTCCTTGGGCTACCTGAATTACCCAACCC
AAGTCATCTTCAAGTGCTGCAAACTGATTCCTGTTATGCTAGGAGGAGTTTTTATTCAAGGAAA
GAGGTACAACCTTGCAGACGTGTCCGCTGCAGTGTGCATGAGCCTTGGCCTGATCTGGTTTACC
CTTGCTGACAGCACAATTGCACCAAACTTTAATCTGACAGGTGTGATGCTTATCTCCCTGGCAC
TGTGTGCAGATGCTGTCATTGGGAACGTTCAGGAGAAAGCTATGAAACTGCACAATGCTTCCAA
CTCCGAGATGGTTTTGTATTCGTACTCAATCGGTTTTGTGTACATTCTGTTGGGATTGTCATGC
ACCAGTGGACTGGGTCCTGCACTGGCATTTTGTTCAAAGAACCCTGTTCGGACTTATGGCTATG
CCTTCCTGTTTTCCCTCACTGGTTACTTTGGAATCTCCTTTGTTCTGGCCCTCATTAAAATCTT
TGGTGCTCTTCTGGCTGTAACAGCAGTGATGAGGATGTCATTGTCCAGCCTGTAGAGGACTGAA
GGTTGCCTTTGATGTATTTGGAGAGATGGGGAGCAGAGTGGGAGGAACCAGTGACTGCTGCATC
GTTTCCCAGAGCTGTAGATGCACACCGGCTTCCATGATAGAGGCAGAAAGGTTTTACTGTCTAA
TAAAAGGCAGAGGAAGGAATAGCTAACACAGAGCCCTTCCTGTGTGCTAGACACCATTTTGGGT
GAGTCCTAACCAGCTGGCACCATATGCACAGATAACGTGAGTATGGAGAGGTAAAGCAGCTCAC
GTGACAGCCTGCTGGAGTCGGGGTTCAGGCAGCACCCCGGCTCCATGCTGCTGTCTTCACCGTG
CTCCCTTGGTTAGGCCTCACTACCCTCCCTACCATCACAGCTTCCTGCCAGGCGGCTGCACGGA
GTCTGAGAATTTACAAGACATACAGTCCTCCCTCTGTGGAAACTTTCTAGGATGCTGCACTCCT
CAAAACAACACAGCTACCCATATTTTCCTGGCCACAGCCTAAGTCACATGACCACACCTAAGTA
TAGGGAAGACTTCTGACATGTGTGCCCAGAACAAGTTCTTCAGTCACTCACGCTTGAATGTCAA
GTGCAAGGAGCAGGAAGGAATCTGTGAGACAAGGTCTGGGACTGAGAAAAGCAGTGGGAGGGTA
GAACGCTAGCATGGAGAGCTGTGTGGCTCCTCTTCTGTTTGCACTGAATTGGACAGTCTCAGGC
CTTACGGCAGAGGTTGATGGGTAATACCCAGAGTGGGAAGAAGAGTTAATACAAGTGTATAAAG
AGCAAGACTGTCACAACTACTGTCCTATCCACAGAGGTCACCATGCCTAAATCCTGTAAGTCAC
TGTAGTGAGCATGCCTGGAATCTCAATGGGATGGAGGTCAGAGCAGGATGAGCAAAACATGGCA
AGACCTGTCTCAGAAACAGACAGAATATCTGGGTACTAATGAACCTTCCACTATTTTAAAAGGA
TAACTGTAGGCATAAATTTTTTGTACCCTAATTTAAATAAGGGTTCAACCTCTTCTGTAGCCCA
CCGCCCAGCAGAGGTAGTAGAAGGGAAAGTTTAAGGCTATGGGGGAAGTGGACCTGGTCAGCCA
TAGTTCTTTGGGGACAAGCTCCGTCTTCTTGGGCAGCAGTTCAGTCCTGTAGCAAACACCAGTT
GAGATTCAGCAGCTGCAGACCAGTCCTCTAGGTAGGCAGACCCCAAGCAGCTGAAGAATCCTGA
AGAAAGCACTAGGCTTGCCCACCTGCCTGAGGTGAGACCACAGAAACGGCAAGCTGCTTTAGGA
AGCTTACGAGCAGTTCTTGGGCGAGTTTCTCTCAGGGGCAGCATTACCACAAGCTGAGCTCAAC
AACGCTATGTAAGGCGAACCAATACATGCTTGTCGTTAGTGAAGCAGAGAAACCAAACCAAGGC
TCAGTGCTTGTCCCCCACTGTGGGATCATAGTCCTACTCCTTCATCAAGTGTCCTTTCCTGTGT
CTGCTGTATCCACACATCCTTTCACCTGGTCTGCCTCAGGAAAACAGTCTTTGGAGTGTTTGCT
TTAGCAAGACATCCTTTCACCTGTGTGCCCCAGGAAAATACCATTTGATGTAACCAACTTGCCA
AAGAACTGGAAGTTCCCACTTCAGATAACCCTTGCTCTACCCAGTAATTTCTTATACTGGAAAG
CCTGTGCTGAGGCAGCTGATGAACACTTACTACAGTTGTACACAGACATTTGATGGATCAACGC
CAGTTCTCCAAACCTTTACTTCTGTGGCAGCATGAATTTGGTTGGTTGGTTGTATTGTTTCTGG
TATCTTGTCATATACAGAGCTATAAATATTTGTAGACAAATGGTTTCCAGATATTACCGCGGCA
GTAAGATGCATCTAACTCTTTTCCCTGCAGTGACAACAGGACGAAAAGCAATGACCATCGTCCT
GTCCTTTCTGTTCTTTGCTAAGCCATTCACATTTCAGTAAGTACTTTGTAATGTAAGGGTCTCA
AAGTTAGATACTGGATTTCATATTTTGTGTTAAACAGCAGTATTTTCTAACTTTTACTTTATGT
TAATTTATGTTAATATGTGTTAGCCTATTTTCCTCTACAAAGAATTCTATTCATCCTAATCTAT
CTACTAAGTGCCTTTTGATAGTTTAAGAATCTGTGGACATCATTTTATATACTTAAATTGACCA
GCTAAAGCCCAGTGGAAATGTGGTCTTGTTAGCAAGTGACTGCATGAGAAGGAAGTGTATGACA
GATGCAGAGTGGGTAAAAGGTACACATCAGTGTGACTGACTGGTAGTGGGGTGTGTGCACCAGT
GTGACCAAGTGGGAGTGAGGTATATGGTCCAGTGTGACTGACTGTTAATGAAGTGAGTATGTCA
ATGTGCTGATGAGAGTGGAGTGTCAGATACAGGATGACTGACTGACTGCGTGTTCCTCATGGCA
GTGAGAATGAGTAGTATGTGTGTGTTGAATAAATTGTTTTTCTTTCCCACTTGTATATATGTAA
ATTATGTTTAAAATTCATGCGTGTACATTTTTTGTTTATAGCTTCTTTCCAGAGCAATAAACAA

hide sequence

RefSeq Acc Id:

XM_006253854 ⟹ XP_006253916

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,249 - 26,078,686 (+)	NCBI
mRatBN7.2	17	25,846,592 - 25,873,115 (+)	NCBI
Rnor_6.0	17	26,478,777 - 26,503,128 (+)	NCBI
Rnor_5.0	17	28,399,829 - 28,427,084 (+)	NCBI

Sequence:

show sequence

GCTGCTTAGATCCGGTTCGAACATTCTAAACTTGGTCTCCTTCCCACGCCTCGGCTAACGATCT
CCTTAAGTCAACTGGGACGCAGACTCTACCAGATGGACAGGACCCAACCTCAGAATACGGAGGA
GCATGCGCAAGAGGCCCAGCCAGCAAGACGGGGCCCAGCAGTGGAGAAGAGCAGAGACAAGGTT
GCAGGCCTTGAATGCGGCAAAGCAGAAACCATGGACCTCAAGTTCAACAACTCCAGGAAGTATG
TCTCCATCACTGTGCCCTCCAAAACCCAGACAATGTCGCCACACATCAAGTCGGTTGAGGACGT
CGTGGTGCTGGGCGTGAACCTCAGCAGGTTTAAGAAGCTCACACAGTTTCTCATATGTGTGGCT
GGAGTTTTTGTGTTTTACCTAATTTATGGATACTTACAGGAGTTGATATTTTCAATGGAAGGCT
TTAAGCCTTACGGCTGGTACCTTACTTTAGTACAGTTTGCATTTTACTCTGTATTTGGCCTAAT
AGAACTCCAGCTCACTCAGGACAAAAGGAGAAGAATACCAGGAAAAACCTACATGATAATAGCT
TTTCTAACTGTGGGTACTATGGGCTTATCAAACACTTCCTTGGGCTACCTGAATTACCCAACCC
AAGTCATCTTCAAGTGCTGCAAACTGATTCCTGTTATGCTAGGAGGAGTTTTTATTCAAGGAAA
GAGGTACAACCTTGCAGACGTGTCCGCTGCAGTGTGCATGAGCCTTGGCCTGATCTGGTTTACC
CTTGCTGACAGCACAATTGCACCAAACTTTAATCTGACAGGTGTGATGCTTATCTCCCTGGCAC
TGTGTGCAGATGCTGTCATTGGGAACGTTCAGGAGAAAGCTATGAAACTGCACAATGCTTCCAA
CTCCGAGATGGTTTTGTATTCGTACTCAATCGGTTTTGTGTACATTCTGTTGGGATTGTCATGC
ACCAGTGGACTGGGTCCTGCACTGGCATTTTGTTCAAAGAACCCTGTTCGGACTTATGGCTATG
CCTTCCTGTTTTCCCTCACTGGTTACTTTGGAATCTCCTTTGTTCTGGCCCTCATTAAAATCTT
TGGTGCTCTTCTGGCTGTAACAGTGATGAGGATGTCATTGTCCAGCCTGTAGAGGACTGAAGGT
TGCCTTTGATGTATTTGGAGAGATGGGGAGCAGAGTGGGAGGAACCAGTGACTGCTGCATCGTT
TCCCAGAGCTGTAGATGCACACCGGCTTCCATGATAGAGGCAGAAAGGTTTTACTGTCTAATAA
AAGGCAGAGGAAGGAATAGCTAACACAGAGCCCTTCCTGTGTGCTAGACACCATTTTGGGTGAG
TCCTAACCAGCTGGCACCATATGCACAGATAACGTGAGTATGGAGAGGTAAAGCAGCTCACGTG
ACAGCCTGCTGGAGTCGGGGTTCAGGCAGCACCCCGGCTCCATGCTGCTGTCTTCACCGTGCTC
CCTTGGTTAGGCCTCACTACCCTCCCTACCATCACAGCTTCCTGCCAGGCGGCTGCACGGAGTC
TGAGAATTTACAAGACATACAGTCCTCCCTCTGTGGAAACTTTCTAGGATGCTGCACTCCTCAA
AACAACACAGCTACCCATATTTTCCTGGCCACAGCCTAAGTCACATGACCACACCTAAGTATAG
GGAAGACTTCTGACATGTGTGCCCAGAACAAGTTCTTCAGTCACTCACGCTTGAATGTCAAGTG
CAAGGAGCAGGAAGGAATCTGTGAGACAAGGTCTGGGACTGAGAAAAGCAGTGGGAGGGTAGAA
CGCTAGCATGGAGAGCTGTGTGGCTCCTCTTCTGTTTGCACTGAATTGGACAGTCTCAGGCCTT
ACGGCAGAGGTTGATGGGTAATACCCAGAGTGGGAAGAAGAGTTAATACAAGTGTATAAAGAGC
AAGACTGTCACAACTACTGTCCTATCCACAGAGGTCACCATGCCTAAATCCTGTAAGTCACTGT
AGTGAGCATGCCTGGAATCTCAATGGGATGGAGGTCAGAGCAGGATGAGCAAAACATGGCAAGA
CCTGTCTCAGAAACAGACAGAATATCTGGGTACTAATGAACCTTCCACTATTTTAAAAGGATAA
CTGTAGGCATAAATTTTTTGTACCCTAATTTAAATAAGGGTTCAACCTCTTCTGTAGCCCACCG
CCCAGCAGAGGTAGTAGAAGGGAAAGTTTAAGGCTATGGGGGAAGTGGACCTGGTCAGCCATAG
TTCTTTGGGGACAAGCTCCGTCTTCTTGGGCAGCAGTTCAGTCCTGTAGCAAACACCAGTTGAG
ATTCAGCAGCTGCAGACCAGTCCTCTAGGTAGGCAGACCCCAAGCAGCTGAAGAATCCTGAAGA
AAGCACTAGGCTTGCCCACCTGCCTGAGGTGAGACCACAGAAACGGCAAGCTGCTTTAGGAAGC
TTACGAGCAGTTCTTGGGCGAGTTTCTCTCAGGGGCAGCATTACCACAAGCTGAGCTCAACAAC
GCTATGTAAGGCGAACCAATACATGCTTGTCGTTAGTGAAGCAGAGAAACCAAACCAAGGCTCA
GTGCTTGTCCCCCACTGTGGGATCATAGTCCTACTCCTTCATCAAGTGTCCTTTCCTGTGTCTG
CTGTATCCACACATCCTTTCACCTGGTCTGCCTCAGGAAAACAGTCTTTGGAGTGTTTGCTTTA
GCAAGACATCCTTTCACCTGTGTGCCCCAGGAAAATACCATTTGATGTAACCAACTTGCCAAAG
AACTGGAAGTTCCCACTTCAGATAACCCTTGCTCTACCCAGTAATTTCTTATACTGGAAAGCCT
GTGCTGAGGCAGCTGATGAACACTTACTACAGTTGTACACAGACATTTGATGGATCAACGCCAG
TTCTCCAAACCTTTACTTCTGTGGCAGCATGAATTTGGTTGGTTGGTTGTATTGTTTCTGGTAT
CTTGTCATATACAGAGCTATAAATATTTGTAGACAAATGGTTTCCAGATATTACCGCGGCAGTA
AGATGCATCTAACTCTTTTCCCTGCAGTGACAACAGGACGAAAAGCAATGACCATCGTCCTGTC
CTTTCTGTTCTTTGCTAAGCCATTCACATTTCAGTAAGTACTTTGTAATGTAAGGGTCTCAAAG
TTAGATACTGGATTTCATATTTTGTGTTAAACAGCAGTATTTTCTAACTTTTACTTTATGTTAA
TTTATGTTAATATGTGTTAGCCTATTTTCCTCTACAAAGAATTCTATTCATCCTAATCTATCTA
CTAAGTGCCTTTTGATAGTTTAAGAATCTGTGGACATCATTTTATATACTTAAATTGACCAGCT
AAAGCCCAGTGGAAATGTGGTCTTGTTAGCAAGTGACTGCATGAGAAGGAAGTGTATGACAGAT
GCAGAGTGGGTAAAAGGTACACATCAGTGTGACTGACTGGTAGTGGGGTGTGTGCACCAGTGTG
ACCAAGTGGGAGTGAGGTATATGGTCCAGTGTGACTGACTGTTAATGAAGTGAGTATGTCAATG
TGCTGATGAGAGTGGAGTGTCAGATACAGGATGACTGACTGACTGCGTGTTCCTCATGGCAGTG
AGAATGAGTAGTATGTGTGTGTTGAATAAATTGTTTTTCTTTCCCACTTGTATATATGTAAATT
ATGTTTAAAATTCATGCGTGTACATTTTTTGTTTATAGCTTCTTTCCAGAGCAATAAACAA

hide sequence

RefSeq Acc Id:

XM_006253855 ⟹ XP_006253917

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,634 - 26,078,686 (+)	NCBI
mRatBN7.2	17	25,847,054 - 25,873,115 (+)	NCBI
Rnor_6.0	17	26,479,183 - 26,505,225 (+)	NCBI
Rnor_5.0	17	28,399,829 - 28,427,084 (+)	NCBI

Sequence:

show sequence

AGGTGTCGGACGCCGCCGTCGGAGTTGTCAGGGGTAGCAGGGGCGCGCGCTTCCAGGAAGAGCA
TCCTCCCCTCCTGGCCTGAGAACCCCAGCCCGCACTCCTGTAGCCTGCTCTCCGTGCTCAGAGA
CTCGGTCTCTCGGATTCCCTTGACTGTGTTTGCAGTTCAGAGCCACTTCCGGGCCCAGCCAGCA
AGACGGGGCCCAGCAGTGGAGAAGAGCAGAGACAAGGTTGCAGGCCTTGAATGCGGCAAAGCAG
AAACCATGGACCTCAAGTTCAACAACTCCAGGAAGTATGTCTCCATCACTGTGCCCTCCAAAAC
CCAGACAATGTCGCCACACATCAAGTCGGTTGAGGACGTCGTGGTGCTGGGCGTGAACCTCAGC
AGGTTTAAGAAGCTCACACAGTTTCTCATATGTGTGGCTGGAGTTTTTGTGTTTTACCTAATTT
ATGGATACTTACAGGAGTTGATATTTTCAATGGAAGGCTTTAAGCCTTACGGCTGGTACCTTAC
TTTAGTACAGTTTGCATTTTACTCTGTATTTGGCCTAATAGAACTCCAGCTCACTCAGGACAAA
AGGAGAAGAATACCAGGAAAAACCTACATGATAATAGCTTTTCTAACTGTGGGTACTATGGGCT
TATCAAACACTTCCTTGGGCTACCTGAATTACCCAACCCAAGTCATCTTCAAGTGCTGCAAACT
GATTCCTGTTATGCTAGGAGGAGTTTTTATTCAAGGAAAGAGGTACAACCTTGCAGACGTGTCC
GCTGCAGTGTGCATGAGCCTTGGCCTGATCTGGTTTACCCTTGCTGACAGCACAATTGCACCAA
ACTTTAATCTGACAGGTGTGATGCTTATCTCCCTGGCACTGTGTGCAGATGCTGTCATTGGGAA
CGTTCAGGAGAAAGCTATGAAACTGCACAATGCTTCCAACTCCGAGATGGTTTTGTATTCGTAC
TCAATCGGTTTTGTGTACATTCTGTTGGGATTGTCATGCACCAGTGGACTGGGTCCTGCACTGG
CATTTTGTTCAAAGAACCCTGTTCGGACTTATGGCTATGCCTTCCTGTTTTCCCTCACTGGTTA
CTTTGGAATCTCCTTTGTTCTGGCCCTCATTAAAATCTTTGGTGCTCTTCTGGCTGTAACAGTG
ACAACAGGACGAAAAGCAATGACCATCGTCCTGTCCTTTCTGTTCTTTGCTAAGCCATTCACAT
TTCAGTATATATGGTCTGGCTTGCTAGTTGTCCTTGGCATATTTCTGAATGTTTACAGCAAAAA
TATGGATAAAATAAGATTGCCCTCGGTGTACAGTGTGATAAAGAAAGCCATGGACATGAAAAAG
TCAAGAACGTTGGCACAGACTGTGTAGGAACTGTGTTCGCCTATGTAAAATAAAAGTCTGAGGG
AACAATCATTAATCAACTCACTTTCCAAAGGCTTGTGGTAAAACCAAAGGATCTGAAGGCTGCT
GTCGTCTGAGCAGGTCGTACTCTCGGTGGTTCCTCGGCATCTGCCTCTACAGAACACACACTTT
TGATCAGCTCCAAAACGATCAAGAGCCCACACCTAGGACATTTTGCAATAAAGTCAGTATGAAG
GAAAGTGCTTCCTAGCTGTCCTGAACATTTCACTGGAAGTGGACCGTGTTGCAAGACTGATTGG
CAATCCGTCCGGCCTGCAGCACGGTGCCGTGTAGTAGCACTGTTTGTCTCCATTCCGTTTCGGT
GGTGTTATTTAAATTCTTCTCTGTTATAAGAGTAACTGATGATTTGAAGTTTAGAGAAAATAGC
ATTCATTTATAAATAAAATTATCCTGTGATTTTTTTTAAATGGCGTTTTAATAAAATTTGTTAT
TGAGGAGAATGGAGACAGGAAGAAGGGCTAATGTACACTTTAAAACATGGGTTTTTAAAGTTCA
GAGAAAATAGCATTCATTTATAAATAAAGTTATCCTGTGATTTTTTTAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006253856 ⟹ XP_006253918

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,415 - 26,078,686 (+)	NCBI
mRatBN7.2	17	25,846,825 - 25,873,115 (+)	NCBI
Rnor_6.0	17	26,478,969 - 26,505,225 (+)	NCBI
Rnor_5.0	17	28,399,829 - 28,427,084 (+)	NCBI

Sequence:

show sequence

GCGCAAAAAGACGCATAGGCGGAAGTGGCGCGAGGTGTCCGGCCTGTGGAGACCTTCCGGGAAG
GTGGCGGCCGAGGTGGCGGTCGAGAGAGCAGGACCGGAGACAGGCCCAGCCAGCAAGACGGGGC
CCAGCAGTGGAGAAGAGCAGAGACAAGGTTGCAGGCCTTGAATGCGGCAAAGCAGAAACCATGG
ACCTCAAGTTCAACAACTCCAGGAAGTATGTCTCCATCACTGTGCCCTCCAAAACCCAGACAAT
GTCGCCACACATCAAGTCGGTTGAGGACGTCGTGGTGCTGGGCGTGAACCTCAGCAGGTTTAAG
AAGCTCACACAGTTTCTCATATGTGTGGCTGGAGTTTTTGTGTTTTACCTAATTTATGGATACT
TACAGGAGTTGATATTTTCAATGGAAGGCTTTAAGCCTTACGGCTGGTACCTTACTTTAGTACA
GTTTGCATTTTACTCTGTATTTGGCCTAATAGAACTCCAGCTCACTCAGGACAAAAGGAGAAGA
ATACCAGGAAAAACCTACATGATAATAGCTTTTCTAACTGTGGGTACTATGGGCTTATCAAACA
CTTCCTTGGGCTACCTGAATTACCCAACCCAAGTCATCTTCAAGTGCTGCAAACTGATTCCTGT
TATGCTAGGAGGAGTTTTTATTCAAGGAAAGAGGTACAACCTTGCAGACGTGTCCGCTGCAGTG
TGCATGAGCCTTGGCCTGATCTGGTTTACCCTTGCTGACAGCACAATTGCACCAAACTTTAATC
TGACAGGTGTGATGCTTATCTCCCTGGCACTGTGTGCAGATGCTGTCATTGGGAACGTTCAGGA
GAAAGCTATGAAACTGCACAATGCTTCCAACTCCGAGATGGTTTTGTATTCGTACTCAATCGGT
TTTGTGTACATTCTGTTGGGATTGTCATGCACCAGTGGACTGGGTCCTGCACTGGCATTTTGTT
CAAAGAACCCTGTTCGGACTTATGGCTATGCCTTCCTGTTTTCCCTCACTGGTTACTTTGGAAT
CTCCTTTGTTCTGGCCCTCATTAAAATCTTTGGTGCTCTTCTGGCTGTAACAGTGACAACAGGA
CGAAAAGCAATGACCATCGTCCTGTCCTTTCTGTTCTTTGCTAAGCCATTCACATTTCAGTATA
TATGGTCTGGCTTGCTAGTTGTCCTTGGCATATTTCTGAATGTTTACAGCAAAAATATGGATAA
AATAAGATTGCCCTCGGTGTACAGTGTGATAAAGAAAGCCATGGACATGAAAAAGTCAAGAACG
TTGGCACAGACTGTGTAGGAACTGTGTTCGCCTATGTAAAATAAAAGTCTGAGGGAACAATCAT
TAATCAACTCACTTTCCAAAGGCTTGTGGTAAAACCAAAGGATCTGAAGGCTGCTGTCGTCTGA
GCAGGTCGTACTCTCGGTGGTTCCTCGGCATCTGCCTCTACAGAACACACACTTTTGATCAGCT
CCAAAACGATCAAGAGCCCACACCTAGGACATTTTGCAATAAAGTCAGTATGAAGGAAAGTGCT
TCCTAGCTGTCCTGAACATTTCACTGGAAGTGGACCGTGTTGCAAGACTGATTGGCAATCCGTC
CGGCCTGCAGCACGGTGCCGTGTAGTAGCACTGTTTGTCTCCATTCCGTTTCGGTGGTGTTATT
TAAATTCTTCTCTGTTATAAGAGTAACTGATGATTTGAAGTTTAGAGAAAATAGCATTCATTTA
TAAATAAAATTATCCTGTGATTTTTTTTAAATGGCGTTTTAATAAAATTTGTTATTGAGGAGAA
TGGAGACAGGAAGAAGGGCTAATGTACACTTTAAAACATGGGTTTTTAAAGTTCAGAGAAAATA
GCATTCATTTATAAATAAAGTTATCCTGTGATTTTTTTAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039096462 ⟹ XP_038952390

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,249 - 26,078,686 (+)	NCBI
mRatBN7.2	17	25,846,591 - 25,873,115 (+)	NCBI

RefSeq Acc Id:

XM_039096463 ⟹ XP_038952391

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,249 - 26,073,223 (+)	NCBI
mRatBN7.2	17	25,846,591 - 25,867,652 (+)	NCBI

RefSeq Acc Id:

XM_039096464 ⟹ XP_038952392

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,249 - 26,078,686 (+)	NCBI
mRatBN7.2	17	25,846,590 - 25,873,115 (+)	NCBI

RefSeq Acc Id:

XM_039096465 ⟹ XP_038952393

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,249 - 26,078,686 (+)	NCBI
mRatBN7.2	17	25,846,590 - 25,873,115 (+)	NCBI

RefSeq Acc Id:

XM_039096466 ⟹ XP_038952394

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,249 - 26,078,686 (+)	NCBI
mRatBN7.2	17	25,846,591 - 25,873,115 (+)	NCBI

RefSeq Acc Id:

XM_039096467 ⟹ XP_038952395

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,249 - 26,073,223 (+)	NCBI
mRatBN7.2	17	25,846,590 - 25,867,652 (+)	NCBI

RefSeq Acc Id:

XM_039096468 ⟹ XP_038952396

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,410 - 26,073,223 (+)	NCBI
mRatBN7.2	17	25,846,825 - 25,867,652 (+)	NCBI

RefSeq Acc Id:

XM_039096469 ⟹ XP_038952397

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,058,607 - 26,078,686 (+)	NCBI
mRatBN7.2	17	25,853,034 - 25,873,115 (+)	NCBI

RefSeq Acc Id:

XM_039096470 ⟹ XP_038952398

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,058,607 - 26,078,686 (+)	NCBI
mRatBN7.2	17	25,853,034 - 25,873,115 (+)	NCBI

RefSeq Acc Id:

XM_039096471 ⟹ XP_038952399

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,058,607 - 26,078,686 (+)	NCBI
mRatBN7.2	17	25,853,034 - 25,873,115 (+)	NCBI

RefSeq Acc Id:

XM_063276387 ⟹ XP_063132457

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,411 - 26,078,686 (+)	NCBI

RefSeq Acc Id:

XM_063276388 ⟹ XP_063132458

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,415 - 26,073,223 (+)	NCBI

RefSeq Acc Id:

XM_063276389 ⟹ XP_063132459

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,410 - 26,073,223 (+)	NCBI

RefSeq Acc Id:

XM_225253 ⟹ XP_225253

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,249 - 26,078,686 (+)	NCBI
mRatBN7.2	17	25,846,593 - 25,873,115 (+)	NCBI
Rnor_6.0	17	26,478,777 - 26,505,225 (+)	NCBI
Rnor_5.0	17	28,399,829 - 28,427,084 (+)	NCBI
RGSC_v3.4	17	31,910,886 - 31,938,409 (+)	RGD

Sequence:

show sequence

GCTGCTTAGATCCGGTTCGAACATTCTAAACTTGGTCTCCTTCCCACGCCTCGGCTAACGATCT
CCTTAAGTCAACTGGGACGCAGACTCTACCAGATGGACAGGACCCAACCTCAGAATACGGAGGA
GCATGCGCAAGAGGCCCAGCCAGCAAGACGGGGCCCAGCAGTGGAGAAGAGCAGAGACAAGGTT
GCAGGCCTTGAATGCGGCAAAGCAGAAACCATGGACCTCAAGTTCAACAACTCCAGGAAGTATG
TCTCCATCACTGTGCCCTCCAAAACCCAGACAATGTCGCCACACATCAAGTCGGTTGAGGACGT
CGTGGTGCTGGGCGTGAACCTCAGCAGGTTTAAGAAGCTCACACAGTTTCTCATATGTGTGGCT
GGAGTTTTTGTGTTTTACCTAATTTATGGATACTTACAGGAGTTGATATTTTCAATGGAAGGCT
TTAAGCCTTACGGCTGGTACCTTACTTTAGTACAGTTTGCATTTTACTCTGTATTTGGCCTAAT
AGAACTCCAGCTCACTCAGGACAAAAGGAGAAGAATACCAGGAAAAACCTACATGATAATAGCT
TTTCTAACTGTGGGTACTATGGGCTTATCAAACACTTCCTTGGGCTACCTGAATTACCCAACCC
AAGTCATCTTCAAGTGCTGCAAACTGATTCCTGTTATGCTAGGAGGAGTTTTTATTCAAGGAAA
GAGGTACAACCTTGCAGACGTGTCCGCTGCAGTGTGCATGAGCCTTGGCCTGATCTGGTTTACC
CTTGCTGACAGCACAATTGCACCAAACTTTAATCTGACAGGTGTGATGCTTATCTCCCTGGCAC
TGTGTGCAGATGCTGTCATTGGGAACGTTCAGGAGAAAGCTATGAAACTGCACAATGCTTCCAA
CTCCGAGATGGTTTTGTATTCGTACTCAATCGGTTTTGTGTACATTCTGTTGGGATTGTCATGC
ACCAGTGGACTGGGTCCTGCACTGGCATTTTGTTCAAAGAACCCTGTTCGGACTTATGGCTATG
CCTTCCTGTTTTCCCTCACTGGTTACTTTGGAATCTCCTTTGTTCTGGCCCTCATTAAAATCTT
TGGTGCTCTTCTGGCTGTAACAGTGACAACAGGACGAAAAGCAATGACCATCGTCCTGTCCTTT
CTGTTCTTTGCTAAGCCATTCACATTTCAGTATATATGGTCTGGCTTGCTAGTTGTCCTTGGCA
TATTTCTGAATGTTTACAGCAAAAATATGGATAAAATAAGATTGCCCTCGGTGTACAGTGTGAT
AAAGAAAGCCATGGACATGAAAAAGTCAAGAACGTTGGCACAGACTGTGTAGGAACTGTGTTCG
CCTATGTAAAATAAAAGTCTGAGGGAACAATCATTAATCAACTCACTTTCCAAAGGCTTGTGGT
AAAACCAAAGGATCTGAAGGCTGCTGTCGTCTGAGCAGGTCGTACTCTCGGTGGTTCCTCGGCA
TCTGCCTCTACAGAACACACACTTTTGATCAGCTCCAAAACGATCAAGAGCCCACACCTAGGAC
ATTTTGCAATAAAGTCAGTATGAAGGAAAGTGCTTCCTAGCTGTCCTGAACATTTCACTGGAAG
TGGACCGTGTTGCAAGACTGATTGGCAATCCGTCCGGCCTGCAGCACGGTGCCGTGTAGTAGCA
CTGTTTGTCTCCATTCCGTTTCGGTGGTGTTATTTAAATTCTTCTCTGTTATAAGAGTAACTGA
TGATTTGAAGTTTAGAGAAAATAGCATTCATTTATAAATAAAATTATCCTGTGATTTTTTTTAA
ATGGCGTTTTAATAAAATTTGTTATTGAGGAGAATGGAGACAGGAAGAAGGGCTAATGTACACT
TTAAAACATGGGTTTTTAAAGTTCAGAGAAAATAGCATTCATTTATAAATAAAGTTATCCTGTG
ATTTTTTTAAAAAAA

hide sequence

RefSeq Acc Id:

XR_005495896

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,249 - 26,078,686 (+)	NCBI
mRatBN7.2	17	25,846,591 - 25,873,115 (+)	NCBI

RefSeq Acc Id:

XR_005495897

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,249 - 26,078,686 (+)	NCBI
mRatBN7.2	17	25,846,591 - 25,873,115 (+)	NCBI

RefSeq Acc Id:

XR_005495898

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,249 - 26,078,686 (+)	NCBI
mRatBN7.2	17	25,846,591 - 25,873,115 (+)	NCBI

RefSeq Acc Id:

XR_005495901

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,249 - 26,078,686 (+)	NCBI
mRatBN7.2	17	25,846,591 - 25,873,115 (+)	NCBI

RefSeq Acc Id:

XR_010058863

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,249 - 26,078,686 (+)	NCBI

RefSeq Acc Id:

XR_010058864

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,249 - 26,078,686 (+)	NCBI

RefSeq Acc Id:

XR_010058865

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	26,052,249 - 26,077,992 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100816	(Get FASTA)	NCBI Sequence Viewer
	XP_006253912	(Get FASTA)	NCBI Sequence Viewer
	XP_006253914	(Get FASTA)	NCBI Sequence Viewer
	XP_006253915	(Get FASTA)	NCBI Sequence Viewer
	XP_006253916	(Get FASTA)	NCBI Sequence Viewer
	XP_006253917	(Get FASTA)	NCBI Sequence Viewer
	XP_006253918	(Get FASTA)	NCBI Sequence Viewer
	XP_038952390	(Get FASTA)	NCBI Sequence Viewer
	XP_038952391	(Get FASTA)	NCBI Sequence Viewer
	XP_038952392	(Get FASTA)	NCBI Sequence Viewer
	XP_038952393	(Get FASTA)	NCBI Sequence Viewer
	XP_038952394	(Get FASTA)	NCBI Sequence Viewer
	XP_038952395	(Get FASTA)	NCBI Sequence Viewer
	XP_038952396	(Get FASTA)	NCBI Sequence Viewer
	XP_038952397	(Get FASTA)	NCBI Sequence Viewer
	XP_038952398	(Get FASTA)	NCBI Sequence Viewer
	XP_038952399	(Get FASTA)	NCBI Sequence Viewer
	XP_063132457	(Get FASTA)	NCBI Sequence Viewer
	XP_063132458	(Get FASTA)	NCBI Sequence Viewer
	XP_063132459	(Get FASTA)	NCBI Sequence Viewer
	XP_225253	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL98245	(Get FASTA)	NCBI Sequence Viewer
	EDL98246	(Get FASTA)	NCBI Sequence Viewer
	EDL98247	(Get FASTA)	NCBI Sequence Viewer
	EDL98248	(Get FASTA)	NCBI Sequence Viewer
	EDL98249	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000021670
	ENSRNOP00000021670.4
	ENSRNOP00000089959
	ENSRNOP00000089959.1

RefSeq Acc Id:	XP_225253 ⟸ XM_225253
- Peptide Label:	isoform X1
- UniProtKB:	D4AAG3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDRTQPQNTEEHAQEAQPARRGPAVEKSRDKVAGLECGKAETMDLKFNNSRKYVSITVPSKTQT MSPHIKSVEDVVVLGVNLSRFKKLTQFLICVAGVFVFYLIYGYLQELIFSMEGFKPYGWYLTLV QFAFYSVFGLIELQLTQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIP VMLGGVFIQGKRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVMLISLALCADAVIGNVQ EKAMKLHNASNSEMVLYSYSIGFVYILLGLSCTSGLGPALAFCSKNPVRTYGYAFLFSLTGYFG ISFVLALIKIFGALLAVTVTTGRKAMTIVLSFLFFAKPFTFQYIWSGLLVVLGIFLNVYSKNMD KIRLPSVYSVIKKAMDMKKSRTLAQTV hide sequence

RefSeq Acc Id:

XP_006253914 ⟸ XM_006253852

- Peptide Label:

isoform X3

- Sequence:

show sequence

MDRTQPQNTEEHAQEAQPARRGPAVEKSRDKVAGLECGKAETMDLKFNNSRKYVSITVPSKTQT
MSPHIKSVEDVVVLGVNLSRFKKLTQFLICVAGVFVFYLIYGYLQELIFSMEGFKPYGWYLTLV
QFAFYSVFGLIELQLTQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIP
VMLGGVFIQGKRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVMLISLALCADAVIGNVQ
EKAMKLHNASNSEMVLYSYSIGFVYILLGLSCTSGLGPALAFCSKNPVRTYGYAFLFSLTGYFG
ISFVLALIKIFGALLAVTVTTGRKAMTIVLSFLFFAKPFTFQWSWGV

hide sequence

RefSeq Acc Id:

XP_006253915 ⟸ XM_006253853

- Peptide Label:

isoform X4

- Sequence:

show sequence

MDRTQPQNTEEHAQEAQPARRGPAVEKSRDKVAGLECGKAETMDLKFNNSRKYVSITVPSKTQT
MSPHIKSVEDVVVLGVNLSRFKKLTQFLICVAGVFVFYLIYGYLQELIFSMEGFKPYGWYLTLV
QFAFYSVFGLIELQLTQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIP
VMLGGVFIQGKRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVMLISLALCADAVIGNVQ
EKAMKLHNASNSEMVLYSYSIGFVYILLGLSCTSGLGPALAFCSKNPVRTYGYAFLFSLTGYFG
ISFVLALIKIFGALLAVTAVMRMSLSSL

hide sequence

RefSeq Acc Id:

XP_006253916 ⟸ XM_006253854

- Peptide Label:

isoform X5

- Sequence:

show sequence

MDRTQPQNTEEHAQEAQPARRGPAVEKSRDKVAGLECGKAETMDLKFNNSRKYVSITVPSKTQT
MSPHIKSVEDVVVLGVNLSRFKKLTQFLICVAGVFVFYLIYGYLQELIFSMEGFKPYGWYLTLV
QFAFYSVFGLIELQLTQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIP
VMLGGVFIQGKRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVMLISLALCADAVIGNVQ
EKAMKLHNASNSEMVLYSYSIGFVYILLGLSCTSGLGPALAFCSKNPVRTYGYAFLFSLTGYFG
ISFVLALIKIFGALLAVTVMRMSLSSL

hide sequence

RefSeq Acc Id:	XP_006253918 ⟸ XM_006253856
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6ACP7 (UniProtKB/TrEMBL), A6J795 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDLKFNNSRKYVSITVPSKTQTMSPHIKSVEDVVVLGVNLSRFKKLTQFLICVAGVFVFYLIYG YLQELIFSMEGFKPYGWYLTLVQFAFYSVFGLIELQLTQDKRRRIPGKTYMIIAFLTVGTMGLS NTSLGYLNYPTQVIFKCCKLIPVMLGGVFIQGKRYNLADVSAAVCMSLGLIWFTLADSTIAPNF NLTGVMLISLALCADAVIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLSCTSGLGPALAF CSKNPVRTYGYAFLFSLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTIVLSFLFFAKPFTFQ YIWSGLLVVLGIFLNVYSKNMDKIRLPSVYSVIKKAMDMKKSRTLAQTV hide sequence

RefSeq Acc Id:	XP_006253912 ⟸ XM_006253850
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6ACP7 (UniProtKB/TrEMBL), A6J795 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDLKFNNSRKYVSITVPSKTQTMSPHIKSVEDVVVLGVNLSRFKKLTQFLICVAGVFVFYLIYG YLQELIFSMEGFKPYGWYLTLVQFAFYSVFGLIELQLTQDKRRRIPGKTYMIIAFLTVGTMGLS NTSLGYLNYPTQVIFKCCKLIPVMLGGVFIQGKRYNLADVSAAVCMSLGLIWFTLADSTIAPNF NLTGVMLISLALCADAVIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLSCTSGLGPALAF CSKNPVRTYGYAFLFSLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTIVLSFLFFAKPFTFQ YIWSGLLVVLGIFLNVYSKNMDKIRLPSVYSVIKKAMDMKKSRTLAQTV hide sequence

RefSeq Acc Id:	XP_006253917 ⟸ XM_006253855
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6ACP7 (UniProtKB/TrEMBL), A6J795 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDLKFNNSRKYVSITVPSKTQTMSPHIKSVEDVVVLGVNLSRFKKLTQFLICVAGVFVFYLIYG YLQELIFSMEGFKPYGWYLTLVQFAFYSVFGLIELQLTQDKRRRIPGKTYMIIAFLTVGTMGLS NTSLGYLNYPTQVIFKCCKLIPVMLGGVFIQGKRYNLADVSAAVCMSLGLIWFTLADSTIAPNF NLTGVMLISLALCADAVIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLSCTSGLGPALAF CSKNPVRTYGYAFLFSLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTIVLSFLFFAKPFTFQ YIWSGLLVVLGIFLNVYSKNMDKIRLPSVYSVIKKAMDMKKSRTLAQTV hide sequence

Ensembl Acc Id:

ENSRNOP00000021670 ⟸ ENSRNOT00000021669

RefSeq Acc Id:	XP_038952393 ⟸ XM_039096465
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038952392 ⟸ XM_039096464
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038952395 ⟸ XM_039096467
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_038952390 ⟸ XM_039096462
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038952394 ⟸ XM_039096466
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038952391 ⟸ XM_039096463
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038952396 ⟸ XM_039096468
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_038952397 ⟸ XM_039096469
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_038952398 ⟸ XM_039096470
- Peptide Label:	isoform X13

RefSeq Acc Id:	XP_038952399 ⟸ XM_039096471
- Peptide Label:	isoform X13

Ensembl Acc Id:

ENSRNOP00000089959 ⟸ ENSRNOT00000112405

RefSeq Acc Id:	NP_001100816 ⟸ NM_001107346
- UniProtKB:	A0A8I6ACP7 (UniProtKB/TrEMBL), A6J795 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132459 ⟸ XM_063276389
- Peptide Label:	isoform X12

RefSeq Acc Id:	XP_063132457 ⟸ XM_063276387
- Peptide Label:	isoform X6
- UniProtKB:	A6J797 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132458 ⟸ XM_063276388
- Peptide Label:	isoform X10

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4AAG3-F1-model_v2	AlphaFold	D4AAG3	1-411	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307183	AgrOrtholog
BioCyc Gene	G2FUF-9697	BioCyc
Ensembl Genes	ENSRNOG00000016174	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000021669	ENTREZGENE
	ENSRNOT00000021669.8	UniProtKB/TrEMBL
	ENSRNOT00000112405	ENTREZGENE
	ENSRNOT00000112405.2	UniProtKB/TrEMBL
InterPro	UAA	UniProtKB/TrEMBL
NCBI Gene	306866	ENTREZGENE
PANTHER	ADENOSINE 3'-PHOSPHO 5'-PHOSPHOSULFATE TRANSPORTER 2	UniProtKB/TrEMBL
	PTHR10778	UniProtKB/TrEMBL
Pfam	UAA	UniProtKB/TrEMBL
PhenoGen	Slc35b3	PhenoGen
RatGTEx	ENSRNOG00000016174	RatGTEx
UniProt	A0A8I6ACP7	ENTREZGENE, UniProtKB/TrEMBL
	A6J795	ENTREZGENE, UniProtKB/TrEMBL
	A6J797	ENTREZGENE, UniProtKB/TrEMBL
	D4AAG3	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-02-24	Slc35b3	solute carrier family 35 member B3	Slc35b3	solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2013-08-02	Slc35b3	solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3	Slc35b3	solute carrier family 35, member B3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Slc35b3	solute carrier family 35, member B3	Slc35b3_predicted	solute carrier family 35, member B3 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Slc35b3_predicted	solute carrier family 35, member B3 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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