Rev3l (REV3 like, DNA directed polymerase zeta catalytic subunit) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Rev3l (REV3 like, DNA directed polymerase zeta catalytic subunit) Rattus norvegicus
Analyze
Symbol: Rev3l
Name: REV3 like, DNA directed polymerase zeta catalytic subunit
RGD ID: 1307087
Description: Predicted to enable DNA-directed DNA polymerase activity. Predicted to be involved in double-strand break repair via homologous recombination and error-prone translesion synthesis. Predicted to act upstream of or within DNA repair. Predicted to be located in nucleolus. Predicted to be part of zeta DNA polymerase complex. Predicted to be active in nucleus. Orthologous to human REV3L (REV3 like, DNA directed polymerase zeta catalytic subunit); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: DNA polymerase zeta catalytic subunit; LOC309812; REV3-like, catalytic subunit of DNA polymerase zeta; REV3-like, catalytic subunit of DNA polymerase zeta (yeast); REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae); REV3-like, polymerase (DNA directed), zeta, catalytic subunit
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82044,686,482 - 44,844,668 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2044,686,940 - 44,844,668 (+)EnsemblGRCr8
mRatBN7.22043,131,841 - 43,290,102 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2043,132,363 - 43,290,099 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2044,881,370 - 45,039,095 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02044,540,590 - 44,698,307 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02045,282,589 - 45,439,937 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02044,803,664 - 44,961,362 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2044,803,666 - 44,961,382 (+)Ensemblrn6Rnor6.0
Rnor_5.02046,526,297 - 46,683,995 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42043,870,509 - 44,042,379 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2043,847,724 - 44,003,783 (+)NCBICelera
RGSC_v3.12043,859,781 - 44,064,417 (+)NCBI
Cytogenetic Map20q12NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-dinitrotoluene  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxynon-2-enal  (ISO)
6-propyl-2-thiouracil  (EXP)
acrylamide  (EXP)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (EXP)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
carbamazepine  (ISO)
cisplatin  (ISO)
clobetasol  (ISO)
clorgyline  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
curcumin  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diazinon  (ISO)
Dibutyl phosphate  (ISO)
diclofenac  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
ethyl methanesulfonate  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
FR900359  (ISO)
furan  (EXP)
genistein  (ISO)
gentamycin  (EXP)
indometacin  (ISO)
lead(0)  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
melphalan  (ISO)
mercury dibromide  (ISO)
methimazole  (EXP)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
miconazole  (ISO)
oxaliplatin  (EXP)
p-chloromercuribenzoic acid  (ISO)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenylephrine  (EXP)
phenylmercury acetate  (ISO)
potassium chromate  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
progesterone  (ISO)
quercetin  (ISO)
SB 431542  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sodium fluoride  (ISO)
succimer  (ISO)
sulfadimethoxine  (EXP)
tamibarotene  (ISO)
titanium dioxide  (ISO)
topotecan  (EXP)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
tungsten  (ISO)
valproic acid  (EXP,ISO)
vincaleukoblastine  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nuclear lumen  (IEA)
nucleolus  (IEA,ISO)
nucleus  (IBA,IEA)
site of DNA damage  (IEA,ISO)
zeta DNA polymerase complex  (IBA,IEA,ISO)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11884603   PMID:12477932   PMID:16129783   PMID:20164194   PMID:20184619   PMID:22465957   PMID:30361391  


Genomics

Comparative Map Data
Rev3l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82044,686,482 - 44,844,668 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2044,686,940 - 44,844,668 (+)EnsemblGRCr8
mRatBN7.22043,131,841 - 43,290,102 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2043,132,363 - 43,290,099 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2044,881,370 - 45,039,095 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02044,540,590 - 44,698,307 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02045,282,589 - 45,439,937 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02044,803,664 - 44,961,362 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2044,803,666 - 44,961,382 (+)Ensemblrn6Rnor6.0
Rnor_5.02046,526,297 - 46,683,995 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42043,870,509 - 44,042,379 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2043,847,724 - 44,003,783 (+)NCBICelera
RGSC_v3.12043,859,781 - 44,064,417 (+)NCBI
Cytogenetic Map20q12NCBI
REV3L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386111,299,033 - 111,483,711 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6111,299,028 - 111,483,715 (-)Ensemblhg38GRCh38
GRCh376111,620,236 - 111,804,914 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366111,726,927 - 111,911,107 (-)NCBIBuild 36Build 36hg18NCBI36
Build 346111,726,970 - 111,911,611NCBI
Celera6112,366,790 - 112,550,978 (-)NCBICelera
Cytogenetic Map6q21NCBI
HuRef6109,191,596 - 109,375,603 (-)NCBIHuRef
CHM1_16111,883,120 - 112,067,318 (-)NCBICHM1_1
T2T-CHM13v2.06112,482,123 - 112,666,710 (-)NCBIT2T-CHM13v2.0
Rev3l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391039,607,557 - 39,751,207 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1039,608,114 - 39,751,207 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381039,731,561 - 39,875,211 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1039,732,118 - 39,875,211 (+)Ensemblmm10GRCm38
MGSCv371039,451,966 - 39,595,012 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361039,421,576 - 39,564,622 (+)NCBIMGSCv36mm8
Celera1040,600,172 - 40,761,113 (+)NCBICelera
Cytogenetic Map10B1NCBI
cM Map1021.04NCBI
Rev3l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541136,067,022 - 36,246,517 (-)Ensembl
ChiLan1.0NW_00495541136,068,248 - 36,246,607 (-)NCBIChiLan1.0ChiLan1.0
REV3L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25131,309,955 - 131,497,271 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16129,195,899 - 129,382,831 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06109,104,341 - 109,291,268 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16113,181,753 - 113,367,822 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6113,181,759 - 113,367,625 (-)EnsemblpanPan2panpan1.1
REV3L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11267,776,285 - 67,953,337 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1267,756,924 - 67,953,553 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1267,596,234 - 67,773,130 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01268,658,181 - 68,835,553 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1268,658,196 - 68,835,475 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11268,009,637 - 68,186,705 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01267,856,181 - 68,033,301 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01268,182,109 - 68,359,228 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Rev3l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946102,833,688 - 102,990,853 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493667965,769 - 222,984 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493667965,852 - 183,820 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
REV3L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl177,197,409 - 77,400,297 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1177,196,592 - 77,400,551 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2186,816,845 - 86,862,016 (-)NCBISscrofa10.2Sscrofa10.2susScr3
REV3L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11362,400,241 - 62,586,645 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1362,399,745 - 62,586,647 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604034,704,266 - 34,893,026 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rev3l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624933642,600 - 855,656 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_004624933641,874 - 852,325 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Rev3l
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11839,535,642 - 39,691,188 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Rev3l
727 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:174
Count of miRNA genes:105
Interacting mature miRNAs:134
Transcripts:ENSRNOT00000057227
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303587Bw93Body weight QTL 9313body mass (VT:0001259)body weight (CMO:0000012)202668936256021148Rat
4889610Pancm3Pancreatic morphology QTL 33.750.001pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)20418947649189476Rat
1598858Cm61Cardiac mass QTL 613.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)20821635953216359Rat
2305926Iddm37Insulin dependent diabetes mellitus QTL 376blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)20153308346533083Rat
1331747Hrtrt16Heart rate QTL 163.163heart pumping trait (VT:2000009)heart rate (CMO:0000002)202679235356021148Rat
1598816Memor12Memory QTL 122.4exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)201224324249189476Rat
2303578Gluco50Glucose level QTL 502blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)202668936256021148Rat
2303626Vencon10Ventilatory control QTL 100.001respiration trait (VT:0001943)respiration rate (CMO:0000289)202074558556021148Rat
1598869Memor6Memory QTL 63.1exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)202668936256021148Rat
1598870Bp289Blood pressure QTL 2892.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)20821635953216359Rat
70158Bp60Blood pressure QTL 603arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)203215696745978663Rat
2300188Bmd68Bone mineral density QTL 686.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)202668936256021148Rat

Markers in Region
RH142270  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22043,289,629 - 43,289,784 (+)MAPPERmRatBN7.2
Rnor_6.02044,960,893 - 44,961,047NCBIRnor6.0
Rnor_5.02046,683,526 - 46,683,680UniSTSRnor5.0
RGSC_v3.42044,041,910 - 44,042,064UniSTSRGSC3.4
Celera2044,003,314 - 44,003,468UniSTS
RH 3.4 Map20464.4UniSTS
Cytogenetic Map20q12UniSTS
BF390947  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22043,210,596 - 43,210,803 (+)MAPPERmRatBN7.2
Rnor_6.02044,881,716 - 44,881,922NCBIRnor6.0
Rnor_5.02046,604,349 - 46,604,555UniSTSRnor5.0
RGSC_v3.42043,962,655 - 43,962,861UniSTSRGSC3.4
Celera2043,924,324 - 43,924,530UniSTS
RH 3.4 Map20462.7UniSTS
Cytogenetic Map20q12UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 164 91 90 59 92 59 6 356 192 11 143 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000057227   ⟹   ENSRNOP00000054053
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2044,686,940 - 44,844,668 (+)Ensembl
mRatBN7.2 Ensembl2043,132,363 - 43,290,099 (+)Ensembl
Rnor_6.0 Ensembl2044,803,666 - 44,961,362 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000077936   ⟹   ENSRNOP00000073858
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl2044,803,885 - 44,961,382 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000131491   ⟹   ENSRNOP00000104523
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2044,686,940 - 44,827,126 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000152978   ⟹   ENSRNOP00000112650
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2044,686,940 - 44,844,668 (+)Ensembl
RefSeq Acc Id: NM_001083966   ⟹   NP_001077435
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82044,686,940 - 44,844,668 (+)NCBI
mRatBN7.22043,132,363 - 43,290,099 (+)NCBI
Rnor_6.02044,803,666 - 44,961,362 (+)NCBI
Rnor_5.02046,526,297 - 46,683,995 (+)NCBI
RGSC_v3.42043,870,509 - 44,042,379 (+)RGD
Celera2043,847,724 - 44,003,783 (+)RGD
Sequence:
RefSeq Acc Id: XM_006256524   ⟹   XP_006256586
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82044,686,484 - 44,844,666 (+)NCBI
mRatBN7.22043,131,843 - 43,290,102 (+)NCBI
Rnor_6.02044,803,664 - 44,961,360 (+)NCBI
Rnor_5.02046,526,297 - 46,683,995 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006256525   ⟹   XP_006256587
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82044,696,940 - 44,844,666 (+)NCBI
mRatBN7.22043,142,367 - 43,290,090 (+)NCBI
Rnor_6.02044,804,034 - 44,961,360 (+)NCBI
Rnor_5.02046,526,297 - 46,683,995 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063279173   ⟹   XP_063135243
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82044,686,482 - 44,825,249 (+)NCBI
RefSeq Acc Id: XR_005497269
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82044,686,482 - 44,819,936 (+)NCBI
mRatBN7.22043,131,841 - 43,265,476 (+)NCBI
RefSeq Acc Id: XR_362259
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82044,686,482 - 44,831,270 (+)NCBI
mRatBN7.22043,131,841 - 43,280,776 (+)NCBI
Rnor_6.02044,803,664 - 44,952,039 (+)NCBI
Rnor_5.02046,526,297 - 46,683,995 (+)NCBI
Sequence:
RefSeq Acc Id: NP_001077435   ⟸   NM_001083966
- UniProtKB: F1M8G6 (UniProtKB/TrEMBL),   A6KIH1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006256586   ⟸   XM_006256524
- Peptide Label: isoform X1
- UniProtKB: A6KIH1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006256587   ⟸   XM_006256525
- Peptide Label: isoform X2
- UniProtKB: A6KIH1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000054053   ⟸   ENSRNOT00000057227
Ensembl Acc Id: ENSRNOP00000073858   ⟸   ENSRNOT00000077936
RefSeq Acc Id: XP_063135243   ⟸   XM_063279173
- Peptide Label: isoform X3
- UniProtKB: A6KIH1 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000112650   ⟸   ENSRNOT00000152978
Ensembl Acc Id: ENSRNOP00000104523   ⟸   ENSRNOT00000131491
Protein Domains
C4-type zinc-finger of DNA polymerase delta   DNA polymerase delta/zeta catalytic subunit N-   DNA-directed DNA polymerase family B   DNA-directed DNA polymerase family B exonuclease   DUF4683

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307087 AgrOrtholog
BioCyc Gene G2FUF-3465 BioCyc
Ensembl Genes ENSRNOG00000000593 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000057227 ENTREZGENE
  ENSRNOT00000057227.5 UniProtKB/TrEMBL
  ENSRNOT00000131491 ENTREZGENE
  ENSRNOT00000131491.1 UniProtKB/TrEMBL
  ENSRNOT00000152978 ENTREZGENE
  ENSRNOT00000152978.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.132.60 UniProtKB/TrEMBL
  3.30.420.10 UniProtKB/TrEMBL
  3.90.1600.10 UniProtKB/TrEMBL
  DNA Polymerase, chain B, domain 1 UniProtKB/TrEMBL
  Helix hairpin bin UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7301434 IMAGE-MGC_LOAD
InterPro DNA-dir_DNA_pol_B UniProtKB/TrEMBL
  DNA-dir_DNA_pol_B_CS UniProtKB/TrEMBL
  DNA-dir_DNA_pol_B_exonuc UniProtKB/TrEMBL
  DNA-dir_DNA_pol_B_multi_dom UniProtKB/TrEMBL
  DNA/RNA_pol_sf UniProtKB/TrEMBL
  DNA_pol_B_C UniProtKB/TrEMBL
  DNA_pol_palm_dom UniProtKB/TrEMBL
  DPOD/Z_N UniProtKB/TrEMBL
  DUF4683 UniProtKB/TrEMBL
  PolZ_Rev3 UniProtKB/TrEMBL
  REV3_N UniProtKB/TrEMBL
  RNaseH-like_dom UniProtKB/TrEMBL
  RNaseH_sf UniProtKB/TrEMBL
  zf-C4pol UniProtKB/TrEMBL
KEGG Report rno:309812 UniProtKB/TrEMBL
MGC_CLONE MGC:105929 IMAGE-MGC_LOAD
NCBI Gene 309812 ENTREZGENE
PANTHER DNA POLYMERASE ZETA CATALYTIC SUBUNIT UniProtKB/TrEMBL
  PTHR45812 UniProtKB/TrEMBL
Pfam DNA_pol_B UniProtKB/TrEMBL
  DNA_pol_B_exo1 UniProtKB/TrEMBL
  DUF4683 UniProtKB/TrEMBL
  POL3_N UniProtKB/TrEMBL
  REV3_N UniProtKB/TrEMBL
  zf-C4pol UniProtKB/TrEMBL
PhenoGen Rev3l PhenoGen
PRINTS DNAPOLB UniProtKB/TrEMBL
PROSITE DNA_POLYMERASE_B UniProtKB/TrEMBL
RatGTEx ENSRNOG00000000593 RatGTEx
SMART POLBc UniProtKB/TrEMBL
Superfamily-SCOP RNaseH_fold UniProtKB/TrEMBL
  SSF56672 UniProtKB/TrEMBL
UniProt A0ABK0LJB3_RAT UniProtKB/TrEMBL
  A0ABK0M5G1_RAT UniProtKB/TrEMBL
  A6KIH1 ENTREZGENE, UniProtKB/TrEMBL
  F1M8G6 ENTREZGENE, UniProtKB/TrEMBL
  Q5RJZ4_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-13 Rev3l  REV3 like, DNA directed polymerase zeta catalytic subunit  Rev3l  REV3-like, polymerase (DNA directed), zeta, catalytic subunit  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-10-10 Rev3l  REV3-like, polymerase (DNA directed), zeta, catalytic subunit  Rev3l  REV3-like, catalytic subunit of DNA polymerase zeta (yeast)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-11-04 Rev3l  REV3-like, catalytic subunit of DNA polymerase zeta (yeast)  Rev3l  REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Rev3l  REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)  Rev3l_predicted  REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae) (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Rev3l_predicted  REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae) (predicted)      Symbol and Name status set to approved 70820 APPROVED